BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC9ZH06FM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1631 1380 0.0 >3x_Contig1631 Length = 12284 Score = 1380 bits (696), Expect = 0.0 Identities = 743/755 (98%), Gaps = 3/755 (0%) Strand = Plus / Plus Query: 88 tatcagttttgctatactatgcaacccgcctggcaccaacaatttccattatcattattc 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5293 tatcagttttgctatactatgcaacccgcctggcaccaacaatttccattatcattattc 5352 Query: 148 ttaatagagaactctttttttctttttcttgaaatcctgtgaagaaaaaaatactgaaaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5353 ttaatagagaactctttttttctttttcttgaaatcctgtgaagaaaaaaatactgaaaa 5412 Query: 208 gaattgttttttttatgagatgagatgagatgaaatgagactgaaagtatttgatagcaa 267 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5413 gaattgttaaagcgatgagatgagatgagatgaaatgagactgaaagtatttgatagcaa 5472 Query: 268 aaagattcattgtgaactgtccccatttggcagagcacacttttcattatcataatataa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5473 aaagattcattgtgaactgtccccatttggcagagcacacttttcattatcataatataa 5532 Query: 328 atacattattcagtaatttcaagatgggtttggcagcagcaaggaataaacaaaggtttg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5533 atacattattcagtaatttcaagatgggtttggcagcagcaaggaataaacaaaggtttg 5592 Query: 388 gattggatccaagaaacacaacttggagtaacaatacatcaagatttggacacaaacatc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5593 gattggatccaagaaacacaacttggagtaacaatacatcaagatttggacacaaacatc 5652 Query: 448 tagagaaactaggatggaaacctggttccggtttgggattagttccagattctacaacat 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5653 tagagaaactaggatggaaacctggttccggtttgggattagttccagattctacaacat 5712 Query: 508 cacatatcaaggtttctatcaaagatgacaatcttgggttgggagcgaaactcaaaaaga 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5713 cacatatcaaggtttctatcaaagatgacaatcttgggttgggagcgaaactcaaaaaga 5772 Query: 568 aagagaagcaagatgaatttgatagtggtgaatgtacgggattggacgtcttccaaagat 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5773 aagagaagcaagatgaatttgatagtggtgaatgtacgggattggacgtcttccaaagat 5832 Query: 628 tacttggaagattaaatggtaatgagcagacaatttcagatgaattggataagcaaagaa 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5833 tacttggaagattaaatggtaatgagcagacaatttcagatgaattggataagcaaagaa 5892 Query: 688 ccgacaatattataaacgggaaatgggggatacactntgtgaagggagaagtccttgcaa 747 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5893 ccgacaatattataaacgggaaatgggggatacactttgtgaagggagaagtccttgcaa 5952 Query: 748 gtacatgggatgctgaaaataagc-actcatgag-tatagtatgggtaagaagagacc-g 804 |||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| | Sbjct: 5953 gtacatgggatgctgaaaataagcaactcataagttatagtatgggtaagaagagaccgg 6012 Query: 805 tagagggatcgtctgatagtgaggctagcgatcgg 839 |||||||||||||||||||||||| |||||||||| Sbjct: 6013 tagagggatcgtctgatagtgaggttagcgatcgg 6047 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9609 Number of Sequences: 1807 Number of extensions: 9609 Number of successful extensions: 469 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)