BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC9ZG11FM1.SCF screened BAC_end
         (935 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1758                                                        1538   0.0  

>3x_Contig1758 
          Length = 25930

 Score = 1538 bits (776), Expect = 0.0
 Identities = 831/850 (97%)
 Strand = Plus / Minus

                                                                        
Query: 86   caagcatggattacgatgatgaggatgttcagactaacgaccggacttccacatctatca 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3619 caagcatggattacgatgatgaggatgttcagactaacgaccggacttccacatctatca 3560

                                                                        
Query: 146  ctgattcctatggtaaccgtgatgaaagtgattcgtacgatgacgacgataccgatgaca 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3559 ctgattcctatggtaaccgtgatgaaagtgattcgtacgatgacgacgataccgatgaca 3500

                                                                        
Query: 206  taaatccataagtgangacaagtagctctgaggaaagcacaaatagcgtgtctgacgagg 265
            |||||||| | |  | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3499 taaatccagatgatatgacaagtagctctgaggaaagcacaaatagcgtgtctgacgagg 3440

                                                                        
Query: 266  caagaccctcaggactttccaaaagttcaaattctcaaagctcagcacagttgggtcctt 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3439 caagaccctcaggactttccaaaagttcaaattctcaaagctcagcacagttgggtcctt 3380

                                                                        
Query: 326  cgaaacatgagccgactactcccgactacacgccaaaagaaaatgaacgagaaatggggg 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3379 cgaaacatgagccgactactcccgactacacgccaaaagaaaatgaacgagaaatggggg 3320

                                                                        
Query: 386  agaccattttgaacgcccctcttggtacagtgataaatatactctatggctcaaatgtcc 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3319 agaccattttgaacgcccctcttggtacagtgataaatatactctatggctcagatgtcc 3260

                                                                        
Query: 446  aatactttgatcgaatattaaaagctcaaggcaactatgatatctccaaatttaatgaaa 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3259 aatactttgatcgaatattaaaagctcaaggcaactatgatatctccaaatttaatgaaa 3200

                                                                        
Query: 506  taatccaatccaaaaaaagagaatacgtgtacactaaaccaatttccggtagtataggtc 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3199 taatccaatccaaaaaaagagaatacgtgtacactaaaccaatttccggtagtataggtc 3140

                                                                        
Query: 566  caagtaaaactcgctgtgagattactgaatcaatcgacaagttagatctcaaaaattacg 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3139 caagtaaaactcgctgtgagattactgaatcaatcgacaagttagatctcaaaaattacg 3080

                                                                        
Query: 626  tgcaggtcacacaagtctcgaaaactcccgatataccttcgggtaattccttcgctgata 685
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 3079 tgcaggtcacacaagtctcgaaaactcccgatataccttcgggtaattccttcgttgtta 3020

                                                                        
Query: 686  aaacaatattcttattctgttgggctgatgacaattcaaccatagtgaaagtgtatactt 745
            ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 3019 aaacaatattcttattctgttgggctgatgacaattcaaccaaggtgaaagtgtatactt 2960

                                                                        
Query: 746  acgtggactggtctgctaagagttggatcaaagcggctgttgaaaagggaacctttgacg 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2959 acgtggactggtctgctaagagttggatcaaagcggctgttgaaaagggaacctttgacg 2900

                                                                        
Query: 806  gaataaaatcttctacgaaaatatttttcgagaaacttgaagacatcatcgcagaagaca 865
            ||||||||||||||||||||||  |||||||| ||||||||||||||||||  ||| |||
Sbjct: 2899 gaataaaatcttctacgaaaattcttttcgaggaacttgaagacatcatcgaggaaaaca 2840

                                                                        
Query: 866  aaggtaagagcacctccccagattacagnaaggatattgaagaggttttatcttcactac 925
            |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 2839 aaggtaagagcagctccccagataacagaaaggatattgaagaggttttatcttcactac 2780

                      
Query: 926  catgtttggg 935
            ||||||||||
Sbjct: 2779 catgtttggg 2770


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6146
Number of Sequences: 1807
Number of extensions: 6146
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)