BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC9ZG10FM1.SCF screened BAC_end
         (923 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1631                                                        1388   0.0  

>3x_Contig1631 
          Length = 12284

 Score = 1388 bits (700), Expect = 0.0
 Identities = 775/799 (96%), Gaps = 1/799 (0%)
 Strand = Plus / Plus

                                                                        
Query: 90   tggatcgtgttgccttgaaattaaacggaaaatacttggccgcacctttattccaattct 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2928 tggatcgtgttgccttgaaattaaacggaaaatacttggccgcacctttattccaattct 2987

                                                                        
Query: 150  tacaacaaatgatcacatcttctgaatggagagagaggttcgcagcattgatggcgttat 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2988 tacaacaaatgatcacatcttctgaatggagagagaggttcgcagcattgatggcgttat 3047

                                                                        
Query: 210  catctgctgtt-attgttgccgtgatgtattaatgatcgagataaataagattttggaaa 268
            |||||||||   |  ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3048 catctgctgcagaaggttgccgtgatgtattaatgatcgagatagataagattttggaaa 3107

                                                                        
Query: 269  tggttgttccactgatcgatgatccacatccaagagttcaatacggttgctgtaatgtat 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3108 tggttgttccactgatcgatgatccacatccaagagttcaatacggttgctgtaatgtat 3167

                                                                        
Query: 329  tgggtcagatatccactgatttcactcctctcattcaaagcacttcgcatgaaaaaattt 388
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3168 tgggtcagatatccactgatttcgctcctctcattcaaagcacttcgcatgaaaaaattt 3227

                                                                        
Query: 389  tgcctgctttaatctctaagctcacttcaagctctgtcgacagagttcagacccatgcag 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3228 tgcctgctttaatctctaagctcacttcaagctctgtcgacagagttcagacccatgcag 3287

                                                                        
Query: 449  cggctgccttggtgaacttctccgaacaagctacgcaatcgattatggaaccttacttgg 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3288 cggctgccttggtgaacttctccgaacaagctacgcaatcgattatggaaccttacttgg 3347

                                                                        
Query: 509  atagtcttttaactaacttattaagcatgttgcaaagttccaagctgtacgttcaagaac 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3348 atagtcttttaactaacttattaagcatgttgcaaagttccaagctgtacgttcaagaac 3407

                                                                        
Query: 569  aggccttaactactatcgcatttatcgcagaagcagccgaaaagaaattcatcaaatact 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3408 aggccttaactactatcgcatttatcgcagaagcagccgaaaagaaattcatcaaatact 3467

                                                                        
Query: 629  atgatacattaatgccattattgataaacgtgttgagaaccgatacaggtactgaacgca 688
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 3468 atgatacattaatgccattattgataaacgtgttgagaaccgatacaggtactgaaagca 3527

                                                                        
Query: 689  cagtcttgaagggtacgcgtatggaattgtctactcttattgcattagctgngggcaaac 748
             |||||||||||||| | |||||||||  |||||||||||||||||||||| ||||||| 
Sbjct: 3528 gagtcttgaagggtaagtgtatggaatgttctactcttattgcattagctgtgggcaaag 3587

                                                                        
Query: 749  gaaagtttgccttctactctcaagaattgatccagttattcataacttatcaaaatgaag 808
             ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3588 aaaagtttgcctcctactctcaagaattgatccagttattcataacttatcaaaatgaag 3647

                                                                        
Query: 809  gtattcaggacgactatccctttaagacttaccttgaacaaatttggagtaaagtttgca 868
            |||||||||||||| ||||  | ||||||||||||||||||| |||||||| ||||||||
Sbjct: 3648 gtattcaggacgacgatcctctaaagacttaccttgaacaaagttggagtagagtttgca 3707

                               
Query: 869  ggattcttcgtgagaattt 887
            |||||||||||||| ||||
Sbjct: 3708 ggattcttcgtgaggattt 3726


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5850
Number of Sequences: 1807
Number of extensions: 5850
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 923
length of database: 10,358,551
effective HSP length: 16
effective length of query: 907
effective length of database: 10,329,639
effective search space: 9368982573
effective search space used: 9368982573
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)