BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC9ZB01FM1.SCF screened BAC_end
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1794 1590 0.0
>3x_Contig1794
Length = 36744
Score = 1590 bits (802), Expect = 0.0
Identities = 827/833 (99%), Gaps = 2/833 (0%)
Strand = Plus / Plus
Query: 87 tcattcatttattcctcaaatattgggtccaatagataatctagtcccaccaattgctca 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22648 tcattcatttattcctcaaatattgggtccaatagataatctagtcccaccaattgctca 22707
Query: 147 aagaacttacggtatcaccgtttttgaacatgcttataacaccgcaatagatgaagctgc 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22708 aagaacttacggtatcaccgtttttgaacatgcttataacaccgcaatagatgaaactgc 22767
Query: 207 gctaggaaaattggtaccaggtttgatacttgttgcaagaaacgctgaatttacctttga 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22768 gctaggaaaattggtaccaggtttgatacttgttgcaagaaacgctgaatttacctttga 22827
Query: 267 cgatggtttaacgtacagcttgggaatagaaacgccgtttgtggccattctaaaatctgt 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22828 cgatggtttaacgtacagcttgggaatagaaacgccgtttgtggccattctaaaatctgt 22887
Query: 327 ggatcttgaaactcaatctttatcagtgattgaagagcttggtggtgagtgcaaagtatc 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22888 ggatcttgaaactcaatctttatcagtgattgaagagcttggtggtgagtgcaaagtatc 22947
Query: 387 tatgtatccacttgaaaacttgactaaaggaaagttaaaggtggccaagccagtacatcg 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22948 tatgtatccacttgaaaacttgactaaaggaaagttaaaggtggccaagccagtacatcg 23007
Query: 447 caaggacattggttggtaagaatgatacaaggaagtaaaacaaattgacctcttgaagaa 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23008 caaggacattggttggtaagaatgatacaaggaagtaaaacaaattgacctcttgaagaa 23067
Query: 507 caaatgcaagaacacatatgctgctatttgaataaatatatagtatatacaatattgatt 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23068 caaatgcaagaacacatatgctgctatttgaataaatatatagtatatacaatattgatt 23127
Query: 567 gagaaggatactaaaaaagttaaatacatgaataaagaaacaactcaaaacttgatgtta 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23128 gagaaggatactaaaaaagttaaatacatgaataaagaaacaactcaaaacttgatgtta 23187
Query: 627 agcttgtttctcattttcgaacttcgcccagtagggataatctgtttcaaactccaaatc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23188 agcttgtttctcattttcgaacttcgcccagtagggataatctgtttcaaactccaaatc 23247
Query: 687 caaacctttgtatctccaagcatgtagatatagctctaacgattctggagttggatcttt 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23248 caaacctttgtatctccaagcatgtagatatagctctaacgattctggagttggatcttt 23307
Query: 747 tggcatttcttcgtcgcattcaggacatcgttcttgattntcattcaattgatcccagac 806
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 23308 tggcatttcttcgtcgcattcaggacatcgttcttgattttcattcaattgatcccagac 23367
Query: 807 atcatccagttcaacctcgaaccgcttccgtagcttttcgattctttcgttttgtagttg 866
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23368 atcatccagttcaacctcgaaccgcttccgtagcttttcgattctttcgtttgttagttg 23427
Query: 867 agtccaatctggggtctcaat-ataaaccttgaccgt-atgggtacgttgagt 917
||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 23428 agtccaatctggggtctcaataataaaccttgaccgtaatgggtacgttgagt 23480
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6822
Number of Sequences: 1807
Number of extensions: 6822
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)