BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0050 (speB) DE:agmatinase (speB)
(283 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75195 agmatinase (speb) PAB0050 - Pyrococcus abyssi (strai... 571 e-162
pir||A71228 probable agmatinase - Pyrococcus horikoshii >gi|3256... 511 e-144
gi|11498254 agmatinase (speB) [Archaeoglobus fulgidus] >gi|74282... 220 2e-56
sp|Q57757|Y309_METJA HYPOTHETICAL PROTEIN MJ0309 >gi|2127750|pir... 183 3e-45
pir||H69215 agmatine ureohydrolase - Methanobacterium thermoauto... 181 7e-45
sp|P19268|YHMF_METFE HYPOTHETICAL 32.2 KD PROTEIN IN HMFB 3'REGI... 171 8e-42
gb|AAK40769.1| Agmatinase (agmatine ureohydrolase) (speB-1) [Sul... 161 7e-39
emb|CAC12186.1| (AL445066) agmatinase related protein [Thermopla... 152 5e-36
gb|AAK42842.1| Agmatinase (agmatine ureohydrolase) (speB-2) [Sul... 147 2e-34
pir||H70057 agmatinase homolog ywhG - Bacillus subtilis >gi|1565... 145 8e-34
pir||A72544 probable agmatinase APE1637 - Aeropyrum pernix (stra... 140 2e-32
pir||S74558 arginase (EC 3.5.3.1) - Synechocystis sp. (strain PC... 126 3e-28
gb|AAG19991.1| (AE005081) agmatinase; SpeB [Halobacterium sp. NR... 126 3e-28
sp|P37819|SPEB_STRCL POSSIBLE AGMATINASE (AGMATINE UREOHYDROLASE... 120 2e-26
gb|AAB34744.1| proclavaminate amidino hydrolase, PAH [Streptomyc... 120 2e-26
dbj|BAB15633.1| (AK027037) unnamed protein product [Homo sapiens] 118 6e-26
emb|CAB87207.1| (AL163641) agmatinase (fragment) [Streptomyces c... 113 3e-24
pir||H83468 agmatinase PA1421 [imported] - Pseudomonas aeruginos... 111 1e-23
pir||H75610 probable agmatinase - Deinococcus radiodurans (strai... 110 2e-23
pir||S77451 agmatinase (EC 3.5.3.11) - Synechocystis sp. (strain... 109 5e-23
pir||C72722 probable agmatinase APE0316 - Aeropyrum pernix (stra... 109 5e-23
pir||H83610 agmatinase PA0288 [imported] - Pseudomonas aeruginos... 106 4e-22
pir||D82414 agmatinase VCA0814 [imported] - Vibrio cholerae (gro... 102 5e-21
sp|P46637|ARG1_ARATH ARGINASE >gi|602422|gb|AAA85816.1| (U15019)... 100 3e-20
sp|P16936|SPEB_ECOLI AGMATINASE (AGMATINE UREOHYDROLASE) (AUH) >... 98 1e-19
pir||B81196 agmatinase (EC 3.5.3.11) NMA2016 [imported] - Neisse... 96 5e-19
sp|O49046|ARGI_SOYBN ARGINASE >gi|7488699|pir||T06222 probable a... 94 2e-18
dbj|BAB05704.1| (AP001513) formiminoglutamase (formiminoglutamat... 93 3e-18
sp|Q9ZPF5|ARG2_ARATH PROBABLE ARGINASE >gi|4325375|gb|AAD17371.1... 90 4e-17
sp|Q10088|SPEB_SCHPO PUTATIVE AGMATINASE PRECURSOR (AGMATINE URE... 89 6e-17
pir||T39168 probable agmatinase precursor [imported] - fission y... 89 8e-17
sp|P42068|HUTG_BACSU FORMIMINOGLUTAMASE (FORMIMINOGLUTAMATE HYDR... 88 1e-16
gb|AAG19578.1| (AE005047) formiminoglutamate hydrolase; HutG [Ha... 83 3e-15
gi|10955010 Probable arc gene [Agrobacterium tumefaciens] >gi|11... 75 1e-12
pir||T03484 arginase (EC 3.5.3.1) - Rhodobacter capsulatus >gi|3... 72 9e-12
>pir||F75195 agmatinase (speb) PAB0050 - Pyrococcus abyssi (strain Orsay)
>gi|5457522|emb|CAB49013.1| (AJ248283) agmatinase (speB)
[Pyrococcus abyssi]
Length = 283
Score = 571 bits (1456), Expect = e-162
Identities = 283/283 (100%), Positives = 283/283 (100%)
Query: 1 MLLYTYRSFDMELPTVSIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILD 60
MLLYTYRSFDMELPTVSIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILD
Sbjct: 1 MLLYTYRSFDMELPTVSIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILD 60
Query: 61 YDVDIAELKIADAGDVALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVA 120
YDVDIAELKIADAGDVALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVA
Sbjct: 61 YDVDIAELKIADAGDVALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVA 120
Query: 121 VLKPKSYVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATEN 180
VLKPKSYVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATEN
Sbjct: 121 VLKPKSYVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATEN 180
Query: 181 GIEWVHARDYNFDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNAL 240
GIEWVHARDYNFDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNAL
Sbjct: 181 GIEWVHARDYNFDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNAL 240
Query: 241 EWLTERKNVVGFDIMEVSGDKLGNVTSITAAKLLFHILGMSSR 283
EWLTERKNVVGFDIMEVSGDKLGNVTSITAAKLLFHILGMSSR
Sbjct: 241 EWLTERKNVVGFDIMEVSGDKLGNVTSITAAKLLFHILGMSSR 283
>pir||A71228 probable agmatinase - Pyrococcus horikoshii
>gi|3256469|dbj|BAA29152.1| (AP000001) 283aa long
hypothetical agmatinase [Pyrococcus horikoshii]
Length = 283
Score = 511 bits (1301), Expect = e-144
Identities = 241/283 (85%), Positives = 270/283 (95%)
Query: 1 MLLYTYRSFDMELPTVSIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILD 60
MLLYTYRSFDMELPTV I++ADY+I+GLPFDGTTSYKPGARFGPVLIRQATLNLESYILD
Sbjct: 1 MLLYTYRSFDMELPTVDIKDADYIILGLPFDGTTSYKPGARFGPVLIRQATLNLESYILD 60
Query: 61 YDVDIAELKIADAGDVALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVA 120
YD+DIAELKIADAGDVALPV++EDAIKV +E IKE+RS+N +ALPIFLGGEHSMTYPPV
Sbjct: 61 YDIDIAELKIADAGDVALPVSIEDAIKVAVETIKEVRSINPRALPIFLGGEHSMTYPPVK 120
Query: 121 VLKPKSYVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATEN 180
VL+PKSYVVFDAHLDLRDSYQGSRFNHACVARRIHE GV+VAIFGVRSGTREEV +A+++
Sbjct: 121 VLEPKSYVVFDAHLDLRDSYQGSRFNHACVARRIHEMGVKVAIFGVRSGTREEVMFASQS 180
Query: 181 GIEWVHARDYNFDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNAL 240
GIEWVHARDYNFDAFVDLV+SL EP+YVSID+DVFD+PLVPETGTPEPGGL FW+V+ AL
Sbjct: 181 GIEWVHARDYNFDAFVDLVSSLPEPVYVSIDVDVFDLPLVPETGTPEPGGLGFWEVIEAL 240
Query: 241 EWLTERKNVVGFDIMEVSGDKLGNVTSITAAKLLFHILGMSSR 283
EWLT+RK V GFDIMEVSGD+LGN TSITAAKLLF+++GMS+R
Sbjct: 241 EWLTKRKKVAGFDIMEVSGDRLGNSTSITAAKLLFYVIGMSAR 283
