BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZE07FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1294 1594 0.0 >3x_Contig1294 Length = 6938 Score = 1594 bits (804), Expect = 0.0 Identities = 825/831 (99%), Gaps = 1/831 (0%) Strand = Plus / Minus Query: 90 attagccactgtattctttcttctccaatgggttaatgctaataaatatgtacagataca 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5924 attagccactgtattctttcttctccaatgggttaatgctaataaatatgtacagataca 5865 Query: 150 tactaaaagttacaaattcaataactcaacgcaggttgaagttatccattattagtttcg 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5864 tactaaaagttacaaattcaataactcaacgcaggttgaagttatccattattagtttcg 5805 Query: 210 ggatacagagcaccccatttatctcatcatctatcaattttagagcggatattcccatca 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5804 ggatacagagcaccccatttatctcatcatctatcaattttagagcggatattcccatca 5745 Query: 270 tgctatgatatatatcagggtcatcttgatcattcttggcaaatccacccaccatcttat 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5744 tgctatgatatatatcagggtcatcttgatcattcttggcaaatccacccaccatcttat 5685 Query: 330 tctgagtttgattcagtaaataatctcgtatcagtggaacatcaataagctgactccaac 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5684 tctgagtttgattcagtaaataatctcgtatcagtggaacatcaataagctgactccaac 5625 Query: 390 gttggggctctaagattcttaaagaatttaaacaccaaaacgcgtagcacgtatccgcaa 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 gttggggctctaagattcttaaagaatttaaacaccaaaacgcgtagcacgtatccgcaa 5565 Query: 450 gtttattttctctcccgttaaacccacctgagtcatccggatcgtaatcgtcgtttaaat 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5564 gtttattttctctcccgttaaacccacctgagtcatccggatcgtaatcgtcgtttaaat 5505 Query: 510 cctgttcaacaaagacaccaatagcagaaacctgtctgttcaccaaccaatgaagagtat 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5504 cctgttcaacaaagacaccaatagcagaaacctgtctgttcaccaaccaatgaagagtat 5445 Query: 570 cctgcctaaacgaggcaggaatgttttgtagttgatttagtagagatagagcagataacg 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5444 cctgcctaaacgaggcaggaatgttttgtagttgatttagtagagatagagcagataacg 5385 Query: 630 cgcatgatgtgtatccaccgtgtggctcgttccagtcaccaaatccccccattgtgcact 689 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5384 cgcatgatgtgtatccaccgtgtggctcgttccagtcaccaaatccccccattgtg-act 5326 Query: 690 gacgtgacatgatatattgtagcagcttagaaacgttaatataccgagagaaatccgatt 749 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5325 gacgtgacatgatatattgtagcagcttagaaacgttaatataccgagagaaatccgatt 5266 Query: 750 ctgatcgacatccgataagatataggatcgatactgcaatataacagaacctcagatcat 809 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5265 ctgatcgacatccgataagatataggatcgatactgcaatataacagaacctcagatcat 5206 Query: 810 gggaatcgaacttcgatggatatccagcattatccagaaaaagagtaaatgacccatcan 869 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5205 gggaatcgaacttcgatggatatccagcattatccagaaaagaggtaaatgacccatcag 5146 Query: 870 gtaactgacaagatgagatgaatttgcccaacgtatcaccgttcaacttct 920 ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5145 gtaactgacaagatgagatgaatttgcccaacgtatcacggttcaacttct 5095 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6078 Number of Sequences: 1807 Number of extensions: 6078 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)