BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZH01FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1755 1542 0.0 >3x_Contig1755 Length = 22936 Score = 1542 bits (778), Expect = 0.0 Identities = 838/849 (98%), Gaps = 7/849 (0%) Strand = Plus / Minus Query: 87 atgctcaacaaaagccatgcagagttttactccagcatgtggatctaatcacaatgataa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18561 atgctcaacaaaagccatgcagagttttactccagcatgtggatctaatcacaatgataa 18502 Query: 147 gcatttcgggcagagtcaaaatcgagttcagttacttattggtaaatggttactcactag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18501 gcatttcgggcagagtcaaaatcgagttcagttacttattggtaaatggttactcactag 18442 Query: 207 attaaaggcagagaatgtcagtttcgaaaaggaagaagtagaggtatacgataatgccaa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18441 attaaaggcagagaatgtcagtttcgaaaaggaagaagtagaggtatacgataatgccaa 18382 Query: 267 ctatagtatttggtactcgggagaggttaaaatactttcttctattttggattgtcaggg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18381 ctatagtatttggtactcgggagaggttaaaatactttcttctattttggattgtcaggg 18322 Query: 327 ctttattctgatggttcttatctcagacttcatccagatccgaagaaatagactaagatc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18321 ctttattctgatggttcttatctcagacttcatccagatccgaagaaatagactaagatc 18262 Query: 387 aaatgtggagatttcaggtaatctaattcttttagaaggttccatccaagatataagttt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18261 aaatgtggagatttcaggtaatctaattcttttagaaggttccatccaagatataagttt 18202 Query: 447 ggatatatacatgctttcttcagtgaacaaggacttgtattccaacaataccaatgtttt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18201 ggatatatacatgctttcttcagtgaacaaggacttgtattccaacaataccaatgtttt 18142 Query: 507 tgaaagttgcattcctggtaaaactgataatattttccagattgaaacagaagctgagaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18141 tgaaagttgcattcctggtaaaactgataatattttccagattgaaacagaagctgagaa 18082 Query: 567 tgtgactcccaccgaggaaagtttggtcttgagtcgtttgcaagtaagctacctcatagg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18081 tgtgactcccaccgaggaaagtttggtcttgagtcgtttgcaagtaagctacctcatagg 18022 Query: 627 gcatgaaggtcagaggattgaatttctcagaagtgaagcaggtgtcaatataaagattat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18021 gcatgaaggtcagaggattgaatttctcagaagtgaagcaggtgtcaatataaagattat 17962 Query: 687 gccaattgagaaaaggttaagcaatttcgatctcaaaaacccncgaaatacaactcaaga 746 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 17961 gccaattgagaaaaggttaagcaatttcgatctcaaaaacccccgaaatacaactcaaga 17902 Query: 747 agttagaatttacggtaaactacagaatgtacatcgatgtattgtttttgattgaacaac 806 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 17901 agttagaatttacggtaaactacagaatgtacatcgatgtattg-ttttgattgaacaac 17843 Query: 807 actttagaatgttttagtgtaccgcgccctaggaatatacaggttttttta-aaaacttt 865 |||| |||||| ||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 17842 acttaagaatg-tttagtgtaccgcgccctagggata-acaggtttttttagaaaacttt 17785 Query: 866 catcattcatggggcaaacaaaaaatggag-tgttaagtttattcctgcctgattttcac 924 |||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||| Sbjct: 17784 catcattcatggggcaaacaaaaaatggagttgttaagttaatt-ctgcctga-tttcac 17727 Query: 925 agcctgcag 933 ||||||||| Sbjct: 17726 agcctgcag 17718 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7144 Number of Sequences: 1807 Number of extensions: 7144 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)