>gi|11498254 agmatinase (speB) [Archaeoglobus fulgidus] >gi|7428271|pir||F69330
agmatinase (speB) homolog - Archaeoglobus fulgidus
>gi|2649971|gb|AAB90592.1| (AE001060) agmatinase (speB)
[Archaeoglobus fulgidus]
Length = 275
Score = 220 bits (554), Expect = 2e-56
Identities = 114/271 (42%), Positives = 167/271 (61%), Gaps = 9/271 (3%)
Query: 13 LPTVSIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIAD 72
L EEA+Y+I G+P+D T S+KPG+RF P IR+A+ NLESY +DV+++ +K+ D
Sbjct: 9 LSNCDAEEAEYLIYGIPYDATQSFKPGSRFAPNAIREASWNLESYSNLFDVELSLVKVGD 68
Query: 73 AGDVALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKPKSYVVFDA 132
AG++ E ++ E + E+ + P+ +GGEHS+++ + + +VVFDA
Sbjct: 69 AGNINCDGGFEQIVERTKEFLGEV-----EGFPVAIGGEHSISFAATSKFRKACFVVFDA 123
Query: 133 HLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATENGIEWVHARDYNF 192
H DLRD + G RFNHAC RRI E+G+ VAIFGVRSG +EE ++A ENGI+++HA D+
Sbjct: 124 HFDLRDEFDGDRFNHACTTRRIFESGMRVAIFGVRSGIKEEKRFAEENGIKYLHAWDFEV 183
Query: 193 DAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERKNVVGF 252
+ V +V + IYVS+D+D FD P TPEP GL+ D + + +R VVGF
Sbjct: 184 EKAVKMVEDF-DKIYVSLDVDAFDPAFAPGVSTPEPFGLKPIDFIRFFAGIADR--VVGF 240
Query: 253 DIMEVSGDKLGNVTSITAAKLLFHILGMSSR 283
D++EV D VT AAK++ + R
Sbjct: 241 DVVEVVPDS-NKVTQTLAAKIILEAIAAKVR 270
>sp|Q57757|Y309_METJA HYPOTHETICAL PROTEIN MJ0309 >gi|2127750|pir||F64338 agmatinase (EC
3.5.3.11) - Methanococcus jannaschii
>gi|1591030|gb|AAB98295.1| (U67485) agmatinase (speB)
[Methanococcus jannaschii]
Length = 284
Score = 183 bits (459), Expect = 3e-45
Identities = 114/268 (42%), Positives = 162/268 (59%), Gaps = 10/268 (3%)
Query: 19 EEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDVAL 78
EEA+ VI +P+D TTS+KPGAR G IR A+ LE+Y D D+AELK D D+ L
Sbjct: 19 EEAEGVIFSIPYDETTSFKPGAREGGNAIRTASWGLETYSPILDRDLAELKYCDLKDLDL 78
Query: 79 PVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKP--KSYVV--FDAHL 134
+ E+ +E+ N+K I GGEHS+TYP + +K ++V FDAH
Sbjct: 79 YGSQEEIFGTIHSVSREILKENKKI--IVFGGEHSITYPIIKAVKDIYDDFIVIQFDAHC 136
Query: 135 DLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATENGIEWVHARDYNFDA 194
DLRD Y G++ +HACV RR++E + FG+RSG +EE A +N + ++ N D
Sbjct: 137 DLRDEYLGNKLSHACVMRRVYELTKNIFQFGIRSGDKEEWDLARKNNL-YLKMDLMNKDD 195
Query: 195 FVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERKN-VVGFD 253
++ + SL +PIYV+IDIDV D P TGTPEP G ++ N+L L E K+ ++GFD
Sbjct: 196 -LEYIKSLDKPIYVTIDIDVLDPAYAPGTGTPEPCGFSTRELFNSLYLLEEVKDKIIGFD 254
Query: 254 IMEVSG-DKLGNVTSITAAKLLFHILGM 280
I+EVS + N+T+ITAAK+ ++ M
Sbjct: 255 IVEVSPIYDIANITAITAAKIARELMLM 282
>pir||H69215 agmatine ureohydrolase - Methanobacterium thermoautotrophicum
(strain Delta H) >gi|2621961|gb|AAB85366.1| (AE000863)
agmatine ureohydrolase [Methanobacterium
thermoautotrophicum]
Length = 286
Score = 181 bits (455), Expect = 7e-45
Identities = 102/287 (35%), Positives = 164/287 (56%), Gaps = 13/287 (4%)
Query: 1 MLLYTYRSFDMELPTVS---IEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESY 57
ML++T+ T I E + IMG+PFD TTSY PGARFGP+ +R+A+ + E+Y
Sbjct: 1 MLIHTHEPLKFAFSTTDHERIPELSFGIMGVPFDSTTSYVPGARFGPMAVREASYSFEAY 60
Query: 58 ILDYDVDIAELKIADAGDVAL-PVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTY 116
L + ++ ++K D GD+ + P N +++ E+ + K P+ +GGEH++T
Sbjct: 61 NLRFSENV-KVKSFDFGDLEVSPGNFMKTAGFIGDSVSEVLDMGLK--PLIIGGEHTVTL 117
Query: 117 PPVAVLKPK---SYVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREE 173
P + L + V DAH+DL D+Y G R++HA V RR+HE G E+ G+RS + EE
Sbjct: 118 PVIENLPEHDSLTVVHLDAHMDLADTYAGERYSHATVMRRVHELGAEIIQIGIRSASSEE 177
Query: 174 VKYATENGIEWVHARDYNFD--AFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGL 231
++A E G+ + A + D ++L+ + P+Y+S+D+DV D P G P P GL
Sbjct: 178 AEFAGEEGVRFCMAHEVMGDPAGAIELIDGIRGPVYISVDMDVLDPAYAPSVGNPAPAGL 237
Query: 232 RFWDVVNALEWLTERKNVVGFDIMEVSGDKLGNVTSITAAKLLFHIL 278
++ L K+VVG D++EV+ + + TS+ AAK+++ IL
Sbjct: 238 T-PHIMEELVLALSGKDVVGLDVVEVASGGMADPTSVNAAKIIYDIL 283
>sp|P19268|YHMF_METFE HYPOTHETICAL 32.2 KD PROTEIN IN HMFB 3'REGION
>gi|522148|gb|AAA72081.1| (M34778) ureohydrolase
[Methanothermus fervidus]
Length = 285
Score = 171 bits (429), Expect = 8e-42
Identities = 95/260 (36%), Positives = 162/260 (61%), Gaps = 10/260 (3%)
Query: 25 IMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDVALPV-NVE 83
++G+PFD T++YKPG+RFGP++IRQA+ N E+Y L Y + ++ I D GD+ + + + +
Sbjct: 25 LLGVPFDSTSTYKPGSRFGPLMIRQASYNFENYSLHYRKKL-DVPIIDLGDIEVILGDFK 83
Query: 84 DAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAV--LKPKSYVVFDAHLDLRDSYQ 141
+ + E ++E+ + + +PI LGGEHS+TY V L + + FDAH+D+ ++Y
Sbjct: 84 NTCRNISEKVQEV--LKKGMIPIVLGGEHSITYGVVKTFDLSDVTILHFDAHMDMANTYA 141
Query: 142 GSRFNHACVARRIHE-NGVEVAIFGVRSGTREEVKYATENGIEWVHARDY--NFDAFVDL 198
G +F+HA V RRI+E + ++ GVRS T+EE ++ I++ +RD F+ ++
Sbjct: 142 GKKFSHATVMRRIYELHPKKIVQIGVRSCTKEEHEFVLNENIKYYTSRDIIEKFNMVLNE 201
Query: 199 VASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERKNVVGFDIMEVS 258
+ L P YV++DIDV D P G P P G+ + + +E + RK ++G DI+EV+
Sbjct: 202 INKLDGPFYVTVDIDVLDPGYAPGVGNPTPVGITPYHMEKFIEKIA-RKKIIGIDIVEVA 260
Query: 259 GDKLGNVTSITAAKLLFHIL 278
D++G+ ++ AAK+L+ L
Sbjct: 261 TDRIGDPAAMNAAKILYDFL 280
>gb|AAK40769.1| Agmatinase (agmatine ureohydrolase) (speB-1) [Sulfolobus
solfataricus]
Length = 297
Score = 161 bits (404), Expect = 7e-39
Identities = 98/269 (36%), Positives = 152/269 (56%), Gaps = 19/269 (7%)
Query: 19 EEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDVAL 78
E++ +VI+G+P D T+SY+PG+RF P IR++ +E Y + DVD+ E+ D GD+ L
Sbjct: 22 EKSPFVIIGIPMDITSSYRPGSRFAPSSIRESAQYIEFYSIRNDVDMGEIGFNDVGDIIL 81
Query: 79 -PVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKPKSY--VVFDAHLD 135
