BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZF08RM1.SCF screened BAC_end (901 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1590 954 0.0 >3x_Contig1590 Length = 13653 Score = 954 bits (481), Expect = 0.0 Identities = 615/647 (95%), Gaps = 12/647 (1%) Strand = Plus / Plus Query: 47 cattggtaacggcgccatttgatttcgatttcttctggaatccgaatcgtattttcgtca 106 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12401 cattggtaacggc-ccatttgatttcgatttcttctggaatccgaatcgtattttcgtca 12459 Query: 107 ttgatgttgacgatatccaagttaaagtggccggtgccttgcaaatttttcaccgtttgc 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12460 ttgatgttgacgatatccaagttaaagtggccggtgccttgcaaatttttcaccgtttgc 12519 Query: 167 tctctaatcaaaagcatattgataatcgattcccaatctccctcacgatctgcttcatca 226 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 12520 tctctaatcaaaagcatattgataatcgattcccaatctccctcacgatctgcttcagca 12579 Query: 227 acgctttgttttggcactagactagtgaataaataatcatcgagcaattgatcaacttta 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12580 acgctttgttttggcactagactagtgaataaataatcatcgagcaattgatcaacttta 12639 Query: 287 tcgattaaactcttgaaatccttaccaaatttgtacttggtcaaagtcttttcgaaacca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12640 tcgattaaactcttgaaatccttaccaaatttgtacttggtcaaagtcttttcgaaacca 12699 Query: 347 ctagatgttggtttggttccataaacctttaacaaatgtggtgtttcgatgaatttaaca 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12700 ctagatgttggtttggttccataaacctttaacaaatgtggtgtttcgatgaatttaaca 12759 Query: 407 gtgaaccaattgaacatcgtccatgtagtggctaaccagagattccaatttgaaaaattg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12760 gtgaaccaattgaacatcgtccatgtagtggctaaccagagattccaatttgaaaaattg 12819 Query: 467 ttaattaagacggtcccccatatacctggcacaccaaacacacgctcaggattattcaag 526 |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 12820 ttaattaagacggtcccccagatacctgcaacaccaaacacacgctcaggattattcaag 12879 Query: 527 tatctataaata-catccgtcttcaattt-cttttgtcaa-taaaataggtaggaag-aa 582 |||||||||||| |||| |||||||||| |||||||||| |||| ||||||||||| || Sbjct: 12880 tatctataaataccatcgttcttcaatttccttttgtcaattaaattaggtaggaagaaa 12939 Query: 583 tcaccct-taaccagcccaat--ttttatactttgg-agatctcatggttg-accaaatt 637 ||||| | |||||||| ||| ||| ||||| ||| |||||||| |||| |||||||| Sbjct: 12940 tcaccataaaaccagccaaattctttaatactatggaagatctcagtgttgcaccaaatt 12999 Query: 638 ggattaccca--cacaacaacccaaagtttattgtattggaactacc 682 || || ||| |||||||||||||| ||||||||||| ||||||| Sbjct: 13000 tgaatagccaacaacaacaacccaaaggttattgtattgtaactacc 13046 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8110 Number of Sequences: 1807 Number of extensions: 8110 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 901 length of database: 10,358,551 effective HSP length: 16 effective length of query: 885 effective length of database: 10,329,639 effective search space: 9141730515 effective search space used: 9141730515 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)