BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZG10FM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1540 1289 0.0 >3x_Contig1540 Length = 9505 Score = 1289 bits (650), Expect = 0.0 Identities = 734/754 (97%), Gaps = 6/754 (0%) Strand = Plus / Minus Query: 88 tgtatgagccccgaatattatagagttttctgctcttctaatgttactgtaaaataggcc 147 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1203 tgtaggagccccgaatattatagagttttctgctcttctaatgttactgtaaaataggcc 1144 Query: 148 ttgcgaggtggcgattattaacttccgtccgccatcacaagatgcaacgctgttaatctt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 ttgcgaggtggcgattattaacttccgtccgccatcacaagatgcaacgctgttaatctt 1084 Query: 208 attggagtatttttattacctatcactaattttgcaaacgttaaagatatcgatttcttt 267 ||||||||| | | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1083 attggagtaatcaaaatacctatcactaattttgcaaacgttaaagatatcgttttcttt 1024 Query: 268 gataatcctagcttgttcctgctttatcttctcaagaagcgtttgcattgctgccaactg 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1023 gataatcctagcttgttcctgctttatcttctcaagaagcgtttgcattgctgcgaactg 964 Query: 328 tgctgcgtataacgttacttggtatttgtttttatcaccataatacgtgaaagagatagc 387 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 963 tgctgcgtataacgttacttggtatttgtttttagcaccataatacgtgaaagagatagc 904 Query: 388 atttctgggattcgtgccagcgattgcatacacgataaataaccataccttgactatccg 447 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 903 atttctgggattcgtgccagcgattgcat-caggataaataaccataccttgactatccg 845 Query: 448 gtttaccgcaaatatgtctctttaaacttggcatttcttcaccaggagcggcaaataaca 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 gtttaccgcaaatatgtctctttaaacttggcatttcttcaccaggagcggcaaataaca 785 Query: 508 acgggagaggtataggccgctggaaaactttatgttgattccatttattgactgctcttg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 784 acgggagaggtataggccgctggaaaactttatgttgattccatttattgactgcttttg 725 Query: 568 acttcaaaaataataacatattgttcagtagataaaattgaaggtcacctgtaacaccat 627 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 724 acttcaaaaataataacatattgtccagtagataaaattgaaggtcacctgtaacaccat 665 Query: 628 tttcattcttggtaatttcttttcttgatagaaggccttcatgcttgatcttccgtttat 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 tttcattcttggtaatttcttttcttgatagaaggccttcatgcttgatcttccgtttat 605 Query: 688 catcattcaatcccatgttgacatactcattcttgaagag-atcttttgcttcaacaatt 746 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 604 catcattcaatcccatgttgacatactcattcttgaaaagaatcttttgcttcaacaatt 545 Query: 747 taacatcatgtctgtcctgagcagcaccactagccttatcaatacgttttcataaatgca 806 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 544 taacatcatgtctgtcctgagcagcaccactagccttatcaatacg-tttcataaatgc- 487 Query: 807 acgaagggcttcttagggccactggttaaattct 840 |||||||||||| ||||||| || |||||||||| Sbjct: 486 acgaagggcttc-tagggcc-cttgttaaattct 455 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6607 Number of Sequences: 1807 Number of extensions: 6607 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)