BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZA10RM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 1334 0.0 >3x_Contig1801 Length = 57606 Score = 1334 bits (673), Expect = 0.0 Identities = 812/841 (96%), Gaps = 13/841 (1%) Strand = Plus / Minus Query: 48 ttatcgaatctggataatgagaacggtgacgcggacgatgcagatctatttgaggaagaa 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50434 ttatcgaatctggataatgagaacggtgacgcggacgatgcagatctatttgaggaagaa 50375 Query: 108 cccgaggaacaaaaccctgctaatgaagcatccgaatctgatttgttgaaatccccatct 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50374 cccgaggaacaaaaccctgctaatgaagcatccgaatctgatttgttgaaatccccatct 50315 Query: 168 aaagaagacgatactaccgcagcaggtaatgaggaacaagaacaagaacaagaacaagaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50314 aaagaagacgatactaccgcagcaggtaatgaggaacaagaacaagaacaagaacaagaa 50255 Query: 228 caggacgaacaaatggataaagagaatgacgaaatcgcgttgccagaaactaaaaaggaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50254 caggacgaacaaatggataaagagaatgacgaaatcgcgttgccagaaactaaaaaggaa 50195 Query: 288 agcgattcgaacggcgaggggaacaatgaccctgttggaaatatagaaactgaacagagc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50194 agcgattcgaacggcgaggggaacaatgaccctgttggaaatatagaaactgaacagagc 50135 Query: 348 gaggtagaacctgcacagaacgaactggaaactgccaatgacaaacaagagccagcacca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50134 gaggtagaacctgcacagaacgaactggaaactgccaatgacaaacaagagccagcacca 50075 Query: 408 gaaccagaatcatttactgaaaaccccaaattaccagacgtgaaggacttatggcagccc 467 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 50074 gaaccagaatcatttactgaaaaccccaaattaccagacgtgaaggacttagggcagccc 50015 Query: 468 gattctggtatagatgctccagtacatactacaacagagacaacagttgatgaagatatt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 50014 gattctggtatagatgctccagtacatactacaacagagacaacagttgatgaagaaatt 49955 Query: 528 gataaagagcacaatactgaagcagaagcagaacctgaagtagatagtattcttgaacaa 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49954 gataaagagcacaatactgaagcagaagcagaacctgaagtagatagtattcttgaacaa 49895 Query: 588 gaatcgagatcagcttctcctgaaatcaatat-accgtaaagcaagaaagt-atactgct 645 |||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||| Sbjct: 49894 gaatcgagatcagcttctcctgaatcaaatataaccgtaaagcaagaaagtaatactgct 49835 Query: 646 gatcc-aaattatttgtaccgcaat-ccatgaaattgtaatcccttcatactcgaagtgg 703 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 49834 gatccaaaattatttgtaccgcaatcccatgaaattgtaatcccttcatactcgaagtgg 49775 Query: 704 tttaatttgacccaagttcatgaaatcg-agtgaaatctttaccggaattctt-actaat 761 |||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 49774 tttaatttgaccaaagttcatgaaatcgaagtgaaatctttaccggaattcttcactaat 49715 Query: 762 ag-ataccctcaaagac-ccccaaatgtacgtaaaat-ttgtaacttcatggtaaactc- 817 || ||||| |||||||| ||||| |||||||| |||| | ||||||||||||||||||| Sbjct: 49714 agaataccttcaaagacaccccagatgtacgtcaaatatcgtaacttcatggtaaactct 49655 Query: 818 tattgactaattccaaatg-atacttc-caggccctgcagcttagaaaaaccctttgtgg 875 ||| |||||| |||||||| ||||||| ||| | ||||||| ||||| || ||||||||| Sbjct: 49654 tatagactaaatccaaatgaatacttcacagtcactgcagc-tagaagaaacctttgtgg 49596 Query: 876 a 876 | Sbjct: 49595 a 49595 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7236 Number of Sequences: 1807 Number of extensions: 7236 Number of successful extensions: 87 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)