BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZD06FM1.SCF screened BAC_end (929 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1711 1439 0.0 >3x_Contig1711 Length = 15491 Score = 1439 bits (726), Expect = 0.0 Identities = 818/841 (97%), Gaps = 6/841 (0%) Strand = Plus / Minus Query: 86 taatttgattgcgatttctggatccaagaagtcataaacgttcttaccatctaagatttc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3773 taatttgattgcgatttctggatccaagaagtcataaacgttcttaccatctaagatttc 3714 Query: 146 tggcatgacatcgttcttccattcatcgtcttccaatagatacttgtccttcaaattaac 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3713 tggcatgacatcgttcttccattcatcgtcttccaatagatacttgtccttcaaattaac 3654 Query: 206 gttgtatacattttccccaccgttttcgatttcaatttctttagccaattttcttctgtt 265 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3653 gttgtatacaccggccccaccgttttcgatttcaatttctttagccaattttcttctgtt 3594 Query: 266 tggatcttctggatcatatttcttcatcttagcgatggcttctggaatatatggagttct 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3593 tggatcttctggatcatatttcttcatcttagcgatggcttctggaatatatggagttct 3534 Query: 326 gtcaataccatcatcacgcttttgaggttgagcgacgtggatcttgtttaagacgttagt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3533 gtcaataccatcatcacgcttttgaggttgagcgacgtggatcttgtttaagacgttagt 3474 Query: 386 gattctagcttgagattttagcttgttttcaattctggaagccaacaacttttcacaagc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3473 gattctagcttgagattttagcttgttttcaattctggaagccaacaacttttcacaagc 3414 Query: 446 cttgtttctaacagccataacgttatcttcttcatgacaagaagtggtcatgatttcaac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3413 cttgtttctaacagccataacgttatcttcttcatgacaagaagtggtcatgatttcaac 3354 Query: 506 acctggaacttccaaaacagtatccaaaagtttcttacgttcttcgtctaaatctt-cag 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3353 acctggaacttccaaaacagtatccaaaagtttcttacgttcttcgtctaaatcttacag 3294 Query: 565 gtttaatgatatcagtcttgttaatgacgaccatgacggatttattggcaaacaatggtt 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3293 gtttaatgatatcagtcttgttaatgacgaccatgacggatttattggcaaacaatggtt 3234 Query: 625 tgatcgaatggaataatttgacttgagcttcaatagagaaaccacactgttctgatagat 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3233 tgatcgaatggaataatttgacttgagcttcaatagagaaaccacactgttctgatagat 3174 Query: 685 ccatgaagtacataacagtagaacgcanatgagcaatagcataaatggattgcatttcga 744 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3173 ccatgaagtacataacagtagaacgcaaatgagcaatagcataaatggattgcatttcga 3114 Query: 745 cgttgttcatttcatccgtaggtctatccaagatacctggagtatcaatcgcttgggatc 804 |||| || ||||||||| ||||||||||||||||||||||| ||| ||| | |||| || Sbjct: 3113 cgtttttgatttcatccttaggtctatccaagatacctggattatgaatgggttggaatg 3054 Query: 805 tcaagtatttataatcaaaatgacccacatatagcgacttggtgttgaaaagcat-aggt 863 ||||||||||||||| |||||||||||||||||||||||||||| || ||||||| |||| Sbjct: 3053 tcaagtatttataatgaaaatgacccacatatagcgacttggtggtg-aaagcataaggt 2995 Query: 864 tgcacttcgacatcagccttagtgatacattctc-agaaagaaggatttacccccatttg 922 ||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||| Sbjct: 2994 tgcacttcgacatcagccttagtgataca-tctcaagaaag-aggatttacccacatttg 2937 Query: 923 g 923 | Sbjct: 2936 g 2936 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7562 Number of Sequences: 1807 Number of extensions: 7562 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 929 length of database: 10,358,551 effective HSP length: 16 effective length of query: 913 effective length of database: 10,329,639 effective search space: 9430960407 effective search space used: 9430960407 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)