BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0018 (ubiA-like) DE:4-hydroxybenzoate octaprenyltransferase,
putative
(336 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B75188 probable 4-hydroxybenzoate octaprenyltransferase PAB... 659 0.0
pir||H71220 hypothetical protein PH0027 - Pyrococcus horikoshii ... 447 e-124
sp|Q57727|Y279_METJA HYPOTHETICAL PROTEIN MJ0279 >gi|2127718|pir... 169 3e-41
pir||H69012 conserved hypothetical protein MTH1098 - Methanobact... 162 4e-39
gb|AAG19118.1| (AE005009) 4-hydroxybenzoate octaprenyltransferas... 159 4e-38
gb|AAK40896.1| 4-hydroxybenzoate octaprenyltransferase , putativ... 143 3e-33
emb|CAB57717.1| (Y18930) hypothetical protein [Sulfolobus solfat... 143 3e-33
gi|11498016 4-hydroxybenzoate octaprenyltransferase, putative [A... 126 3e-28
pir||D72771 probable bacteriochlorophyll synthase APE0159 - Aero... 125 7e-28
emb|CAC12125.1| (AL445066) conserved hypothetical protein [Therm... 125 7e-28
pir||S01072 hypothetical protein 1 (23S rRNA 3' region) - Desulf... 78 1e-13
pir||T50911 geranylgeranyl bacteriochlorophyll synthase [importe... 78 1e-13
pir||T50737 bacteriochlorophyll a synthase (EC 6.1.-.-) bchG [im... 74 3e-12
sp|P26170|BCHG_RHOCA BACTERIOCHLOROPHYLL SYNTHASE 33 KD CHAIN >g... 73 6e-12
pir||S74363 chlorophyll synthase chain 33K - Synechocystis sp. (... 70 3e-11
pir||S60222 probable chlorophyll synthetase G4 [imported] - Arab... 69 7e-11
sp|P33326|BCHG_CHLAU BACTERIOCHLOROPHYLL SYNTHASE 34 KD CHAIN >g... 69 9e-11
emb|CAB85464.1| (AJ277210) chlorophyll synthase [Avena sativa] 69 9e-11
>pir||B75188 probable 4-hydroxybenzoate octaprenyltransferase PAB0018 -
Pyrococcus abyssi (strain Orsay)
>gi|5457462|emb|CAB48953.1| (AJ248283) 4-hydroxybenzoate
octaprenyltransferase, putative [Pyrococcus abyssi]
Length = 336
Score = 659 bits (1683), Expect = 0.0
Identities = 336/336 (100%), Positives = 336/336 (100%)
Query: 1 MACSLGVISLPHDVHTGISNFSSTFSANSHTSRREVFLNCHRVEAGIYKPFPKIVLGKKV 60
MACSLGVISLPHDVHTGISNFSSTFSANSHTSRREVFLNCHRVEAGIYKPFPKIVLGKKV
Sbjct: 1 MACSLGVISLPHDVHTGISNFSSTFSANSHTSRREVFLNCHRVEAGIYKPFPKIVLGKKV 60
Query: 61 EVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYFD 120
EVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYFD
Sbjct: 61 EVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYFD 120
Query: 121 VEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIYA 180
VEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIYA
Sbjct: 121 VEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIYA 180
Query: 181 WKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSREIMKDIEDIEG 240
WKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSREIMKDIEDIEG
