BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC9ZF04FM1.SCF screened BAC_end
         (914 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1625                                                        1578   0.0  
3x_Contig1746                                                         145   2e-34
3x_Contig1671                                                         145   2e-34
3x_Contig1276                                                         145   2e-34
3x_Contig384                                                          145   2e-34

>3x_Contig1625 
          Length = 13618

 Score = 1578 bits (796), Expect = 0.0
 Identities = 819/828 (98%)
 Strand = Plus / Plus

                                                                        
Query: 86   tgaaggaaagaagagcaaagaaggaagaacaagaaaggtacgatagattggctgccaaga 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8056 tgaaggaaagaagagcaaagaaggaagaacaagaaaggtacgatagattggctgccaaga 8115

                                                                        
Query: 146  tgcacgctaagaaggtcgatagactaagaagaagagaaaagagaaataaggctttgaaag 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8116 tgcacgctaagaaggtcgatagactaagaagaagagaaaagagaaataaggctttgaaag 8175

                                                                        
Query: 206  agcgttgagacataaagtcataaatactgtataatagaataaagacatatctgcattaac 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8176 agcgttgagacataaagtcataaatactgtataatagaataaagacatatctgcattaac 8235

                                                                        
Query: 266  gatttaggcttgttccgtcctccgcaattgtatatactgacgatgaaaaagtatgtggga 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8236 gatttaggcttgttccgtcctccgcaattgtatatactgacgatgaaaaagtatgtggga 8295

                                                                        
Query: 326  aattgacaaaaattaaaaccaatttgctgcttctgtggatcgaacacaggaccttatgaa 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8296 aattgacaaaaattaaaaccaatttgctgcttctgtggatcgaacacaggaccttatgaa 8355

                                                                        
Query: 386  cttcagtcatacgctctcccaactgagctaaagcagccaaattaattacaagaaccagtt 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8356 cttcagtcatacgctctcccaactgagctaaagcagccaaattaattacaagaaccagtt 8415

                                                                        
Query: 446  ttctttcgctcaccttgcactaaaattactgttatggatatttctcaatgattttctaat 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8416 ttctttcgctcaccttgcactaaaattactgttatggatatttctcaatgattttctaat 8475

                                                                        
Query: 506  gatggatgtgagtgtcaacttaacgatagaacaggattaagtttatagtgtatgagatac 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8476 gatggatgtgagtgtcaacttaacgatagaacaggattaagtttatagtgtatgagatac 8535

                                                                        
Query: 566  gtctcggtacgctctgatatttcgaacggtgaatttattagtgctctgttaaaagggatc 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8536 gtctcggtacgctctgatatttcgaacggtgaatttattagtgctctgttaaaagggatc 8595

                                                                        
Query: 626  ttttgctcagtgccgttgaaataattgaaacaatgtcaaaggatttgggagagaatatcc 685
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 8596 ttttgctcagtgccgttgaaataattgaaacaatgtcaaaggatttgggagagattatcc 8655

                                                                        
Query: 686  attcggataaaggccatttactggagcttatagatgangatgttcagtcaatcaacgtaa 745
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 8656 attcggataaaggccatttactggagcttatagatgaggatgttcagtcaatcaacgtaa 8715

                                                                        
Query: 746  ttaaaaccaagcttcgagagcaatccaaggaccccgtaccgtctaaaaagaggaaaatga 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8716 ttaaaaccaagcttcgagagcaatccaaggaccccgtaccgtctaaaaagaggaaaatga 8775

                                                                        
Query: 806  acgattcgactagtgtcctagatggaataaatgaggaaagattcaggcaatataaccagg 865
            ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||
Sbjct: 8776 acgattcgactagtgtcctagatggaataaatgaggaagatttcaggcaatataaccagg 8835

                                                            
Query: 866  ctaagnatagagtgcgagaattctacanagaacagcatgagnaacaga 913
            ||||  ||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 8836 ctaaagatagagtgcgagaattctacaaagaacagcatgagaaacaga 8883


>3x_Contig1746 
          Length = 26672

 Score =  145 bits (73), Expect = 2e-34
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                         
Query: 350   tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 409
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12219 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 12160

                          
Query: 410   gagctaaagcagc 422
             |||||||||||||
Sbjct: 12159 gagctaaagcagc 12147


>3x_Contig1671 
          Length = 12265

 Score =  145 bits (73), Expect = 2e-34
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                        
Query: 350  tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5284 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 5225

                         
Query: 410  gagctaaagcagc 422
            |||||||||||||
Sbjct: 5224 gagctaaagcagc 5212


>3x_Contig1276 
          Length = 6662

 Score =  145 bits (73), Expect = 2e-34
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                       
Query: 350 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 409
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 692

                        
Query: 410 gagctaaagcagc 422
           |||||||||||||
Sbjct: 693 gagctaaagcagc 705


>3x_Contig384 
          Length = 1678

 Score =  145 bits (73), Expect = 2e-34
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                        
Query: 350  tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 1505

                         
Query: 410  gagctaaagcagc 422
            |||||||||||||
Sbjct: 1506 gagctaaagcagc 1518


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6759
Number of Sequences: 1807
Number of extensions: 6759
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 5
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)