BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZF01FM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1770 1431 0.0 >3x_Contig1770 Length = 29267 Score = 1431 bits (722), Expect = 0.0 Identities = 804/825 (97%), Gaps = 6/825 (0%) Strand = Plus / Minus Query: 85 atcaattattatagaaagacgggagaaacagacagctccagaccaaaattacccgttggt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8035 atcaattattatagaaagacgggagaaacagacagctccagaccaaaattacccgttggt 7976 Query: 145 gagactcatgtattaggtgtgcaggataaatcaccattttggaattttggtttcgtcagt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7975 gagactcatgtattaggtgtgcaggataaatcaccattttggaattttggtttcgtcagt 7916 Query: 205 ccaggaaacattgttcccactttatataacaatatggtcagagcccccgttttcaaacat 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7915 ccaggaaacattgttcccactttatataacaatatggtcagagcccccgttttcaaacat 7856 Query: 265 gaggtctctaagaccgatttccttctggtgaaaagtcttggtaatgggtccggtaacaga 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7855 gaggtctctaagaccgatttccttctggtgaaaagtcttggtaatgggtccggtaacaga 7796 Query: 325 ttctatttgcgtcaaattaatcatctctttgctgtcggtcaaacgttcccagtggtcgaa 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7795 ttctatttgcgtcaaattaatcatctctttgctgtcggtcaaacgttcccagtggtcgaa 7736 Query: 385 gttcctggtccgaattctagaaaggttactgctatgggtaagaaccgtttgaggatggtt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7735 gttcctggtccgaattctagaaaggttactgctatgggtaagaaccgtttgaggatggtt 7676 Query: 445 gtgtatcgtattttgaacaaatctccggaaaacagactgttagtgaaacaggtggctcgt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7675 gtgtatcgtattttgaacaaatctccggaaaacagactgttagtgaaacaggtggctcgt 7616 Query: 505 catttcccagaacaaaatgatatgcaaaacagacaaagattaaaggaattcatgaagtat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7615 catttcccagaacaaaatgatatgcaaaacagacaaagattaaaggaattcatgaagtat 7556 Query: 565 caacgtgaaggtgatgatcaaggtttctggaaactaaaggagggagaagttttactggat 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7555 caacgtgaaggtgatgatcaaggtttctggaaactaaaggagggagaagttttactggat 7496 Query: 625 aacgaaaacgtgaagaaaatggttactcctgaagatgtttcactcgttgaatccatgtat 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7495 aacgaaaacgtgaagaaaatggttactcctgaagatgtttcactcgttgaatccatgtat 7436 Query: 685 tatggtcaacagttccaggaagatattgatttctacaacttcgatgaaagagctaaggag 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7435 tatggtcaacagttccaggaagatattgatttctacaacttcgatgaaagagctaaggag 7376 Query: 745 ttggagggagacttaaatatttggaatgctaccaaaaaatttcttggatgctacacagat 804 ||||||| |||||| |||||||||||||| || ||||||||| ||||||||||||| Sbjct: 7375 ttggaggagaacttaatattttggaatgctacc-aagaatttcttgaatgctacacagat 7317 Query: 805 gagagcattgattcaaatacatggacctgttggatcctactggtttgtggtgaaagtttt 864 ||||||| ||||||||||||||||||||| | ||||||||||| |||||||| ||| ||| Sbjct: 7316 gagagcaatgattcaaatacatggacctggt-gatcctactgg-ttgtggtg-aaggttt 7260 Query: 865 ttcgttttttgaaaaacctctataaaggtggggtttgtaaaatcc 909 ||||||||| ||||||||||| |||| ||||||||||||||| Sbjct: 7259 ttcgttttt--gaaaacctctatgaagggtgggtttgtaaaatcc 7217 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6511 Number of Sequences: 1807 Number of extensions: 6511 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)