P NVE+ + I + + + I +GGEH++T + K + V FDAHLD
Sbjct: 82 HPSNVEENLSRISSVISYFQESGK--ITISIGGEHTITAGIIKGTKREGLCLVSFDAHLD 139
Query: 136 LRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATENGIEWVHARDYNF--- 192
LRD Y G R++HACV RRI E GV++ G R+ ++EE++YA + GI + +
Sbjct: 140 LRDEYMGYRYDHACVMRRISEYGVKIIEVGTRAVSKEEIEYAKQKGILFFTPQQIRLLGV 199
Query: 193 -DAFVDLVASLSE--PIYVSIDIDVFDIPLVPETGTPEPGGL---RFWDVVNALEWLTER 246
+ ++ S E +Y+S+D+D D P TPEP GL D++N L
Sbjct: 200 KETARRIITSTQECKSLYISVDMDGIDPAYAPGVATPEPDGLDPTNLLDIIN----LIAD 255
Query: 247 KNVVGFDIMEVSGD-KLGNVTSITAAKLL 274
K V+GFDI+EVS +TS+ A++++
Sbjct: 256 KRVIGFDIVEVSPSYDTSGITSVLASRII 284
>emb|CAC12186.1| (AL445066) agmatinase related protein [Thermoplasma acidophilum]
Length = 303
Score = 152 bits (380), Expect = 5e-36
Identities = 95/264 (35%), Positives = 142/264 (52%), Gaps = 10/264 (3%)
Query: 17 SIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDV 76
S E++DYVI G+PFD T+SY+ G+++ P IR A +NLES+ Y D+ +I+D GD+
Sbjct: 29 SYEDSDYVIFGVPFDNTSSYRRGSKYAPDSIRSAYVNLESFEFSYRFDLLRARISDLGDM 88
Query: 77 ALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKPKSY-VVFDAHLD 135
+VE + K + S + +PI LGGEHS+T V + V+ DAH D
Sbjct: 89 EESEDVEYVVDQVDRVTKMVFSDGK--IPIMLGGEHSITVGAVRNFPEDVHMVIVDAHSD 146
Query: 136 LRDSYQGSRFNHACVARRIHE--NGVEVAIFGVRSGTREEVKYATENGIEWV---HARDY 190
RDSY G++ NHACV +R E + G RS + EE + +E++ R+Y
Sbjct: 147 FRDSYMGNKLNHACVTKRALEILGPNRITSIGTRSVSLEEYQDPDFEKVEFIPSFSVREY 206
Query: 191 NFDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERKNVV 250
+ F++ + +Y+SID+D D P GTPEP GL ++V +E L+ + +
Sbjct: 207 GIERFINDIERRPGRVYISIDMDGIDPAYAPAVGTPEPFGLTDYEVRRLVERLSYK--AI 264
Query: 251 GFDIMEVSGDKLGNVTSITAAKLL 274
G DI E S TS+ A KL+
Sbjct: 265 GMDINEFSPLYDNGNTSMLAGKLI 288
>gb|AAK42842.1| Agmatinase (agmatine ureohydrolase) (speB-2) [Sulfolobus
solfataricus]
Length = 305
Score = 147 bits (367), Expect = 2e-34
Identities = 102/278 (36%), Positives = 152/278 (53%), Gaps = 21/278 (7%)
Query: 19 EEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESY--ILD-YDVDIAELKIADAGD 75
EE +G+PFD +Y+PGARFGP+ IRQ + L Y LD Y D +L D GD
Sbjct: 28 EEIKAAFLGIPFDDAVTYRPGARFGPMGIRQGSRLLRPYNQFLDTYPFD--KLNACDMGD 85
Query: 76 V-ALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKPK----SYVVF 130
+ +P +ED + ++ E+ S ++ +P GG+HS+T P + L K + V F
Sbjct: 86 INVIPGYIEDTMNAIQTSLYEIIS-SKNLVPFIAGGDHSITLPILRTLYKKFGKINIVHF 144
Query: 131 DAHLDLRDSYQGSRFNHACVARRIHENGV--EVAIFGVRSGT--REEVKYATENGIEWVH 186
D+H D DSY G ++ H RR E G+ E G+R+ T +E+++ GI
Sbjct: 145 DSHYDFWDSYWGKKYTHGTWLRRAIEEGLIKEAVQGGIRASTFSKEDLRDKERLGIRSFT 204
Query: 187 ARD--YNFDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLT 244
RD YN D + + SLS P +VSIDIDV D P TGTPE GGL ++++ + L
Sbjct: 205 IRDLKYNLDTVIREINSLSGPTHVSIDIDVVDPAFAPGTGTPEVGGLTSFEIIEIVRKLR 264
Query: 245 ERKNVVGFDIMEVSGD-KLGNVTSITAAKLLFHILGMS 281
K +VGFD++EV+ + +T++ AA +++ GMS
Sbjct: 265 FDK-LVGFDVVEVAPPYDMSEITAMLAANIIYE--GMS 299
>pir||H70057 agmatinase homolog ywhG - Bacillus subtilis
>gi|1565242|emb|CAB02517.1| (Z80360) Unknown, highly
similar to several agmatinases [Bacillus subtilis]
>gi|2636285|emb|CAB15776.1| (Z99123) similar to
agmatinase [Bacillus subtilis]
Length = 290
Score = 145 bits (361), Expect = 8e-34
Identities = 92/271 (33%), Positives = 154/271 (55%), Gaps = 16/271 (5%)
Query: 19 EEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDVAL 78
EEAD ++ G+P D T SY+PG+RFGP IR+ ++ LE Y D D+A+L DAGD+ L
Sbjct: 20 EEADAILYGMPMDWTVSYRPGSRFGPSRIREVSIGLEEYSPYLDRDLADLNFFDAGDIPL 79
Query: 79 PV-NVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKPK----SYVVFDAH 133
P N + ++ + E + + + + P+ +GGEH +++P + + K + + FDAH
Sbjct: 80 PFGNPQRSLDMIEEYVDSI--LEKGKFPMGMGGEHLVSWPVIKAMYKKYPDLAIIHFDAH 137
Query: 134 LDLRDSYQGSRFNHACVARRIHE--NGVEVAIFGVRSGTREEVKYATENGIEWVHARDYN 191
DLR Y+G +H+ R+ E V FG+RSG +EE ++A ENG +H +
Sbjct: 138 TDLRVDYEGEPLSHSTPIRKAAELIGPHNVYSFGIRSGMKEEFEWAKENG---MHISKFE 194
Query: 192 -FDAFVDLVASLS-EPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERK-N 248
+ +++ L+ P+YV+IDIDV D P TGT + GG+ +++ ++ + + N
Sbjct: 195 VLEPLKEVLPKLAGRPVYVTIDIDVLDPAHAPGTGTVDAGGITSKELLASVHEIARSEVN 254
Query: 249 VVGFDIMEVSG-DKLGNVTSITAAKLLFHIL 278
V G D++EV+ T+ TA+K++ +L
Sbjct: 255 VKGADLVEVAPVYDHSEQTANTASKIIREML 285
>pir||A72544 probable agmatinase APE1637 - Aeropyrum pernix (strain K1)
>gi|5105325|dbj|BAA80638.1| (AP000062) 338aa long
hypothetical agmatinase [Aeropyrum pernix]
Length = 338
Score = 140 bits (350), Expect = 2e-32
Identities = 102/277 (36%), Positives = 152/277 (54%), Gaps = 19/277 (6%)
Query: 17 SIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDV 76
S EE+ + ++G+P+D T+S++PG RF P IR+A++ LES + DI + IAD GDV
Sbjct: 51 SREESLFSVIGVPYDSTSSFRPGQRFAPREIRRASIELESNGYYVEGDIDRVPIADEGDV 110
Query: 77 -ALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPV-----AVLKPKSYVVF 130
A+P + ++ +++L + +P+ LGGEH +T + A +KP VV
Sbjct: 111 AAVPGSTLLTLERVARVVEDLAREGK--VPVVLGGEHLVTLGALRGLAAAGVKP-CVVVL 167
Query: 131 DAHLDLRDSYQGSRFNHACVARRI-HENGVEVAIFGVRSGTREEVKYATENG-IEWVHAR 188
DAH DLR+ Y G RF+HA V RR+ E GV++ GVR+ E + A E+G I++V R
Sbjct: 168 DAHFDLRNDYLGERFSHATVFRRVLEELGVKLLYIGVRAYEAGEERLAVESGLIDYVPMR 227
Query: 189 DYNFDAFVDLVASL------SEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEW 242
+ V + E IY+SID+D +D P G PEPGG + +
Sbjct: 228 RMDIVGVDGAVLAARRFTGDCEKIYISIDMDFYDPAYAPGVGNPEPGGASSREGLALASQ 287
Query: 243 LTERKNVVGFDIMEVSGD-KLGNVTSITAAKLLFHIL 278
L +R+ V G D++EVS G TS+ AAK L +L
Sbjct: 288 LGDRR-VCGIDVVEVSPPYDPGGATSLLAAKTLQELL 323
>pir||S74558 arginase (EC 3.5.3.1) - Synechocystis sp. (strain PCC 6803)
>gi|1651783|dbj|BAA16710.1| (D90900) arginase
[Synechocystis sp.]
