BLASTP 2.0.10 [Aug-26-1999] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= PAB0023 (PAB0023) DE:Hypothetical protein (204 letters) Database: ./suso.pep; /banques/blast2/nr.pep 598,487 sequences; 189,106,746 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value pir||A75189 hypothetical protein PAB0023 - Pyrococcus abyssi (st... 412 e-114 pir||F71229 hypothetical protein PH0096 - Pyrococcus horikoshii ... 268 3e-71 gi|11425166 CGI-83 protein [Homo sapiens] 77 1e-13 gi|7705793 CGI-83 protein [Homo sapiens] >gi|11359880|pir||T4460... 77 1e-13 emb|CAC11234.1| (AL445063) conserved hypothetical protein [Therm... 74 1e-12 dbj|BAB05556.1| (AP001513) unknown conserved protein [Bacillus h... 73 2e-12 pir||B69900 conserved hypothetical protein yobT - Bacillus subti... 72 4e-12 pir||B75083 probable hydroxyacylglutathione hydrolase (EC 3.1.2.... 68 8e-11 >pir||A75189 hypothetical protein PAB0023 - Pyrococcus abyssi (strain Orsay) >gi|5457469|emb|CAB48960.1| (AJ248283) hypothetical protein [Pyrococcus abyssi] Length = 204 Score = 412 bits (1047), Expect = e-114 Identities = 204/204 (100%), Positives = 204/204 (100%) Query: 1 MILMEEVIPGIYRIFDTFVNVYIVDRGDHLVLVDTGIESTCEKIIEAVKKLGKPLKAVIL 60 MILMEEVIPGIYRIFDTFVNVYIVDRGDHLVLVDTGIESTCEKIIEAVKKLGKPLKAVIL Sbjct: 1 MILMEEVIPGIYRIFDTFVNVYIVDRGDHLVLVDTGIESTCEKIIEAVKKLGKPLKAVIL 60 Query: 61 THGHMDHTGSLRCLKEVLNPIVASQEEEVEMIERNTGVKVDVKLKDGELFEGFRVLHKPG 120 THGHMDHTGSLRCLKEVLNPIVASQEEEVEMIERNTGVKVDVKLKDGELFEGFRVLHKPG Sbjct: 61 THGHMDHTGSLRCLKEVLNPIVASQEEEVEMIERNTGVKVDVKLKDGELFEGFRVLHKPG 120 Query: 121 HTKGSICLLDEDSKSLFVGDLVVEENGKLKEVPHQYSMDPEMNRKRIIELLEVEFENLMP 180 HTKGSICLLDEDSKSLFVGDLVVEENGKLKEVPHQYSMDPEMNRKRIIELLEVEFENLMP Sbjct: 121 HTKGSICLLDEDSKSLFVGDLVVEENGKLKEVPHQYSMDPEMNRKRIIELLEVEFENLMP 180 Query: 181 AHGNPIIGKGKEKIRELVESFNLS 204 AHGNPIIGKGKEKIRELVESFNLS Sbjct: 181 AHGNPIIGKGKEKIRELVESFNLS 204 >pir||F71229 hypothetical protein PH0096 - Pyrococcus horikoshii >gi|3256482|dbj|BAA29165.1| (AP000001) 198aa long hypothetical protein [Pyrococcus horikoshii] Length = 198 Score = 268 bits (678), Expect = 3e-71 Identities = 124/192 (64%), Positives = 158/192 (81%) Query: 11 IYRIFDTFVNVYIVDRGDHLVLVDTGIESTCEKIIEAVKKLGKPLKAVILTHGHMDHTGS 70 I+RI D FVNVYI+DRGDHLVL+DTGIESTCEKI++ +++LGKPLK VI+TH H+DHTGS Sbjct: 2 IHRIKDEFVNVYIIDRGDHLVLIDTGIESTCEKILKKIEELGKPLKTVIITHYHLDHTGS 61 Query: 71 LRCLKEVLNPIVASQEEEVEMIERNTGVKVDVKLKDGELFEGFRVLHKPGHTKGSICLLD 130 L+C+K+ V + EEEV+ IE TGV+VDV +KDG++ EG +V H PGHT+GSICLLD Sbjct: 62 LKCVKDGTGAKVVAHEEEVKAIEEKTGVRVDVPVKDGDVVEGLKVFHMPGHTRGSICLLD 121 Query: 131 EDSKSLFVGDLVVEENGKLKEVPHQYSMDPEMNRKRIIELLEVEFENLMPAHGNPIIGKG 190 E+S +LFVGDL+VE +GKL EVP QYS DP MNR+RI ELL +EF+ + PAHG P++ Sbjct: 122 EESGALFVGDLMVERDGKLYEVPQQYSEDPMMNRERIKELLNIEFKAIYPAHGEPVLENA 181 Query: 191 KEKIRELVESFN 202 KEK++ELVESF+ Sbjct: 182 KEKVKELVESFS 193 >gi|11425166 CGI-83 protein [Homo sapiens] Length = 259 Score = 77.3 bits (187), Expect = 1e-13 Identities = 61/204 (29%), Positives = 103/204 (49%), Gaps = 36/204 (17%) Query: 20 NVYIVDRGDHLVLVDTGIESTCEKII---EAVKKLGKPLKAVILTHGHMDHTGSLR---- 72 