BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZF09RM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1715 1223 0.0 >3x_Contig1715 Length = 16241 Score = 1223 bits (617), Expect = 0.0 Identities = 714/737 (96%), Gaps = 7/737 (0%) Strand = Plus / Minus Query: 52 ctttatcaagtcctaatgttgattttcgctactacttagattgccatggttttttttgaa 111 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16225 ctttatcaag-cctaatgttgattttcgctactacttagattgccatggttttttttgaa 16167 Query: 112 cgtcaatgcaaattagtaatgctcttttcaggcattgtactaaaccttctcagcaagacc 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16166 cgtcaatgcaaattagtaatgctcttttcaggcattgtactaaaccttctcagcaagacc 16107 Query: 172 cacaagttggcaactgatattgattaagtgggtgatatttcttatatgaataatgttttt 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16106 cacaagttggcaactgatattgattaagtgggtgatatttcttatatgaataatgttttt 16047 Query: 232 tatatgtgtgttaatggtacgctccaacgtatataaatgcggcattttacatatttcatc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16046 tatatgtgtgttaatggtacgctccaacgtatataaatgcggcattttacatatttcatc 15987 Query: 292 tccattcccctaaatttcatctcatcttaattaaaagcttcctatttctttcaattaaag 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15986 tccattcccctaaatttcatctcatcttaattaaaagcttcctatttctttcaattaaag 15927 Query: 352 gtttaaacagtaaggaatatcaatagttagtgttcagtgtagcattgcagtcaattgatt 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15926 gtttaaacagtaaggaatatcaatagttagtgttcagtgtagcattgcagtcaattgatt 15867 Query: 412 atccaccaaagtttttagtacatcgaataatagaaaagcatgccatctccaagcgactac 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15866 atccaccaaagtttttagtacatcgaataatagaaaagcatgccatctccaagcgactac 15807 Query: 472 cgttctcaattgcttaataacgtagccctaggatatggtttgatgagtttcacctggaga 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15806 cgttctcaattgcttaataacgtagccctaggatatggtttgatgagtttcacctggaga 15747 Query: 532 gcagaacctattgccccagaagctgcgtccaaaaccttcaagatagttcttgaatttact 591 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 15746 gcagaacctattgccccagaagctgcgtccaaaaccttcaagaaagttcttgaatttact 15687 Query: 592 gggtgat-aaaaggcgttgttcaatgtttggtgaattctacggtgaaacctttgaggcac 650 |||||| |||||||||||||||||| |||||||||||||||||| |||||||||| || Sbjct: 15686 -ggtgataaaaaggcgttgttcaatg-ttggtgaattctacggtg-aacctttgagcaac 15630 Query: 651 tacaagttgttgcattcctactttgtacagtatccggaagatcgtgaaaaagtaattatc 710 |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 15629 tacaagttgttgcaatcctactttgacaagtatccggaagatcgtgaaaaggtaattatc 15570 Query: 711 agtgctaaaagtgctgttgaactgcaaaccttgacccca-cccgtgatgctaaga-tgtt 768 ||||||||| |||||||||| |||||||||||| |||| || |||||||||||| |||| Sbjct: 15569 agtgctaaaggtgctgttgacttgcaaaccttgagcccagccggtgatgctaagagtgtt 15510 Query: 769 tgcccatctttcgaaaa 785 || ||||| ||||||| Sbjct: 15509 agcgcatctatcgaaaa 15493 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6991 Number of Sequences: 1807 Number of extensions: 6991 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)