Sbjct: 181 WKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSREIMKDIEDIEG 240
Query: 241 DMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGIGLGYAPIILVDAMILKASI 300
DMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGIGLGYAPIILVDAMILKASI
Sbjct: 241 DMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGIGLGYAPIILVDAMILKASI 300
Query: 301 DVVKNPESASKGQKTLKIATFIAVISFLLGALTKGV 336
DVVKNPESASKGQKTLKIATFIAVISFLLGALTKGV
Sbjct: 301 DVVKNPESASKGQKTLKIATFIAVISFLLGALTKGV 336
>pir||H71220 hypothetical protein PH0027 - Pyrococcus horikoshii
>gi|3256412|dbj|BAA29095.1| (AP000001) 277aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 277
Score = 447 bits (1137), Expect = e-124
Identities = 218/277 (78%), Positives = 246/277 (88%)
Query: 60 VEVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYF 119
+E KAF+EIMRPHNCILAG+VGILGSLVAYEGIP ++KL L+FLVVY GCSAGNTINDYF
Sbjct: 1 MEPKAFVEIMRPHNCILAGIVGILGSLVAYEGIPPVQKLILIFLVVYFGCSAGNTINDYF 60
Query: 120 DVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIY 179
DVEID++NRPNRPIPRGAI RK A YY +LQY +GL +A LG A LFALGAY LTF+Y
Sbjct: 61 DVEIDKINRPNRPIPRGAITRKAAFYYGVLQYFIGLIIALLLGWSAFLFALGAYFLTFVY 120
Query: 180 AWKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSREIMKDIEDIE 239
AWKLKPLPFIGNV VALLTAATPIYGA+GVGR+ LAGYLAICAFLVNVSREIMKDIED E
Sbjct: 121 AWKLKPLPFIGNVTVALLTAATPIYGAVGVGRIDLAGYLAICAFLVNVSREIMKDIEDFE 180
Query: 240 GDMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGIGLGYAPIILVDAMILKAS 299
GD ++GA+TLPI+IGK+++ +I+SIFG LT+I+SFLPVKVGIGLGY PII+VD MI KAS
Sbjct: 181 GDKRLGARTLPIMIGKKKSGIIASIFGFLTIISSFLPVKVGIGLGYLPIIIVDIMIAKAS 240
Query: 300 IDVVKNPESASKGQKTLKIATFIAVISFLLGALTKGV 336
IDV+ NPE A KGQK LK ATFIAVISFLLGALT+ V
Sbjct: 241 IDVLVNPEKAGKGQKILKFATFIAVISFLLGALTREV 277
>sp|Q57727|Y279_METJA HYPOTHETICAL PROTEIN MJ0279 >gi|2127718|pir||H64334 conserved
hypothetical protein MJ0279 - Methanococcus jannaschii
>gi|1591005|gb|AAB98267.1| (U67483) 4-hydroxybenzoate
octaprenyltransferase (ubiA) [Methanococcus jannaschii]
Length = 283
Score = 169 bits (425), Expect = 3e-41
Identities = 104/276 (37%), Positives = 161/276 (57%), Gaps = 5/276 (1%)
Query: 61 EVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYFD 120
++K ++E++R NCI A + GI+G L++ I K LVF VV+ C+ GN IND FD
Sbjct: 7 KLKTYLELIRVKNCITASIGGIIGYLISSNFEIDILKSLLVFFVVFFVCAYGNVINDIFD 66
Query: 121 VEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIYA 180
+EIDR+N+P+RP+P G I A ++ + +LGL L+ F+ + AL+ A+ ++YA
Sbjct: 67 IEIDRINKPSRPLPSGKIKLNEAKKFSAILLILGLVLSLFINIYALIIAVINALFLYLYA 126
Query: 181 WKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSREIMKDIEDIEG 240
K K IGN + LT + ++G + V L +C+ L REI+KD ED+EG
Sbjct: 127 KKYKKYKPIGNFIIGYLTGSVFLFGGVAGKNVMPVVILFLCSLLSIWGREIVKDFEDMEG 186
