BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZH04RM1.SCF screened BAC_end (985 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1612 262 1e-69 >3x_Contig1612 Length = 15608 Score = 262 bits (132), Expect = 1e-69 Identities = 183/194 (94%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 289 tcgtttggtttttccctttattctcanagcgataa-gtcttttcgattgactttgaacgg 347 ||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 15608 tcgtttggtttttcc-tttattctcaaagcgataaagtcttttcgattgactttgaacgg 15550 Query: 348 agganagaaagataga-gataagaagcacggaccaagtacaagctactagtatgagtgtc 406 |||| ||||||| || || |||||||||||||||||||||||||||||||||||||||| Sbjct: 15549 aggaaagaaagaaggaagaaaagaagcacggaccaagtacaagctactagtatgagtgtc 15490 Query: 407 gatgatgttgggtttctttctttgacccatttttgtgataagcatgggtccgaagtttct 466 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 15489 gatgatgttgggtttctttctttgacccatttttgtgataagcat-ggtccgaagtttct 15431 Query: 467 -atgtttacgcaaa 479 ||| ||||||||| Sbjct: 15430 aatggttacgcaaa 15417 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8534 Number of Sequences: 1807 Number of extensions: 8534 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 985 length of database: 10,358,551 effective HSP length: 16 effective length of query: 969 effective length of database: 10,329,639 effective search space: 10009420191 effective search space used: 10009420191 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)