BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZH03RM1.SCF screened BAC_end (970 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1801 999 0.0 >3x_Contig1801 Length = 57606 Score = 999 bits (504), Expect = 0.0 Identities = 572/588 (97%), Gaps = 5/588 (0%) Strand = Plus / Minus Query: 53 cttcaccaagtatgccaactctcttatgggaaaatttgaatctttactgaagcaaattcc 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48056 cttcaccaagtatgccaactctcttatgggaaaatttgaatctttactgaagcaaattcc 47997 Query: 113 ggaatctccagaaatcaaacagcaattacacgaattacgtaccataattgctgatccacc 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47996 ggaatctccagaaatcaaacagcaattacacgaattacgtaccataattgctgatccacc 47937 Query: 173 aaagacaagtatcacatcccaatcgggtaatctacaagattctgatgatctatactccgc 232 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 47936 aaagacaagtatcacatcccaatcgggtaatctacaagattctgatgatctagactccgc 47877 Query: 233 caacaaaccaatatcgattgagtcaccgcagttatatcgttattggtcaggttaataata 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47876 caacaaaccaatatcgattgagtcaccgcagttatatcgttattggtcaggttaataata 47817 Query: 293 tagacaatattcatgtattatatagcctcgtaacattatattaatttaaactattgaaac 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47816 tagacaatattcatgtattatatagcctcgtaacattatattaatttaaactattgaaac 47757 Query: 353 aacacaaaaagtcaagcctctccttgtccaaatgcaacatcttcgttggagtaaatccta 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47756 aacacaaaaagtcaagcctctccttgtccaaatgcaacatcttcgttggagtaaatccta 47697 Query: 413 cttgttttttcctttgtaccttgtcttcaggaattatgtccgtatgctatattgtcttta 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47696 cttgttttttcctttgtaccttgtcttcaggaattatgtccgtatgctatattgtcttta 47637 Query: 473 aaatatgaaaatattgggaaccttcaaaaaaaatagcttttactaaacacgaattcgata 532 ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 47636 aaatatgaaaatattggaaaccttcaaaaaaaatagctttaactaaacacgaatacgata 47577 Query: 533 tttaatatttccaatatcaggacaattgaatgattctggtaatccgttgtaaaaaggcgg 592 ||||||||| |||||||||| ||||||||||||| ||||| || |||||| ||| | ||| Sbjct: 47576 tttaatattcccaatatcagaacaattgaatgatactggt-attcgttgt-aaaggtcgg 47519 Query: 593 atttgcatttattaaggaacccattaacaagttctggcgatgaatttg 640 ||||||| ||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 47518 atttgca-ttattaagg-acccagtaacaagttct-gcgatgaatttg 47474 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 17,968 Number of Sequences: 1807 Number of extensions: 17968 Number of successful extensions: 204 Number of sequences better than 1.0e-20: 1 length of query: 970 length of database: 10,358,551 effective HSP length: 16 effective length of query: 954 effective length of database: 10,329,639 effective search space: 9854475606 effective search space used: 9854475606 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)