BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC9ZF01FM1.SCF screened BAC_end
         (916 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1770                                                        1431   0.0  

>3x_Contig1770 
          Length = 29267

 Score = 1431 bits (722), Expect = 0.0
 Identities = 804/825 (97%), Gaps = 6/825 (0%)
 Strand = Plus / Minus

                                                                        
Query: 85   atcaattattatagaaagacgggagaaacagacagctccagaccaaaattacccgttggt 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8035 atcaattattatagaaagacgggagaaacagacagctccagaccaaaattacccgttggt 7976

                                                                        
Query: 145  gagactcatgtattaggtgtgcaggataaatcaccattttggaattttggtttcgtcagt 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7975 gagactcatgtattaggtgtgcaggataaatcaccattttggaattttggtttcgtcagt 7916

                                                                        
Query: 205  ccaggaaacattgttcccactttatataacaatatggtcagagcccccgttttcaaacat 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7915 ccaggaaacattgttcccactttatataacaatatggtcagagcccccgttttcaaacat 7856

                                                                        
Query: 265  gaggtctctaagaccgatttccttctggtgaaaagtcttggtaatgggtccggtaacaga 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7855 gaggtctctaagaccgatttccttctggtgaaaagtcttggtaatgggtccggtaacaga 7796

                                                                        
Query: 325  ttctatttgcgtcaaattaatcatctctttgctgtcggtcaaacgttcccagtggtcgaa 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7795 ttctatttgcgtcaaattaatcatctctttgctgtcggtcaaacgttcccagtggtcgaa 7736

                                                                        
Query: 385  gttcctggtccgaattctagaaaggttactgctatgggtaagaaccgtttgaggatggtt 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7735 gttcctggtccgaattctagaaaggttactgctatgggtaagaaccgtttgaggatggtt 7676

                                                                        
Query: 445  gtgtatcgtattttgaacaaatctccggaaaacagactgttagtgaaacaggtggctcgt 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7675 gtgtatcgtattttgaacaaatctccggaaaacagactgttagtgaaacaggtggctcgt 7616

                                                                        
Query: 505  catttcccagaacaaaatgatatgcaaaacagacaaagattaaaggaattcatgaagtat 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7615 catttcccagaacaaaatgatatgcaaaacagacaaagattaaaggaattcatgaagtat 7556

                                                                        
Query: 565  caacgtgaaggtgatgatcaaggtttctggaaactaaaggagggagaagttttactggat 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7555 caacgtgaaggtgatgatcaaggtttctggaaactaaaggagggagaagttttactggat 7496

                                                                        
Query: 625  aacgaaaacgtgaagaaaatggttactcctgaagatgtttcactcgttgaatccatgtat 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7495 aacgaaaacgtgaagaaaatggttactcctgaagatgtttcactcgttgaatccatgtat 7436

                                                                        
Query: 685  tatggtcaacagttccaggaagatattgatttctacaacttcgatgaaagagctaaggag 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7435 tatggtcaacagttccaggaagatattgatttctacaacttcgatgaaagagctaaggag 7376

                                                                        
Query: 745  ttggagggagacttaaatatttggaatgctaccaaaaaatttcttggatgctacacagat 804
            |||||||   ||||||   |||||||||||||| || ||||||||| |||||||||||||
Sbjct: 7375 ttggaggagaacttaatattttggaatgctacc-aagaatttcttgaatgctacacagat 7317

                                                                        
Query: 805  gagagcattgattcaaatacatggacctgttggatcctactggtttgtggtgaaagtttt 864
            ||||||| ||||||||||||||||||||| | ||||||||||| |||||||| ||| |||
Sbjct: 7316 gagagcaatgattcaaatacatggacctggt-gatcctactgg-ttgtggtg-aaggttt 7260

                                                         
Query: 865  ttcgttttttgaaaaacctctataaaggtggggtttgtaaaatcc 909
            |||||||||   ||||||||||| ||||  |||||||||||||||
Sbjct: 7259 ttcgttttt--gaaaacctctatgaagggtgggtttgtaaaatcc 7217


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6511
Number of Sequences: 1807
Number of extensions: 6511
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)