Query: 241 DMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGI-GLGYAPIILV-DAMILKA 298
D K G +LPI GK ++ ++ VL VI S LP + I G+ Y +I + D + + A
Sbjct: 187 DKKEGVISLPIKYGK-KSLYFATFLVVLAVILSPLPYILKIFGIWYLILIAICDILFIYA 245
Query: 299 SIDVVKNP--ESASKGQKTLKIATFIAVISFLLGAL 332
++K P E+ASK K LKI I +++F++GA+
Sbjct: 246 MALLLKEPNKETASKVSKFLKIIMNIVLLAFIVGAI 281
>pir||H69012 conserved hypothetical protein MTH1098 - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622199|gb|AAB85587.1| (AE000880)
bacteriochlorophyll synthase related protein
[Methanobacterium thermoautotrophicum]
Length = 281
Score = 162 bits (407), Expect = 4e-39
Identities = 96/273 (35%), Positives = 161/273 (58%), Gaps = 7/273 (2%)
Query: 65 FIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYFDVEID 124
+IEI+RP N ++A + +L +L+ S+ L +VV+ AGN INDYFD EID
Sbjct: 4 YIEILRPVNAVMAVITVMLMALITGRFDFSVL---LASVVVFTATGAGNVINDYFDHEID 60
Query: 125 RVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIYAWKLK 184
+NRP RPIP G I R VA Y+++ + L + +LG+ L + + L YAW+LK
Sbjct: 61 AINRPERPIPSGRISRGVAGVYSIILFALASLMGFYLGLLPGLVVVSSSLLMVYYAWRLK 120
Query: 185 PLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSREIMKDIEDIEGDMKM 244
+GN+ ++ LT + ++G + +G V + L AFL+ ++REI+KD+ED+EGD
Sbjct: 121 KRCLVGNITISFLTGLSFVFGGIVLGEVRASILLGFYAFLMTMAREIVKDMEDVEGDRAE 180
Query: 245 GAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGI-GLGYAPIILVD-AMILKASIDV 302
GA TLPI G R + ++++ F ++ +TS +GI Y P++L+ A+ L+A+I +
Sbjct: 181 GATTLPITHGMRISGVLAASFMLIASLTSPSLYLLGIFSALYIPVLLLAVAVFLRAAIMI 240
Query: 303 VKNPE--SASKGQKTLKIATFIAVISFLLGALT 333
++ + +AS+ + +K+ + I+F G+ T
Sbjct: 241 LRGQDRATASRVSRMIKVGMALTFIAFAAGSGT 273
>gb|AAG19118.1| (AE005009) 4-hydroxybenzoate octaprenyltransferase; HhoA
[Halobacterium sp. NRC-1]
Length = 280
Score = 159 bits (398), Expect = 4e-38
Identities = 95/278 (34%), Positives = 149/278 (53%), Gaps = 2/278 (0%)
Query: 56 LGKKVEV-KAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNT 114
+G VE + +E+ RP N + AG + +G+ VA + G +L + GN
Sbjct: 1 MGTGVETGRGLVELARPVNTLAAGALTFIGAFVAGGAVGRPAATGAAVGATWLATAGGNA 60
Query: 115 INDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYA 174
INDYFD E+DR+N P+R IPRGA+ + AL Y+++ ++ ALA L V A+ A A
Sbjct: 61 INDYFDREVDRINDPDRAIPRGAVSPRGALAYSVVLFVGAAALAATLPVLAVCIAALNLA 120
Query: 175 LTFIYAWKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSREIMKD 234
Y LK P GN VA L +T ++GA VG G LA A L +RE++KD
Sbjct: 121 GLLTYTQYLKGRPGAGNALVAYLGGSTFVFGAAAVGSPLAGGVLAALAALSTFAREVIKD 180
Query: 235 IEDIEGDMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGIGLGYAPIILVDAM 294
+ED+ GD G +TLP+++G +RA +S++F V S +P VG+ G+ ++ V
Sbjct: 181 VEDLAGDRAAGLRTLPVVVGHQRALAVSAVFVVGAAAASPVPYLVGV-FGWWYLVAVCPG 239
