BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC9ZB06FM1.SCF screened BAC_end
(919 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1710 1594 0.0
>3x_Contig1710
Length = 16151
Score = 1594 bits (804), Expect = 0.0
Identities = 829/835 (99%), Gaps = 2/835 (0%)
Strand = Plus / Minus
Query: 87 tggaggaattggtatttgtgctggagagagcattttcaattctgaattcaccttaaggga 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4626 tggaggaattggtatttgtgctggagagagcattttcaattctgaattcaccttaaggga 4567
Query: 147 taatgttccctgcttttgagacacccccggaaatcctgttacttgaatgtgatctccaat 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4566 taatgttccctgcttttgagacacccccggaaatcctgttacttgaatgtgatctccaat 4507
Query: 207 cttgaacttttt-atttgtgcctgaaactcaccaacagacatgggaaggttactgaggtt 265
|||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4506 cttgaactttctcatgtgtgcctgaaactcaccaacagacatgggaaggttactgaggtt 4447
Query: 266 aacaattacttgcagcgatttctcatcatttaagaggttaatgaaaccaatcttcttacc 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4446 aacaattacttgcagcgatttctcatcatttaagaggttaatgaaaccaatcttcttacc 4387
Query: 326 ggagaatctcatattggtgatctttcctcgtaaagtatgtgtagttgaacggtcatctac 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4386 ggagaatctcatattggtgatctttcctcgtaaagtatgtgtagttgaacggtcatctac 4327
Query: 386 ctttaaaccatcatactctttaatgaaacgagacacatctatcgtaggtttcggaatatt 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4326 ctttaaaccatcatactctttaatgaaacgagacacatctatcgtaggtttcggaatatt 4267
Query: 446 tgatagagaagggtaccatttggttaaattcttagatatttctgcatttcttgtcctgta 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4266 tgatagagaagggtaccatttggttaaattcttagatatttctgcatttcttgtcctgta 4207
Query: 506 ctccaagacaccggcctcggtcgagtgtaacctttggaacccgcgaaggatgtgatatga 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4206 ctccaagacaccggcctcggtcgagtgtaacctttggaacccgcgaaggatgtgatatga 4147
Query: 566 cctcaacatcggaaaggtatggttattacaacaaaggaacaccacagatggaacgaaaga 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4146 cctcaacatcggaaaggtatggttattacaacaaaggaacaccacagatggaacgaaaga 4087
Query: 626 ataatgttagaattgaaccgttaatatctcttctctgatacagcgattgtttgaccgacc 685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4086 ataatgttagaattgaaccgttaatatctcttctctgatacagcgattgtttgaccgacc 4027
Query: 686 gaccgaacaatacgtataccccttccctattatggatttacaactcttctgccgtttctc 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4026 gaccgaacaatacgtataccccttccctattatggatttacaactcttctgccgtttctc 3967
Query: 746 atgaactagacttttatgatttcgatattttcttgttaaatttgaatactctgacagaaa 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3966 atgaactagacttttatgatttcgatattttcttgttaaatttgaatactctgacagaaa 3907
Query: 806 gatatgtacactagagagcanactagcgaaactaaaaactataaacgacaagagtatcta 865
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 3906 gatatgtacactagagagcaaactagcgaaactaagaactataaacgacaagagtatcta 3847
Query: 866 cgttgatagaat-aattacaattatgtcatagtgcatgtttcgatctcagtagtt 919
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3846 cgttgatagaataaattacaattatgtcatagtgcatgtttcgatctcagtagtt 3792
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6204
Number of Sequences: 1807
Number of extensions: 6204
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)