BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZA05RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1721 1231 0.0 >3x_Contig1721 Length = 17834 Score = 1231 bits (621), Expect = 0.0 Identities = 686/705 (97%), Gaps = 2/705 (0%) Strand = Plus / Plus Query: 48 caagtagcattttctcgaactctaggtcctcttcgatgacattttggtctgtaacggtaa 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5455 caagtagcattttctcgaactctaggtcctcttcgatgacattttggtctgtaacggtaa 5514 Query: 108 tttgtgttccccatacagtacgttccttcatttttggtttcgatgaagcttcgtcatctg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5515 tttgtgttccccatacagtacgttccttcatttttggtttcgatgaagcttcgtcatctg 5574 Query: 168 gcgatgctgacaatgcaatatttgaaggatggttaacggtactggtcttctttgatggaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5575 gcgatgctgacaatgcaatatttgaaggatggttaacggtactggtcttctttgatggaa 5634 Query: 228 actgagtggctggcttttgcataggtggatactggttattgttttcacgttggtagaatt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5635 actgagtggctggcttttgcataggtggatactggttattgttttcacgttggtagaatt 5694 Query: 288 ctaggtgttcttgctcaagtcgttcttggtaggtaatcttgtctttatcctctttgtttc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5695 ctaggtgttcttgctcaagtcgttcttggtaggtaatcttgtctttatcctctttgtttc 5754 Query: 348 tctttgtcatcgcttttctgtgcctttgtctcaactcagcaaagaatttgttataaactt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5755 tctttgtcatcgcttttctgtgcctttgtctcaactcagcaaagaatttgttataaactt 5814 Query: 408 cctttggaatgatgtcctcattgcgccaatcaaggtcaacgaatgctaactctgtaccaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5815 cctttggaatgatgtcctcattgcgccaatcaaggtcaacgaatgctaactctgtaccaa 5874 Query: 468 tcggtaaatgagagaaatacttgaatttggatatagttgtttccgtaaccattgatccgt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5875 tcggtaaatgagagaaatacttgaatttggatatagttgtttccgtaaccattgatccgt 5934 Query: 528 aatggatgtcttcaactttgatcttgatagtgctaaggaattcgtggtagtgtgcaaata 587 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 5935 aatggatgtcttcaactttgatcttgatagtgctagggaattcgtggtagtgtgcaaata 5994 Query: 588 cgtttttcatcacctttaacgtctaatggggaaagataaaatttcgtggtggagtttgac 647 ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| || Sbjct: 5995 cgtttttcaacacc-ttaacgtctaatggtgaaagataaaatttcgtggtggagttgaac 6053 Query: 648 ccagcctcgtaataggagaatgctttatcatcatgggatttttctaatccacctgatgca 707 ||||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 6054 ccagcctcgtaatagaagaatgcattatcatcattgtatttttctaatccacctgatgca 6113 Query: 708 ttagaaaaggccaaaaattcggggctctttaatggtgttcttgga 752 ||| ||||| || |||| |||||||||| || |||||||||| Sbjct: 6114 atag-aaagggcagaaatatcgggctctttattgttgttcttgga 6157 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6714 Number of Sequences: 1807 Number of extensions: 6714 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)