BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZC06FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1592 1584 0.0 >3x_Contig1592 Length = 12307 Score = 1584 bits (799), Expect = 0.0 Identities = 838/849 (98%), Gaps = 2/849 (0%) Strand = Plus / Plus Query: 85 tatgggatctgagtctccttccacttgttcattttcttgttcttccttcaaaatatcaag 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3141 tatgggatctgagtctccttccacttgttcattttcttgttcttccttcaaaatatcaag 3200 Query: 145 taacggatcatcataatcagggaacgcaagacctgtgtcaatgaagggtatttctggatt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3201 taacggatcatcataatcagggaacgcaagacctgtgtcaatgaagggtatttctggatt 3260 Query: 205 ttgcatattactcgacaccatattgctcagtggggtgttgaagttccaatacatcccgtc 264 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3261 ttgcatattacgcgacaccatattgctcagtggggtgttgaagttccaatacatcccgtc 3320 Query: 265 agccttggccggactattcgtgttattagtggttgtgctatagttgttatccttctgttt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3321 agccttggccggactattcgtgttattagtggttgtgctatagttgttatccttctgttt 3380 Query: 325 agtaattggtgaggcactgtccaagtccagatcaaacagctggtcagttctgaatcctag 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3381 agtaattggtgaggcactgtccaagtccagatcaaacagctggtcagttctgaatcctag 3440 Query: 385 ttgaccaaaactaggttgttgccaagcagaaacacttgaatcgttatccaaaccattcgg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3441 ttgaccaaaactaggttgttgccaagcagaaacacttgaatcgttatccaaaccattcgg 3500 Query: 445 cgttgcttgagaatgagagctatcattgtattgtttatcaacactgaactgattggatac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3501 cgttgcttgagaatgagagctatcattgtattgtttatcaacactgaactgattggatac 3560 Query: 505 cgcatttacagaatcgtggttattcaaagcagaggcggatgcagagtcatgtagaggtgc 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3561 cgcatttacagaatcgtggttattcaaagcagaggcggatgcagagtcatgtagaggtgc 3620 Query: 565 agaggaagacagatccttgctgttaattttattattgttgtgattagtaatattaacatt 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3621 agaggaagacagatccttgctgttaattttattattgttgtgattagtaatattaacatt 3680 Query: 625 actattggatttcggtttcaggaggtctgaagaggacggtgttgaaacagggcttgcttt 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3681 actattggatttcggtttcaggaggtctgaagaggacggtgttgaaacagggcttgcttt 3740 Query: 685 tggtattgggttagactttgtgccgcatgccatgctcagtttggagcagaaactagaaac 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3741 tggtattgggttagactttgtgccgcatgccatgctcagtttggagcagaaactagaaac 3800 Query: 745 agattcatcgaactgcgaatcaaaatcgaattccgaagtgacatttgactgagtctggta 804 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3801 agattcatcgaactgcgaatcaaaatcgaattccgaagtgacatttgactgagtctggta 3860 Query: 805 caaatttagagtatttgagtgttttcttgacgacagccccattacgttagaaggtgacga 864 ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 3861 caaatttagagtatttgagtgttttcttgacgacagcccattaacgttagaaggtgacga 3920 Query: 865 tgaaagagttgg-aatacntggacgagaatgggtcanatttgtactgctgacgctcttgt 923 || ||||||||| ||||| | |||||||||| ||| ||||||||||||||||||||||| Sbjct: 3921 tg-aagagttggaaatactggaacgagaatggttcaaatttgtactgctgacgctcttgt 3979 Query: 924 tattagcat 932 ||||||||| Sbjct: 3980 tattagcat 3988 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5945 Number of Sequences: 1807 Number of extensions: 5945 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)