BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZG03RM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig853 1243 0.0 >3x_Contig853 Length = 2329 Score = 1243 bits (627), Expect = 0.0 Identities = 725/751 (96%), Gaps = 5/751 (0%) Strand = Plus / Minus Query: 62 tgatgttgtataaatcggtacacagttggtagaattggtagaaaccccagcagattcttg 121 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 tgatgttgtagaaatcggtacacagttggtagaattggtagaaaccccagcagattcttg 1010 Query: 122 ccaagaagaagatcaagatcaaaacgacattgttcaccaattggatcacgttacacacct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 ccaagaagaagatcaagatcaaaacgacattgttcaccaattggatcacgttacacacct 950 Query: 182 tggccatgacagtctgacagtctttggtcagttgtggcaagtacttgatcccgaaccatc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 949 tggccatgacagtctgacagtctttggtcagttgtggcaagtacttgatcccgaaccatc 890 Query: 242 tgatattcaagaatggattggatagctcgaacatcaggaaaatacctgcgtagtagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 tgatattcaagaatggattggatagctcgaacatcaggaaaatacctgcgtagtagttga 830 Query: 302 tgtaaggttttaaaccaatagcataaaccaccgtagagatcaaaccgtgcagcacgaatg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 tgtaaggttttaaaccaatagcataaaccaccgtagagatcaaaccgtgcagcacgaatg 770 Query: 362 ggagggtagagtagaccaatgaaatgtagatatcccataggaagtacccaattgcgaaaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 ggagggtagagtagaccaatgaaatgtagatatcccataggaagtacccaattgcgaaaa 710 Query: 422 cgcataccttcacgttatatgggtccatgccaaagatacgatcgtgagagtttagatctg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 cgcataccttcacgttatatgggtccatgccaaagatacgatcgtgagagtttagatctg 650 Query: 482 gtttttcattgttatatgcaatggcctcgaaactgagataaagcacgatcagagattgga 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gtttttcattgttatatgcaatggcctcgaaactgagataaagcacgatcagagattgga 590 Query: 542 tccaactcaccagacgaacggcactctggttgacaaggtctgcatgctgcttttccttag 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 tccaactcaccagacgaacggcactctggttgacaaggtctgcatgctgcttttccttag 530 Query: 602 acttacgttgggtcttcgtagtcttcggatccccaggat-acctattagaagctagaagt 660 ||||||||||| |||||||||| ||||| |||||||| |||||| |||||||||| || Sbjct: 529 acttacgttggtctttcgtagtctccggat-cccaggataacctataagaagctagaggt 471 Query: 661 ggggaataagacccgttgagatatcaggaattgcgcatgatacccgacgggcatgtacaa 720 |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||| Sbjct: 470 -gggaataagacccgttgagataacaggaatagcgcatgatacccgacggcaatgtacaa 412 Query: 721 cacagggtgtaaattgaatag-atcacatttcgagt-atccatccattgaattcgagata 778 ||||| |||||||||| |||| |||||||| ||| |||||||||||| |||||||||| Sbjct: 411 cacagtgtgtaaattggatagaatcacattcgaagtaatccatccattggattcgagata 352 Query: 779 tgggatcacgttcttcgtcaaatgaaggtgc 809 ||||||||||| || ||||||||| ||||| Sbjct: 351 tgggatcacgtactcggtcaaatgagggtgc 321 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5747 Number of Sequences: 1807 Number of extensions: 5747 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)