Length = 306
Score = 126 bits (314), Expect = 3e-28
Identities = 90/285 (31%), Positives = 151/285 (52%), Gaps = 32/285 (11%)
Query: 17 SIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILD------YDVDIAELK- 69
S +A V++ +P++ TTSY+ G GP + +A+ LE+Y + +D+ I
Sbjct: 22 SYADAAVVVVPIPYEATTSYRKGCEHGPEAVLEASDQLEAYDEELGTSPCHDLGIYTCAP 81
Query: 70 IAD-------AGDVALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVL 122
+AD AGD A+ V D I +E K + + +GGEH++T V +
Sbjct: 82 LADSNKHPALAGD-AMVTEVCDGIAPFVEDGKFV---------VAIGGEHAITTGVVRAM 131
Query: 123 K-----PKSYVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYA 177
+ P + V DAH D+RD ++GS NHACV RR+ E G+ +R+ +EE
Sbjct: 132 QRGTSEPFTVVQIDAHGDMRDKFEGSCHNHACVMRRVLELGLPTLPIAIRAICQEEADLI 191
Query: 178 TENGIEWVHARDY--NFDAFVDLVASLS-EPIYVSIDIDVFDIPLVPETGTPEPGGLRFW 234
E I AR+ N + + +AS++ + ++++ID+D FD +P GTPEPGGL ++
Sbjct: 192 REKNIPVFWAREMADNPNWINEAIASITTQKVFLTIDMDGFDPGFMPGVGTPEPGGLGWY 251
Query: 235 DVVNALEWLTERKNVVGFDIMEVSGDKLGNVTSITAAKLLFHILG 279
+ +N L + K V+G D+ME++ + V+ + AKL + ++G
Sbjct: 252 EGLNFFRRLFQTKQVIGCDLMELAPVRGSVVSEFSTAKLAYKLMG 296
>gb|AAG19991.1| (AE005081) agmatinase; SpeB [Halobacterium sp. NRC-1]
Length = 272
Score = 126 bits (314), Expect = 3e-28
Identities = 81/256 (31%), Positives = 129/256 (49%), Gaps = 11/256 (4%)
Query: 20 EADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDVALP 79
+ADYV++G P D +TS++PG RFGP +R E Y + L + D GDV
Sbjct: 16 DADYVVVGAPLDVSTSFQPGTRFGPGELRTYAATFEDYHHRTGTHFSALSVTDYGDVRAW 75
Query: 80 VNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKPKSYVVFDAHLDLRDS 139
+V ++ + ++ A P+ +GGEH++T V L P +V DAHLDLR +
Sbjct: 76 NDVPAYLEYLNGVVTDISW--NDATPLLVGGEHTVTVAAVRALNPDVFVALDAHLDLRAA 133
Query: 140 YQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATENGIEWVHARDYNFDAFVDLV 199
G +H+ V R + E + G R+G+ EE + A ++ + + A D
Sbjct: 134 LDGDPLSHSTVTRHALDVADEAIVVGARAGSEEEWERAADSDVTVIEP-----SAVADWT 188
Query: 200 ASLSE-PIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERKNVVGFDIMEVS 258
+ + +Y+S+DID D P TGTPEP G+ ++ A+ + + VGFD++EV+
Sbjct: 189 PAFGDADVYLSVDIDAADPGYAPGTGTPEPFGMSPRELRAAVRAVA--PHAVGFDVVEVN 246
Query: 259 GDKLGNVTSITAAKLL 274
G ++ AKLL
Sbjct: 247 DRDDGQAPTL-GAKLL 261
>sp|P37819|SPEB_STRCL POSSIBLE AGMATINASE (AGMATINE UREOHYDROLASE) (AUH) (PROCLAVAMINIC
ACID AMIDINO HYDROLASE) >gi|1361423|pir||S57669
Proclavaminic acid amidino hydrolase - Streptomyces
clavuligerus >gi|295171|gb|AAA62451.1| (U87786)
proclavaminate amidinohydrolase [Streptomyces
clavuligerus] >gi|886940|emb|CAA58904.1| (X84101)
Proclavaminic acid amidino hydrolase [Streptomyces
clavuligerus] >gi|1586122|prf||2203286B proclavaminic
acid amidino hydrolase [Streptomyces clavuligerus]
Length = 313
Score = 120 bits (298), Expect = 2e-26
Identities = 95/281 (33%), Positives = 140/281 (49%), Gaps = 23/281 (8%)
Query: 22 DYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAEL-KIADAGDVAL-P 79
D V++G P+DG TSY+PGARFGP IR + + +D +L DAGD+ L P
Sbjct: 31 DVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGIDRGPGTFDLINCVDAGDINLTP 90
Query: 80 VNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLK----PKSYVVFDAHLD 135
++ AI + L N A + +GG+HS+T + + P + V DAH D
Sbjct: 91 FDMNIAIDTAQSHLSGLLKAN--AAFLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHSD 148
Query: 136 LRDSYQGSRFNHACVARR-IHENGVEVAIFGVRSGTR------EEVKYATENGIEWVHAR 188
++ G R++H R I E ++ A V+ G R + + YA +G+ V A
Sbjct: 149 TNPAFYGGRYHHGTPFRHGIDEKLIDPAAM-VQIGIRGHNPKPDSLDYARGHGVRVVTAD 207
Query: 189 DYN---FDAFVDLVASL--SEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWL 243
++ DL+ P+YVS+DIDV D P TGTP PGGL +V+ L +
Sbjct: 208 EFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAFAPGTGTPAPGGLLSREVLALLRCV 267
Query: 244 TERKNVVGFDIMEVSG-DKLGNVTSITAAKLLFHILGMSSR 283
+ K VGFD+MEVS G +TSI A ++ +L +R
Sbjct: 268 GDLK-PVGFDVMEVSPLYDHGGITSILATEIGAELLYQYAR 307
>gb|AAB34744.1| proclavaminate amidino hydrolase, PAH [Streptomyces clavuligerus,
Peptide, 313 aa]
Length = 313
Score = 120 bits (298), Expect = 2e-26
Identities = 95/281 (33%), Positives = 140/281 (49%), Gaps = 23/281 (8%)
Query: 22 DYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAEL-KIADAGDVAL-P 79
D V++G P+DG TSY+PGARFGP IR + + +D +L DAGD+ L P
Sbjct: 31 DVVVIGAPYDGGTSYRPGARFGPQAIRSESGLIHGVGIDRGPGTFDLINCVDAGDINLTP 90
Query: 80 VNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLK----PKSYVVFDAHLD 135
++ AI + L N A + +GG+HS+T + + P + V DAH D
Sbjct: 91 FDMNIAIDTAQSHLSGLLKAN--AAFLMIGGDHSLTVAALRAVAEQHGPLAVVHLDAHSD 148
Query: 136 LRDSYQGSRFNHACVARR-IHENGVEVAIFGVRSGTR------EEVKYATENGIEWVHAR 188
++ G R++H R I E ++ A V+ G R + + YA +G+ V A
Sbjct: 149 TNPAFYGGRYHHGTPFRHGIDEKLIDPAAM-VQIGIRGHNPKPDSLDYARGHGVRVVTAD 207
Query: 189 DYN---FDAFVDLVASL--SEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWL 243
++ DL+ P+YVS+DIDV D P TGTP PGGL +V+ L +
Sbjct: 208 EFGELGVGGTADLIREKVGQRPVYVSVDIDVVDPAFAPGTGTPAPGGLLSREVLALLRCV 267
Query: 244 TERKNVVGFDIMEVSG-DKLGNVTSITAAKLLFHILGMSSR 283
+ K VGFD+MEVS G +TSI A ++ +L +R
Sbjct: 268 GDLK-PVGFDVMEVSPLYDHGGITSILATEIGAELLYQYAR 307
>dbj|BAB15633.1| (AK027037) unnamed protein product [Homo sapiens]
Length = 352
Score = 118 bits (294), Expect = 6e-26
Identities = 97/291 (33%), Positives = 145/291 (49%), Gaps = 30/291 (10%)
Query: 11 MELPT-VSIEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYD-VDIAEL 68
M LP S E D +G+P D TS +PGARFGP IR+ ++ L + + L
Sbjct: 60 MRLPVQTSPEGLDAAFIGVPLDTGTSNRPGARFGPRRIREESVMLRTVNPSTGALPFQSL 119
Query: 69 KIADAGDVALPV-NVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLK---- 123
+AD GDV + + N++D+ + EA +++ V +P+ LGG+H++TYP + +
Sbjct: 120 MVADLGDVNVNLYNLQDSCRRIQEACEKI--VAAGCIPLTLGGDHTITYPILQAMAKKHG 177
Query: 124 PKSYVVFDAHLDLRDSYQGSRFNHACVARRIHENGV----EVAIFGVR--SGTREEVKYA 177
P + DAH D D G + H RR + G+ V G+R S T + +Y
Sbjct: 178 PVGLLHVDAHTDTTDKALGEKLYHGAPFRRCVDEGLLDCKRVVQIGIRGSSTTLDPYRYN 237
Query: 178 TENGIEWVHARDYNFDAFVDLVASL-----SEPIYVSIDIDVFDIPLVPETGTPEPGGL- 231
G V A D + V L+ + +PIY+S DID D P TGTPE GL
Sbjct: 238 RSQGFRVVLAEDCWMKSLVPLMGEVRQQMGGKPIYISFDIDALDPAYAPGTGTPEIAGLT 297
Query: 232 --RFWDVVNALEWLTERKNVVGFDIMEVSG--DKLGNVTSITAAKLLFHIL 278
+ +++ + L NV+G D++EVS D GN T++ AA LLF +L
Sbjct: 298 PSQALEIIRGCQGL----NVMGCDLVEVSPPYDLSGN-TALLAANLLFEML 343
>emb|CAB87207.1| (AL163641) agmatinase (fragment) [Streptomyces coelicolor A3(2)]
Length = 302
Score = 113 bits (279), Expect = 3e-24
Identities = 87/269 (32%), Positives = 135/269 (49%), Gaps = 21/269 (7%)
Query: 21 ADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVD-IAELKIADAGDVAL- 78
AD ++G+PFD SY+PGARFG IR+A+ L Y D A ++AD GD+A+
Sbjct: 37 ADVAVVGVPFDSGVSYRPGARFGGNAIREASRLLRPYNPAQDASPFALAQVADGGDIAVN 96
Query: 79 PVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPV-AVLK---PKSYVVFDAHL 134
