BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZH06FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1546 0.0 >3x_Contig1770 Length = 29267 Score = 1546 bits (780), Expect = 0.0 Identities = 816/827 (98%), Gaps = 2/827 (0%) Strand = Plus / Plus Query: 89 ccagcgtactctctgactaacagaacacaaggatgtgaagagtttccacaaattggatgt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26748 ccagcgtactctctgactaacagaacacaaggatgtgaagagtttccacaaattggatgt 26807 Query: 149 tggctgcatcacatgccttgcatagatgacaccaacggcatatgcggcaacaagactttc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26808 tggctgcatcacatgccttgcatagatgacaccaacggcatatgcggcaacaagactttc 26867 Query: 209 ttgtaaacatattttctcgaacttgatccaattggagctattgcataatgagtttctaga 268 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26868 ttgtaaacagaaattctcgaacttgatccaattggagctattgcataatgagtttctaga 26927 Query: 269 agtggcatgtttcaatacggaatgggtagtgtctagtttcttgcactgcttcgagcacca 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26928 agtggcatgtttcaatacggaatgggtagtgtctagtttcttgcactgcttcgagcacca 26987 Query: 329 gatggtgttacacatgttacaatccaaattgttcttgatgatcaattgtgatgacaatgt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26988 gatggtgttacacatgttacaatccaaattgttcttgatgatcaattgtgatgacaatgt 27047 Query: 389 ggtgaaagcagagcacaaaccacaacatttacctctacttaccaaaggctgcttgtccaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27048 ggtgaaagcagagcacaaaccacaacatttacctctacttaccaaaggctgcttgtccaa 27107 Query: 449 ttgcggaatcacagtcaatggtaactgttcatggaagaccaatccacctttcctaatatc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27108 ttgcggaatcacagtcaatggtaactgttcatggaagaccaatccacctttcctaatatc 27167 Query: 509 atcggtggctactaatcctttcccaaactcagtatcagcaatggtaactttatccaacaa 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27168 atcggtggctactaatcctttcccaaactcagtatcagcaatggtaactttatccaacaa 27227 Query: 569 ttttttattcaactgggcaatatcagcatccgtaacggtactgggtctgatgtcgccagt 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27228 ttttttattcaactgggcaatatcagcatccgtaacggtactgggtctgatgtcgccagt 27287 Query: 629 ataactgtccaattcgttcaactctggagtgtacaatttatgcgatttcaatgcttggta 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27288 ataactgtccaattcgttcaactctggagtgtacaatttatgcgatttcaatgcttggta 27347 Query: 689 taattcatctttggttactgaccaattggagcgtcgtcggatcaaatgttcgtacaacgt 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27348 taattcatctttggttactgaccaattggagcgtcgtcggatcaaatgttcgtacaacgt 27407 Query: 749 atctatcagcatatcttcggcagccggttcttccttccaccaacgnaccacttcatcgca 808 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 27408 atctatcagcatatcttcggcagccggttcttccttccaccaacggaccacttcatcgca 27467 Query: 809 aagctgggttcggctaggagtgatcaagctgnacccngtgctctgatcttcatcgntcaa 868 |||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| Sbjct: 27468 gagctgggttcggctaggagtgatcaagctggacccggtgctctgatcttcatcgttcaa 27527 Query: 869 cccgaagtgtctctancttc-aatgaaccatcacttcaggccaagga 914 |||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 27528 -ccgaagtgtctctagcttcaaatgaaccatcacttcaggccaagga 27573 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5643 Number of Sequences: 1807 Number of extensions: 5643 Number of successful extensions: 22 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)