BLASTP 2.0.10 [Aug-26-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PAB0060 (PAB0060) DE:PURINE PHOSPHORIBOSYLTRANSFERASE related
protein
         (153 letters)

Database: ./suso.pep; /banques/blast2/nr.pep
           598,487 sequences; 189,106,746 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||A75197 purine phosphoribosyltransferase related protein PAB...   316  9e-86
pir||E71229 probable purine phosphoribosyltransferase - Pyrococc...   302  2e-81
gb|AAK42568.1| Purine phosphoribosyltransferase (gpT-2) [Sulfolo...   132  2e-30
pir||A72512 probable hypoxanthine phosphoribosyltransferase APE2...   126  1e-28
gi|11497855 xanthine-guanine phosphoribosyltransferase (gptA-1) ...   106  2e-22
pir||T36612 probable purine phosphoribosyltransferase - Streptom...    92  4e-18
dbj|BAA07148.1| (D37928) purine phosphoribosyltransferase [Therm...    91  7e-18
emb|CAC12472.1| (AL445067) purine phosphoribosyltransferase rela...    83  2e-15
gb|AAK42493.1| Purine phosphoribosyltransferase (gpT-1) [Sulfolo...    79  2e-14
pir||C72745 hypothetical protein APE0490 - Aeropyrum pernix (str...    76  2e-13
gb|AAG18909.1| (AE004993) purine phosphoribosyltransferase; GptA...    76  3e-13
pir||D75215 purine phosphoribosyltransferase PAB2405 - Pyrococcu...    74  8e-13
pir||H71451 hypothetical protein PH0271 - Pyrococcus horikoshii ...    73  1e-12
pir||G81028 conserved hypothetical protein NMB1912 [imported] - ...    69  4e-11
pir||G81972 hypothetical protein NMA0543 [imported] - Neisseria ...    69  4e-11

>pir||A75197 purine phosphoribosyltransferase related protein PAB0060 -
           Pyrococcus abyssi (strain Orsay)
           >gi|5457533|emb|CAB49024.1| (AJ248283) PURINE
           PHOSPHORIBOSYLTRANSFERASE related protein [Pyrococcus
           abyssi]
           Length = 153
           
 Score =  316 bits (801), Expect = 9e-86
 Identities = 153/153 (100%), Positives = 153/153 (100%)

Query: 1   MDKVYLTWWQVDRAIFALAEKLREYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKF 60
           MDKVYLTWWQVDRAIFALAEKLREYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKF
Sbjct: 1   MDKVYLTWWQVDRAIFALAEKLREYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKF 60

Query: 61  YKGIDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLA 120
           YKGIDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLA
Sbjct: 61  YKGIDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLA 120

Query: 121 MKPWTSVVPDYYVFRTDKWIVFPWEEFPVIEKG 153
           MKPWTSVVPDYYVFRTDKWIVFPWEEFPVIEKG
Sbjct: 121 MKPWTSVVPDYYVFRTDKWIVFPWEEFPVIEKG 153


>pir||E71229 probable purine phosphoribosyltransferase - Pyrococcus horikoshii
           >gi|3256481|dbj|BAA29164.1| (AP000001) 153aa long
           hypothetical purine phosphoribosyltransferase
           [Pyrococcus horikoshii]
           Length = 153
           
 Score =  302 bits (764), Expect = 2e-81
 Identities = 143/152 (94%), Positives = 149/152 (97%)

Query: 1   MDKVYLTWWQVDRAIFALAEKLREYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKF 60
           MDKVYLTWWQVDRAIFALAEKLREYKPDVI+GVARGGLIPAVRLSHIL D+PLKVIDVKF
Sbjct: 1   MDKVYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKF 60

Query: 61  YKGIDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLA 120
           YKGIDER EKPVITIPIHGDLK K+VVIVDDVSDTGKTLEVVI+EVKKLGAKEIK+ACLA
Sbjct: 61  YKGIDERGEKPVITIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLA 120

Query: 121 MKPWTSVVPDYYVFRTDKWIVFPWEEFPVIEK 152
           MKPWTSVVPDYYVFRT+KWIVFPWEEFPVIEK
Sbjct: 121 MKPWTSVVPDYYVFRTEKWIVFPWEEFPVIEK 152


>gb|AAK42568.1| Purine phosphoribosyltransferase (gpT-2) [Sulfolobus solfataricus]
           Length = 179
           
