BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZD09RM1.SCF screened BAC_end (972 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1485 1281 0.0 >3x_Contig1485 Length = 9830 Score = 1281 bits (646), Expect = 0.0 Identities = 838/886 (94%), Gaps = 14/886 (1%) Strand = Plus / Minus Query: 49 ttatgtacgtgaaatacggtttcagcaattagatcgtagttgatttggccagaggtgaaa 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9521 ttatgtacgtgaaatacggtttcagcaattagatcgtagttgatttggccagaggtgaaa 9462 Query: 109 aacttcgaatttgcagtaggtgttaaatacatgtcctcttcgttagtctctgcactatag 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9461 aacttcgaatttgcagtaggtgttaaatacatgtcctcttcgttagtctctgcactatag 9402 Query: 169 ttcatttgctctctgcgaatcttgaagtttgtctcttttagtacatcatctaagaaataa 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9401 ttcatttgctctctgcgaatcttgaagtttgtctcttttagtacatcatctaagaaataa 9342 Query: 229 tcttgaatcgggaaagtacgtccttcaatgtgaattgattttaaatttttgaagaacgcc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9341 tcttgaatcgggaaagtacgtccttcaatgtgaattgattttaaatttttgaagaacgcc 9282 Query: 289 ttgaaaacatcaacatttacagtggcactcataagaattaatttcattcctttgactttc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9281 ttgaaaacatcaacatttacagtggcactcataagaattaatttcattcctttgactttc 9222 Query: 349 ttcaataaattcttcaataggataattattaaatctgtatctatggacctttcgtgaact 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9221 ttcaataaattcttcaataggataattattaaatctgtatctatggacctttcgtgaact 9162 Query: 409 tcatcgataacaaccacgcagtcattcaagaaagtgacatctccttgtagaatacgaaca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161 tcatcgataacaaccacgcagtcattcaagaaagtgacatctccttgtagaatacgaaca 9102 Query: 469 agaacaccagttgtcatgaatttaattctggtagcactttttgtcagattaacacctcta 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9101 agaacaccagttgtcatgaatttaattctggtagcactttttgtcagattaacacctcta 9042 Query: 529 ata-tataccctacttcatcaccacatttgacacaccgttcctgtgatacacgnctcgct 587 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 9041 ataatataccctacttcatcaccacatttgacacaccgttcctgtgatacacgctccgct 8982 Query: 588 agaccaattgcagatatccttctaggctgtgtgcagattattgggacgtcttgttcatat 647 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 8981 agaccaattgcagatatccttcttggctgtgtgcagattat--ggacgtcttgttcaaat 8924 Query: 648 cgncatgttgcatttaattatcaaggacaaattgaaccgacctgtgttgattttacccga 707 || ||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 8923 cgccatgttgcattaaattatcaaggacaaattgaac-gacctgtgttgattt-acccga 8866 Query: 708 aaccagtttcaccctggaataatgaacaacatcatttagaatttataagctctacgattg 767 | ||||||||||| || ||||| ||||||||||||| ||||||||||||||||||||| | Sbjct: 8865 a-ccagtttcacc-tgtaataa-gaacaacatcatt-agaatttataagctctacgatag 8810 Query: 768 gaattctgttttttcaaagcccgntagctttgaacgccgttcccctctaaataggaaatt 827 |||||||| ||||| ||||| | ||||||||| ||| |||||| || | || | |||| Sbjct: 8809 -aattctgtattttccaagcc-ggtagctttgagcgctgttccc-tcatagtatggaatt 8753 Query: 828 cattacttttcgggccctttcttatttcatctttcaact-tgaaaaccctttgatt-gac 885 ||||||||||| | | |||||| |||||||| ||||| |||||||| |||||| ||| Sbjct: 8752 cattacttttctgcctctttctatattcatcttccaactctgaaaacctcttgattcgac 8693 Query: 886 attttaaaggttctggcatggaatcttcttttttttttagggcttt 931 | |||| ||| |||||||| ||||||||||||||| |||| ||||| Sbjct: 8692 aatttagaggctctggcattgaatcttctttttttattagtgcttt 8647 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9406 Number of Sequences: 1807 Number of extensions: 9406 Number of successful extensions: 82 Number of sequences better than 1.0e-20: 1 length of query: 972 length of database: 10,358,551 effective HSP length: 16 effective length of query: 956 effective length of database: 10,329,639 effective search space: 9875134884 effective search space used: 9875134884 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)