BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0059 (PAB0059) DE:Hypothetical protein
(581 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75196 hypothetical protein PAB0059 - Pyrococcus abyssi (st... 1187 0.0
pir||D71229 hypothetical protein PH0094 - Pyrococcus horikoshii ... 1074 0.0
sp|Q57722|Y274_METJA HYPOTHETICAL PROTEIN MJ0274 >gi|2128209|pir... 510 e-143
gb|AAG18871.1| (AE004990) Vng0284c [Halobacterium sp. NRC-1] 421 e-116
pir||E72234 conserved hypothetical protein - Thermotoga maritima... 406 e-112
gi|11497859 conserved hypothetical protein [Archaeoglobus fulgid... 403 e-111
pir||E72481 hypothetical protein APE2493 - Aeropyrum pernix (str... 393 e-108
>pir||H75196 hypothetical protein PAB0059 - Pyrococcus abyssi (strain Orsay)
>gi|5457532|emb|CAB49023.1| (AJ248283) hypothetical
protein [Pyrococcus abyssi]
Length = 581
Score = 1187 bits (3038), Expect = 0.0
Identities = 581/581 (100%), Positives = 581/581 (100%)
Query: 1 MIVAIIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKDSNVFYLTIDDLRATFEGEDGI 60
MIVAIIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKDSNVFYLTIDDLRATFEGEDGI
Sbjct: 1 MIVAIIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKDSNVFYLTIDDLRATFEGEDGI 60
Query: 61 RTKNKTPNFPKVKEILKKAEIIVFIGGLHTPGKYLSAVPGTVEEVAKFIKPYEGIKILGG 120
RTKNKTPNFPKVKEILKKAEIIVFIGGLHTPGKYLSAVPGTVEEVAKFIKPYEGIKILGG
Sbjct: 61 RTKNKTPNFPKVKEILKKAEIIVFIGGLHTPGKYLSAVPGTVEEVAKFIKPYEGIKILGG 120
Query: 121 PAFMGSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDYLSGREIDPFRFRNYEELRD 180
PAFMGSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDYLSGREIDPFRFRNYEELRD
Sbjct: 121 PAFMGSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDYLSGREIDPFRFRNYEELRD 180
Query: 181 YALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQEDVAE 240
YALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQEDVAE
Sbjct: 181 YALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQEDVAE 240
Query: 241 EIRVLYSLGIRHFRIGRQSCIFSYKAKPNGRVPIPNPDEVEKLFRGVRNAAPNAKTIHVD 300
EIRVLYSLGIRHFRIGRQSCIFSYKAKPNGRVPIPNPDEVEKLFRGVRNAAPNAKTIHVD
Sbjct: 241 EIRVLYSLGIRHFRIGRQSCIFSYKAKPNGRVPIPNPDEVEKLFRGVRNAAPNAKTIHVD 300
Query: 301 NANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEETYEAVK 360
NANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEETYEAVK
Sbjct: 301 NANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEETYEAVK 360
Query: 361 IINEVGARRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINIRQV 420
IINEVGARRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINIRQV
Sbjct: 361 IINEVGARRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINIRQV 420
Query: 421 VVFPGTPLWNMRDKVKTEKHKDLIKHYRHKIRHEIDLPMLKRVVPVGTVLKDVRMEIYDG 480
VVFPGTPLWNMRDKVKTEKHKDLIKHYRHKIRHEIDLPMLKRVVPVGTVLKDVRMEIYDG
Sbjct: 421 VVFPGTPLWNMRDKVKTEKHKDLIKHYRHKIRHEIDLPMLKRVVPVGTVLKDVRMEIYDG 480
Query: 481 NLTFGRQFGSYPLIVGVPKRLELDRYYDVMIVDHGLRSVTGIPVPIDVNRESSKVLGWLP 540
NLTFGRQFGSYPLIVGVPKRLELDRYYDVMIVDHGLRSVTGIPVPIDVNRESSKVLGWLP
Sbjct: 481 NLTFGRQFGSYPLIVGVPKRLELDRYYDVMIVDHGLRSVTGIPVPIDVNRESSKVLGWLP 540
Query: 541 GLGKKTLAKILAKRPFKSEEEFLNLLPREFREMYKDKVKFT 581
GLGKKTLAKILAKRPFKSEEEFLNLLPREFREMYKDKVKFT
Sbjct: 541 GLGKKTLAKILAKRPFKSEEEFLNLLPREFREMYKDKVKFT 581
>pir||D71229 hypothetical protein PH0094 - Pyrococcus horikoshii
>gi|3256480|dbj|BAA29163.1| (AP000001) 580aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 580
Score = 1074 bits (2746), Expect = 0.0
Identities = 508/579 (87%), Positives = 553/579 (94%)
Query: 1 MIVAIIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKDSNVFYLTIDDLRATFEGEDGI 60
MIVAIIDGYTDEPAGLGVPPY+GLYPRYAYGAIKKAR+D+N+FYLTIDDLRATFEGE GI
Sbjct: 1 MIVAIIDGYTDEPAGLGVPPYLGLYPRYAYGAIKKARRDANIFYLTIDDLRATFEGEQGI 60
Query: 61 RTKNKTPNFPKVKEILKKAEIIVFIGGLHTPGKYLSAVPGTVEEVAKFIKPYEGIKILGG 120
+TKNKTPNFPKVKEIL+KAE+IVFIGGLHTPGKYLSAVPG+VEEV+KFI Y G+K+LGG
Sbjct: 61 KTKNKTPNFPKVKEILEKAEVIVFIGGLHTPGKYLSAVPGSVEEVSKFISHYNGVKVLGG 120
Query: 121 PAFMGSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDYLSGREIDPFRFRNYEELRD 180
PAFMGSAK GG++VT KEL+FAEEVFDYVVYGD+EAFLFDY SGRE+DPFRFR+YEEL+
Sbjct: 121 PAFMGSAKIGGVKVTTKELRFAEEVFDYVVYGDIEAFLFDYFSGRELDPFRFRDYEELQP 180
Query: 181 YALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQEDVAE 240
YALLGAEVVKQFPGYPEFVL EIETQRGCPKAMGIGGCSFCTEPVRY VVENR QE VA+
Sbjct: 181 YALLGAEVVKQFPGYPEFVLIEIETQRGCPKAMGIGGCSFCTEPVRYRVVENRPQEYVAQ 240
Query: 241 EIRVLYSLGIRHFRIGRQSCIFSYKAKPNGRVPIPNPDEVEKLFRGVRNAAPNAKTIHVD 300
E++V Y+LGIRHFRIGRQSCIFSY AKPNGRVPIPNP+EVEKLF+ VR AAPN KT+HVD
Sbjct: 241 EVKVFYNLGIRHFRIGRQSCIFSYMAKPNGRVPIPNPEEVEKLFKAVRLAAPNVKTLHVD 300
Query: 301 NANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEETYEAVK 360
NANPAVIANYP+E++RIAKAII+YGTPGNVVAFGLETADP+VAR+NNLNATPEETYEAVK
Sbjct: 301 NANPAVIANYPEESKRIAKAIIRYGTPGNVVAFGLETADPKVARINNLNATPEETYEAVK 360
Query: 361 IINEVGARRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINIRQV 420
IINEVG +RGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINIRQV
Sbjct: 361 IINEVGGKRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINIRQV 420