N Y+V G +L+DTG + E I +A+ + ++ +++TH H DH+G + Sbjct: 32 NTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICK 91 Query: 73 --------CLKEV-LNPIVASQEEEVEMIERNTGVKVDVKLKDGELF--EG--FRVLHKP 119 C+K++ NP Q EE+ G + V LKDG++ EG RVL+ P Sbjct: 92 SINNDTTYCIKKLPRNP----QREEII----GNGEQQYVYLKDGDVIKTEGATLRVLYTP 143 Query: 120 GHTKGSICLLDEDSKSLFVGDLVVEENGKLKEVPHQYSMDPEMNRKRIIELLEVEFENLM 179 GHT + LL E+ ++F GD ++ E + E + Y MN + ELL+++ + + Sbjct: 144 GHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLYDY-----MNSLK--ELLKIKADIIY 196 Query: 180 PAHGNPIIGKGKEKIRELVESFNL 203 P HG P+I + KI++ + N+ Sbjct: 197 PGHG-PVIHNAEAKIQQYISHRNI 219 >gi|7705793 CGI-83 protein [Homo sapiens] >gi|11359880|pir||T44603 hypothetical protein CGI-83 [imported] - human >gi|4929635|gb|AAD34078.1|AF151841_1 (AF151841) CGI-83 protein [Homo sapiens] Length = 288 Score = 77.3 bits (187), Expect = 1e-13 Identities = 61/204 (29%), Positives = 103/204 (49%), Gaps = 36/204 (17%) Query: 20 NVYIVDRGDHLVLVDTGIESTCEKII---EAVKKLGKPLKAVILTHGHMDHTGSLR---- 72 N Y+V G +L+DTG + E I +A+ + ++ +++TH H DH+G + Sbjct: 32 NTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICK 91 Query: 73 --------CLKEV-LNPIVASQEEEVEMIERNTGVKVDVKLKDGELF--EG--FRVLHKP 119 C+K++ NP Q EE+ G + V LKDG++ EG RVL+ P Sbjct: 92 SINNDTTYCIKKLPRNP----QREEII----GNGEQQYVYLKDGDVIKTEGATLRVLYTP 143 Query: 120 GHTKGSICLLDEDSKSLFVGDLVVEENGKLKEVPHQYSMDPEMNRKRIIELLEVEFENLM 179 GHT + LL E+ ++F GD ++ E + E + Y MN + ELL+++ + + Sbjct: 144 GHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLYDY-----MNSLK--ELLKIKADIIY 196 Query: 180 PAHGNPIIGKGKEKIRELVESFNL 203 P HG P+I + KI++ + N+ Sbjct: 197 PGHG-PVIHNAEAKIQQYISHRNI 219 >emb|CAC11234.1| (AL445063) conserved hypothetical protein [Thermoplasma acidophilum] Length = 207 Score = 73.7 bits (178), Expect = 1e-12 Identities = 55/200 (27%), Positives = 88/200 (43%), Gaps = 20/200 (10%) Query: 6 EVIPGIYRIFDTFVNVYIVDRGDHLVLVDTGIESTCEKIIEAVKKLGKPLKAVILTHGHM 65 ++ G+ RI N Y++ +L+DTG +KII+ K G VI+TH H Sbjct: 7 KISEGVERIDGVTANSYLLTLDGKNILIDTGTAGGGKKIIDYFNKNGTKPDYVIVTHHHA 66 Query: 66 DHTGSLRCLKEVLNPIVASQEEEVEMIERN--------------TGV-----KVDVKLKD 106 DH G L+ + E NP + + E+++I TG+ DVK Sbjct: 67 DHVGGLKEISERFNPEIYVPDLEMKIIRGEEDPPKPRSFFGRMITGMLKFEPVKDVKPVS 126 Query: 107 GELFEGFRVLHKPGHTKGSICLLDEDSKSLFVGDLVVEENGKLKEVPHQYSMDPEMNRKR 166 G + PGHT GS + ED LF GD VE G+LK + +S + + Sbjct: 127 KASIPGIEEMATPGHTIGSTSYIVEDLHILFSGDAAVESGGELK-INKSFSYEINSAERS 185 Query: 167 IIELLEVEFENLMPAHGNPI 186 + + ++ ++P HG+ + Sbjct: 186 LEIIKGMKGYLVLPGHGDKV 205 >dbj|BAB05556.1| (AP001513) unknown conserved protein [Bacillus halodurans] Length = 236 Score = 73.4 bits (177), Expect = 2e-12 Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 25/203 (12%) Query: 6 EVIPGIYRIFDTFV---NVYIVDRGDHLVLVDTGIESTCEKIIEAVKKLGKPLKAVILTH 62 +V P IY++ F+ + +IV + + +VDTG+ ++I++ +KLGK +K V+LTH Sbjct: 5 QVSPHIYKLESWFLLKMSAWIVKEDEGVYIVDTGMPYMGKRILKEAEKLGK-VKGVLLTH 63 Query: 63 GHMDHTGSLRCLKEVLNPIVASQEEEVEMIERNT--------------GVKVDVKL-KDG 107 GH DH G L+ + ++ + V +++ +E GV + + +DG Sbjct: 64 GHSDHVGGLKKILDIQDLPVYVHTLDIKHMEGKEPFPGRKKREYLVEPGVAKPLPVDEDG 