BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZG04FM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1445 1489 0.0 >3x_Contig1445 Length = 8432 Score = 1489 bits (751), Expect = 0.0 Identities = 826/841 (98%), Gaps = 9/841 (1%) Strand = Plus / Plus Query: 86 tcatttacattgtcggaaatacaggtcttggcggattaccgtagtagtattgtttctgtg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2486 tcatttacattgtcggaaatacaggtcttggcggattaccgtagtagtattgtttctgtg 2545 Query: 146 ccatgttattgaacacttagtcatattattacttgggcttggggctcggctaacgatctc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2546 ccatgttattgaacacttagtcatattattacttgggcttggggctcggctaacgatctc 2605 Query: 206 ccccaatctcagtcacagcagtgcgagattatagatacatgcgaatcgttattgggtgtt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2606 ccccaatctcagtcacagcagtgcgagattatagatacatgcgaatcgttattgggtgtt 2665 Query: 266 ttcttttgagaatgtcggtagtatggcggtgagtcacgtgatactaacaatcaaccacta 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2666 ttcttttgagaatgtcggtagtatggcggtgagtcacgtgatactaacaatcaaccacta 2725 Query: 326 gtgtgaaaacaaaaaagaacaaggataaggcaaaaaggcaacaggcaaagacaaccttgg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2726 gtgtgaaaacaaaaaagaacaaggataaggcaaaaaggcaacaggcaaagacaaccttgg 2785 Query: 386 ctgcttcggccggaagttgagaatcaggtgtagtgtgtatatgtctagttcacggctgat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2786 ctgcttcggccggaagttgagaatcaggtgtagtgtgtatatgtctagttcacggctgat 2845 Query: 446 aaatacattttcgacaaattacaataataataataataataataaatacacggtttagct 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2846 aaatacattttcgacaaattacaataataataataataataataaatacacggtttagct 2905 Query: 506 tacgtgataaattaaggcagcaacaacaatgagctcggaggaagagtatatattggtcac 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2906 tacgtgataaattaaggcagcaacaacaatgagctcggaggaagagtatatattggtcac 2965 Query: 566 tgagtgttaagaacttaaaaaaaaaaaaaggacagtgtttttcaccatacttgagcctct 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2966 tgagtgttaagaacttaaaaaaaaaaaaaggacagtgtttttcaccatacttgagcctct 3025 Query: 626 tcgaaatagtcaactctgtatttggaaacatctaagttgtttgccactgtatctctgatt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3026 tcgaaatagtcaactctgtatttggaaacatctaagttgtttgccactgtatctctgatt 3085 Query: 686 tgatcgttcattggtcctggaccgcaactcanaattgctgtagaaccaatagcgttgtga 745 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3086 tgatcgttcattggtcctggaccgcaactcaaaattgctgtagaaccaatagcgttgtga 3145 Query: 746 agatcttccacaattaaggattgtaagtctggtctaccgaataagaagtttattctggaa 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3146 agatcttccacaattaaggattgtaagtctggtctaccgaataagaagtttattctggaa 3205 Query: 806 aaaatgcttgaaaaaattgatttcgcaatctttgagttgattctttgnacgtcgagtttt 865 || |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 3206 aat-tgcttgaaaaaattgatttcgcaatctt-gagttgattctttg-acgtcgagtttc 3262 Query: 866 ctttttcaaaagtctgtttcgcccagcagtagaacgcagaaggaatctacgatttgctgt 925 |||||| | |||||||||||| ||||| || |||||||| ||||||||||||||||| Sbjct: 3263 --ttttcaga-gtctgtttcgcc-agcagatga-cgcagaag-aatctacgatttgctgt 3316 Query: 926 g 926 | Sbjct: 3317 g 3317 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 15,543 Number of Sequences: 1807 Number of extensions: 15543 Number of successful extensions: 579 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)