Query: 421 VVFPGTPLWNMRDKVKTEKHKDLIKHYRHKIRHEIDLPMLKRVVPVGTVLKDVRMEIYDG 480
VVFPGTPLWNMRDKVKTEKHK LI+HYRHKIRHEIDLPMLKR+VPVGT+L+DVR EIYDG
Sbjct: 421 VVFPGTPLWNMRDKVKTEKHKKLIEHYRHKIRHEIDLPMLKRIVPVGTILRDVRAEIYDG 480
Query: 481 NLTFGRQFGSYPLIVGVPKRLELDRYYDVMIVDHGLRSVTGIPVPIDVNRESSKVLGWLP 540
LTFGRQFGSYPLIVG+PKR+ELDRYYDVMIVDHGLRSVTGIPVPIDVN ESSKVL WLP
Sbjct: 481 ELTFGRQFGSYPLIVGIPKRVELDRYYDVMIVDHGLRSVTGIPVPIDVNGESSKVLRWLP 540
Query: 541 GLGKKTLAKILAKRPFKSEEEFLNLLPREFREMYKDKVK 579
G+GKKTLA+ILAKRPFKSEEEFL+LLP + ++MYK K+K
Sbjct: 541 GIGKKTLARILAKRPFKSEEEFLSLLPEDVKKMYKGKIK 579
>sp|Q57722|Y274_METJA HYPOTHETICAL PROTEIN MJ0274 >gi|2128209|pir||C64334 hypothetical
protein MJ0274 - Methanococcus jannaschii
>gi|1590999|gb|AAB98258.1| (U67482) conserved
hypothetical protein [Methanococcus jannaschii]
Length = 543
Score = 510 bits (1298), Expect = e-143
Identities = 273/526 (51%), Positives = 368/526 (69%), Gaps = 35/526 (6%)
Query: 5 IIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKDSNVFYLTIDDLRATFEGEDGIRTKN 64
I+DGYTDEPAGLGVPPYIG+YPRYAYGA+ K + V Y+TID R G+
Sbjct: 31 ILDGYTDEPAGLGVPPYIGIYPRYAYGALDKY--NVKVDYITIDKFRE-IRGDFN----- 82
Query: 65 KTPNFPKVKEILKKAEIIVFIGGLHTPGKYLSAVPGTVEEVAKFIKPYEGIKILGGPAFM 124
L K + I+ I G HTPGKYL+A P T++E + Y+G+KILGGPA
Sbjct: 83 -----------LNKYDAIICICGFHTPGKYLNANPATLKEFVSILYKYDGLKILGGPAAT 131
Query: 125 --GSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDYL---SGREIDPFRFRNYEELR 179
GS+ GG I++ + FD V GDLEA L D L S +ID R+R YEELR
Sbjct: 132 KYGSSMIGG---KIEDESKYKAFFDVVAEGDLEAVLNDLLREGSIEKIDFNRYRTYEELR 188
Query: 180 DYALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQEDVA 239
+YA+ GA+VVK+ P YP +++AEIET RGCP+A+ GGCSFCTEP R+ + + R+++D+
Sbjct: 189 EYAIRGAKVVKKHPNYP-YIIAEIETYRGCPRAL-TGGCSFCTEPRRFGLPKFRDEKDII 246
Query: 240 EEIRVLYSLGIRHFRIGRQSCIFSYKAKPNGR--VPIPNPDEVEKLFRGVRNAAPNAKTI 297
+EI+VLY+ GI++FRIGRQ C+FSYK+ + + VP PN + +EKLF+G+RN + N K +
Sbjct: 247 DEIKVLYNEGIKYFRIGRQPCMFSYKSIDSEKEEVPKPNVEAIEKLFKGIRNVS-NPKVL 305
Query: 298 HVDNANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEETYE 357
H+DNANPAVIA + DE+R +AK ++KY T GNV AFG+E+ D +V + NNL TPE+ +
Sbjct: 306 HIDNANPAVIARHEDESREVAKILVKYCTSGNVAAFGVESFDEKVIKANNLLTTPEDVLK 365
Query: 358 AVKIINEVGARRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINI 417
AV+I+NEVG +RG GLP+LLPGIN++FGL GE K T+ + +E+LK+I D G M+RRINI
Sbjct: 366 AVEILNEVGGKRGETGLPYLLPGINLLFGLKGERKETFTINFEYLKEIYDRGFMIRRINI 425
Query: 418 RQVVVFPGTPLWNMRDKVKTEKHKDLIKHYRHKIRHEIDLPMLKRVVPVGTVLKDVRMEI 477