Query: 295 ILKASIDVVKNPESASKGQKTLKIATFIAVISFLLGAL 332
++ + ++ + GQ+ LK +A +F++G L
Sbjct: 240 VVVMVVAAARSYTDPAAGQRLLKRGQLLAAAAFVVGRL 277
>gb|AAK40896.1| 4-hydroxybenzoate octaprenyltransferase , putative (ubiA-2)
[Sulfolobus solfataricus]
Length = 282
Score = 143 bits (357), Expect = 3e-33
Identities = 98/278 (35%), Positives = 150/278 (53%), Gaps = 6/278 (2%)
Query: 60 VEVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYF 119
+ +K++++++R HN I A + I+G LV+ + ++ + L LVV L + G IND +
Sbjct: 1 MSLKSYMQLVRIHNVIGAALGAIMGFLVSSQWYLELKGILLSALVVGLIAAGGYVINDVY 60
Query: 120 DVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIY 179
DVEID++N+P RPIP G I A ++ +++G+AL+ L + AL+ AL Y
Sbjct: 61 DVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALVTAIGLIYY 120
Query: 180 AWKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAI---CAFLVNVSREIMKDIE 236
A LK F GN+ VA TA + YG L + I AF + + REI+K IE
Sbjct: 121 AKDLKKTGFYGNLLVATTTALSIFYGGLAFFSDNWLLRIIIPTLYAFFLTLIREIVKGIE 180
Query: 237 DIEGDMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGIGLGYAPIILVDAMIL 296
D GD KTL +G ++ I+ I VL +I S LP +G L Y I+L+ I
Sbjct: 181 DYNGDSLNNVKTLATTLGINKSWRIAKILLVLLLIISPLPFFIGFNLIYL-ILLILVFIP 239
Query: 297 KASIDVVKNP--ESASKGQKTLKIATFIAVISFLLGAL 332
+ +++ E ASK + LKI+ +I+FLLG+L
Sbjct: 240 FTILSIIQKETIEGASKARTYLKISAISGIIAFLLGSL 277
>emb|CAB57717.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
Length = 282
Score = 143 bits (357), Expect = 3e-33
Identities = 98/278 (35%), Positives = 150/278 (53%), Gaps = 6/278 (2%)
Query: 60 VEVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYF 119
+ +K++++++R HN I A + I+G LV+ + ++ + L LVV L + G IND +
Sbjct: 1 MSLKSYMQLVRIHNVIGAALGAIMGFLVSSQWYLELKGILLSALVVGLIAAGGYVINDVY 60
Query: 120 DVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIY 179
DVEID++N+P RPIP G I A ++ +++G+AL+ L + AL+ AL Y
Sbjct: 61 DVEIDKINKPYRPIPSGKISVNKAKALSIALFIIGIALSILLNIYALVIALVTAIGLIYY 120
Query: 180 AWKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAI---CAFLVNVSREIMKDIE 236
A LK F GN+ VA TA + YG L + I AF + + REI+K IE
Sbjct: 121 AKDLKKTGFYGNLLVATTTALSIFYGGLAFFSDNWLLRIIIPTLYAFFLTLIREIVKGIE 180
Query: 237 DIEGDMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGIGLGYAPIILVDAMIL 296
D GD KTL +G ++ I+ I VL +I S LP +G L Y I+L+ I
Sbjct: 181 DYNGDSLNNVKTLATTLGINKSWRIAKILLVLLLIISPLPFFIGFNLIYL-ILLILVFIP 239
Query: 297 KASIDVVKNP--ESASKGQKTLKIATFIAVISFLLGAL 332
+ +++ E ASK + LKI+ +I+FLLG+L
Sbjct: 240 FTILSIIQKETIEGASKARTYLKISAISGIIAFLLGSL 277
>gi|11498016 4-hydroxybenzoate octaprenyltransferase, putative [Archaeoglobus
fulgidus] >gi|7430124|pir||D69300 4-hydroxybenzoate
octaprenyltransferase homolog - Archaeoglobus fulgidus
>gi|2650221|gb|AAB90826.1| (AE001076) 4-hydroxybenzoate