 Score =  132 bits (330), Expect = 2e-30
 Identities = 59/148 (39%), Positives = 97/148 (64%), Gaps = 2/148 (1%)

Query: 7   TWWQVDRAIFALAEKL--REYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFYKGI 64
           +W +++ A+F++ E L    Y PDV++ V  GG+IPA  LS +L+   ++ ID+KFY+ +
Sbjct: 8   SWDEIEDAVFSIGEALVKSNYIPDVLIAVLTGGIIPAKLLSDLLDLKVIRYIDIKFYRSV 67

Query: 65  DERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLAMKPW 124
            +   KPVI       L+GKKV++VDDV+DTG+TLE V + +      ++  A L +KPW
Sbjct: 68  GKTESKPVIRSVYTDSLEGKKVLVVDDVADTGETLEAVSNVITMFNPAKVMTAALYLKPW 127

Query: 125 TSVVPDYYVFRTDKWIVFPWEEFPVIEK 152
           +  +PD+Y  + DKWI+FPW+++ V+ +
Sbjct: 128 SKRIPDFYYKQIDKWIIFPWDKWDVVRE 155


>pir||A72512 probable hypoxanthine phosphoribosyltransferase APE2071 - Aeropyrum
           pernix (strain K1) >gi|5105769|dbj|BAA81081.1|
           (AP000063) 272aa long hypothetical hypoxanthine
           phosphoribosyltransferase [Aeropyrum pernix]
           Length = 272
           
 Score =  126 bits (314), Expect = 1e-28
 Identities = 60/154 (38%), Positives = 100/154 (63%), Gaps = 2/154 (1%)

Query: 1   MDKVYLTWWQVDRAIFALAEKL--REYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDV 58
           ++ ++L+W  ++ A+  +A+K+    ++PDVIVG+ RGG++PA+ L+  L    + V+++
Sbjct: 111 VELIHLSWRDIEDAVRDVADKIVGSGFEPDVIVGILRGGIVPALLLADALGVKNIGVMEI 170

Query: 59  KFYKGIDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVAC 118
           K Y  +  R  +P +  P+  ++K + V++VDDVSD+G TL+  I+ V      ++K A 
Sbjct: 171 KLYTSVGVRKPRPFLRQPLVIEVKDRNVLVVDDVSDSGLTLQHAIEAVDLYLPAQVKTAT 230

Query: 119 LAMKPWTSVVPDYYVFRTDKWIVFPWEEFPVIEK 152
           L +KPWT++VPDYY    DKWIVFPWE   V E+
Sbjct: 231 LYIKPWTNLVPDYYSKSLDKWIVFPWERREVEEE 264


>gi|11497855 xanthine-guanine phosphoribosyltransferase (gptA-1) [Archaeoglobus
           fulgidus] >gi|7484010|pir||G69279 xanthine-guanine
           phosphoribosyltransferase (gptA-1) homolog -
           Archaeoglobus fulgidus >gi|2650402|gb|AAB90994.1|
           (AE001089) xanthine-guanine phosphoribosyltransferase
           (gptA-1) [Archaeoglobus fulgidus]
           Length = 194
           
 Score =  106 bits (261), Expect = 2e-22
 Identities = 57/145 (39%), Positives = 89/145 (61%), Gaps = 5/145 (3%)

Query: 4   VYLTWWQVDRAIFALAEKLRE--YKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFY 61
           V  TW ++ +    LA K+RE  Y+PD +V +ARGG +PA  +   L+   L  +  + +
Sbjct: 6   VLYTWDEIRKLCKELAMKVRESGYQPDAVVAIARGGWVPARIVCDYLDIRELYSVKTEHW 65

Query: 62  KGIDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLAM 121
             + E+ E+  IT P++ D+ GKK++IVDDV+DTG T+ VV+D V +    EI+VA +  
Sbjct: 66  D-VAEKREEAKITQPLNVDVSGKKILIVDDVADTGDTIRVVVDHVNQYRPAEIRVAVVDY 124

Query: 122 KPWTSVVPDYYVFRTD--KWIVFPW 144
           K  +  VPDYY  + +  +WIV+PW
Sbjct: 125 KTTSKFVPDYYAAKMEAWRWIVYPW 149


>pir||T36612 probable purine phosphoribosyltransferase - Streptomyces coelicolor
           >gi|5019327|emb|CAB44380.1| (AL078610) putative purine
           phosphoribosyltransferase [Streptomyces coelicolor
           A3(2)]
           Length = 165
           
