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Thermococcus gammatolerans EJ3
>tg1925 DNA-directed RNA polymerase subunit A′ (rpoA1)
MQSMKKVIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGVIDPGLRCETCGARAGECPGHFGHIELA
RPVVHVGFAKTIQRVLESTCRECGRIKLTDEEIEEYMKKFEVIGDRKKDKDRLIKEIHKKAKERMVCPHCGAPQFPIKFE
RPTIYYELRRDEEGNEYKHRMMPSEIRDRLERIPDKDLPLLGLHPEKSRPEWMILTVLPVPPVTMRPSITLESGIRAEDD
LTHKLVDIIRINNRLKSNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGIPPAKHKSGRPLKTLAQRLKGKEGRFRGNLS
GKRVNFSARTVISPDPMISINEVGVPLAIAMELTVPEKVTEFNFEKLKQRVLNGPEKYPGANYVIDPEGRRIRLMENNLE
TIAERLDIGWTVERHLEDGDIVLFNRQPSLHRMSIMAHRVRVMPYKTFRLNLPVCPPYNADFDGDEMNLHVPQTEEAQAE
AKILMEVQNHIISPRYGGPLIAGIQDHISGGYLLTREGAYFTRSEVEQMLTFAGVDVDELPKPDKVENGVELWSGKTIFS
LLLPDDLTLWYRNKLCDEPERCEAIEKLIEEKLVPDPEEVRKIAYDGFVYIQNGKLLSGAIDKKAYGREDGKLLDIIVRE
YGVERARQFLDQVTKLTIWVITHKGFTTAIDDEDLPQEALDRIKEIIREAEERVNKLIEAYKRGELEPLPGKTLEETLES
KIMAVLAEARDNAGKVAERYLGMNNHAVIMAKTGARGKILNITQMAAMLGQQSIRGKRLYRGYRGRVLTHFKPGDLGARA
RGFVVNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGYMQRRLINALQDLKVDYDGTVRDPTGIIVQFRYGEDGVDPM
RSWQGRTLDVERIIVRNLLKSRGGR

Supplementary options
Additional orf sequence data See Genomic Environment
Search GenBank with PSI-Blast at NCBI Search Complete Genomes DataBase with Blast at LBMGE
Search InterPro Database at LBMGE Search CDD Database at LBMGE
Determine COG functional Category (microbial) Determine COG functional Category (eukarial)
__________ GenBank id: 239911536 Gene name: rpoA1 COG: K COG0086 DNA-directed RNA polymerase, beta’ subunit/160 kD subunit Taxon: 593117 Lineage: Archaea: Euryarchaeota: Thermococci: Thermococcales: Thermococcaceae: Thermococcus: Thermococcus gammatolerans: Thermococcus gammatolerans EJ3
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