BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZC08RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1420 1336 0.0 >3x_Contig1420 Length = 8324 Score = 1336 bits (674), Expect = 0.0 Identities = 755/774 (97%), Gaps = 6/774 (0%) Strand = Plus / Plus Query: 46 ttacaccatcgtaaaagaggaaggtttcagcgctttgtaccgtggtgtttcattgactgc 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2745 ttacaccatcgtaaaagaggaaggtttcagcgctttgtaccgtggtgtttcattgactgc 2804 Query: 106 tgctagacaagccaccaaccaaggtgctaatttcaccgtttactctaaattaaaagaatt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2805 tgctagacaagccaccaaccaaggtgctaatttcaccgtttactctaaattaaaagaatt 2864 Query: 166 cttgcaaggttatcataatcaagaaatgttgccaagttgggaaacctcattgattgggtt 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2865 cttgcaaggttatcataatcaagaaatgttgccaagttgggaaacctcattgattgggtt 2924 Query: 226 aatctcaggtgccattggtcccttctcaaatgcaccgttagataccatcaagacgagatt 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2925 aatctcaggtgccattggtcccttctcaaatgcaccgttagataccatcaagacgagatt 2984 Query: 286 gcaaaaggataaatctactaagaatatgtccggtctcaaaagaattaccatcattggtaa 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2985 gcaaaaggataaatctactaagaatatgtccggtctcaaaagaattaccatcattggtaa 3044 Query: 346 acaattgatccaagaagaaggtttccgtgccctatataaaggtatcaccccaagagtgat 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3045 acaattgatccaagaagaaggtttccgtgccctatataaaggtatcaccccaagagtgat 3104 Query: 406 gcgtgtggctccaggtcaagctgtcactttcactgcttatgaattcattcgtaaagaatt 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3105 gcgtgtggctccaggtcaagctgtcactttcactgcttatgaattcattcgtaaagaatt 3164 Query: 466 ggagaagaccggtgtattttgaatcgatctaatttatggttctcaccatcatttcttttc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3165 ggagaagaccggtgtattttgaatcgatctaatttatggttctcaccatcatttcttttc 3224 Query: 526 cttc-atcatgctcctactaccatttctccctctctcattcaagacttctcaatcataat 584 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3225 cttcaatcatgctcctactaccatttctccctctctcattcaagacttctcaatcataat 3284 Query: 585 tatagattttgattattgcattagaattttgatatattcataaaggtgtttttcacaaac 644 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3285 tatagattttgattattgcattagaattttgatatattcataaaggtgttttccacaaac 3344 Query: 645 taagagaatggttaaagagacaaaacttcttgaagtatttcaagaagaact-aaaatatt 703 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3345 taagagaatggttaaagagacaaaacttcttgaagtatttcaagaagaactaaaaatatt 3404 Query: 704 tccacgcatcattatcgttctttctgttaacccattgaacatttcacccattaaaattca 763 ||||||||||||| |||| ||||||||| ||| |||||| |||||||| ||||||||| Sbjct: 3405 cccacgcatcatta-cgtttcttctgttaaaccaatgaacaattcacccaataaaattca 3463 Query: 764 gatttatttatgagaccccatttgaaagataccccaaaatgttattgagatgct 817 || ||| |||||||| | || |||||||||| | |||||||||| ||||||||| Sbjct: 3464 ga-ttaattatgaga-cgcagttgaaagataacacaaaatgtta-tgagatgct 3514 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,461 Number of Sequences: 1807 Number of extensions: 16461 Number of successful extensions: 554 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)