BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZE04FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig409 119 1e-26 >3x_Contig409 Length = 2404 Score = 119 bits (60), Expect = 1e-26 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 836 ccactcttgttatcgatgatcaacattccgttagtgtttgtagc-acagccaaagtgtta 894 ||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||| Sbjct: 2 ccactcttgttatcgatgatcaacaattcgttagtgtttgtagcaacagccaaagtgtta 61 Query: 895 tgagaaaaaaccgcacattt 914 ||||| |||||||||||||| Sbjct: 62 tgagagaaaaccgcacattt 81 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6850 Number of Sequences: 1807 Number of extensions: 6850 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)