RQVV F GT + ++D K EK K L ++ K+R EID MLKRVVP GT+L+DV +E+
Sbjct: 426 RQVVPFFGTDI-TLKDIKKAEKRKKLFLWFKEKVREEIDNKMLKRVVPKGTILRDVFVEV 484
Query: 478 YD-GNLTFGRQFGSYPLIVGV-PKRLELDRYYDVMIVDHGLRSVTG 521
+ +L FGRQFGSYPL+VG+ K L++ + DV +VD+G RS+TG
Sbjct: 485 KEREDLYFGRQFGSYPLLVGILDKNLKIGEFVDVEVVDYGRRSITG 530
>gb|AAG18871.1| (AE004990) Vng0284c [Halobacterium sp. NRC-1]
Length = 564
Score = 421 bits (1070), Expect = e-116
Identities = 239/572 (41%), Positives = 329/572 (56%), Gaps = 46/572 (8%)
Query: 3 VAIIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKD-SNVFYLTIDDLRATFEGEDGIR 61
V ++DGY DEPA GVPPYI YPRY GA+ A D +NV Y TID+LR
Sbjct: 9 VTLVDGYVDEPAHFGVPPYISTYPRYTAGALVDAGVDPANVTYHTIDELRGD-------- 60
Query: 62 TKNKTPNFPKVKEILKKAEIIVFIGGLHTPGKYLSAVPGTVEEVAKFIKPYEGIKILGGP 121
T F V + A++ V++GG+ PGKY+ P +EV + +G ++GGP
Sbjct: 61 ----TAKFNDVAD----ADLFVYVGGMTVPGKYVGGTPAEPDEVRELAWLADGTSVMGGP 112
Query: 122 AFMGSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDYL-SGREIDPFRFRNYEELRD 180
G G +E++ ++ FD++ D+EA +D + +G E R+R+ +E+
Sbjct: 113 VRFG---VGEENAGAQEMERSDLDFDFLAMADIEAAAYDLVDNGLEGFEDRYRDNQEINR 169
Query: 181 YALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQEDVAE 240
+A GA VV+Q P YPE+++ E+ET RGC CSFCTEP+ Y R + V
Sbjct: 170 WAAKGAFVVEQHPNYPEYLICEMETSRGCAYR-----CSFCTEPM-YGDPSFRSADAVVT 223
Query: 241 EIRVLYSLGIRHFRIGRQSCIFSYKAKPNGRVPIPNPDEVEKLFRGVRNAAPNAKTIHVD 300
E+ LY+ G RHFR+GRQ+ I ++ G PNPD + L+ G+R AP T+H+D
Sbjct: 224 EVGELYAHGARHFRLGRQADILAF----GGDGEAPNPDALRDLYGGIREVAPELGTLHLD 279
Query: 301 NANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEETYEAVK 360
N NP I +YP+++R + I ++ TPG+ AFGLE+ADP V N+L + EE EAV+
Sbjct: 280 NMNPVTIVDYPEKSRDAIRVIAEHNTPGDTAAFGLESADPLVQEENHLLVSAEECLEAVR 339
Query: 361 IINEVGARR--------------GYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKIL 406
I+NEVG R + LP LLPGIN++ GL GE T+E +FL +L
Sbjct: 340 IVNEVGGWRPGESPADAPSWGEGSPDRLPKLLPGINLLHGLTGERAETFEHNKQFLHSLL 399
Query: 407 DDGLMVRRINIRQVVVFPGTPLWNMRDKVKTEKHKDLIKHYRHKIRHEIDLPMLKRVVPV 466
D+GLMVRRINIRQV+ F GT + + + + HK L K Y+ +R ID ML+RVVP
Sbjct: 400 DEGLMVRRINIRQVMAFEGTEMADTGVDL-AQNHKQLFKQYKTDVRETIDNAMLQRVVPP 458
Query: 467 GTVLKDVRMEIYDGNLTFGRQFGSYPLIVGVPKRLELDRYYDVMIVDHGLRSVTGIPVPI 526
GTVLKDV +E + TFGRQ G+Y L+V +P EL + DV I DHG RSVTG+P P+
Sbjct: 459 GTVLKDVTLEYHQDGKTFGRQLGTYSLLVAIPGERELGQTIDVAITDHGYRSVTGVPHPL 518
Query: 527 DVNRESSKVLGWLPGLGKKTLAKILAKRPFKS 558
D+N S L +PG+G T IL RP S
Sbjct: 519 DLNDASMDELTAIPGIGSSTAGDILVARPHDS 550
