BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZB10RM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1724 1164 0.0 >3x_Contig1724 Length = 20938 Score = 1164 bits (587), Expect = 0.0 Identities = 642/658 (97%), Gaps = 2/658 (0%) Strand = Plus / Minus Query: 39 atatttgaccttcgaatcataatgttgtaaaagttgcattattatcaatttgtctttacc 98 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 17264 atatttgaccttcgaatcagaatgttgtaaaagttgcattattatcaatttgtctttacc 17205 Query: 99 aagtattttgataaaatcattatccaattccatgactttgcggatgtcattcaacaaaat 158 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17204 aagtattttgatagaatcattatccaattccatgactttgcggatgtcattcaacaaaat 17145 Query: 159 ttgaagactgaccgaagaaggcctcttctcggtgataaattccttcaataaatctatcaa 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17144 ttgaagactgaccgaagaaggcctcttctcggtgataaattccttcaataaatctatcaa 17085 Query: 219 ttgcaagaatagtttccagttattttctttgaatttatccaaattgtccaaccagaattg 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17084 ttgcaagaatagtttccagttattttctttgaatttatccaaattgtccaaccagaattg 17025 Query: 279 atcgtcttgatgaacaggagaccataataaaatcttggagttcaactccgccaaatattc 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17024 atcgtcttgatgaacaggagaccataataaaatcttggagttcaactccgccaaatattc 16965 Query: 339 gtcgaatgatgttaattcatggtactctgcttccaaagattctttcaaagtagttaaatc 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16964 gtcgaatgatgttaattcatggtactctgcttccaaagattctttcaaagtagttaaatc 16905 Query: 399 ttgtttcaattcatcgtccaaaaactttctctccattatctggttcaaagtagggatggc 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16904 ttgtttcaattcatcgtccaaaaactttctctccattatctggttcaaagtagggatggc 16845 Query: 459 atttcctagcaaaattaaattcttaactgtggatttatgatttttcactgattcattgat 518 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16844 atttcctagcaaaattaaattcttaactgtggatttatgatttttcactgattcattgat 16785 Query: 519 accatttagaatgattgncactgaaagtctgacgacttttttcttaattgtagatctaat 578 ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 16784 accatttagaatgattgcaactgaaagtctgacgactttttccttaattgtagatctaat 16725 Query: 579 caaccttaatagttgt-aatagtgtgctagatgttccttaatgaacgcttcagttatctt 637 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 16724 caaccttaatagttgtaaatagtgtgctagatgttccttagtgaacgcttcagttatctt 16665 Query: 638 aggatccgaggtcattaaccagattatatttaccgcctagtattgtaagttgaatttg 695 |||||| |||||| ||||||||| || ||| ||| ||||||||| ||||||||||| Sbjct: 16664 aggatcgaaggtcaataaccagataatcattaacgcgtagtattgt-agttgaatttg 16608 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,659 Number of Sequences: 1807 Number of extensions: 10659 Number of successful extensions: 93 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)