123 Query: 108 EL--FEGFRVLHKPGHTKGSICLLDEDSKSLFVGDLVVEENGKLKEVPHQYS--MDPEMN 163 E F H PGH+ G +C + + L GDL + GKL++ ++ M+ + Sbjct: 124 EFRCFGNLVPYHTPGHSPGHVCYYHKKDRVLIGGDLFTSKRGKLQQPIKMFTADMNEAVR 183 Query: 164 RKRIIELLEVEFENLMPAHGNPI 186 I++ L+ ++ HGN I Sbjct: 184 SGEIVKKLQPSKVSI--CHGNDI 204 >pir||B69900 conserved hypothetical protein yobT - Bacillus subtilis >gi|2619046|gb|AAB84470.1| (AF027868) YobT [Bacillus subtilis] >gi|2634301|emb|CAB13800.1| (Z99114) similar to hypothetical proteins [Bacillus subtilis] Length = 233 Score = 72.2 bits (174), Expect = 4e-12 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%) Query: 19 VNVYIVDRGDHLVLVDTGIESTCEKIIEAVKKLGKPLKAVILTHGHMDHTGSLRCLKEVL 78 VN Y+V+ + + L+D + + + II+AV +LGKPL+ ++LTH H DH GSL L + Sbjct: 21 VNCYLVEEENEVTLIDAALPGSYKGIIQAVNQLGKPLQHILLTHAHGDHVGSLDTLAQTF 80 Query: 79 -NPIVASQEEEVEMIERNTGVKVDVK-------------------LKDGELFEGFRVLHK 118 + V E + +++ +T ++ D L GE + Sbjct: 81 PHAKVMISERDSFLLQGDTSLRQDEPQTPIKGGIPKHIQTKPHQLLTGGETIGSLLAIPT 140 Query: 119 PGHTKGSICLLDEDSKSLFVGD 140 PGHT GS+ LD + +L GD Sbjct: 141 PGHTPGSMSFLDTRNGTLIAGD 162 >pir||B75083 probable hydroxyacylglutathione hydrolase (EC 3.1.2.6) PAB0703 [imported] - Pyrococcus abyssi (strain Orsay) >gi|5458479|emb|CAB49967.1| (AJ248286) HYDROXYACYLGLUTATHIONE HYDROLASE related (EC 3.1.2.6) (GLYOXALASE II) [Pyrococcus abyssi] Length = 222 Score = 67.9 bits (163), Expect = 8e-11 Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 34/196 (17%) Query: 20 NVYIVDRGDHLVLVDTGIESTCEKIIEAVKKLG--KPLKAVIL--THGHMDHTGSLRCLK 75 NVY + D L++VDTG K ++ + G + + VI+ TH H DH G K Sbjct: 21 NVYFLKSKDELLIVDTGTGVYWNKYLDTARNEGWLENVSKVIIFNTHEHFDHVGGNLVFK 80 Query: 76 EVLNPI-VASQEEEVEMIERNTGV--------------KVDVKLKDGELFE----GFRVL 116 E L + AS + + +E +V++KL+DG+ + R++ Sbjct: 81 EKLKVVEFASHKLTAKALEEGDDYIILSYYYGRRYDPHEVELKLEDGDEIKVGKVKLRLI 140 Query: 117 HKPGHTKGSICLLDEDSKSLFVGDLVVEENGKLKEVPHQYSMDPEMNRKRIIELLEV--- 173 H PGHT+GS CL E+ + +F GD V ++ P N +I+E LE+ Sbjct: 141 HTPGHTRGSSCLYYEEERIMFTGDTVFLGTYGRTDL-------PTGNEDKIVESLELLKS 193 Query: 174 -EFENLMPAHGNPIIG 188 + +P HG I G Sbjct: 194 FDVRLGLPGHGRVIKG 209 Database: ./suso.pep Posted date: Jul 6, 2001 5:57 PM Number of letters in database: 840,471 Number of sequences in database: 2977 Database: /banques/blast2/nr.pep Posted date: Dec 14, 2000 12:46 PM Number of letters in database: 188,266,275 Number of sequences in database: 595,510 Lambda K H 0.318 0.141 0.397 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78538283 Number of Sequences: 2977 Number of extensions: 3321828 Number of successful extensions: 11694 Number of sequences better than 1.0e-10: 8 Number of HSP's better than 0.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 11682 Number of HSP's gapped (non-prelim): 8 length of query: 204 length of database: 189,106,746 effective HSP length: 55 effective length of query: 149 effective length of database: 156,189,961 effective search space: 23272304189 effective search space used: 23272304189 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 163 (67.9 bits)