>pir||E72234 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
>gi|4982172|gb|AAD36668.1|AE001804_12 (AE001804)
conserved hypothetical protein [Thermotoga maritima]
Length = 551
Score = 406 bits (1031), Expect = e-112
Identities = 228/575 (39%), Positives = 338/575 (58%), Gaps = 45/575 (7%)
Query: 1 MIVAIIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKDSNVFYLTIDDLRATFEGEDGI 60
M I+DGY DEPA GVPPY+ Y RY GA+ D V Y+TID +R
Sbjct: 1 MRALIVDGYIDEPAAFGVPPYVSPYVRYLAGAL--VVHDVEVDYVTIDKMRKE------- 51
Query: 61 RTKNKTPNFPKVKEILKKAEIIVFIGGLHTPGKYLSAVPGTVEEVAKFIK-PYEGIKILG 119
+ EI + + + GG+ PG+Y P T+ E+ + + IKI+G
Sbjct: 52 ----------SLWEIANEYDFLFVFGGITVPGRYKGGTPLTLSELQRILSIARRPIKIVG 101
Query: 120 GPAFMGSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDYLSGREIDPFRFRNYEELR 179
GP G + GG +++ DY+V GD+EAF+ Y G DP +YE +
Sbjct: 102 GPIVGGYSLRGGSVARRFDIQA-----DYLVSGDMEAFVVSYFQGVP-DPEAKSDYELID 155
Query: 180 DYALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQEDVA 239
A GA V+++ P +P V+ EIE RGC + CSFCTEP+ + +++R+ + +
Sbjct: 156 AVAPYGAVVLEKHPNFPH-VICEIEVSRGCERRTF---CSFCTEPLLHGRLKSRDVQAIL 211
Query: 240 EEIRVLYSLGIRHFRIGRQSCIFSYKAKPNGRVPIPNPDEVEKLFRGVRNAAPNAKTIHV 299
+EI LY G R FR GR + I ++ + NG P +P+ +E+L+ G R AP+ + +H
Sbjct: 212 KEIESLYRAGCRAFRFGRAANILAFGSDRNGGKP--SPEILEELYSGTREVAPHLEVLHT 269
Query: 300 DNANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEETYEAV 359
DNANP+ + Y E R+I + I++Y TPG+V +FG+E+ D V + NN+ +PEE +A+
Sbjct: 270 DNANPSYLVTYEKECRKIVETIVRYNTPGDVFSFGVESFDENVLKKNNVQGSPEEFLKAI 329
Query: 360 KIINEVGARRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINIRQ 419
++NE+G R +G+P LLPG+N+IFGLPGET+ T + Y +LK+ILD+G ++RRINIR+
Sbjct: 330 AVVNEIGGVR-VDGIPKLLPGVNLIFGLPGETEETLKKNYSYLKRILDEGYLLRRINIRK 388
Query: 420 VVVFPGTPLWNMRDKVKTEKHKDLIKHYRH-----KIRHEIDLPMLKRVVPVGTVLKDVR 474
++ +PGTP++ + +K +KH+ IK Y H +IR EID MLKRV P GTVLK V
Sbjct: 389 LLAYPGTPVY---EYLKNKKHR--IKSYLHDQWKRRIREEIDREMLKRVFPAGTVLKKVI 443
Query: 475 MEIYDGNLTFGRQFGSYPLIVGVPKRLELDRYYDVMIVDHGLRSVTGIPVPIDVNRESSK 534
+E +G +FGRQ GSYP++VG+P DV++V HG RSVT +P P +N S +
Sbjct: 444 VEYREGKTSFGRQLGSYPILVGIPG--NHSGVLDVVVVSHGERSVTALPYPSFINSMSLE 501
Query: 535 VLGWLPGLGKKTLAKILAKRPFKSEEEFLNLLPRE 569
L +PG+G KI+ RPF+S E+ ++P E
Sbjct: 502 ELTAIPGIGSALARKIILNRPFRSWEDLKKVVPAE 536
>gi|11497859 conserved hypothetical protein [Archaeoglobus fulgidus]
>gi|3219876|sp|O29996|Y243_ARCFU HYPOTHETICAL PROTEIN
AF0243 >gi|7482981|pir||C69280 conserved hypothetical
protein AF0243 - Archaeoglobus fulgidus