octaprenyltransferase, putative [Archaeoglobus fulgidus]
Length = 293
Score = 126 bits (314), Expect = 3e-28
Identities = 90/280 (32%), Positives = 148/280 (52%), Gaps = 10/280 (3%)
Query: 62 VKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLGCSAGNTINDYFDV 121
+KA +++R + ++ G ++G V+ + KL L +L ++ +NDYFD
Sbjct: 13 LKAIWDLLRLEHGLMYGFGVVIGIYVSDPFFSDLWKLLLGYLTAVFLQASTFALNDYFDY 72
Query: 122 EIDRVN-RPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIYA 180
E+D VN R +RP+ RG + R++AL A+ G A + A +FA L +Y
Sbjct: 73 EVDLVNNRTDRPLVRGDLSRRIALALAIALMPPGFVAAYLISPLAFIFAFAVSVLACLYD 132
Query: 181 WKLKPLPFIGNVAVALLTAATPIYGA-LGVGRV-GLAGYLAICAFLVNVSREIMKDIEDI 238
+KLK L F GNV +A AA ++G+ + G + LA AFL V REIMK IED+
Sbjct: 133 YKLKELGFAGNVYIAFTMAAPFLFGSIISSGWITEKTALLASMAFLTGVGREIMKGIEDV 192
Query: 239 EGDMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPV----KVGIGLGYA-PIILVDA 293
EGD ++L +G+R+AA I+S+F + V S +P+ + L YA P+ + D
Sbjct: 193 EGDALRDVRSLARTMGERKAASIASLFYLTAVSISPIPLFLLPEFLFDLKYAVPVSVTDV 252
Query: 294 MILKASIDVVKN--PESASKGQKTLKIATFIAVISFLLGA 331
+++ ++ +V + ES K +K +A + ++ F GA
Sbjct: 253 LLIYVALRLVGDYERESIRKYRKVTLVAMVLGLVGFFAGA 292
>pir||D72771 probable bacteriochlorophyll synthase APE0159 - Aeropyrum pernix
(strain K1) >gi|5103549|dbj|BAA79070.1| (AP000058) 282aa
long hypothetical bacteriochlorophyll synthase
[Aeropyrum pernix]
Length = 282
Score = 125 bits (311), Expect = 7e-28
Identities = 87/283 (30%), Positives = 145/283 (50%), Gaps = 15/283 (5%)
Query: 62 VKAFIEIMRPHNCILAGVVGILGSLVA----YEGIPSIEKLGLVFLVVYLGCSAGNTIND 117
+KA IEI RP N ++ + IL +A ++G I+ + +V + Y S ND
Sbjct: 1 MKAAIEITRPVNSLMVSLAIILSLGIASRWSFQGFTPIDLMAVV-VAGYCLSSVAMITND 59
Query: 118 YFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTF 177
D+EIDR+N P+RP+P G + A ++ LG A + + F LG AL+
Sbjct: 60 IIDLEIDRINAPHRPLPAGKVSTVEATILSIFLAALGFLAAISVDLITTAFYLGGLALSL 119
Query: 178 IYAWKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAI---CAFLVNVSREIMKD 234
+Y LK GN+ VA L +A +Y +L G GL G +++ FL + RE+ K
Sbjct: 120 LYNTLLKRTGLPGNIVVAALVSAPFMYASLEAG--GLGGPMSVFSTMVFLAVLGREVAKG 177
Query: 235 IEDIEGDMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGI--GLGYAP-IILV 291
+ D+EGD G +T+ ++ GK+ AA ++S + + ++P+ G L Y P I+L+
Sbjct: 178 VPDVEGDKAAGVRTVAVVFGKKTAAAVASALYLASAALGYIPLIYGYVDPLIYTPFILLL 237
Query: 292 DAMILKASIDVVKNP--ESASKGQKTLKIATFIAVISFLLGAL 332
++L+ ++ +VK P E+ + + I +I+F LG L
Sbjct: 238 TLLVLREALLIVKRPTRENVLAHKNRVLGYMLIGLIAFALGTL 280
>emb|CAC12125.1| (AL445066) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 256
Score = 125 bits (311), Expect = 7e-28
Identities = 77/232 (33%), Positives = 121/232 (51%), Gaps = 7/232 (3%)
Query: 103 LVVYLGCSAGNTINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLG 162
