BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC9ZA12FM1.SCF screened BAC_end
         (941 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1588                                                        1518   0.0  

>3x_Contig1588 
          Length = 14692

 Score = 1518 bits (766), Expect = 0.0
 Identities = 833/848 (98%), Gaps = 7/848 (0%)
 Strand = Plus / Minus

                                                                        
Query: 84   tggcagattccaaatcctctggaacaaaccaatctctttcgtgaatcgacggatcagttt 143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5726 tggcagattccaaatcctctggaacaaaccaatctctttcgtgaatcgacggatcagttt 5667

                                                                        
Query: 144  ccggtgtacgcacatccttgtatacaggaacgttgatacaaactttctcaccacgtctag 203
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5666 ccggtgtacgcacatccttgtatacaggaacgttgatacaaactttctcaccacgtctag 5607

                                                                        
Query: 204  tcctaatattggctg-caacgtggggaacctagcgtgcctattgataatctcatcgggta 262
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5606 tcctaatattggctgtcaacgtggggaacctagcgtgcctattgataatctcatcgggta 5547

                                                                        
Query: 263  aaaacagcgacctactagccgaatttttatgatcccatgggttcttcaaattcgtaaaat 322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5546 aaaacagcgacctactagccgaatttttatgatcccatgggttcttcaaattcgtaaaat 5487

                                                                        
Query: 323  tgtcacgacccatgcgtgggaaaacagccaacgacaacggagtcaccaagttcacgtcgt 382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5486 tgtcacgacccatgcgtgggaaaacagccaacgacaacggagtcaccaagttcacgtcgt 5427

                                                                        
Query: 383  taaatttcttcaatttctgttctgccacggccctgcgcatctgcatgttcctctcaacct 442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5426 taaatttcttcaatttctgttctgccacggccctgcgcatctgcatgttcctctcaacct 5367

                                                                        
Query: 443  ctgcaccctcgaagtccttatatggcttcgcaggtgtcgcctccaacataaaccgaccgt 502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5366 ctgcaccctcgaagtccttatatggcttcgcaggtgtcgcctccaacataaaccgaccgt 5307

                                                                        
Query: 503  actcgggatggaaatgaacgttcaactcgtcacactcggcctggtattccgtattcaact 562
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5306 actcgggatggaaatgaacgttcaactcgtcacactcggcctggtattccgtattcaact 5247

                                                                        
Query: 563  gaaccaaaacctcatcatgtttcacactaagaacaacgttctcattagcctcatcgaact 622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5246 gaaccaaaacctcatcatgtttcacactaagaacaacgttctcattagcctcatcgaact 5187

                                                                        
Query: 623  cacaaatcatatactcgacttcatctccccagtacaattcatcgccgtctctagactcag 682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5186 cacaaatcatatactcgacttcatctccccagtacaattcatcgccgtctctagactcag 5127

                                                                        
Query: 683  cactttcaaaagaattcaacaactgttcaatcccattcacacgcacatgctcattgtact 742
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5126 cactttcaaaagaattcaacaactgttcaatcccattcacacgcacatgctcattgtact 5067

                                                                        
Query: 743  tgcgtgagtctagccatgacat--gggcgtcccagatgacaacaaccccatttctctttc 800
            ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 5066 tgcgtgagtctagccatgacatagcggcgtcccagatgacaacaaccccatttctctttc 5007

                                                                        
Query: 801  tcttttgaat-agcctncctttaatgcagcgaccaaaa-caccgcttagacagtaccaaa 858
            ||||| |||| ||||| |||| |||||||||||||||| ||||||| |||||||||||||
Sbjct: 5006 tctttagaataagcctcccttaaatgcagcgaccaaaaccaccgctaagacagtaccaaa 4947

                                                                        
Query: 859  cggcgcccaaaccactaccacaaaaaaactggaga-tgacctgcccccaatacaacaaag 917
            ||||||| ||||||||||||||||||| || |||| ||||||||||| ||||||||||||
Sbjct: 4946 cggcgccaaaaccactaccacaaaaaacct-gagattgacctgccccaaatacaacaaag 4888

                    
Query: 918  aacccact 925
            ||||||||
Sbjct: 4887 aacccact 4880


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5585
Number of Sequences: 1807
Number of extensions: 5585
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)