 Score = 91.7 bits (224), Expect = 4e-18
 Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 5/149 (3%)

Query: 6   LTWWQVDRAIFALAEKLRE--YKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFYKG 63
           LT+ Q   A+  LA+ + +  Y+PD+++ +ARGG+  A  L++ L+   + +++V+FY G
Sbjct: 8   LTYEQFGVAVRELAQAVADDGYEPDIVLSIARGGVFVAGGLAYALDCKNIHLVNVEFYTG 67

Query: 64  IDERAEKPVITIPIHG--DLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLAM 121
           +    + PV+  P+    D   KKV+I DDV+DTGKTL++V D      A E++ A +  
Sbjct: 68  VGTTLDMPVMLAPVPNVIDFSDKKVLITDDVADTGKTLKLVRDFCLDTVA-EVRSAVIYE 126

Query: 122 KPWTSVVPDYYVFRTDKWIVFPWEEFPVI 150
           K  + V  +Y   RTD WI FPW   P +
Sbjct: 127 KSHSLVQCEYVWKRTDDWINFPWSVQPPV 155


>dbj|BAA07148.1| (D37928) purine phosphoribosyltransferase [Thermus aquaticus]
           Length = 154
           
 Score = 90.9 bits (222), Expect = 7e-18
 Identities = 54/147 (36%), Positives = 81/147 (54%), Gaps = 4/147 (2%)

Query: 1   MDKVYLTWWQVDRAIFALAEKLREYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKF 60
           M++++L+W  + R +  LAE L     D+++GVARGGLIP   L+  L    +    V F
Sbjct: 1   MERLHLSWEDLLRLVRRLAEALSGEPFDLVLGVARGGLIPTALLAQALGARNILTAAVMF 60

Query: 61  YKGIDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLA 120
           Y+G +   E   +  P    L GK+V++VDDV D+G+T   V   V++ G   + VA L 
Sbjct: 61  YEGEEALPEPVFLQFPPDVLLFGKRVLVVDDVWDSGRTAFAVKARVRRAGGVPV-VATLH 119

Query: 121 MKPWTSVV---PDYYVFRTDKWIVFPW 144
            KP  + V   PD+Y   T  W+V+PW
Sbjct: 120 FKPGRNRVPDRPDFYAEETAAWVVYPW 146


>emb|CAC12472.1| (AL445067) purine phosphoribosyltransferase related protein
           [Thermoplasma acidophilum]
           Length = 217
           
 Score = 83.1 bits (202), Expect = 2e-15
 Identities = 48/147 (32%), Positives = 82/147 (55%), Gaps = 5/147 (3%)

Query: 6   LTWWQVDRAIFALAEKLR-EYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFYKGI 64
           ++W  +DR    ++ K++  +  D I+G+ARGGL+PA  LS  L    L  +  + +   
Sbjct: 10  VSWADIDRWCGNISRKVQASFDVDTIIGIARGGLVPARILSDRLWVKDLLSVKTEHWGIT 69

Query: 65  DERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLAMKPW 124
             +  + V+   I+ DL GK V++VDD++DTG+++ +  D VK L  +E++ A +     
Sbjct: 70  ATKDGEAVLKTKINMDLSGKNVLVVDDITDTGESMSLAYDYVKSLKPRELRSATMLHISR 129

Query: 125 TSVVPDYY-VFRTDK---WIVFPWEEF 147
           +  VPDYY    T+K   W +FPW  +
Sbjct: 130 SKFVPDYYSELITEKNWAWFIFPWNVY 156


>gb|AAK42493.1| Purine phosphoribosyltransferase (gpT-1) [Sulfolobus solfataricus]
           Length = 210
           
 Score = 79.2 bits (192), Expect = 2e-14
 Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 6/145 (4%)

Query: 6   LTWWQVDRAIFALAEKLR--EYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFYKG 63
           +TW ++      LAEK++  EY  +VIV +ARGGL+PA  ++ +L    +  I ++ +  
Sbjct: 9   VTWDEIVSLSTKLAEKIKADEYNVNVIVAIARGGLVPARLVADVLGVFDILSIKIEHWIE 68

Query: 64  IDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEV-KKLGAKEIKVACLA-M 121
                 +  +  P   DL  K V+I+DD++DTG ++E+    V +     E+K A L  +
Sbjct: 69  TASHTPEAKVKYPFKVDLSDKNVLIIDDITDTGDSIELARKYVMENFRPTEVKTATLQYI 128

