BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZF10RM1.SCF screened BAC_end (970 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1696 1164 0.0 >3x_Contig1696 Length = 16725 Score = 1164 bits (587), Expect = 0.0 Identities = 652/666 (97%), Gaps = 7/666 (1%) Strand = Plus / Plus Query: 56 aatactatcgatgggcagaaaaattcaaaaccgttgcc-catgagcgtaaagaagacaag 114 ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 10062 aatactagcgatgggcagaaaaattcagaaccgttgccacatgagcgtaaagaagacaag 10121 Query: 115 gtagccagaaatactgatgttaatgttacaggtggaaaaggacaaaataatgtgaaatca 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10122 gtagccagaaatactgatgttaatgttacaggtggaaaaggacaaaataatgtgaaatca 10181 Query: 175 gtacatcaaaatcccggaggacctcaaagggcgtcaccaagtccgtctcgttctaaccgc 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10182 gtacatcaaaatcccggaggacctcaaagggcgtcaccaagtccgtctcgttctaaccgc 10241 Query: 235 aacaacaatcactcaataactgatacaaggcgtggaccgtcgcatgcggactatgcgaat 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10242 aacaacaatcactcaataactgatacaaggcgtggaccgtcgcatgcggactatgcgaat 10301 Query: 295 cagagaaagcaggattcgagaagaggtccggctccgccagtgaatcagcatacctctaga 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10302 cagagaaagcaggattcgagaagaggtccggctccgccagtgaatcagcatacctctaga 10361 Query: 355 tatggaaaaagtcccagacaggataacagggaaaggcaaagtcgattccagagaaatgat 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10362 tatggaaaaagtcccagacaggataacagggaaaggcaaagtcgattccagagaaatgat 10421 Query: 415 tcatcaatatctaaaccggcattcaacagtgacaacagcttccagcagaacagagggcat 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10422 tcatcaatatctaaaccggcattcaacagtgacaacagcttccagcagaacagagggcat 10481 Query: 475 gaagtgcgcaacggtaggtttgacaacaaaaatagatggtctgatgcaagtaatgcctct 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10482 gaagtgcgcaacggtaggtttgacaacaaaaatagatggtctgatgcaagtaatgcctct 10541 Query: 535 cattcgcggaataccaacttacaggtcaaaaacaatcaagcagatgattcagaaggccat 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10542 cattcgcggaataccaacttacaggtcaaaaacaatcaagcagatgattcagaaggccat 10601 Query: 595 aactttcgtaaacctacagagtggaagaaagatctgtctcataacacacgtgggacgttt 654 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10602 aactttcgtaaacctacagagtggaagaaagatctgtctcataacacacgtgg-acgttt 10660 Query: 655 ccaaacctaacaaaaacaggttttgggcttgcttcaaccgggaaagggtttaggacaaaa 714 | || |||||||||||||||||| |||| |||| ||| ||| || ||| |||||||||| Sbjct: 10661 cgaa-cctaacaaaaacaggttt-gggcatgct-caagcggaaa--ggtataggacaaaa 10715 Query: 715 accccc 720 |||||| Sbjct: 10716 accccc 10721 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6551 Number of Sequences: 1807 Number of extensions: 6551 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 970 length of database: 10,358,551 effective HSP length: 16 effective length of query: 954 effective length of database: 10,329,639 effective search space: 9854475606 effective search space used: 9854475606 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)