P N+ +A++ A +L + + LGG+H++ P + +V K P + + FDAHL
Sbjct: 97 PFNIHEAVETIEAAADDLLGTGARLMT--LGGDHTIALPLLRSVAKKHGPVALLHFDAHL 154
Query: 135 DLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTR------EEVKYATENGIEWVHAR 188
D D+Y G+ + H RR E GV GTR +++ + G V +
Sbjct: 155 DTWDTYFGAEYTHGTPFRRAVEEGVLDTSALSHVGTRGPLYGKKDLTDDEKMGFGIVTSA 214
Query: 189 DYNFDAFVDLVASLSE-----PIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWL 243
D ++ L + P+Y+SIDID D P TGTPE GG+ +++ L L
Sbjct: 215 DVYRRGADEIADQLRQRIGDRPLYISIDIDCLDPAHAPGTGTPEAGGMTSRELLEILRGL 274
Query: 244 TERKNVVGFDIMEVS-GDKLGNVTSITAA 271
N+V D++EV+ +TS+ A+
Sbjct: 275 AS-CNLVSADVVEVAPAYDHAEITSVAAS 302
>pir||H83468 agmatinase PA1421 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9947369|gb|AAG04810.1|AE004571_9 (AE004571)
agmatinase [Pseudomonas aeruginosa]
Length = 319
Score = 111 bits (275), Expect = 1e-23
Identities = 94/293 (32%), Positives = 145/293 (49%), Gaps = 31/293 (10%)
Query: 11 MELPTVS----IEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDV-DI 65
M LP V ++ D +G+P D TS + G RFGP IR ++ + Y +
Sbjct: 24 MRLPHVQSPAELDALDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYNMATGAAPF 83
Query: 66 AELKIADAGDVALPV-NVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKP 124
L +AD GDVA+ N+ +A+++ IE + R + LP+ LGG+H++T P + +K
Sbjct: 84 DSLNVADIGDVAINTFNLLEAVRI-IEQEYD-RILGHGILPLTLGGDHTITLPILRAIKK 141
Query: 125 K----SYVVFDAHLDLRDSYQGSRFNHACVARRIHENGV----EVAIFGVRSG--TREEV 174
K V DAH D+ D G + H RR E + V G+R+ T E+
Sbjct: 142 KHGKVGLVHVDAHADVNDHMFGEKIAHGTTFRRAVEEDLLDCDRVVQIGLRAQGYTAEDF 201
Query: 175 KYATENGIEWVHARDYNFDAFVDLVASLSE-----PIYVSIDIDVFDIPLVPETGTPEPG 229
++ + G V A + + L+A + E P+Y+S DID D P TGTPE G
Sbjct: 202 NWSRKQGFRVVQAEECWHKSLEPLMAEVREKVGGGPVYLSFDIDGIDPAWAPGTGTPEIG 261
Query: 230 GLRFWDVVNALEWL--TERKNVVGFDIMEVSG--DKLGNVTSITAAKLLFHIL 278
GL + A+E + + +++G D++EVS D GN TS+ A LL+ +L
Sbjct: 262 GL---TTIQAMEIIRGCQGLDLIGCDLVEVSPPYDTTGN-TSLLGANLLYEML 310
>pir||H75610 probable agmatinase - Deinococcus radiodurans (strain R1)
>gi|6460508|gb|AAF12214.1|AE001862_40 (AE001862)
agmatinase, putative [Deinococcus radiodurans]
Length = 304
Score = 110 bits (273), Expect = 2e-23
Identities = 84/253 (33%), Positives = 131/253 (51%), Gaps = 18/253 (7%)
Query: 20 EADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYI--LDYDVDIAELKIADAGDVA 77
+AD +G+PFD ++PGARF P +R+A+L LD + + ADAGDV
Sbjct: 28 QADVAALGVPFDIALGFRPGARFAPRALREASLRSVPPFTGLDGKTRLQGVTFADAGDVI 87
Query: 78 LP-VNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLK--PKSYVV-FDAH 133
LP + + A EA +++R R +P+FLGG+HS++YP + P +VV DAH
Sbjct: 88 LPSLEPQLAHDRITEAARQVRG--RCRVPVFLGGDHSVSYPLLRAFADVPDLHVVQLDAH 145
Query: 134 LDLRDSYQGSRFNHACVARRIHE---NGVEVAIFGVRSGTR---EEVKYATENGIEWVHA 187
LD D+ ++++++ RR E N V + G+R G R E V A G +
Sbjct: 146 LDFTDTRNDTKWSNSSPFRRACEALPNLVHITTVGLR-GLRFDPEAVAAARARGHTIIPM 204
Query: 188 RDYNFDAFVDLVASL--SEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTE 245
D D ++A L + +Y S+D+D FD ++P T +PEP GL + + L
Sbjct: 205 DDVTAD-LAGVLAQLPRGQNVYFSVDVDGFDPAVIPGTSSPEPDGLTYAQGMKILAAAAA 263
Query: 246 RKNVVGFDIMEVS 258
VVG D++E++
Sbjct: 264 NNTVVGLDLVELA 276
>pir||S77451 agmatinase (EC 3.5.3.11) - Synechocystis sp. (strain PCC 6803)
>gi|1652376|dbj|BAA17298.1| (D90905) agmatine
ureohydrolase [Synechocystis sp.]
Length = 390
Score = 109 bits (269), Expect = 5e-23
Identities = 86/279 (30%), Positives = 136/279 (47%), Gaps = 33/279 (11%)
Query: 22 DYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAE-LKIADAGDV-ALP 79
D I+G+P D T+Y+PG RFGP IR+ + Y + VD+ E + + D GD+ +P
Sbjct: 84 DVAIVGVPHDSGTTYRPGTRFGPQGIRRISALYTPYNFEMGVDLREQISLCDVGDIFTIP 143
Query: 80 VNVE---DAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVL------KPKSYVVF 130
N E D I GI I + A PI LGG+HS+ +P V + K + F
Sbjct: 144 ANNEKSFDQISKGIAHI-----FSSGAFPIILGGDHSIGFPTVRGICRHLGDKKVGIIHF 198
Query: 131 DAHLDLRDSYQGSRFNHAC-------VARRIHENGVEVAIFGVRSGTREEVKYATENGIE 183
D H+D +++ R H C +A +N V++ I G + R+ VK E
Sbjct: 199 DRHVDTQETDLDERM-HTCPWFHATNMANAPAKNLVQLGIGGWQV-PRQGVKVCRERATN 256
Query: 184 WVHARDY---NFDAFVDLVASLS----EPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDV 236
+ D + DA D + + + +++S DID D VP TG PEPGGL +
Sbjct: 257 ILTVTDITEMSLDAAADFAIARATDGTDCVWISFDIDCIDAGFVPGTGWPEPGGLLPREA 316
Query: 237 VNALEWLTERKNVVGFDIMEVSGD-KLGNVTSITAAKLL 274
+ L+ + NV G +++EVS + ++TS+ A +++
Sbjct: 317 LYLLKRIIRETNVCGMEVVEVSPPYDISDMTSLMATRVI 355
>pir||C72722 probable agmatinase APE0316 - Aeropyrum pernix (strain K1)
>gi|5103955|dbj|BAA79271.1| (AP000059) 215aa long
hypothetical agmatinase [Aeropyrum pernix]
Length = 215
Score = 109 bits (269), Expect = 5e-23
Identities = 75/199 (37%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 90 IEAIKE-LRSVNRKALPIFLGGEHSMTYPPVAVLKP-----KSYVVFDAHLDLRDSYQGS 143
+ A++E + S+ L IFLGG+HS+TY + L+ V DAH DL D Y+G
Sbjct: 10 VSAVEEKVASLRGGRLFIFLGGDHSITYATLRALRSFYRGRLGLVYLDAHPDLYDEYEGD 69
Query: 144 RFNHACVARRIHENGV----EVAIFGVRSGTREEVKYATENGIEWVHARDYNFDAFVDLV 199
R++HAC RRI E G +V + GVR+ T ++ +A + GI + + DL
Sbjct: 70 RYSHACTLRRIVEEGFVDPRDVILAGVRAATPSQLDFAEKAGITVLGVEEAE-----DLA 124
Query: 200 ASLSE--PIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERKNVVGFDIMEV 257
A L E P Y+S D+DV D P G PEPGGL ++V ++ L E +V+ FD++E
Sbjct: 125 AYLKEGMPYYISYDLDVLDPAYAPGVGNPEPGGLSTREMVRIIKSLPE--DVLAFDVVEA 182
Query: 258 S--GDKLGNVTSITAAKLL 274
S D G +T TAAK++
Sbjct: 183 SPPHDPSG-LTLFTAAKII 200
>pir||H83610 agmatinase PA0288 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9946131|gb|AAG03677.1|AE004466_11 (AE004466)
agmatinase [Pseudomonas aeruginosa]
Length = 318
Score = 106 bits (261), Expect = 4e-22
Identities = 94/301 (31%), Positives = 145/301 (47%), Gaps = 50/301 (16%)
Query: 11 MELPTVSIEEADYV-IMGLPFDGTTSYKPGARFGPVLIRQATLNLE-----SYILDYDVD 64
M LP + A V ++G+P+DG T+ + GAR GP +R + + S I YD+
Sbjct: 24 MRLPAFTDPAALQVGLIGVPWDGGTTNRAGARHGPREVRNLSSLMRKVHHVSRIAPYDL- 82
Query: 65 IAELKIADAGDVALPVNVEDAIKVGIEAIKELRSVNRKA-----LPIFLGGEHSMTYPPV 119
+++ D GD PVN D + ++++ + R+ LP+ +GG+H +T P
Sbjct: 83 ---VRVGDLGDA--PVNPIDLL----DSLRRIEGFYRQVHAAGTLPLSVGGDHLVTLPIF 133
Query: 120 AVL---KPKSYVVFDAHLDLRDSYQGSR-FNHACVARRIHENGVEVAIFGVRSGTREEV- 174
L +P V FDAH D D Y G + H RR E G+ + V+ G R V
Sbjct: 134 RALGRERPLGMVHFDAHSDTNDRYFGDNPYTHGTPFRRAIEEGLLDPLRTVQIGIRGSVY 193
Query: 175 -----KYATENGIEWVHARDYNFDAFVDLVASLSE--------PIYVSIDIDVFDIPLVP 221
+A E GI +H ++ + + A+L+E P YVS D+DV D P
Sbjct: 194 SPDDDAFARECGIRVIHMEEF---VELGVEATLAEARRVVGAGPTYVSFDVDVLDPAFAP 250
Query: 222 ETGTPEPGG---LRFWDVVNALEWLTERKNVVGFDIMEVSGD-KLGNVTSITAAKLLFHI 277
TGTPE GG L+ +V L L ++VG D++EVS +G T++ A ++F +
Sbjct: 251 GTGTPEIGGMTSLQAQQLVRGLRGL----DLVGADVVEVSPPFDVGGATALVGATMMFEL 306
Query: 278 L 278
L
Sbjct: 307 L 307
