BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC8ZH06RM1.SCF screened BAC_end (984 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1313 1047 0.0 >3x_Contig1313 Length = 8010 Score = 1047 bits (528), Expect = 0.0 Identities = 674/710 (94%), Gaps = 10/710 (1%) Strand = Plus / Plus Query: 55 cttgattacatgtctttttattatatttaatgtgttcttagaatttcccaatgtagacct 114 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2718 cttgattacat-tctttttattatatttaatgtgttcttagaatttcccaatgtagacct 2776 Query: 115 ctctctattcttgtccttt-aatagtttttttctccactaaggaatagcctttgtttaaa 173 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2777 ctctctattcttgtcctttcaatagtttttttctccactaaggaatagcctttgtttaaa 2836 Query: 174 tcccaaacaaaatgaaatcgttctttcacattaaatcttgaactcttgaatggaaactcg 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2837 tcccaaacaaaatgaaatcgttctttcacattaaatcttgaactcttgaatggaaactcg 2896 Query: 234 gcaagtatggcagaccagttccttcacgctagataaaacattggctggtcggagttgtgt 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2897 gcaagtatggcagaccagttccttcacgctagataaaacattggctggtcggagttgtgt 2956 Query: 294 taagaaaaaattatgttgaaacggattcttgtacttgattttgatggcactatcaccact 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2957 taagaaaaaattatgttgaaacggattcttgtacttgattttgatggcactatcaccact 3016 Query: 354 agtgataccaccagtatcattgggcaatctgtttacaatttgaaatcagtacctgtcgca 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3017 agtgataccaccagtatcattgggcaatctgtttacaatttgaaatcagtacctgtcgca 3076 Query: 414 tggactcattataccaagatatacgatgaatgctatattccaaaaccagaagattttgca 473 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| Sbjct: 3077 tggactcattataccaagatatacgaggaatgctatattccaaaaccagagaatttggca 3136 Query: 474 cctgatgcttggaaagtggtttgtgattatgaacgtgc-agcagaaagtgtgagctaagt 532 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 3137 cctgatgcttggaaagtggtttgtgattatgaacgtgcaagcagaaggtgtgagctaagt 3196 Query: 533 tcaatcaacgaactagaattgcangatcatttt-aagatgtggtgatcaaagatctnctg 591 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||| Sbjct: 3197 tcaatcaacgaactagaattgcaggatcattttaaagatgtggtgatcaaagatctcctg 3256 Query: 592 cagctcgtt-aggaaaaagtagat-tcagaccctga-tacaggatctgatgca-cagtat 647 ||||||||| |||||||||||||| ||||||| || ||||||| |||||||| |||||| Sbjct: 3257 cagctcgttaaggaaaaagtagatatcagacctggattacaggagctgatgcagcagtat 3316 Query: 648 -accagacgtacgtgctttcgttgaactggtccaaagaccctattccccaacttaccggg 706 || ||||||||||||||||||||||||||||||| || ||| | | | || || |||| Sbjct: 3317 aacaagacgtacgtgctttcgttgaactggtccaagga-cctcatacacgacctaacggg 3375 Query: 707 tattttcaattccgatttcttctgttacgatttaaaatcacgtgatgggg 756 ||||| ||| || ||| ||| |||| |||| ||||||||||||||||||| Sbjct: 3376 tatttccaaatcggatatctactgtaacgaattaaaatcacgtgatgggg 3425 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8500 Number of Sequences: 1807 Number of extensions: 8500 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 984 length of database: 10,358,551 effective HSP length: 16 effective length of query: 968 effective length of database: 10,329,639 effective search space: 9999090552 effective search space used: 9999090552 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)