BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC9ZD09RM1.SCF screened BAC_end
         (972 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1485                                                        1281   0.0  

>3x_Contig1485 
          Length = 9830

 Score = 1281 bits (646), Expect = 0.0
 Identities = 838/886 (94%), Gaps = 14/886 (1%)
 Strand = Plus / Minus

                                                                        
Query: 49   ttatgtacgtgaaatacggtttcagcaattagatcgtagttgatttggccagaggtgaaa 108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9521 ttatgtacgtgaaatacggtttcagcaattagatcgtagttgatttggccagaggtgaaa 9462

                                                                        
Query: 109  aacttcgaatttgcagtaggtgttaaatacatgtcctcttcgttagtctctgcactatag 168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9461 aacttcgaatttgcagtaggtgttaaatacatgtcctcttcgttagtctctgcactatag 9402

                                                                        
Query: 169  ttcatttgctctctgcgaatcttgaagtttgtctcttttagtacatcatctaagaaataa 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9401 ttcatttgctctctgcgaatcttgaagtttgtctcttttagtacatcatctaagaaataa 9342

                                                                        
Query: 229  tcttgaatcgggaaagtacgtccttcaatgtgaattgattttaaatttttgaagaacgcc 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9341 tcttgaatcgggaaagtacgtccttcaatgtgaattgattttaaatttttgaagaacgcc 9282

                                                                        
Query: 289  ttgaaaacatcaacatttacagtggcactcataagaattaatttcattcctttgactttc 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9281 ttgaaaacatcaacatttacagtggcactcataagaattaatttcattcctttgactttc 9222

                                                                        
Query: 349  ttcaataaattcttcaataggataattattaaatctgtatctatggacctttcgtgaact 408
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9221 ttcaataaattcttcaataggataattattaaatctgtatctatggacctttcgtgaact 9162

                                                                        
Query: 409  tcatcgataacaaccacgcagtcattcaagaaagtgacatctccttgtagaatacgaaca 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9161 tcatcgataacaaccacgcagtcattcaagaaagtgacatctccttgtagaatacgaaca 9102

                                                                        
Query: 469  agaacaccagttgtcatgaatttaattctggtagcactttttgtcagattaacacctcta 528
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9101 agaacaccagttgtcatgaatttaattctggtagcactttttgtcagattaacacctcta 9042

                                                                        
Query: 529  ata-tataccctacttcatcaccacatttgacacaccgttcctgtgatacacgnctcgct 587
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||||
Sbjct: 9041 ataatataccctacttcatcaccacatttgacacaccgttcctgtgatacacgctccgct 8982

                                                                        
Query: 588  agaccaattgcagatatccttctaggctgtgtgcagattattgggacgtcttgttcatat 647
            ||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||
Sbjct: 8981 agaccaattgcagatatccttcttggctgtgtgcagattat--ggacgtcttgttcaaat 8924

                                                                        
Query: 648  cgncatgttgcatttaattatcaaggacaaattgaaccgacctgtgttgattttacccga 707
            || ||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 8923 cgccatgttgcattaaattatcaaggacaaattgaac-gacctgtgttgattt-acccga 8866

                                                                        
Query: 708  aaccagtttcaccctggaataatgaacaacatcatttagaatttataagctctacgattg 767
            | ||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||| |
Sbjct: 8865 a-ccagtttcacc-tgtaataa-gaacaacatcatt-agaatttataagctctacgatag 8810

                                                                        
Query: 768  gaattctgttttttcaaagcccgntagctttgaacgccgttcccctctaaataggaaatt 827
             |||||||| ||||| ||||| | ||||||||| ||| |||||| ||  | || | ||||
Sbjct: 8809 -aattctgtattttccaagcc-ggtagctttgagcgctgttccc-tcatagtatggaatt 8753

                                                                        
Query: 828  cattacttttcgggccctttcttatttcatctttcaact-tgaaaaccctttgatt-gac 885
            ||||||||||| | | ||||||   |||||||| ||||| ||||||||  |||||| |||
Sbjct: 8752 cattacttttctgcctctttctatattcatcttccaactctgaaaacctcttgattcgac 8693

                                                          
Query: 886  attttaaaggttctggcatggaatcttcttttttttttagggcttt 931
            | |||| ||| |||||||| ||||||||||||||| |||| |||||
Sbjct: 8692 aatttagaggctctggcattgaatcttctttttttattagtgcttt 8647


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9406
Number of Sequences: 1807
Number of extensions: 9406
Number of successful extensions: 82
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)