BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZD05FM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1608 1620 0.0 >3x_Contig1608 Length = 13037 Score = 1620 bits (817), Expect = 0.0 Identities = 855/867 (98%), Gaps = 2/867 (0%) Strand = Plus / Plus Query: 86 tgagatgctgccaaatacccgactctcttttgctggaaattgttactgctcataacctcc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6159 tgagatgctgccaaatacccgactctcttttgctggaaattgttactgctcataacctcc 6218 Query: 146 aaaacgtggaagttggcccacgccatatcaaaaccgtacatctccaaatatgttagtttc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6219 aaaacgtggaagttggcccacgccatatcaaaaccgtacatctccaaatatgttagtttc 6278 Query: 206 aaaacagcattttttttcatgttaaaatctggagatttcacttcctccctgcattctaca 265 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6279 aaaacagcatttgtcttcatgttaaaatctggagatttcacttcctccctgcattctaca 6338 Query: 266 atggcttggtttaagaagtcttggagttgctcgggcgtctcgttgttagatctgatccct 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6339 atggcttggtttaagaagtcttggagttgctcgggcgtctcgttgttagatctgatccct 6398 Query: 326 tttatcaaatcctttaaagatttctcaaaaaagatgccaaagggtcttagccgcttcttc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6399 tttatcaaatcctttaaagatttctcaaaaaagatgccaaagggtcttagccgcttcttc 6458 Query: 386 acgtcttcagcggatgtaccataaatactactcatatttctcgatacagcttgtactgtt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6459 acgtcttcagcggatgtaccataaatactactcatatttctcgatacagcttgtactgtt 6518 Query: 446 aacaattgactaacggcctcgattgactcttttgctcacttgttaattgatcaagctttc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6519 aacaattgactaacggcctcgattgactcttttgctcacttgttaattgatcaagctttc 6578 Query: 506 actttgaagcatttcgtacataggatcaatttctgattttttcagctttcctttatttta 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6579 actttgaagcatttcgtacataggatcaatttctgattttttcagctttcctttatttta 6638 Query: 566 ctgcaaagagaagccttagaggtctgaagccaactttgacatttaggtcagatcaactaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6639 ctgcaaagagaagccttagaggtctgaagccaactttgacatttaggtcagatcaactaa 6698 Query: 626 agatagacctaatgcaatatatacaattgtaaggaatcaaaagcatttaggtttaatttg 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6699 agatagacctaatgcaatatatacaattgtaaggaatcaaaagcatttaggtttaatttg 6758 Query: 686 gtacagtgtaatggatgagcatcgatcaaggacaccaagtatagatagtangaattatgc 745 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6759 gtacagtgtaatggatgagcatcgatcaaggacaccaagtatagatagtaggaattatgc 6818 Query: 746 tattccagaagcggattacctnccngcaggcattgacatagatagaaacggtgtgtctga 805 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 6819 tattccagaagcggattacctcccggcaggcattgacatagatagaaacggtgtgtctga 6878 Query: 806 atcagatgattcttccgatgatgatgctcaaagttcactatttccaacagaatccagtgg 865 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6879 atcagatgattcttccgatgatgatgctcaaagttcactatttccaacagaatccagtgg 6938 Query: 866 tacgttgtggatgaaccanatnncagatacgcctatgtttgactcaagt-aatttctatt 924 |||||||||||||||||| || ||||||||||||||||||||||||| |||||||||| Sbjct: 6939 tacgttgtggatgaaccaaatccaagatacgcctatgtttgactcaagtaaatttctatt 6998 Query: 925 tgagtcggtaaat-atgcaattaacga 950 ||||||||||||| ||||||| ||||| Sbjct: 6999 tgagtcggtaaataatgcaataaacga 7025 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6790 Number of Sequences: 1807 Number of extensions: 6790 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)