BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZG04FM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1445                                                        1489   0.0  

>3x_Contig1445 
          Length = 8432

 Score = 1489 bits (751), Expect = 0.0
 Identities = 826/841 (98%), Gaps = 9/841 (1%)
 Strand = Plus / Plus

                                                                        
Query: 86   tcatttacattgtcggaaatacaggtcttggcggattaccgtagtagtattgtttctgtg 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2486 tcatttacattgtcggaaatacaggtcttggcggattaccgtagtagtattgtttctgtg 2545

                                                                        
Query: 146  ccatgttattgaacacttagtcatattattacttgggcttggggctcggctaacgatctc 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2546 ccatgttattgaacacttagtcatattattacttgggcttggggctcggctaacgatctc 2605

                                                                        
Query: 206  ccccaatctcagtcacagcagtgcgagattatagatacatgcgaatcgttattgggtgtt 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2606 ccccaatctcagtcacagcagtgcgagattatagatacatgcgaatcgttattgggtgtt 2665

                                                                        
Query: 266  ttcttttgagaatgtcggtagtatggcggtgagtcacgtgatactaacaatcaaccacta 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2666 ttcttttgagaatgtcggtagtatggcggtgagtcacgtgatactaacaatcaaccacta 2725

                                                                        
Query: 326  gtgtgaaaacaaaaaagaacaaggataaggcaaaaaggcaacaggcaaagacaaccttgg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2726 gtgtgaaaacaaaaaagaacaaggataaggcaaaaaggcaacaggcaaagacaaccttgg 2785

                                                                        
Query: 386  ctgcttcggccggaagttgagaatcaggtgtagtgtgtatatgtctagttcacggctgat 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2786 ctgcttcggccggaagttgagaatcaggtgtagtgtgtatatgtctagttcacggctgat 2845

                                                                        
Query: 446  aaatacattttcgacaaattacaataataataataataataataaatacacggtttagct 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2846 aaatacattttcgacaaattacaataataataataataataataaatacacggtttagct 2905

                                                                        
Query: 506  tacgtgataaattaaggcagcaacaacaatgagctcggaggaagagtatatattggtcac 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2906 tacgtgataaattaaggcagcaacaacaatgagctcggaggaagagtatatattggtcac 2965

                                                                        
Query: 566  tgagtgttaagaacttaaaaaaaaaaaaaggacagtgtttttcaccatacttgagcctct 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2966 tgagtgttaagaacttaaaaaaaaaaaaaggacagtgtttttcaccatacttgagcctct 3025

                                                                        
Query: 626  tcgaaatagtcaactctgtatttggaaacatctaagttgtttgccactgtatctctgatt 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3026 tcgaaatagtcaactctgtatttggaaacatctaagttgtttgccactgtatctctgatt 3085

                                                                        
Query: 686  tgatcgttcattggtcctggaccgcaactcanaattgctgtagaaccaatagcgttgtga 745
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3086 tgatcgttcattggtcctggaccgcaactcaaaattgctgtagaaccaatagcgttgtga 3145

                                                                        
Query: 746  agatcttccacaattaaggattgtaagtctggtctaccgaataagaagtttattctggaa 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3146 agatcttccacaattaaggattgtaagtctggtctaccgaataagaagtttattctggaa 3205

                                                                        
Query: 806  aaaatgcttgaaaaaattgatttcgcaatctttgagttgattctttgnacgtcgagtttt 865
            ||  |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 3206 aat-tgcttgaaaaaattgatttcgcaatctt-gagttgattctttg-acgtcgagtttc 3262

                                                                        
Query: 866  ctttttcaaaagtctgtttcgcccagcagtagaacgcagaaggaatctacgatttgctgt 925
              |||||| | |||||||||||| |||||  || |||||||| |||||||||||||||||
Sbjct: 3263 --ttttcaga-gtctgtttcgcc-agcagatga-cgcagaag-aatctacgatttgctgt 3316

             
Query: 926  g 926
            |
Sbjct: 3317 g 3317


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,543
Number of Sequences: 1807
Number of extensions: 15543
Number of successful extensions: 579
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)