BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZC11FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1063 1586 0.0 >3x_Contig1063 Length = 5012 Score = 1586 bits (800), Expect = 0.0 Identities = 839/849 (98%), Gaps = 3/849 (0%) Strand = Plus / Plus Query: 86 tactcaaagataaacagccgctagttatacaattaaactatttggttaccaactggaatt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3474 tactcaaagataaacagccgctagttatacaattaaactatttggttaccaactggaatt 3533 Query: 146 ctttgcagtctccggagtatataattagggacacggtacagaagaatctgatgtcaaaac 205 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3534 ctttgcagtctccggagtatataaatagggacacggtacagaagaatctgatgtcaaaac 3593 Query: 206 tctctgattgaaataaatacacagtagcgaataatatgagttactcatcatattcatcga 265 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3594 tctctgattgaaaaaaaaacacagtagcgaataatatgagttactcatcatattcatcga 3653 Query: 266 aatggtcattacagaagagggaaactacattatacacacgttaatattcactcactcctt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3654 aatggtcattacagaagagggaaactacattatacacacgttaatattcactcactcctt 3713 Query: 326 gacgaagactgcagcagctcccataccagtaccgatacacatgctaacaacaccaatttg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3714 gacgaagactgcagcagctcccataccagtaccgatacacatgctaacaacaccaatttg 3773 Query: 386 accagcgtctaattcccttaatatggtagcgacttgtctggcaccagtgcagcccaaagg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3774 accagcgtctaattcccttaatatggtagcgacttgtctggcaccagtgcagcccaaagg 3833 Query: 446 atgacctaaggcaatcgcgcctccccttgggttcaatttcttcttgtcgatttttagatg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3834 atgacctaaggcaatcgcgcctccccttgggttcaatttcttcttgtcgatttttagatg 3893 Query: 506 gttgacacagaaaatggcctgccctgcaaaggcctcattaatctcgtaaacatcaacatc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3894 gttgacacagaaaatggcctgccctgcaaaggcctcattaatctcgtaaacatcaacatc 3953 Query: 566 gttgacatttaaaccacagtctttgaggactcttggaatcgcatatgctgggccaacacc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3954 gttgacatttaaaccacagtctttgaggactcttggaatcgcatatgctgggccaacacc 4013 Query: 626 catgatctcaggtggaacacctactgcctggaacgcaacgtacttaccaacgatttccaa 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4014 catgatctcaggtggaacacctactgcctggaacgcaacgtacttaccaacgatttccaa 4073 Query: 686 acccaatttcatggccatggatcttctcattagcaacacaccagcaacaccatctgatat 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4074 acccaatttcatggccatggatcttctcattagcaacacaccagcaacaccatctgatat 4133 Query: 746 ctgagaagcgttaccggcagttgtcacacctgtttccttcacaaatgcaggtttaatctt 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4134 ctgagaagcgttaccggcagttgtcacacctgtttccttcacaaatgcaggtttaatctt 4193 Query: 806 ttgtaacgattcgaaagtgacgccctttctaggaccttcgtnctgcgc-attatagatcc 864 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 4194 ttgtaacgattcgaaagtgacgccctttctaggaccttcgtcctgcgcaattatagatcc 4253 Query: 865 gtctggtagttcaatagggatgatttcatctttaaacaat-cctgggagaca-ncctttn 922 |||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| Sbjct: 4254 gtctggtagttcaatagggatgatttcatctttaaacaatccctgtgagacagccctttc 4313 Query: 923 cgctttata 931 ||||||||| Sbjct: 4314 cgctttata 4322 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5523 Number of Sequences: 1807 Number of extensions: 5523 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)