BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZC04FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1479 1528 0.0 >3x_Contig1479 Length = 7316 Score = 1528 bits (771), Expect = 0.0 Identities = 816/826 (98%), Gaps = 4/826 (0%) Strand = Plus / Plus Query: 89 ctgaaaaatcccttttctgaattggaatctgccacttggactttaccgttttgtggttga 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3934 ctgaaaaatcccttttctgaattggaatctgccacttggactttaccgttttgtggttga 3993 Query: 149 ttctgttgaaattgatactgtggttgttgttgacgattttgtgagaattgttgttgtgaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3994 ttctgttgaaattgatactgtggttgttgttgacgattttgtgagaattgttgttgtgaa 4053 Query: 209 gtatcattgtttggtgacttttgagctttctgttgcgttggttgtggttgttgagcgtaa 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4054 gtatcattgtttggtgacttttgagctttctgttgcgttggttgtggttgttgagcgtaa 4113 Query: 269 cgttgttggacttgctgcttgtaagcttcgtatgacatagggtccagcctttgttgtgtg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4114 cgttgttggacttgctgcttgtaagcttcgtatgacatagggtccagcctttgttgtgtg 4173 Query: 329 tgttgttgatattgttgttgagacatgatctgttgtggttgttgaggggcattgctaaca 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4174 tgttgttgatattgttgttgagacatgatctgttgtggttgttgaggggcattgctaaca 4233 Query: 389 ccttgagttaaatcggttccaccaggtaatggggaatgtgattgtaagggaacgtttgat 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4234 ccttgagttaaatcggttccaccaggtaatggggaatgtgattgtaagggaacgtttgat 4293 Query: 449 ccgttcaaattgtttaccgctaatggaacttggttaaacttatttctatgtctcttactc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4294 ccgttcaaattgtttaccgctaatggaacttggttaaacttatttctatgtctcttactc 4353 Query: 509 ttttcattcggaggagttgggtgaccatatccgtgcaagttaggtttcttgttaatggcc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4354 ttttcattcggaggagttgggtgaccatatccgtgcaagttaggtttcttgttaatggcc 4413 Query: 569 agatcccaaccacgaccaccgtttaatttcatccaatcgtattctccgtccaatttctgt 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4414 agatcccaaccacgaccaccgtttaatttcatccaatcgtattctccgtccaatttctgt 4473 Query: 629 cctaattcatccaatactgacaataatagtttacggtaaccttcataatccggagtctct 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4474 cctaattcatccaatactgacaataatagtttacggtaaccttcataatccggagtctct 4533 Query: 689 tcgaaacccaagtttcttacaatttccaaataacgaccaaattgaactggtaacccttgt 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4534 tcgaaacccaagtttcttacaatttccaaataacgaccaaattgaactggtaacccttgt 4593 Query: 749 gataaatcgtacacgtttgtttgatctctttttttcaccaatcttttcatatttcaattt 808 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 4594 gataaatcgtacacgtttg-ttgatctctttttttcaccaatcttttcatatttcaactt 4652 Query: 809 attataagctgctttttacccttgccatggtaattgacctcttaagaaatagaaaaatac 868 ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4653 attattagctgcttttaacccttgccatggtaattgacctcttaggaaatagaaaaatac 4712 Query: 869 gtgtccccaaggcttccatatcgnnctctttctactttgttcacga 914 |||| ||||| |||||||||||| ||| ||||||||||||||||| Sbjct: 4713 gtgt-cccaatgcttccatatcg-tctc-ttctactttgttcacga 4755 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7106 Number of Sequences: 1807 Number of extensions: 7106 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)