BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZD06RM1.SCF screened BAC_end (972 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1806 1251 0.0 >3x_Contig1806 Length = 53694 Score = 1251 bits (631), Expect = 0.0 Identities = 735/765 (96%), Gaps = 4/765 (0%) Strand = Plus / Minus Query: 48 actggaccaaacgaattaaaaggaatgatgatttatgaagacggaagctcgctttttatt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35704 actggaccaaacgaattaaaaggaatgatgatttatgaagacggaagctcgctttttatt 35645 Query: 108 ggtaaacattccggtgatatcatagaaggtacaattcaagaggatgggtccttgaaattg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35644 ggtaaacattccggtgatatcatagaaggtacaattcaagaggatgggtccttgaaattg 35585 Query: 168 ggcactggagagttcattgggataaacaagaactatctaactttaaccactaactatacc 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35584 ggcactggagagttcattgggataaacaagaactatctaactttaaccactaactatacc 35525 Query: 228 caatacgctacgccatttgctatcaatggggatggatatttgacgctgtatggagaaaaa 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35524 caatacgctacgccatttgctatcaatggggatggatatttgacgctgtatggagaaaaa 35465 Query: 288 gaattcaaggccattccaagcggtcagacagacatatggattttggcttctaataatgct 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35464 gaattcaaggccattccaagcggtcagacagacatatggattttggcttctaataatgct 35405 Query: 348 gtttcaacattggattcggtgcacacaactaaagtcaagtgtgttgactcagacggaaag 407 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 35404 gtttcaacattggattcggtgcacacaactaaggtcaagtgtgttgactcagacggaaag 35345 Query: 408 aaagttaataaatttaccgtcaacggcagtagtgcatctaaacttctcaacaaaaccgaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35344 aaagttaataaatttaccgtcaacggcagtagtgcatctaaacttctcaacaaaaccgaa 35285 Query: 468 ttattggctgtactcttcttttcctttagtgcttatgttctgttttgatatatattcaac 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35284 ttattggctgtactcttcttttcctttagtgcttatgttctgttttgatatatattcaac 35225 Query: 528 attactttgttaactncctttatgtatacagtaaagatcctattagcaattcgaatatta 587 ||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||| | Sbjct: 35224 attactttgttaactcccttattgtatacagtaaagatcctataagcaattcgaatataa 35165 Query: 588 ttattacatcatgctcagaatattagagaaagctttattaaagatcttncatattatcaa 647 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 35164 ttattacatcatgctcagaatattagagaagcttttattaaagatcttccatattatcaa 35105 Query: 648 tgcatcctaaaatac-ttttgataaaggcatgagtcgattttattca-ataagatacttc 705 |||||||| |||||| ||||||||| ||||||||||||||||||||| ||| |||||||| Sbjct: 35104 tgcatcct-aaatactttttgataagggcatgagtcgattttattcagataggatacttc 35046 Query: 706 gaaatcctagataagagtttgaagggttggtattgatgctttcattt-ttcatttgaaaa 764 ||||||||||||| ||||||| | ||| ||||||||||||||||| | ||| ||| || Sbjct: 35045 gaaatcctagatagtagtttgagtgtttgttattgatgctttcatttatacatatgagaa 34986 Query: 765 atagacaggggttgaatagttaaaaattgttgggggagcccgaaa 809 ||||||| |||||||||||||||||||||| |||||| ||||| Sbjct: 34985 gtagacagtagttgaatagttaaaaattgttgtgggagcacgaaa 34941 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8653 Number of Sequences: 1807 Number of extensions: 8653 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 972 length of database: 10,358,551 effective HSP length: 16 effective length of query: 956 effective length of database: 10,329,639 effective search space: 9875134884 effective search space used: 9875134884 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)