BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC8ZH02FM1.SCF screened BAC_end
         (947 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1799                                                        1620   0.0  

>3x_Contig1799 
          Length = 39855

 Score = 1620 bits (817), Expect = 0.0
 Identities = 849/859 (98%), Gaps = 2/859 (0%)
 Strand = Plus / Minus

                                                                         
Query: 89    tacccttggtttccgggtgttggtagatatgagcgtgggatcttgaccatcagttgtact 148
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36210 tacccttggtttccgggtgttggtagatatgagcgtgggatcttgaccatcagttgtact 36151

                                                                         
Query: 149   tgtcatagaaggatccaggccattcacagtaggatccaattcaaaatcaagcctcatgtt 208
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36150 tgtcatagaaggatccaggccattcacagtaggatccaattcaaaatcaagcctcatgtt 36091

                                                                         
Query: 209   cccatcttcagtctcgttgccttgaaatgccgagagatcgttcatatcatcatctataga 268
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36090 cccatcttcagtcgcgttgccttgaaatgccgagagatcgttcatatcatcatctataga 36031

                                                                         
Query: 269   catcgtttacggtactgtctcaaaaaagcaaagagcacacacacttgtagatataaaaaa 328
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36030 catcgtttacggtactgtctcaaaaaagcaaagagcacacacacttgtagatataaaaaa 35971

                                                                         
Query: 329   tactattccgtgccaaatatgaggacttcgacaactgagagcgagagacactatttatgt 388
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35970 tactattccgtgccaaatatgaggacttcgacaactgagagcgagagacactatttatgt 35911

                                                                         
Query: 389   tatcttaaatcgataatgctcttcgacttcagttaagtttggcgtagtatatttcacgga 448
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35910 tatcttaaatcgataatgctcttcgacttcagttaagtttggcgtagtatatttcacgga 35851

                                                                         
Query: 449   aaggaaaagaaataaagtcacgtgaacaatatttacattttcttttggttcgtctggtga 508
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35850 aaggaaaagaaataaagtcacgtgaacaatatttacattttcttttggttcgtctggtga 35791

                                                                         
Query: 509   cattatcagcgtcaagaatctcaacgcagacatttattgcgacagacacagtgacgcgtc 568
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35790 cattatcagcgtcaagaatctcaacgcagacatttattgcgacagacacagtgacgcgtc 35731

                                                                         
Query: 569   gaaaagtcaagagaaggcattcagggggaatgccaagagacaacaaaacgggcaagcaaa 628
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35730 gaaaagtcaagagaaggcattcagggggaatgccaagagacaacaaaacgggcaagcaaa 35671

                                                                         
Query: 629   aagaagcaccgtgaaattttaagtcaaggctgtccttctgataagcaagatagcaagcca 688
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35670 aagaagcaccgtgaaattttaagtcaaggctgtccttctgataagcaagatagcaagcca 35611

                                                                         
Query: 689   aacactatgttttggctgcgttgataagaagacaaatgctgtcaatcacgtgataatccc 748
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35610 aacactatgttttggctgcgttgataagaagacaaatgctgtcaatcacgtgataatccc 35551

                                                                         
Query: 749   tcttttttaagttttcttgggggcattcattangcgcatgtcacatgctctgttgaggaa 808
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 35550 tcttttttaagttttcttgggggcattcattaggcgcatgtcacatgctctgttgaggaa 35491

                                                                         
Query: 809   tgagtggaaagccacactttttattgcggtactttcacttaagctgatgaaaagatcggt 868
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 35490 tgagtggaaagccacactttttattgcggtactttcacttaggctgatgaaaagatcggt 35431

                                                                         
Query: 869   gtttgaaagttctgctgagaagttattgtgaaaatgtcaaatgataacgcacattaacgg 928
             |||||||  | ||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 35430 gtttgaagttcctgctgagaggttattgtgaaagtgtcaaatgataacgcacattaacgg 35371

                                
Query: 929   gcttggccttttgattcct 947
             |||  ||||||||||||||
Sbjct: 35370 gct--gccttttgattcct 35354


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6637
Number of Sequences: 1807
Number of extensions: 6637
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)