>pir||D82414 agmatinase VCA0814 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9658241|gb|AAF96712.1| (AE004409) agmatinase
[Vibrio cholerae]
Length = 309
Score = 102 bits (252), Expect = 5e-21
Identities = 80/274 (29%), Positives = 136/274 (49%), Gaps = 24/274 (8%)
Query: 21 ADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNL--ESYILDYDVDI-AELKIADAGDVA 77
AD V++G+P D TS +PGAR GP IR+A++NL E +D ++ ++ + DAGD+
Sbjct: 33 ADVVVLGVPLDMATSGRPGARMGPDAIRRASVNLAWEGKKFPWDFNLFKKINVIDAGDLV 92
Query: 78 LPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAV----LKPKSYVVFDAH 133
+ +EA + K + + LGG+H +T P + + + FDAH
Sbjct: 93 FDCGDAEDFTYRLEAATSEILKSGKTM-LALGGDHFITLPILRAYAKHFGEMALIHFDAH 151
Query: 134 LDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATENGIEWVHARDYNFD 193
D + GS ++H + + G+ A V+ G R E K +G ++A N
Sbjct: 152 TDTYAN--GSAYDHGTMFYHAPKEGLISAKHSVQVGIRTEYK-QEGHGFNVINAMQANDM 208
Query: 194 AFVDLVASL-----SEPIYVSIDIDVFDIPLVPETGTPEPGGL---RFWDVVNALEWLTE 245
+ ++VA + +P+Y++ DID D P TGTP GGL + ++ AL+ +
Sbjct: 209 SVEEIVAQIRHIVGDKPVYLTFDIDCLDPAFAPGTGTPVCGGLSSDKILKIIRALKGI-- 266
Query: 246 RKNVVGFDIMEVSGD-KLGNVTSITAAKLLFHIL 278
N++G D++EVS ++TS+ A + +L
Sbjct: 267 --NLIGMDVVEVSPPYDQSDLTSLAGATIALELL 298
>sp|P46637|ARG1_ARATH ARGINASE >gi|602422|gb|AAA85816.1| (U15019) arginase [Arabidopsis
thaliana] >gi|4325373|gb|AAD17369.1| (AF128396)
Arabidopsis thaliana arginase (SW:P46637) (Pfam:
PF00491, Score=419.6, E=3.7e-142 N=1)
>gi|7267532|emb|CAB78014.1| (AL161513) arginase
[Arabidopsis thaliana]
Length = 342
Score = 99.8 bits (245), Expect = 3e-20
Identities = 83/291 (28%), Positives = 138/291 (46%), Gaps = 37/291 (12%)
Query: 20 EADYVIMGLPFDGTTSYKPGARFGPVLIRQAT--------------LNLESYILDY-DVD 64
+A ++G+P +S+ G F P IR+A L + D DV
Sbjct: 62 KASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSATEEGKELKDPRVLTDVGDVP 121
Query: 65 IAELKIADAGDVALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLK- 123
+ E++ D L + +++K+ +E + LR P+ LGG+HS++YP V +
Sbjct: 122 VQEIRDCGVDDDRLMNVISESVKLVMEE-EPLR-------PLVLGGDHSISYPVVRAVSE 173
Query: 124 ----PKSYVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIF--GVRSGTREEVKYA 177
P + DAH D+ D ++G++++HA RI E G + G+RS +E +
Sbjct: 174 KLGGPVDILHLDAHPDIYDCFEGNKYSHASSFARIMEGGYARRLLQVGIRSINQEGREQG 233
Query: 178 TENGIEWVHARDYNFDAFVDLVASLSEPI---YVSIDIDVFDIPLVPETGTPEPGGLRFW 234
G+E R ++ D + L E + Y+SID+D D P EPGGL F
Sbjct: 234 KRFGVEQYEMRTFSKDRPMLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFR 293
Query: 235 DVVNALEWLTERKNVVGFDIMEVS--GDKLGNVTSITAAKLLFHILGMSSR 283
DV+N L L + +VVG D++E + D + +T++ AAKL+ + S+
Sbjct: 294 DVLNILHNL--QADVVGADVVEFNPQRDTVDGMTAMVAAKLVRELAAKISK 342
>sp|P16936|SPEB_ECOLI AGMATINASE (AGMATINE UREOHYDROLASE) (AUH) >gi|281810|pir||C42604
agmatinase (EC 3.5.3.11) [validated] - Escherichia coli
>gi|147859|gb|AAA83909.1| (M32363) agmatine
ureohydrolase [Escherichia coli]
>gi|882466|gb|AAA69104.1| (U28377) agmatine
ureohydrolase [Escherichia coli]
>gi|1789306|gb|AAC75974.1| (AE000377) agmatinase
[Escherichia coli K12]
Length = 306
Score = 97.9 bits (240), Expect = 1e-19
Identities = 81/272 (29%), Positives = 127/272 (45%), Gaps = 19/272 (6%)
Query: 20 EADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNL--ESYILDYDVDIAE-LKIADAGDV 76
+AD+VI G+PFD TS + G R GP IRQ + NL E ++ D+ E L + D GD+
Sbjct: 32 DADWVITGVPFDMATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDL 91
Query: 77 ALPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAV----LKPKSYVVFDA 132
+ ++A E K + F GG+H +T P + + V FDA
Sbjct: 92 VYAFGDAREMSEKLQAHAEKLLAAGKRMLSF-GGDHFVTLPLLRAHAKHFGKMALVHFDA 150
Query: 133 HLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATENGIEWVHARDYNF 192
H D + G F+H + + G+ V+ G R E + +NG + A N
Sbjct: 151 HTDTYAN--GCEFDHGTMFYTAPKEGLIDPNHSVQIGIRTE--FDKDNGFTVLDACQVND 206
Query: 193 DAFVDLVASLSE-----PIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERK 247
+ D++A + + P+Y++ DID D P TGTP GGL + + L +
Sbjct: 207 RSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKD-L 265
Query: 248 NVVGFDIMEVS-GDKLGNVTSITAAKLLFHIL 278
N+VG D++EV+ +T++ AA L +L
Sbjct: 266 NIVGMDVVEVAPAYDQSEITALAAATLALEML 297
>pir||B81196 agmatinase (EC 3.5.3.11) NMA2016 [imported] - Neisseria
meningitidis (group B strain MD58, group A strain Z2491)
>gi|7225696|gb|AAF40906.1| (AE002403) agmatinase
[Neisseria meningitidis MC58]
>gi|7380645|emb|CAB85235.1| (AL162757) agmatinase
[Neisseria meningitidis Z2491]
Length = 307
Score = 96.0 bits (235), Expect = 5e-19
Identities = 82/272 (30%), Positives = 131/272 (48%), Gaps = 21/272 (7%)
Query: 21 ADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNL--ESYILDYDVDIAE-LKIADAGDVA 77
AD+VI G+P+D S + GARFGP IR+A++NL E + D+ E L I D GD+
Sbjct: 35 ADWVITGVPYDMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLV 94
Query: 78 LPVNVEDAIKVGIEA-IKELRSVNRKALPIFLGGEHSMTYPPVAV----LKPKSYVVFDA 132
+EA +L S ++ L LGG+H +T P + + + FDA
Sbjct: 95 FSFGDSRDFVEKMEAHAGKLLSSGKRCLS--LGGDHFITLPLLRAHARYFGKLALIHFDA 152
Query: 133 HLDLRDSYQGSRFNHACVARRIHENGVEVAIFGVRSGTREEVKYATENGIEWVHARDYNF 192
H D D+ GS ++H + + G+ V+ G R E ++ + + A N
Sbjct: 153 HTDTYDN--GSEYDHGTMFYTAPKEGLIDPSRSVQIGIRTE--HSKKLPFTVLSAPKVNE 208
Query: 193 DAFVDLVASLSE-----PIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERK 247
D+ + V + E P+Y++ DID D P TGTP GGL + L LT+
Sbjct: 209 DSVEETVRKIKETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTD-L 267
Query: 248 NVVGFDIMEVSGD-KLGNVTSITAAKLLFHIL 278
++VG D++EV+ ++T++ A + +L
Sbjct: 268 DIVGMDVVEVAPSYDQSDITALAGATIALEML 299
>sp|O49046|ARGI_SOYBN ARGINASE >gi|7488699|pir||T06222 probable arginase (EC 3.5.3.1) -
soybean >gi|2661128|gb|AAC04613.1| (AF035671) arginase
[Glycine max]
Length = 350
Score = 93.6 bits (229), Expect = 2e-18
Identities = 78/284 (27%), Positives = 139/284 (48%), Gaps = 25/284 (8%)
Query: 21 ADYVIMGLPFDGTTSYKPGARFGPVLIRQAT-LNLESYILDYDVDIAELKI-ADAGDVAL 78
A ++G+P +S+ G F P IR+ + + D+ +L+I D GD+
Sbjct: 71 ATSTLLGVPLGHNSSFLEGPAFAPPFIREGIWCGSANSTTEEGKDLKDLRIMVDVGDI-- 128
Query: 79 PVNVEDAIKVGIEAIKELRSVNRKAL-------PIFLGGEHSMTYPPVAVLK-----PKS 126
P+ +G E + ++ S + K + P+ LGG+ S++YP V + P
Sbjct: 129 PIQEMRDCGIGDERLMKVVSDSVKLVMEEDPLRPLILGGDPSISYPVVRAISEKLGGPVD 188
Query: 127 YVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIF--GVRSGTREEVKYATENGIEW 184
+ FDAH DL D ++G+ ++HA RI E G + G+RS +E + A + G+E
Sbjct: 189 VLHFDAHPDLYDEFEGNYYSHASSFARIMEGGYARRLLQVGIRSINKEGREQAKKFGVEQ 248
Query: 185 VHARDYNFD-AFVD--LVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALE 241
R ++ D F++ + ++ +Y+SID+D D E GGL F DV+N L+
Sbjct: 249 FEMRHFSKDRPFLENLNLGEGAKGVYISIDVDCLDPGYAVGVSHYESGGLSFRDVMNMLQ 308
Query: 242 WLTERKNVVGFDIMEVSGDK--LGNVTSITAAKLLFHILGMSSR 283
L + ++VG D++E + + +T++ AAK + + S+
Sbjct: 309 NL--KGDIVGGDVVEYNPQREPPDRMTAMVAAKFVRELAAKMSK 350
>dbj|BAB05704.1| (AP001513) formiminoglutamase (formiminoglutamate hydrolase)