>gi|2650398|gb|AAB90990.1| (AE001089) conserved
hypothetical protein [Archaeoglobus fulgidus]
Length = 529
Score = 403 bits (1024), Expect = e-111
Identities = 228/561 (40%), Positives = 328/561 (57%), Gaps = 50/561 (8%)
Query: 1 MIVAIIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKDSNVFYLTIDDLRATFEGEDGI 60
M AIIDGY DEP+ LGVPPY+ YPRY YG +K D Y TID LRA
Sbjct: 1 MKAAIIDGYVDEPSCLGVPPYVAPYPRYIYGMLKSL--DYEATYFTIDHLRA-------- 50
Query: 61 RTKNKTPNFPKVKEILKKAEIIVFIGGLHTPGKYLSAVPGTVEEVAKFIKPYEGIKILGG 120
P+ E LKK ++ V I G+ PGKYL P + +E+ F +L G
Sbjct: 51 --------HPETVERLKKFDLAVIIAGIAVPGKYLGGKPLSKKEL--FSMGLAERNLLVG 100
Query: 121 PAFMGSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDYLSGREIDPFRFRNYEELRD 180
P + ++ KEL+ E+V V+ E LF+ L G + + L
Sbjct: 101 PITL--------ELSQKELRMLEDVEIEVIDFPFERKLFERLGGEKFN---------LNA 143
Query: 181 YALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQEDVAE 240
+A GAEVV+Q P +P ++ EIET RGC G CSFC E V + R EDV
Sbjct: 144 FAARGAEVVRQHPDFPH-IICEIETYRGCYW----GKCSFCIERVHS--LWFRSPEDVLG 196
Query: 241 EIRVLYSLGIRHFRIGRQSCIFSYKAKPNGRVPIPNPDEVEKLFRGVRNAAPNAKTIHVD 300
E++ LY G+RHFR+GRQ+ FSY + G VP PNP+ ++K R + + P KT+H+D
Sbjct: 197 EVKALYDCGVRHFRLGRQTDFFSYLGEFEG-VPRPNPEAMKKFHRAIWDLCPKIKTLHID 255
Query: 301 NANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEETYEAVK 360
N NP IA +P+E+ + K I+ Y TPGNV A GLE+AD RV R N+L A+PEE A++
Sbjct: 256 NVNPKTIAEHPEESAELIKTIVMYQTPGNVAAMGLESADERVVRKNSLAASPEEVMFAIE 315
Query: 361 IINEVGARRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRINIRQV 420
+IN G YNGLP+ LPGIN + GL GETK T+EL Y FL+++++ L++RRINIRQV
Sbjct: 316 LINRYGRHPSYNGLPYFLPGINFVIGLKGETKETFELNYRFLEEVMERNLLLRRINIRQV 375
Query: 421 VVFPGTPLWNMRDKVKTEKHKDLIKHYRHKIRHEIDLPMLKRVVPVGTVLKDVRMEIYDG 480
+FPGTP+ D+ + +KH+ +++++R ID PMLK+++P G + D+R+E+ +G
Sbjct: 376 KIFPGTPMEKEGDR-RLKKHRKEFIAFKNRVRENIDTPMLKKILPKGRRITDLRVEV-EG 433
Query: 481 NLTFGRQFGSYPLIVGVPKRLELDRYYDVMIVDHGLRSVTGIPVPIDVNRESSKVLGWLP 540
+++ RQ +YP++VG+ + + Y D +VD+G RSVT + +DVN+ + + L +L
Sbjct: 434 KISYARQLATYPILVGLVGKYPRNLYVDARVVDYGHRSVTAVEADLDVNKATLEQLEFLL 493
Query: 541 GLGKKTLAKILAKRPFKSEEE 561
G K ++ +RP S+ E
Sbjct: 494 G---KVGREVYMRRPIGSDAE 511
>pir||E72481 hypothetical protein APE2493 - Aeropyrum pernix (strain K1)
>gi|5106198|dbj|BAA81509.1| (AP000064) 550aa long
hypothetical protein [Aeropyrum pernix]
Length = 550
Score = 393 bits (999), Expect = e-108
Identities = 231/542 (42%), Positives = 310/542 (56%), Gaps = 33/542 (6%)
