BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZG08FM1.SCF screened BAC_end
         (905 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1792                                                        1534   0.0  

>3x_Contig1792 
          Length = 28468

 Score = 1534 bits (774), Expect = 0.0
 Identities = 813/822 (98%), Gaps = 3/822 (0%)
 Strand = Plus / Minus

                                                                         
Query: 82    caagcttatttctcattccaagttatccaagtgttcttagttaccacgttggcctcctct 141
             |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15734 caagcttatttcgcattccaagttatccaagtgttcttagttaccacgttggcctcctct 15675

                                                                         
Query: 142   gctacttctactgttactgccatcgtcgaagagccaacttccgcgatgaacttgttggct 201
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15674 gctacttctactgttactgccatcgtcgaagagccaacttccgcgatgaacttgttggct 15615

                                                                         
Query: 202   gagaatttacctaagagttccaatttctacgtcggttacatcattctacaaggtttatcc 261
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15614 gagaatttacctaagagttccaatttctacgtcggttacatcattctacaaggtttatcc 15555

                                                                         
Query: 262   atctcatcaggtgccttgctgcaaatcgtgcctttgatcttgttcttcgtgttggggatg 321
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15554 atctcatcaggtgccttgctgcaaatcgtgcctttgatcttgttcttcgtgttggggatg 15495

                                                                         
Query: 322   ttccttgattctactgcaagaaaaaagtacgctagattcacttcactatcctcaatggcg 381
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15494 ttccttgattctactgcaagaaaaaagtacgctagattcacttcactatcctcaatggcg 15435

                                                                         
Query: 382   tggggtactacattccctgtttacactaacttggctgttatcactttctcctacgcgatc 441
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15434 tggggtactacattccctgtttacactaacttggctgttatcactttctcctacgcgatc 15375

                                                                         
Query: 442   atctctccattgatcttgctgtttgcatgtgttgcattcttcctattatacgttgcttac 501
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15374 atctctccattgatcttgctgtttgcatgtgttgcattcttcctattatacgttgcttac 15315

                                                                         
Query: 502   ctttacaatttgacgtatgtgttccaggaatctccagattcccgtggaatccattaccca 561
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15314 ctttacaatttgacgtatgtgttccaggaatctccagattcccgtggaatccattaccca 15255

                                                                         
Query: 562   agggctttgttccaaacaatggtcggtttgtacttgggacaaatttgtttgttgggtctc 621
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15254 agggctttgttccaaacaatggtcggtttgtacttgggacaaatttgtttgttgggtctc 15195

                                                                         
Query: 622   tttgttgttggtaaaggttggggtccaatcgtgctacaagccatttgtctaggtgtcact 681
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15194 tttgttgttggtaaaggttggggtccaatcgtgctacaagccatttgtctaggtgtcact 15135

                                                                         
Query: 682   gttttcgttcatctaaactttcattcagcatttgaccatttaatggcctttgaacctgtt 741
             ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 15134 gttttcgttcatctaaacttcaattcagcatttgaccatttaatggcctttgaacctgtt 15075

                                                                         
Query: 742   gatacaattgaagcattggatggtaaatcaaacacaccatcttacatcagagatttcgtt 801
             ||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15074 gatacaatgaaggcattggatggtaaatcaaacacaccatcttacatcagagatttcgtt 15015

                                                                         
Query: 802   gaacca-aaaaggatgaaatcaaggaattgccaccattccaaatc-agaagtaccatcct 859
             |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 15014 gaaccagaaaaggatgaaatcaaggaattgccaccattccaaatcaagaagtaccatcct 14955

                                                       
Query: 860   cgttcctcgtcacaattcgaccaaa-aactacatccattctg 900
             ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 14954 cgttcctcgtcacaattcgaccaaagaactacatccattctg 14913


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6279
Number of Sequences: 1807
Number of extensions: 6279
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)