[Bacillus halodurans]
Length = 319
Score = 93.2 bits (228), Expect = 3e-18
Identities = 78/273 (28%), Positives = 127/273 (45%), Gaps = 20/273 (7%)
Query: 25 IMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDVALPVNVED 84
++G P ++ GA F P +IR+ +Y ++ D+D+A+LK+ D GD+ + V
Sbjct: 39 LIGAPLSKSSISHSGASFAPTVIRKCLHAFSTYSVEEDLDLAQLKLTDLGDITMHVTDIV 98
Query: 85 AIKVGI-EAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKPK----SYVVFDAHLDLRDS 139
+ I E + +L + PI LGG+HS+++P + + FDAH DLR+
Sbjct: 99 GSQARIEETMTKLLENEQNWQPIVLGGDHSISFPSIKAFASAKGTIGVIQFDAHHDLRNL 158
Query: 140 YQGSRFNHACVARRIHENGVEVAIFGVRSGTRE------EVKYATENGIEWVHARDYNFD 193
G N R + E G V V+ G R+ KYA ++G++ +D N
Sbjct: 159 EDGGPCN-GTPFRSLLETGSLVGEHLVQIGIRDFSNSYPYRKYAEKHGVKVYTMKDVNAR 217
Query: 194 AFV----DLVASLS---EPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTER 246
+ + VA L + IYVS+D+DV D P PGG+ ++ + L +
Sbjct: 218 GLLTILDEAVAKLKRSVDVIYVSVDMDVLDQAHAPGCPAIGPGGMDSTTLLQGIFHLGKD 277
Query: 247 KNVVGFDIMEVSGD-KLGNVTSITAAKLLFHIL 278
V G DI+EV +TS AA ++ + L
Sbjct: 278 SLVQGMDIVEVDPTLDFREMTSRAAAHVILNYL 310
>sp|Q9ZPF5|ARG2_ARATH PROBABLE ARGINASE >gi|4325375|gb|AAD17371.1| (AF128396) similar to
arginases (Pfam: PF00491, Score=353.2, E=1.4e-119, N=1)
[Arabidopsis thaliana] >gi|7267529|emb|CAB78011.1|
(AL161513) putative arginase [Arabidopsis thaliana]
Length = 344
Score = 89.7 bits (219), Expect = 4e-17
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 23/284 (8%)
Query: 20 EADYVIMGLPFDGTTSYKPGARFGPVLIRQAT-LNLESYILDYDVDIAELKI-ADAGDVA 77
+A ++G+P +S+ G P +R+A + + ++ + ++ +D GD+
Sbjct: 64 KATTALLGVPLGHNSSFLEGPALAPPHVREAIWCGSTNSTTEEGKELKDPRVLSDVGDIP 123
Query: 78 LP------VNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLK-----PKS 126
+ V+ + +KV E++K L P+ +GG+HS++YP V + P
Sbjct: 124 VQEIREMGVDDDRLMKVVSESVK-LVMEEEPLRPLVIGGDHSISYPVVRAVSEKLGGPVD 182
Query: 127 YVVFDAHLDLRDSYQGSRFNHACVARRIHENGVEVAIF--GVRSGTREEVKYATENGIEW 184
+ DAH D+ D ++G+ ++HA RI E G + G+RS +E + G+E
Sbjct: 183 ILHLDAHPDIYDRFEGNYYSHASSFARIMEGGYARRLLQVGIRSINKEGREQGKRFGVEQ 242
Query: 185 VHARDYNFDAFVDLVASLSEPI---YVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALE 241
R ++ D + L E + Y+SID+D D EPGGL F DV+N L
Sbjct: 243 YEMRTFSKDRQMLENLKLGEGVKGVYISIDVDCLDPGFAHGVSHFEPGGLSFRDVLNILH 302
Query: 242 WLTERKNVVGFDIMEVS--GDKLGNVTSITAAKLLFHILGMSSR 283
L + ++VG D++E + D ++T++ AAK + + S+
Sbjct: 303 NL--QGDLVGADVVEYNPQRDTADDMTAMVAAKFVRELAAKMSK 344
>sp|Q10088|SPEB_SCHPO PUTATIVE AGMATINASE PRECURSOR (AGMATINE UREOHYDROLASE) (AUH)
>gi|7490114|pir||T37520 arginase family protein -
fission yeast (Schizosaccharomyces pombe)
>gi|1107898|emb|CAA92310.1| (Z68166) arginase family
protein. [Schizosaccharomyces pombe]
Length = 394
Score = 88.9 bits (217), Expect = 6e-17
Identities = 88/306 (28%), Positives = 141/306 (45%), Gaps = 51/306 (16%)
Query: 22 DYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAE------LKIADAGD 75
D +G PFD TSY+PGARFGP IR+ + L Y Y+V + KI D GD
Sbjct: 75 DIAFLGAPFDTGTSYRPGARFGPSGIREGSRRLNLY-GGYNVPMETNPFNNWAKIVDCGD 133
Query: 76 VALPVNVEDAIKV-GIE--------------AIKELRSVNRKALP--IFLGGEHSMTYPP 118
+ L + ++A+ + IE + K+ +++ LP I LGG+H++ P
Sbjct: 134 IPL-TSYDNAVAIKQIENGHFELLTRKPTSYSEKDGYALDGSVLPRVITLGGDHTIVLPI 192
Query: 119 VAVLK----PKSYVVFDAHLD-------------LRDSYQGSRFNHACVARRI-HENGVE 160
+ + P S + FD+HLD + G+ F HA + +++ +
Sbjct: 193 LRSVSRAYGPVSIIHFDSHLDSWKPKVFGGGKSSVGSINHGTYFYHASQEGLVSNDSNIH 252
Query: 161 VAIFGVRSGTREEVKYATENGIEWVHARDYNFDAFVDLVASLSEPI-----YVSIDIDVF 215
I SG + A + G E + AR+ + ++ + + + Y+SIDIDV
Sbjct: 253 AGIRTTLSGLSDYDNDA-DCGFEIIEAREIDTIGIDAIIKRIRDRVGDGIAYLSIDIDVL 311
Query: 216 DIPLVPETGTPEPGGLRFWDVVNALEWLTERKNVVGFDIMEVS-GDKLGNVTSITAAKLL 274
D P TGTPE G ++ L L K +VG DI+EV+ VT++ AA +L
Sbjct: 312 DPAYAPATGTPESAGWTTRELRTILRGLDGIK-LVGADIVEVAPAYDFAEVTTLAAADIL 370
Query: 275 FHILGM 280
F ++ +
Sbjct: 371 FEVMSI 376
>pir||T39168 probable agmatinase precursor [imported] - fission yeast
(Schizosaccharomyces pombe) >gi|2879853|emb|CAA16996.1|
(AL021815) putative agmatinase precursor
[Schizosaccharomyces pombe]
Length = 413
Score = 88.5 bits (216), Expect = 8e-17
Identities = 92/316 (29%), Positives = 141/316 (44%), Gaps = 58/316 (18%)
Query: 19 EEADYVIMGLPFDGTTSYKPGARFGPVLIRQAT---LNLESYILDYDVDIAE--LKIADA 73
E+ D I+G+PFD S++PGARFGP IR A+ + + + +V+ E KI D
Sbjct: 87 EDFDIAIIGVPFDTAVSHRPGARFGPKGIRSASSRQMAIRGFNPSLNVNPYESWAKILDC 146
Query: 74 GDVALPVNVED---AIKVGIEAIKELRSVNRKALP--------------------IFLGG 110
GD+ PV+ D A++ E +L S A P I LGG
Sbjct: 147 GDI--PVSSYDNQLAVRQMTEGYIDLLSRKATASPASNNLKTAGLAKDGIFHPRLITLGG 204
Query: 111 EHSMTYPPVAVLKP----KSYVVFDAHLDLRD------SYQGSR---FNHACVARRIHEN 157
+HS+ + L S + FD+HLD + SY S F H + +
Sbjct: 205 DHSIGLASLRALGHFYGNVSVIHFDSHLDTWNPKRYYPSYWHSDRADFTHGTMFWMASKE 264
Query: 158 GVEVAIFGVRSGTREEVK------YATEN--GIEWVHARDYNFDAFVDLVASLSEPI--- 206
G+ + +G R + Y +N G ++ A++ + +V + + +
Sbjct: 265 GLINNGTSIHAGLRTRLSGTDYYDYEEDNRVGFTFIEAQEIDEIGVNGIVERIKQVVGDT 324
Query: 207 --YVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLTERKNVVGFDIMEVSG--DKL 262
Y+SIDIDV D L P TGTPE GG ++ + L L N+VG +++EVS D
Sbjct: 325 LVYLSIDIDVVDPGLAPGTGTPETGGWTTREMKSILRKLDGHLNLVGAEVVEVSPPYDDR 384
Query: 263 GNVTSITAAKLLFHIL 278
TS+ A+ +F IL
Sbjct: 385 AESTSLAASDFIFEIL 400
>sp|P42068|HUTG_BACSU FORMIMINOGLUTAMASE (FORMIMINOGLUTAMATE HYDROLASE)
>gi|7474847|pir||B69643 formiminoglutamase (EC 3.5.3.8)
hutG [similarity] - Bacillus subtilis
>gi|603767|dbj|BAA06641.1| (D31856) HutG protein,
formiminoglutamete hydrolase [Bacillus subtilis]
>gi|2636484|emb|CAB15974.1| (Z99124) formiminoglutamate
hydrolase [Bacillus subtilis]
Length = 319
Score = 87.8 bits (214), Expect = 1e-16
Identities = 71/275 (25%), Positives = 134/275 (47%), Gaps = 24/275 (8%)
Query: 25 IMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDVALPVNVED 84
++G+P ++ GA F P IRQA + +Y + + + D GD+ ++V D
Sbjct: 39 LIGVPLSKSSISHSGASFAPGTIRQALKHSSAYSAELGEHVVSELLYDLGDI--DIHVTD 96
Query: 85 AIKVG---IEAIKELRSVNRKALPIFLGGEHSMTYPPV-AVLKPK---SYVVFDAHLDLR 137
+K + + L S + +P+ LGG++S++Y + A+ + K + + FDAH D+R
Sbjct: 97 IVKSHHHIFQTMHALLSDHPDWVPLILGGDNSISYSTIKAIAQTKGTTAVIQFDAHHDVR 156
Query: 138 DSYQGSRFNHACVARRIHENGVE---VAIFGVR--SGTREEVKYATENGIEWVHARDY-- 190
++ G N R + E +E + G+R S ++ YA ++ + +H D
Sbjct: 157 NTEDGGPTNGTPFRRLLDEEIIEGQHLIQLGIREFSNSQAYEAYAKKHNVN-IHTMDMIR 215
Query: 191 ------NFDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLRFWDVVNALEWLT 244
+ +V ++ I++S+D+DV D P PGGL +++ A++++
Sbjct: 216 EKGLIPTIKEILPVVQDKTDFIFISVDMDVLDQSHAPGCPAIGPGGLYTDELLEAVKYIA 275
Query: 245 ERKNVVGFDIMEVSGD-KLGNVTSITAAKLLFHIL 278
++ NV G +I+EV ++TS AA +L H L
Sbjct: 276 QQPNVAGIEIVEVDPTLDFRDMTSRAAAHVLLHAL 310
>gb|AAG19578.1| (AE005047) formiminoglutamate hydrolase; HutG [Halobacterium sp.