+ V+L S GN IND DVE+DR+N P RP+ G + +K A + + + + ++ F+
Sbjct: 30 IAVFLVTSGGNIINDIVDVEVDRINHPRRPLVTGELSKKTAQAMFITFFAVAIVISVFIS 89
Query: 163 VEALLFALGAYALTFIYAWKLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICA 222
+ A+L + A L Y + LK GN ++LL I+G + V G +L + A
Sbjct: 90 IIAMLIVILAEVLLVSYEYALKKTGLPGNAVISLLIGLIFIFGGVSVFSYGKMVFLFLLA 149
Query: 223 FLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMISSIFGVLTVITSFLPVKVGIG 282
F N+SREI+KD+ED+ GD T P G R A ++S L V+ S++P + I
Sbjct: 150 FTSNMSREIIKDVEDVNGD--SDRITFPKKYGVRNAIILSDAIIGLLVVISYIPFAMHIL 207
Query: 283 LGY--APIILVDAMILKASIDVVKNPESASKGQKTLKIATFIAVISFLLGAL 332
+ +++ DA+ + + +NP S GQK K A + + SFL GAL
Sbjct: 208 SRFYLYVVVVADALFIVSGAISSRNPTS---GQKVSKYAMIVGMASFLAGAL 256
>pir||S01072 hypothetical protein 1 (23S rRNA 3' region) - Desulfurococcus
mobilis >gi|40811|emb|CAA29551.1| (X06190) ORF 1 (AA 1 -
283) [Desulfurococcus mobilis]
Length = 283
Score = 78.4 bits (190), Expect = 1e-13
Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 22/279 (7%)
Query: 65 FIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLV-----FLVVYLGCSAGNTINDYF 119
+ +MR N +++GV + SL+ ++ LG+V F + +A +ND
Sbjct: 6 YFSMMRIPNSLMSGVGAVFMSLMFSNYC--VDCLGVVRLAAGFATGFTVTAASMLVNDVV 63
Query: 120 DVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFALGAYALTFIY 179
D+ +DRVN+P +P+P G +VAL ++ ++ LA+ + L + AL Y
Sbjct: 64 DLGVDRVNKPWKPLPSGRASPRVALALSIFLPLIALAVNLSVDKGLALVTVVYSALGLGY 123
Query: 180 AWKLKPLPFIGNVAVALLTAATPIYGALGVGR----VGLAGYLAICAFLVNVSREIMKDI 235
++ K + + VA T YG + G + +A L+I F+V + RE++K +
Sbjct: 124 SFLRKH--WWSQLIVAASTTGPIAYGYVAAGSPSSSIHVALGLSITIFVVTLGREVLKAM 181
Query: 236 EDIEGDMKMGAKTLPIIIGKRRAA---MISSIFGVLTVITSFLPVKVGIGLGYAPIILV- 291
+D+EGD G T+P+ +G +A + + I G IT+ V G G+ Y +I V
Sbjct: 182 QDVEGDRLHGYSTIPLKLGVEESAKLLVFAGIAGPAAGITT--GVIAGSGIVYKAVISVA 239
Query: 292 DAMILKASIDVVKNPESAS---KGQKTLKIATFIAVISF 327
+ L + + + P + + +K + + +++F
Sbjct: 240 GGLYLYSMVKAYRKPREKNVLEEARKETLLEMMLGLVAF 278
>pir||T50911 geranylgeranyl bacteriochlorophyll synthase [imported] - Rubrivivax
gelatinosus >gi|7416815|dbj|BAA94064.1| (AB034704)
geranylgeranyl bacteriochlorophyll synthase [Rubrivivax
gelatinosus]
Length = 294
Score = 78.4 bits (190), Expect = 1e-13
Identities = 66/191 (34%), Positives = 86/191 (44%), Gaps = 24/191 (12%)
Query: 87 VAYEGIPSIEKLGLVFLVVYLG----CSAGNTINDYFDVEIDRVNRPNRPIPRGAIPRKV 142
V G P LVFL V L C+ +ND+FD +D +N PNRPIP G IP +
Sbjct: 29 VVASGQPITANWFLVFLGVLLAGPLVCATSQAVNDWFDRHVDAINEPNRPIPSGRIPGRW 88
Query: 143 ALYYALLQYMLGLALARFLGVEALLFALGAYALTFIYAW-------KLKPLPFIGNVA-- 193
LY A+ L L +A LG + GA L I AW +LK + GN A
Sbjct: 89 GLYIAIGWTALSLLVATQLGP----WGFGAAVLGLILAWAYSAPPVRLKQNGWWGNAACG 144