Query: 122 KPWTSVVPDYYV--FRTDKWIVFPW 144
           KP   ++PDYY     +  W ++PW
Sbjct: 129 KPAAKIIPDYYAEEIVSWAWFMYPW 153


>pir||C72745 hypothetical protein APE0490 - Aeropyrum pernix (strain K1)
           >gi|5104139|dbj|BAA79455.1| (AP000059) 226aa long
           hypothetical protein [Aeropyrum pernix]
           Length = 226
           
 Score = 76.1 bits (184), Expect = 2e-13
 Identities = 50/146 (34%), Positives = 73/146 (49%), Gaps = 12/146 (8%)

Query: 8   WWQVDRAIFALAEKLRE--YKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFYKGID 65
           W  +      L+  +RE  Y+PDV++ V+RGG +PA  L   L+   L  I  + +    
Sbjct: 8   WSDIVEWSLGLSNMIRESGYEPDVVIAVSRGGFVPARLLCDFLDVTNLLSIQSQHWVEAA 67

Query: 66  ERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEV-KKLGAKEIKVACLAMKPW 124
             AEK ++  P   DL G K ++VDD+ DTG TL +  + + K+    E++VA L    W
Sbjct: 68  RMAEKAILKFPYRVDLSGLKALLVDDIVDTGDTLLLAKEFIEKEWKPGELRVAAL---QW 124

Query: 125 TSVV----PDYYVFRTDKWIVF--PW 144
            S V    PDYY     +W  F  PW
Sbjct: 125 ISSVAKFKPDYYYMEVREWAWFQYPW 150


>gb|AAG18909.1| (AE004993) purine phosphoribosyltransferase; GptA1 [Halobacterium
           sp. NRC-1]
           Length = 230
           
 Score = 75.7 bits (183), Expect = 3e-13
 Identities = 41/127 (32%), Positives = 71/127 (55%), Gaps = 3/127 (2%)

Query: 21  KLREYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFYKGIDERAEKPVITIPI-HG 79
           K  +++PDV+V +ARGG      L   L    L  + ++ Y G  E++ +P +  P+  G
Sbjct: 30  KAADFEPDVVVALARGGWFAGRCLCDFLGLNDLTSLKMEHYVGTAEKSAEPEVRYPMPEG 89

Query: 80  DLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLAMKPWTSVVPDYYVFRTDK- 138
            ++ K V+I+DD++DTG ++E   + V+   A  ++ A L +   ++  PDY   R D+ 
Sbjct: 90  SVEDKDVLIIDDIADTGGSIEHAHEYVQDRDANAVRTATLQLLQTSAFEPDYVGERLDEW 149

Query: 139 -WIVFPW 144
            WIV+PW
Sbjct: 150 AWIVYPW 156


>pir||D75215 purine phosphoribosyltransferase PAB2405 - Pyrococcus abyssi
           (strain Orsay) >gi|5457680|emb|CAB49171.1| (AJ248283)
           purine phosphoribosyltransferase [Pyrococcus abyssi]
           Length = 215
           
 Score = 74.1 bits (179), Expect = 8e-13
 Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 3/141 (2%)

Query: 7   TWWQVDRAIFALAEKLRE--YKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFYKGI 64
           +W  ++    A A K+ E  + PDV+VG+ARGG I A      L    L  I V+ +   
Sbjct: 10  SWDDIEEWAKAGAWKVLESGWMPDVVVGLARGGWIAARLYCDYLGVKDLVSIKVEHWGIT 69

Query: 65  DERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLAMKPW 124
                +  +      D +GKKV+IVDD++DTG+++ +  + +K     EI+ A L     
Sbjct: 70  ATPDGRARLKYGAQYDFEGKKVLIVDDITDTGESMSLAYEYMKSRNPAEIRTATLLNIKG 129

Query: 125 TSVVPDYYVFRTD-KWIVFPW 144
           +  VPDYY    D  WI+FPW
Sbjct: 130 SKFVPDYYAKDIDWAWIIFPW 150


>pir||H71451 hypothetical protein PH0271 - Pyrococcus horikoshii
           >gi|3256660|dbj|BAA29343.1| (AP000001) 215aa long
           hypothetical protein [Pyrococcus horikoshii]
           Length = 215
           
 Score = 73.4 bits (177), Expect = 1e-12
 Identities = 43/121 (35%), Positives = 63/121 (51%), Gaps = 1/121 (0%)

