BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZG10RM1.SCF screened BAC_end (964 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1027 872 0.0 >3x_Contig1027 Length = 4522 Score = 872 bits (440), Expect = 0.0 Identities = 498/516 (96%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 66 gtcaacattggaacatccaggaagctctgagttctccataagtctgtttgttataccgtt 125 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3855 gtcaacattgtaacattcaggaagctctgagttctccataagtctgtttgttataccgtt 3914 Query: 126 ttccatctgtgttctgatcctttgagcatccaactcctgcaatacttttatttcattttc 185 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3915 ttccatctgtgttctgatcctttgagcatccaactcctggaatacttttatttcattttc 3974 Query: 186 gtttctcgccaagatttcattgagttcgttatcatccaactgctcttcttcttcaatgcc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3975 gtttctcgccaagatttcattgagttcgttatcatccaactgctcttcttcttcaatgcc 4034 Query: 246 taactcacgtcttttcttttcctcttcctcagctcctagtaacgatctcaataatgcctc 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4035 taactcacgtcttttcttttcctcttcctcagcttctagtaacgatctcaataatgcctc 4094 Query: 306 ttgttcttcagctgctgatttgttatcaaacttacctgcttgaataactttgccgtcaat 365 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4095 ttgttcttcagctgttgatttgttatcaaacttacctgcttgaataacttttccgtcaat 4154 Query: 366 gtccaatttggcatgcgccttatcaagaattgcttcttccactgaattgcctgtaattaa 425 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4155 gtccaatttggcatgcgccttatcaagaattgcttcttccactgaattgtctgtaattaa 4214 Query: 426 tctaagaatacgcacttcattcttttgaccgattctatgagctctgtcttgggcctgtag 485 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4215 tctaagaatacgcacttcattcttttgaccgattctatgagctctgtcttgggcctgtaa 4274 Query: 486 atcctcgtgaggatttcaatcagtattcaaaatgataacggcatctgccgtttgcaaatt 545 ||||| ||||||||| |||||||||| ||||||||||||| |||||| ||||||||||| Sbjct: 4275 atcctggtgaggattccaatcagtatcaaaaatgataacggtatctgcagtttgcaaatt 4334 Query: 546 taaacctaaacc-ccagcttttgtaaataaagggaa 580 |||||||||||| |||||| ||||| ||||| |||| Sbjct: 4335 taaacctaaaccaccagctcttgtagataaaaggaa 4370 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9047 Number of Sequences: 1807 Number of extensions: 9047 Number of successful extensions: 63 Number of sequences better than 1.0e-20: 1 length of query: 964 length of database: 10,358,551 effective HSP length: 16 effective length of query: 948 effective length of database: 10,329,639 effective search space: 9792497772 effective search space used: 9792497772 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)