BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZG07RM1.SCF screened BAC_end (957 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1666 934 0.0 >3x_Contig1666 Length = 16162 Score = 934 bits (471), Expect = 0.0 Identities = 562/583 (96%), Gaps = 7/583 (1%) Strand = Plus / Plus Query: 38 aagcttgatatatgtactgaagtcatcaatcatttggtcaatcatcatcatggtaggctt 97 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12641 aagcttgatatatgtactgaagtcatcaatcatttggtcaatcatcatcatggtaggctt 12700 Query: 98 tttgagttttctagcgtattctaatctgattgatattatttcttggatcaaacgaagtgg 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12701 tttgagttttctagcgtattctaatctgattgatattatttcttggatcaaacgaagtgg 12760 Query: 158 aaacgttaaaagagaatgcaatttgtccaccggtaaaggtaagcgcatttcgtgaataga 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12761 aaacgttaaaagagaatgcaatttgtccaccggtaaaggtaagcgcatttcgtgaataga 12820 Query: 218 attttgttgcttcaaaaacaccaatttgctcttgaacatccaaggggcatgcttgaaaaa 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12821 attttgttgcttcaaaaacaccaatttgctcttgaacatccaaggggcatgcttgaaaaa 12880 Query: 278 gatctttttctgaaagataccttcgatgtccttctctttcataatttgttctgcgaaaga 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12881 gatctttttctgaaagataccttcgatgtccttctctttcataatttgttctgcgaaaga 12940 Query: 338 tctgtcatttttgaagataccttcagtgtctaacgaatctttcgtaaaagttacatccaa 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12941 tctgtcatttttgaagataccttcagtgtctaacgaatctttcgtaaaagttacatccaa 13000 Query: 398 atcatcattttgagtccattgtttcaatgcctctatctcatattgtaatccttcgtacga 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13001 atcatcattttgagtccattgtttcaatgcctctatctcatattgtaatccttcgtacga 13060 Query: 458 gtttatcaacgaattgaatgcttcaattctgcttac-aaattagaagttttggtttacag 516 ||||||||||||||||| |||||||||||||||||| |||||||| ||||||| |||||| Sbjct: 13061 gtttatcaacgaattgagtgcttcaattctgcttacaaaattagaggttttgg-ttacag 13119 Query: 517 gttttttgagatt-atattgggggagattttt-cattttccaacc-ctttggaaaattta 573 |||| | |||||| ||||| |||||||||||| || | ||||||| ||||| || ||||| Sbjct: 13120 gtttctcgagattcatatt-ggggagatttttccaatatccaaccactttgtaatattta 13178 Query: 574 ttaaaaag-attttgggcttttttatgacaacttcagggtttt 615 || || || ||||||| | || |||||||||||||||||||| Sbjct: 13179 ttcaatagtattttggcttcttctatgacaacttcagggtttt 13221 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,135 Number of Sequences: 1807 Number of extensions: 12135 Number of successful extensions: 86 Number of sequences better than 1.0e-20: 1 length of query: 957 length of database: 10,358,551 effective HSP length: 16 effective length of query: 941 effective length of database: 10,329,639 effective search space: 9720190299 effective search space used: 9720190299 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)