Query: 194 -----VALLTAATPIYGALGVGRVGLAGYLAICAFLVNVSREIMKDIEDIEGDMKMGAKT 248
+A +T A + G LA LA+ L + D + IEGD KMG +
Sbjct: 145 ISYEGLAWVTGAAVMAGGAMPASHSLA--LALLYSLGAHGIMTLNDFKAIEGDKKMGVGS 202
Query: 249 LPIIIGKRRAA 259
LP+ +G AA
Sbjct: 203 LPVRLGVDGAA 213
>pir||T50737 bacteriochlorophyll a synthase (EC 6.1.-.-) bchG [imported] -
Rhodobacter sphaeroides >gi|4490581|emb|CAB38731.1|
(AJ010302) geranylgeranyl bacteriochlorophyll synthase
[Rhodobacter sphaeroides] >gi|6690713|gb|AAF24281.1|
(AF195122) BchG [Rhodobacter sphaeroides]
Length = 302
Score = 73.7 bits (178), Expect = 3e-12
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 33/223 (14%)
Query: 61 EVKAFIEIMRPHN------CILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLG----CS 110
E +A +E+++P L G V + GI EK LV L + L C
Sbjct: 14 EPRALLELIQPITWFPPIWAYLCGTVSV--------GIWPGEKWPLVLLGMVLAGPLVCG 65
Query: 111 AGNTINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEALLFAL 170
N++ D +D VN P+RPIP G IP + LY ALL +L LA+ LG +
Sbjct: 66 MSQAANNWCDRHVDAVNEPDRPIPSGRIPGRWGLYIALLMTVLSLAVGWMLGP----WGF 121
Query: 171 GAYALTFIYAW-------KLKPLPFIGNVAVALLTAATPIYGALGVGRVGLAGYLAICAF 223
GA + AW +LK + G VAL P + V G + +
Sbjct: 122 GATVFGVLAAWAYSVEPIRLKRSGWWGPGLVALCYEGLPWFTGAAVLSAGAPSFFIVTVA 181
Query: 224 LVNV--SREIM--KDIEDIEGDMKMGAKTLPIIIGKRRAAMIS 262
L+ + IM D + +EGD + G ++LP+++G AA ++
Sbjct: 182 LLYAFGAHGIMTLNDFKALEGDRQHGVRSLPVMLGPEVAAKLA 224
>sp|P26170|BCHG_RHOCA BACTERIOCHLOROPHYLL SYNTHASE 33 KD CHAIN >gi|79447|pir||S17816
bacteriochlorophyll synthase 33K chain - Rhodobacter
capsulatus >gi|46115|emb|CAA77532.1| (Z11165) 304 aa
(33kD) bacteriochlorophyll synthase subunit [Rhodobacter
capsulatus]
Length = 304
Score = 72.6 bits (175), Expect = 6e-12
Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 61 EVKAFIEIMRPHNCILAGVVGILGSLVAYEGIPSIEKLGLVFLVVYLG----CSAGNTIN 116
E +A +E+++P + G++ + +P E G+V L + L C N
Sbjct: 15 EPRAMLELIKPVTWFPPMWAYLCGAVSS--NVPIWENKGVVVLGIVLAGPIVCGMSQAAN 72
Query: 117 DYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLG----VEALLFALGA 172
D+ D +D +N P+RPIP G IP LY A+ +L L + LG V LL A
Sbjct: 73 DWCDRHVDAINEPHRPIPSGRIPGLWGLYIAIAMSLLSLVVGWQLGSWGFVATLLGVAAA 132
Query: 173 YALTF--------------IYAWKLKPLPFIGNVAVALLTAAT----PIYGALGVGRVGL 214
+A + + + LP+I AV L TA T PI + +G
Sbjct: 133 WAYSVEPIRLKRSGWWGPGLVGLAYEGLPWITGAAVLLATADTSPGFPIVMMATLYALGA 192
Query: 215 AGYLAICAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMIS 262
G + I D + IEGD K+G K+LP + G AA I+
Sbjct: 193 HGIMTI------------NDFKAIEGDRKLGIKSLPAVYGPEVAAKIA 228
>pir||S74363 chlorophyll synthase chain 33K - Synechocystis sp. (strain PCC
6803) >gi|1001139|dbj|BAA10281.1| (D64001) chlorophyll
synthase 33 kD subunit [Synechocystis sp.]
