BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC9ZE03FM1.SCF screened BAC_end
         (903 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1679                                                        1552   0.0  

>3x_Contig1679 
          Length = 11609

 Score = 1552 bits (783), Expect = 0.0
 Identities = 809/818 (98%)
 Strand = Plus / Minus

                                                                        
Query: 86   tttattttacatgaaacatgtttgagacatcttaaaagttaaaacgtctgagatgccact 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4864 tttattttacatgaaacatgtttgagacatcttaaaagttaaaacgtctgagatgccact 4805

                                                                        
Query: 146  tctaaccgtaaacaggcagataagaaagagagcagagaaaaatttctatcgtgtttcacc 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4804 tctaaccgtaaacaggcagataagaaagagagcagagaaaaatttctatcgtgtttcacc 4745

                                                                        
Query: 206  ataaactagctttattgctacccttgatgtacaaaatatggcgacttttgttatcgaact 265
            |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4744 ataaactagctccaatgctacccttgatgtacaaaatatggcgacttttgttatcgaact 4685

                                                                        
Query: 266  ctgcatttgataatattacttaattttatcgagatataatactgatttgaacaatcgagt 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4684 ctgcatttgataatattacttaattttatcgagatataatactgatttgaacaatcgagt 4625

                                                                        
Query: 326  ttccatgtttacataatgttccacacatcttcacaaccatgacagaacttggagcatgca 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4624 ttccatgtttacataatgttccacacatcttcacaaccatgacagaacttggagcatgca 4565

                                                                        
Query: 386  accgaagcagataatggatagttggatagaccaatcttttcatccacaaattcatctgca 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4564 accgaagcagataatggatagttggatagaccaatcttttcatccacaaattcatctgca 4505

                                                                        
Query: 446  aaattatctttacccctggccatggcaccaacaaacacacatatactttcatcatcatcc 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 aaattatctttacccctggccatggcaccaacaaacacacatatactttcatcatcatcc 4445

                                                                        
Query: 506  aacttttccacgtagtcttgcactcttatgacaggtgcatcgaaggacaaggtgatttta 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 aacttttccacgtagtcttgcactcttatgacaggtgcatcgaaggacaaggtgatttta 4385

                                                                        
Query: 566  cgacatttggttggtaggtggtcggtaattggattcttaatgaccttcaacaatttttct 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384 cgacatttggttggtaggtggtcggtaattggattcttaatgaccttcaacaatttttct 4325

                                                                        
Query: 626  tcagagttaactgatctgatggatagtttatgcaataattggaccattaaacctgagaaa 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4324 tcagagttaactgatctgatggatagtttatgcaataattggaccattaaacctgagaaa 4265

                                                                        
Query: 686  cgtttgaaagttcttggaattcgtacagtagggtttaactcgataagaacgcctcgactg 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4264 cgtttgaaagttcttggaattcgtacagtagggtttaactcgataagaacgcctcgactg 4205

                                                                        
Query: 746  gtctgaatataaacttgaagtttaccagcctttattacaggagaatctaatagggttagg 805
            ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| 
Sbjct: 4204 gtctgaatataaacttgaagtttaccagccttatttacaggagaatctaatagggttaga 4145

                                                                        
Query: 806  agacattgatgagtaatgtcgggtctagcttcgcttatatctcttcccattttcttcaac 865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4144 agacattgatgagtaatgtcgggtctagcttcgcttatatctcttcccattttcttcaac 4085

                                                  
Query: 866  anactttgatgatcatcacaattcaacaaaacgtattt 903
            | || |||||||||||||||||||||||| ||||||||
Sbjct: 4084 aaaccttgatgatcatcacaattcaacaagacgtattt 4047


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6919
Number of Sequences: 1807
Number of extensions: 6919
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 903
length of database: 10,358,551
effective HSP length: 16
effective length of query: 887
effective length of database: 10,329,639
effective search space: 9162389793
effective search space used: 9162389793
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)