NRC-1]
Length = 306
Score = 83.1 bits (202), Expect = 3e-15
Identities = 88/287 (30%), Positives = 139/287 (47%), Gaps = 32/287 (11%)
Query: 13 LPTVS-IEEADYVIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIA 71
+PT S ++ D V++G P+DG + GAR GP IR++ ++++ D A +A
Sbjct: 27 VPTPSDADDYDAVLVGEPYDGAVIGRRGARDGPSAIRESLAGVKTHHFDAG---AVSGVA 83
Query: 72 DAGDVALP-VNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVLKPK----- 125
D GDV LP +V D EA E+ ALP+F+GG++S++Y VA L
Sbjct: 84 DLGDVVLPDGDVADTQAAVREAAAEVHET--AALPVFVGGDNSLSYANVAPLVAADNGAV 141
Query: 126 SYVVFDAHLDLRDSYQGSRF-NHACVARRIHENGVE-VAIFGVR--SGTREEVKYATENG 181
V DAHLD R G R R++ + G++ +A+ G R T + + G
Sbjct: 142 GVVSVDAHLDCR--AVGDRGPTSGTPYRQLFDAGLDALAVVGARHFETTTTYAGFLRDQG 199
Query: 182 IEWVHA------RDYNFDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGTPEPGGLR--- 232
V + RD + DA + + + + +YVS+DIDV D P P PGG++
Sbjct: 200 GRIVTSDAVAADRDGSLDAAREALDGV-DHVYVSVDIDVLD-AAYPGASAPTPGGIQPRE 257
Query: 233 FWDVVNALEWLTERKNVVGFDIMEVSGD-KLGNVTSITAAKLLFHIL 278
+ +V AL +R + GF+++E + G T AA+ + H L
Sbjct: 258 LFALVEALAASDDR--IRGFELVETAPTLDTGGRTVDAAARTIAHFL 302
>gi|10955010 Probable arc gene [Agrobacterium tumefaciens]
>gi|114144|sp|P14012|ARGI_AGRTU ARGINASE
>gi|77906|pir||S06118 arginase (EC 3.5.3.1) -
Agrobacterium tumefaciens plasmid pTiC58
>gi|39090|emb|CAA33894.1| (X15884) arginase (AA 1 - 324)
[Agrobacterium tumefaciens] >gi|496536|emb|CAA82964.1|
(Z30316) arginase [Agrobacterium tumefaciens]
>gi|6498363|dbj|BAA87815.1| (AB016260) Probable arc gene
[Agrobacterium tumefaciens]
Length = 324
Score = 74.5 bits (180), Expect = 1e-12
Identities = 82/279 (29%), Positives = 123/279 (43%), Gaps = 55/279 (19%)
Query: 25 IMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDVDIAELKIADAGDVALPVNVED 84
I+G P S +PG GP R A L L + V D GD A P VE
Sbjct: 23 ILGAPVQSGAS-QPGCLMGPDAFRTAGLTQVLTELGWAV-------TDLGD-ATPT-VEP 72
Query: 85 AIKVGIEAIKEL-------RSVNRKAL--------PIFLGGEHSMTYPPV-------AVL 122
+ A+K L RS+++KAL P+FLGG+HSM+ V A L
Sbjct: 73 ELSHPNSAVKNLDALVGWTRSLSQKALEMARSCDLPVFLGGDHSMSAGTVSGVAQRTAEL 132
Query: 123 KPKSYVVF-DAHLDLRDSYQGSRFN-HAC-VARRIHENGVE-------------VAIFGV 166
+ +V++ DAH DL + + N H VA ++G E V++ G+
Sbjct: 133 GKEQFVLWLDAHTDLHTLHTTASGNLHGTPVAYYTGQSGFEGLPPLAAPVNPRNVSMMGI 192
Query: 167 RSGTREEVKYATENGIEWVHARDYN-------FDAFVDLVASLSEPIYVSIDIDVFDIPL 219
RS EE + E G++ R + +AF+D V+ +S ++VS+D+D D +
Sbjct: 193 RSVDPEERRRVAEIGVQVADMRVLDEQGVVRPLEAFLDRVSKVSGRLHVSLDVDFLDPAI 252
Query: 220 VPETGTPEPGGLRFWDVVNALEWLTERKNVVGFDIMEVS 258
P GT PGG F + +E L + V D+ E++
Sbjct: 253 APAVGTTVPGGATFREAHLIMEMLHDSGLVTSLDLAELN 291
>pir||T03484 arginase (EC 3.5.3.1) - Rhodobacter capsulatus
>gi|3128285|gb|AAC16137.1| (AF010496) arginase
[Rhodobacter capsulatus]
Length = 309
Score = 71.8 bits (173), Expect = 9e-12
Identities = 73/285 (25%), Positives = 122/285 (42%), Gaps = 43/285 (15%)
Query: 24 VIMGLPFDGTTSYKPGARFGPVLIRQATLNLESYILDYDV-DIAELKIADAGDVA----- 77
+I+G P T ++PG GP +R A L L + + D +L I VA
Sbjct: 6 IILGAPIQSGT-HQPGCVMGPASLRTAGLIASLTALGWRIEDQGDLSIGPQAAVAHANPA 64
Query: 78 LPVNVEDAIKVGIEAIKELRSVNRKALPIFLGGEHSMTYPPVAVL--------KPKSYVV 129
+ E + + A + + + LP+FLGG+HSM+ +A + +P +
Sbjct: 65 VHHLAETRAWIALLAARAEAAAAQSDLPVFLGGDHSMSAGTMAGVAAHAARLGRPLFVLW 124
Query: 130 FDAHLDLRD-------SYQGSRFNHAC----------VARRIHENGVEVAIFGVRSGTRE 172
DAH DL + G+ +AC +A I + + + G+RS
Sbjct: 125 LDAHPDLHSLDTTESGNLHGTPVAYACGLGDFAAYPPLAHAIDPS--RLCMMGIRSVDPA 182
Query: 173 EVKYATENGIEWVHARDYN-------FDAFVDLVASLSEPIYVSIDIDVFDIPLVPETGT 225
E + E+GIE R + AF+D V + + ++VS D+D D + P GT
Sbjct: 183 EHRRILEHGIEVHDMRAIDETGVVAPLRAFIDRVKAANGLLHVSFDVDFLDPGIAPAVGT 242
Query: 226 PEPGGLRFWDVVNALEWLTERKNVVGFDIMEVSG--DKLGNVTSI 268
PGG F + +E+L + V D++E++ D+ G S+
Sbjct: 243 TVPGGATFREAHLIMEYLCDAGVVTSLDLVELNPFLDERGRTASL 287
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.140 0.409
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107779019
Number of Sequences: 2977
Number of extensions: 4684761
Number of successful extensions: 9111
Number of sequences better than 1.0e-10: 35
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 9021
Number of HSP's gapped (non-prelim): 35
length of query: 283
length of database: 189,106,746
effective HSP length: 54
effective length of query: 229
effective length of database: 156,788,448
effective search space: 35904554592
effective search space used: 35904554592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 164 (68.3 bits)