Length = 324
Score = 70.2 bits (169), Expect = 3e-11
Identities = 50/167 (29%), Positives = 82/167 (48%), Gaps = 20/167 (11%)
Query: 114 TINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEA-------L 166
T+ND++D +ID +N P RPIP GAI + L+ + G+ +A L V A +
Sbjct: 87 TLNDFYDRDIDAINEPYRPIPSGAISVPQVVTQILILLVAGIGVAYGLDVWAQHDFPIMM 146
Query: 167 LFALGAYALTFIYA---WKLKPLPFIGNVAVALLTAATP------IYGALGVGRVGLAGY 217
+ LG + +IY+ KLK ++GN A+ A P ++G L +
Sbjct: 147 VLTLGGAFVAYIYSAPPLKLKQNGWLGNYALGASYIALPWWAGHALFGTLNPTIM----V 202
Query: 218 LAICAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMISSI 264
L + L + ++ D + +EGD ++G K+LP++ G AA I I
Sbjct: 203 LTLIYSLAGLGIAVVNDFKSVEGDRQLGLKSLPVMFGIGTAAWICVI 249
>pir||S60222 probable chlorophyll synthetase G4 [imported] - Arabidopsis
thaliana >gi|972938|gb|AAA96740.1| (U19382) putative
chlorophyll synthetase [Arabidopsis thaliana]
>gi|3068709|gb|AAC14409.1| (AF049236) putative
chlorophyll synthetase [Arabidopsis thaliana]
Length = 387
Score = 69.1 bits (166), Expect = 7e-11
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 114 TINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEA-------L 166
TIND++D +ID +N P RPIP GAI + + + GL +A L V A
Sbjct: 153 TINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTPTVF 212
Query: 167 LFALGAYALTFIYA---WKLKPLPFIGNVAVALLTAATP------IYGALGVGRVGLAGY 217
ALG L++IY+ KLK ++GN A+ + P ++G L V
Sbjct: 213 YLALGGSLLSYIYSAPPLKLKQNGWVGNFALGASYISLPWWAGQALFGTLTPDVV----V 268
Query: 218 LAICAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMI 261
L + + + I+ D + +EGD +G ++LP+ G A I
Sbjct: 269 LTLLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGTETAKWI 312
>sp|P33326|BCHG_CHLAU BACTERIOCHLOROPHYLL SYNTHASE 34 KD CHAIN >gi|1172151|gb|AAB05629.1|
(U43963) bacteriochlorophyll synthase [Chloroflexus
aurantiacus] >gi|10198163|gb|AAG15227.1|AF288462_7
(AF288462) BchGa [Chloroflexus aurantiacus]
Length = 310
Score = 68.7 bits (165), Expect = 9e-11
Identities = 56/189 (29%), Positives = 90/189 (46%), Gaps = 18/189 (9%)
Query: 96 EKLGLVFLVVYLG----CSAGNTINDYFDVEIDRVNRPNRPIPRGAIP-RKVALYYALLQ 150
E +G + L +++ C +NDY D E+D +N P+R IP G + R V + A+L
Sbjct: 62 ESIGRLLLGMFMAGPILCGLSQVVNDYADREVDAINEPHRLIPSGQVSLRHVYILTAVLT 121
Query: 151 YMLGLALARFLGVEALLFALGAYALTFIYAWKLKPL-----PFIGNVAVALLTAATPIYG 205
+ +G ++A FLG + F A L F A+ L+P+ +IGN VA+ +
Sbjct: 122 W-IGASIALFLGRQVAFFV--ALGLVFALAYSLRPIRGKRNGWIGNALVAISYEGL-AWM 177
Query: 206 ALGVGRVGLAGYLAICAFLVNVSRE---IMKDIEDIEGDMKMGAKTLPIIIGKRRAA-MI 261
A L G A L ++ + D + I GD MG +++P+ GK AA M+
Sbjct: 178 AGHAAFAPLTGESVTIALLYSLGAHGIMTVNDFKSIRGDTIMGIRSIPVQYGKVMAARMV 237
Query: 262 SSIFGVLTV 270
+ GV +
Sbjct: 238 VTTMGVAQI 246
>emb|CAB85464.1| (AJ277210) chlorophyll synthase [Avena sativa]
Length = 378
Score = 68.7 bits (165), Expect = 9e-11
Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 20/164 (12%)
Query: 114 TINDYFDVEIDRVNRPNRPIPRGAIPRKVALYYALLQYMLGLALARFLGVEA-------L 166
TIND++D +ID +N P RPIP GAI + + + GL L L + A
Sbjct: 144 TINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLDIWAGHDFPIIF 203
Query: 167 LFALGAYALTFIYA---WKLKPLPFIGNVAVALLTAATP------IYGALGVGRVGLAGY 217
ALG L++IY+ KLK +IGN A+ P ++G L V L
Sbjct: 204 YLALGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTCL 263
Query: 218 LAICAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMI 261
+I + I+ D + IEGD +G ++LP+ G A I
Sbjct: 264 YSIAGLGI----AIVNDFKSIEGDRTLGLQSLPVAFGMETAKWI 303
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.326 0.144 0.416
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114935873
Number of Sequences: 2977
Number of extensions: 4681970
Number of successful extensions: 14165
Number of sequences better than 1.0e-10: 18
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 14134
Number of HSP's gapped (non-prelim): 20
length of query: 336
length of database: 189,106,746
effective HSP length: 54
effective length of query: 282
effective length of database: 156,788,448
effective search space: 44214342336
effective search space used: 44214342336
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 165 (68.7 bits)