BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZF04FM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1625 1578 0.0 3x_Contig1746 145 2e-34 3x_Contig1671 145 2e-34 3x_Contig1276 145 2e-34 3x_Contig384 145 2e-34 >3x_Contig1625 Length = 13618 Score = 1578 bits (796), Expect = 0.0 Identities = 819/828 (98%) Strand = Plus / Plus Query: 86 tgaaggaaagaagagcaaagaaggaagaacaagaaaggtacgatagattggctgccaaga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8056 tgaaggaaagaagagcaaagaaggaagaacaagaaaggtacgatagattggctgccaaga 8115 Query: 146 tgcacgctaagaaggtcgatagactaagaagaagagaaaagagaaataaggctttgaaag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8116 tgcacgctaagaaggtcgatagactaagaagaagagaaaagagaaataaggctttgaaag 8175 Query: 206 agcgttgagacataaagtcataaatactgtataatagaataaagacatatctgcattaac 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8176 agcgttgagacataaagtcataaatactgtataatagaataaagacatatctgcattaac 8235 Query: 266 gatttaggcttgttccgtcctccgcaattgtatatactgacgatgaaaaagtatgtggga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8236 gatttaggcttgttccgtcctccgcaattgtatatactgacgatgaaaaagtatgtggga 8295 Query: 326 aattgacaaaaattaaaaccaatttgctgcttctgtggatcgaacacaggaccttatgaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8296 aattgacaaaaattaaaaccaatttgctgcttctgtggatcgaacacaggaccttatgaa 8355 Query: 386 cttcagtcatacgctctcccaactgagctaaagcagccaaattaattacaagaaccagtt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8356 cttcagtcatacgctctcccaactgagctaaagcagccaaattaattacaagaaccagtt 8415 Query: 446 ttctttcgctcaccttgcactaaaattactgttatggatatttctcaatgattttctaat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8416 ttctttcgctcaccttgcactaaaattactgttatggatatttctcaatgattttctaat 8475 Query: 506 gatggatgtgagtgtcaacttaacgatagaacaggattaagtttatagtgtatgagatac 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8476 gatggatgtgagtgtcaacttaacgatagaacaggattaagtttatagtgtatgagatac 8535 Query: 566 gtctcggtacgctctgatatttcgaacggtgaatttattagtgctctgttaaaagggatc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8536 gtctcggtacgctctgatatttcgaacggtgaatttattagtgctctgttaaaagggatc 8595 Query: 626 ttttgctcagtgccgttgaaataattgaaacaatgtcaaaggatttgggagagaatatcc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 8596 ttttgctcagtgccgttgaaataattgaaacaatgtcaaaggatttgggagagattatcc 8655 Query: 686 attcggataaaggccatttactggagcttatagatgangatgttcagtcaatcaacgtaa 745 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 8656 attcggataaaggccatttactggagcttatagatgaggatgttcagtcaatcaacgtaa 8715 Query: 746 ttaaaaccaagcttcgagagcaatccaaggaccccgtaccgtctaaaaagaggaaaatga 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8716 ttaaaaccaagcttcgagagcaatccaaggaccccgtaccgtctaaaaagaggaaaatga 8775 Query: 806 acgattcgactagtgtcctagatggaataaatgaggaaagattcaggcaatataaccagg 865 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 8776 acgattcgactagtgtcctagatggaataaatgaggaagatttcaggcaatataaccagg 8835 Query: 866 ctaagnatagagtgcgagaattctacanagaacagcatgagnaacaga 913 |||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 8836 ctaaagatagagtgcgagaattctacaaagaacagcatgagaaacaga 8883 >3x_Contig1746 Length = 26672 Score = 145 bits (73), Expect = 2e-34 Identities = 73/73 (100%) Strand = Plus / Minus Query: 350 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12219 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 12160 Query: 410 gagctaaagcagc 422 ||||||||||||| Sbjct: 12159 gagctaaagcagc 12147 >3x_Contig1671 Length = 12265 Score = 145 bits (73), Expect = 2e-34 Identities = 73/73 (100%) Strand = Plus / Minus Query: 350 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5284 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 5225 Query: 410 gagctaaagcagc 422 ||||||||||||| Sbjct: 5224 gagctaaagcagc 5212 >3x_Contig1276 Length = 6662 Score = 145 bits (73), Expect = 2e-34 Identities = 73/73 (100%) Strand = Plus / Plus Query: 350 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 692 Query: 410 gagctaaagcagc 422 ||||||||||||| Sbjct: 693 gagctaaagcagc 705 >3x_Contig384 Length = 1678 Score = 145 bits (73), Expect = 2e-34 Identities = 73/73 (100%) Strand = Plus / Plus Query: 350 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1446 tgctgcttctgtggatcgaacacaggaccttatgaacttcagtcatacgctctcccaact 1505 Query: 410 gagctaaagcagc 422 ||||||||||||| Sbjct: 1506 gagctaaagcagc 1518 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6759 Number of Sequences: 1807 Number of extensions: 6759 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 5 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)