BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC9ZH01FM1.SCF screened BAC_end
         (933 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1755                                                        1542   0.0  

>3x_Contig1755 
          Length = 22936

 Score = 1542 bits (778), Expect = 0.0
 Identities = 838/849 (98%), Gaps = 7/849 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    atgctcaacaaaagccatgcagagttttactccagcatgtggatctaatcacaatgataa 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18561 atgctcaacaaaagccatgcagagttttactccagcatgtggatctaatcacaatgataa 18502

                                                                         
Query: 147   gcatttcgggcagagtcaaaatcgagttcagttacttattggtaaatggttactcactag 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18501 gcatttcgggcagagtcaaaatcgagttcagttacttattggtaaatggttactcactag 18442

                                                                         
Query: 207   attaaaggcagagaatgtcagtttcgaaaaggaagaagtagaggtatacgataatgccaa 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18441 attaaaggcagagaatgtcagtttcgaaaaggaagaagtagaggtatacgataatgccaa 18382

                                                                         
Query: 267   ctatagtatttggtactcgggagaggttaaaatactttcttctattttggattgtcaggg 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18381 ctatagtatttggtactcgggagaggttaaaatactttcttctattttggattgtcaggg 18322

                                                                         
Query: 327   ctttattctgatggttcttatctcagacttcatccagatccgaagaaatagactaagatc 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18321 ctttattctgatggttcttatctcagacttcatccagatccgaagaaatagactaagatc 18262

                                                                         
Query: 387   aaatgtggagatttcaggtaatctaattcttttagaaggttccatccaagatataagttt 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18261 aaatgtggagatttcaggtaatctaattcttttagaaggttccatccaagatataagttt 18202

                                                                         
Query: 447   ggatatatacatgctttcttcagtgaacaaggacttgtattccaacaataccaatgtttt 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18201 ggatatatacatgctttcttcagtgaacaaggacttgtattccaacaataccaatgtttt 18142

                                                                         
Query: 507   tgaaagttgcattcctggtaaaactgataatattttccagattgaaacagaagctgagaa 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18141 tgaaagttgcattcctggtaaaactgataatattttccagattgaaacagaagctgagaa 18082

                                                                         
Query: 567   tgtgactcccaccgaggaaagtttggtcttgagtcgtttgcaagtaagctacctcatagg 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18081 tgtgactcccaccgaggaaagtttggtcttgagtcgtttgcaagtaagctacctcatagg 18022

                                                                         
Query: 627   gcatgaaggtcagaggattgaatttctcagaagtgaagcaggtgtcaatataaagattat 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18021 gcatgaaggtcagaggattgaatttctcagaagtgaagcaggtgtcaatataaagattat 17962

                                                                         
Query: 687   gccaattgagaaaaggttaagcaatttcgatctcaaaaacccncgaaatacaactcaaga 746
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 17961 gccaattgagaaaaggttaagcaatttcgatctcaaaaacccccgaaatacaactcaaga 17902

                                                                         
Query: 747   agttagaatttacggtaaactacagaatgtacatcgatgtattgtttttgattgaacaac 806
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 17901 agttagaatttacggtaaactacagaatgtacatcgatgtattg-ttttgattgaacaac 17843

                                                                         
Query: 807   actttagaatgttttagtgtaccgcgccctaggaatatacaggttttttta-aaaacttt 865
             |||| |||||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||
Sbjct: 17842 acttaagaatg-tttagtgtaccgcgccctagggata-acaggtttttttagaaaacttt 17785

                                                                         
Query: 866   catcattcatggggcaaacaaaaaatggag-tgttaagtttattcctgcctgattttcac 924
             |||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||
Sbjct: 17784 catcattcatggggcaaacaaaaaatggagttgttaagttaatt-ctgcctga-tttcac 17727

                      
Query: 925   agcctgcag 933
             |||||||||
Sbjct: 17726 agcctgcag 17718


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7144
Number of Sequences: 1807
Number of extensions: 7144
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)