BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZH02FM1.SCF screened BAC_end (947 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1799 1620 0.0 >3x_Contig1799 Length = 39855 Score = 1620 bits (817), Expect = 0.0 Identities = 849/859 (98%), Gaps = 2/859 (0%) Strand = Plus / Minus Query: 89 tacccttggtttccgggtgttggtagatatgagcgtgggatcttgaccatcagttgtact 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36210 tacccttggtttccgggtgttggtagatatgagcgtgggatcttgaccatcagttgtact 36151 Query: 149 tgtcatagaaggatccaggccattcacagtaggatccaattcaaaatcaagcctcatgtt 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36150 tgtcatagaaggatccaggccattcacagtaggatccaattcaaaatcaagcctcatgtt 36091 Query: 209 cccatcttcagtctcgttgccttgaaatgccgagagatcgttcatatcatcatctataga 268 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36090 cccatcttcagtcgcgttgccttgaaatgccgagagatcgttcatatcatcatctataga 36031 Query: 269 catcgtttacggtactgtctcaaaaaagcaaagagcacacacacttgtagatataaaaaa 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36030 catcgtttacggtactgtctcaaaaaagcaaagagcacacacacttgtagatataaaaaa 35971 Query: 329 tactattccgtgccaaatatgaggacttcgacaactgagagcgagagacactatttatgt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35970 tactattccgtgccaaatatgaggacttcgacaactgagagcgagagacactatttatgt 35911 Query: 389 tatcttaaatcgataatgctcttcgacttcagttaagtttggcgtagtatatttcacgga 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35910 tatcttaaatcgataatgctcttcgacttcagttaagtttggcgtagtatatttcacgga 35851 Query: 449 aaggaaaagaaataaagtcacgtgaacaatatttacattttcttttggttcgtctggtga 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35850 aaggaaaagaaataaagtcacgtgaacaatatttacattttcttttggttcgtctggtga 35791 Query: 509 cattatcagcgtcaagaatctcaacgcagacatttattgcgacagacacagtgacgcgtc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35790 cattatcagcgtcaagaatctcaacgcagacatttattgcgacagacacagtgacgcgtc 35731 Query: 569 gaaaagtcaagagaaggcattcagggggaatgccaagagacaacaaaacgggcaagcaaa 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35730 gaaaagtcaagagaaggcattcagggggaatgccaagagacaacaaaacgggcaagcaaa 35671 Query: 629 aagaagcaccgtgaaattttaagtcaaggctgtccttctgataagcaagatagcaagcca 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35670 aagaagcaccgtgaaattttaagtcaaggctgtccttctgataagcaagatagcaagcca 35611 Query: 689 aacactatgttttggctgcgttgataagaagacaaatgctgtcaatcacgtgataatccc 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35610 aacactatgttttggctgcgttgataagaagacaaatgctgtcaatcacgtgataatccc 35551 Query: 749 tcttttttaagttttcttgggggcattcattangcgcatgtcacatgctctgttgaggaa 808 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 35550 tcttttttaagttttcttgggggcattcattaggcgcatgtcacatgctctgttgaggaa 35491 Query: 809 tgagtggaaagccacactttttattgcggtactttcacttaagctgatgaaaagatcggt 868 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 35490 tgagtggaaagccacactttttattgcggtactttcacttaggctgatgaaaagatcggt 35431 Query: 869 gtttgaaagttctgctgagaagttattgtgaaaatgtcaaatgataacgcacattaacgg 928 ||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 35430 gtttgaagttcctgctgagaggttattgtgaaagtgtcaaatgataacgcacattaacgg 35371 Query: 929 gcttggccttttgattcct 947 ||| |||||||||||||| Sbjct: 35370 gct--gccttttgattcct 35354 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6637 Number of Sequences: 1807 Number of extensions: 6637 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 947 length of database: 10,358,551 effective HSP length: 16 effective length of query: 931 effective length of database: 10,329,639 effective search space: 9616893909 effective search space used: 9616893909 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)