Query: 25  YKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKFYKGIDERAEKPVITIPIHGDLKGK 84
           + PDVIVG+ARGG I A      L    L  + V+ +        +  +      D +GK
Sbjct: 30  WMPDVIVGLARGGWIAARLYCDYLGVKDLVSVKVEHWGITATPDGRARLKYGTQYDFEGK 89

Query: 85  KVVIVDDVSDTGKTLEVVIDEVKKLGAKEIKVACLAMKPWTSVVPDYYVFRTD-KWIVFP 143
           KV+IVDD++DTG+++ +  + +K     EIK A L     +  +PDYY    D  W+VFP
Sbjct: 90  KVLIVDDITDTGESMSLAYEYMKSRNPAEIKTATLLNIKGSKFIPDYYAKDIDWVWVVFP 149

Query: 144 W 144
           W
Sbjct: 150 W 150


>pir||G81028 conserved hypothetical protein NMB1912 [imported] - Neisseria
           meningitidis (group B strain MD58)
           >gi|7227169|gb|AAF42242.1| (AE002540) conserved
           hypothetical protein [Neisseria meningitidis MC58]
           Length = 175
           
 Score = 68.7 bits (165), Expect = 4e-11
 Identities = 48/163 (29%), Positives = 82/163 (49%), Gaps = 15/163 (9%)

Query: 3   KVYLTWWQVDRAIFALAEKLR--EYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKF 60
           K++ T+  + R I ALAEK+R  + K D ++ +  GG IPA R+     ++P+  +   +
Sbjct: 4   KIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA-RMLRCFLEIPIYAVTTAY 62

Query: 61  YKG-----IDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIK 115
           Y       + E  +K     P+   L+GK V++VD+V D+  T+E  + E+ K     I 
Sbjct: 63  YDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDSRVTMEFCLKELLKEDFGTIG 122

Query: 116 VACL--AMKPWTSVVPD---YY--VFRTDKWIVFPWEEFPVIE 151
           VA L   +K     +P+   Y+  +   D WI +PW+   + E
Sbjct: 123 VAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDALDIDE 165


>pir||G81972 hypothetical protein NMA0543 [imported] - Neisseria meningitidis
           (group A strain Z2491) >gi|7379282|emb|CAB83836.1|
           (AL162753) hypothetical protein NMA0543 [Neisseria
           meningitidis Z2491]
           Length = 175
           
 Score = 68.7 bits (165), Expect = 4e-11
 Identities = 48/163 (29%), Positives = 82/163 (49%), Gaps = 15/163 (9%)

Query: 3   KVYLTWWQVDRAIFALAEKLR--EYKPDVIVGVARGGLIPAVRLSHILNDVPLKVIDVKF 60
           K++ T+  + R I ALAEK+R  + K D ++ +  GG IPA R+     ++P+  +   +
Sbjct: 4   KIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA-RMLRCFLEIPIYAVTTAY 62

Query: 61  YKG-----IDERAEKPVITIPIHGDLKGKKVVIVDDVSDTGKTLEVVIDEVKKLGAKEIK 115
           Y       + E  +K     P+   L+GK V++VD+V D+  T+E  + E+ K     I 
Sbjct: 63  YDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDSRVTMEFCLTELLKEDFGTIG 122

Query: 116 VACL--AMKPWTSVVPD---YY--VFRTDKWIVFPWEEFPVIE 151
           VA L   +K     +P+   Y+  +   D WI +PW+   + E
Sbjct: 123 VAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDALDIDE 165


  Database: ./suso.pep
    Posted date:  Jul 6, 2001  5:57 PM
  Number of letters in database: 840,471
  Number of sequences in database:  2977
  
  Database: /banques/blast2/nr.pep
    Posted date:  Dec 14, 2000 12:46 PM
  Number of letters in database: 188,266,275
  Number of sequences in database:  595,510
  
Lambda     K      H
   0.322    0.143    0.439 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59320326
Number of Sequences: 2977
Number of extensions: 2401116
Number of successful extensions: 7931
Number of sequences better than 1.0e-10: 15
Number of HSP's better than  0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7907
Number of HSP's gapped (non-prelim): 15
length of query: 153
length of database: 189,106,746
effective HSP length: 49
effective length of query: 104
effective length of database: 159,780,883
effective search space: 16617211832
effective search space used: 16617211832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.9 bits)
S2: 162 (67.5 bits)