Query: 5 IIDGYTDEPAGLGVPPYIGLYPRYAYGAIKKARKDSNVFYLTIDDLRATFEGEDGIRTKN 64
I+DGY DEP GLGVPPYI +YPRY GA+ K V Y+ +D R
Sbjct: 13 IVDGYNDEPGGLGVPPYIDVYPRYIAGALWSVDKSIRVDYVDVDRFREN----------- 61
Query: 65 KTPNFPKVKEILKKA---EIIVFIGGLHTPGKYLSAVPGTVEEVAKFIKPYEG-IKILGG 120
K L +A + +VFI G+ PG+Y+ A P EE+ + K EG +KIL G
Sbjct: 62 --------KNWLYRASTYDAVVFIAGVVVPGRYIGARPAEPEELIMWAKIIEGPLKILAG 113
Query: 121 PAFMGSAKAGGIRVTIKELKFAEEVFDYVVYGDLEAFLFDY-LSGRE-IDPFRFR-NYEE 177
PA G + KF E FD +V GD+E + D L G E DP R +Y
Sbjct: 114 PAAKWGLGVRGGSIAYPPWKFKREGFDVLVTGDVEEYFLDLALYGAEKADPGSVREDYSI 173
Query: 178 LRDYALLGAEVVKQFPGYPEFVLAEIETQRGCPKAMGIGGCSFCTEPVRYPVVENREQED 237
+ A LGA +VK P Y ++AEIET RGC + + GGCSFC EP+R ++ R E
Sbjct: 174 VDKVAPLGARIVKHHPSYGRNLVAEIETYRGCARWVS-GGCSFCVEPLRGRPIQRRP-EA 231
Query: 238 VAEEIRVLYSLGIRHFRIGRQSCIFSY--KAKPNGRVPIPNPDEVEKLFRGVRNAAPNAK 295
+A E+ LY G+ HFR+GRQ+ I Y A + P PNP E+EKLF GVR+AAP +
Sbjct: 232 IAREVEALYRAGVLHFRLGRQADILVYGSPALDSEEWPPPNPRELEKLFTGVRSAAPGLR 291
Query: 296 TIHVDNANPAVIANYPDEARRIAKAIIKYGTPGNVVAFGLETADPRVARLNNLNATPEET 355
+H+DN NP I YP + + K I+K TPG+V A GLETADP+VAR+NNLN PE+
Sbjct: 292 VLHIDNVNPGTIVRYPVASEKALKVIVKLHTPGDVAAMGLETADPKVARINNLNTHPEDV 351
Query: 356 YEAVKIINEVGARRGYNGLPWLLPGINIIFGLPGETKRTYELTYEFLKKILDDGLMVRRI 415
EAV+I+N VGA RG+NG+P LLPGIN I GLPGE TY L EFL+ +L++ L+VRR+
Sbjct: 352 LEAVRIVNRVGAARGWNGMPHLLPGINFILGLPGERSETYRLNREFLETLLNERLLVRRV 411
Query: 416 NIRQVVVFPGTPLWNMRDKVKTEKHKDLIKHYRHKIRHEIDLPMLKRVVPVGTVLKDVRM 475
N+R+++V P + M + ++ K L + +R D ML V P GTVL+ + +
Sbjct: 412 NVRRILVLPVARAYRMGAGLGGKREK-LASSFVKWVRSVFDPKMLSMVAPRGTVLRGLWV 470
Query: 476 EIYDGNLTFGRQFGSYPLIVGVPKRLELDRYYDVMIVD--HGLRSVTGIPVPIDVNRESS 533
E ++ + RQ GSYPLI V RL + D ++V H RSV +PVP+ + + S
Sbjct: 471 EECVDSICYSRQPGSYPLIAAVKCRLPRGTFLDRVLVTGVHSGRSVEAVPVPLSRHSKRS 530
Query: 534 KV 535
V
Sbjct: 531 VV 532
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.143 0.425
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 232353562
Number of Sequences: 2977
Number of extensions: 10442379
Number of successful extensions: 27429
Number of sequences better than 1.0e-10: 7
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27380
Number of HSP's gapped (non-prelim): 7
length of query: 581
length of database: 189,106,746
effective HSP length: 54
effective length of query: 527
effective length of database: 156,788,448
effective search space: 82627512096
effective search space used: 82627512096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 168 (69.9 bits)