BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZH04RM1.SCF screened BAC_end (972 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1500 963 0.0 >3x_Contig1500 Length = 9720 Score = 963 bits (486), Expect = 0.0 Identities = 547/558 (98%), Gaps = 7/558 (1%) Strand = Plus / Plus Query: 43 ctttgattcaacttctaaacggtcaaaccgatatatgtctgtaatatactatatatacat 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8301 ctttgattcaacttctaaacggtcaaaccgatatatgtctgtaatatactatatatacat 8360 Query: 103 aatcagactttaat-atacacaaagcgaaagataaatcacgtgagtaatatatcggtcca 161 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8361 aatcagactttaatcatacacaaagcgaaagataaatcacgtgagtaatatatcggtcca 8420 Query: 162 ttgcctaggttccctcccttcctcgtttaaaaaacgtaatgctgccaatcgtataacgtc 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8421 ttgcctaggttccctcccttcctcgtttaaaaaacgtaatgctgccaatcgtataacgtc 8480 Query: 222 gtttacgggatttcgcctcgagggaacgaaaagaatgaaaagcataataccgaagcgaat 281 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 8481 gtttacgggatttcgcctcgagggaacgaaaagaatgaaaagcataatac-gaagcgaat 8539 Query: 282 aaaaaaaaacagttagagaaaccccagaaactgccgtaccagaaaggaaactgggtggtg 341 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8540 aaaaaaaaacagttag-gaaaccccagaaactgccgtaccagaaaggaaactgggtggtg 8598 Query: 342 ctgaaatgtgcatcaaagcccaactggcgacagaaaaacaggccacaacttgcgaaaagt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8599 ctgaaatgtgcatcaaagcccaactggcgacagaaaaacaggccacaacttgcgaaaagt 8658 Query: 402 acgccgtaaacactctagaagaaaagagctagtcgtatagactagctgtgataacggtat 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8659 acgccgtaaacactctagaagaaaagagctagtcgtatagactagctgtgataacggtat 8718 Query: 462 gaacggcttggtttcgcaagccaatgcttattgaagaaa-ggaccgatgatgctcgatac 520 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 8719 gaacggcttggtttcgcaagccaatgcttattgaagaaatggaccgatgaggctcgatac 8778 Query: 521 tcttcgcattctatcgttaaaactcggggttttttattggttcaatttggttaccttcgg 580 ||||||||||||||||||||||||| |||||||||| | |||||||||||||| |||| | Sbjct: 8779 tcttcgcattctatcgttaaaactc-gggtttttta-tcgttcaatttggttaacttc-g 8835 Query: 581 ggaaaaaaaagttaaaaa 598 ||||||||||||||||| Sbjct: 8836 tgaaaaaaaagttaaaaa 8853 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8506 Number of Sequences: 1807 Number of extensions: 8506 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 972 length of database: 10,358,551 effective HSP length: 16 effective length of query: 956 effective length of database: 10,329,639 effective search space: 9875134884 effective search space used: 9875134884 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)