BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0102 (PAB0102) DE:ANION TRANSPORT SYSTEM PERMEASE PROTEIN
(248 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75203 anion transport system permease protein PAB0102 - Py... 475 e-133
pir||H71236 probable transport system protein - Pyrococcus horik... 431 e-120
gi|11497713 sulfate ABC transporter, permease protein (cysT) [Ar... 231 6e-60
pir||G64470 sulfate/thiosulfate transport protein homolog - Meth... 222 3e-57
gb|AAG19864.1| (AE005071) sulfate transport system permease prot... 148 6e-35
gb|AAD47601.1|AF146563_1 (AF146563) ABC transporter permease [Me... 144 9e-34
pir||T45007 probable ABC-transport protein [imported] - Halofera... 141 8e-33
pir||T36640 probable ABC-type transport system membrane protein ... 127 1e-28
pir||C75613 probable molybdenum ABC transporter, permease protei... 125 5e-28
sp|Q01895|CYST_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 116 2e-25
pir||A82426 molybdenum ABC transporter, permease protein VCA0725... 115 5e-25
gi|11466435 probable transport protein [Mesostigma viride] >gi|7... 115 7e-25
pir||D69223 anion transport system permease protein - Methanobac... 114 9e-25
pir||B70683 probable cysT - Mycobacterium tuberculosis (strain H... 113 3e-24
gi|11467877 probable transport protein [Nephroselmis olivacea] >... 111 8e-24
gi|11466750 ORF288 [Marchantia polymorpha] >gi|126795|sp|P26246|... 111 1e-23
sp|P27367|CYST_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 110 1e-23
emb|CAC12179.1| (AL445066) ABC transporter permease related prot... 107 2e-22
pir||B83610 sulfate transport protein CysT PA0282 [imported] - P... 106 4e-22
pir||A70683 probable cysW - Mycobacterium tuberculosis (strain H... 105 6e-22
dbj|BAB06847.1| (AP001517) sulfate ABC transporter (permease) [B... 105 6e-22
emb|CAB53107.1| (AJ245645) sulfate transport permease protein [P... 104 1e-21
pir||S31095 cysT protein - Synechocystis sp. (PCC 6803) (fragmen... 102 3e-21
sp|P09834|MODB_ECOLI MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 102 4e-21
sp|P45322|MODB_HAEIN MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 102 4e-21
pir||BVECHJ molybdenum transport protein modB - Escherichia coli... 102 5e-21
pir||G81875 sulfate ABC transporter, inner membrane protein NMA1... 102 5e-21
pir||C81147 sulfate ABC transporter, permease protein NMB0880 [i... 101 7e-21
pir||H83568 probable permease of ABC transporter PA0606 [importe... 101 9e-21
sp|P27370|CYSW_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 99 5e-20
pir||F82694 ABC transporter sulfate permease XF1345 [imported] -... 98 8e-20
pir||T44855 molybdenum transport transmembrane protein modB [imp... 98 8e-20
gi|7524888 sulfate transport system permease protein [Chlorella ... 98 1e-19
pir||F70308 Molybdenum transport system permease - Aquifex aeoli... 98 1e-19
sp|P16701|CYST_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 98 1e-19
pir||A82310 sulfate ABC transporter, permease protein VC0539 [im... 96 4e-19
pir||A81876 sulfate ABC transporter, inner membrane protein NMA1... 95 7e-19
sp|Q08382|MODB_RHOCA MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 95 9e-19
pir||D81147 sulfate ABC transporter, permease protein NMB0881 [i... 95 9e-19
sp|P95156|MODB_MYCTU MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 93 3e-18
sp|P37731|MODC_AZOVI MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEI... 92 5e-18
dbj|BAB06848.1| (AP001517) sulfate ABC transporter (permease) [B... 92 5e-18
gb|AAC83134.1| (AF109295) ModB [Staphylococcus carnosus] 92 6e-18
emb|CAA63862.1| (X94148) putative inner membrane protein [Bacill... 92 8e-18
gb|AAA83839.1| (M16182) unknown protein [Escherichia coli] 91 1e-17
gb|AAG35386.1| (AF030414) ModB [Gluconacetobacter diazotrophicus] 91 1e-17
gb|AAK41295.1| Sulfate ABC transporter, permease protein [Sulfol... 91 1e-17
pir||A81449 probable molybdenum transport system permease protei... 89 5e-17
pir||A83413 molybdenum transport protein ModB PA1862 [imported] ... 88 9e-17
pir||E75187 sugar abc transporter, permease protein PAB2335 - Py... 88 1e-16
pir||A83610 sulfate transport protein CysW PA0281 [imported] - P... 88 1e-16
pir||S77084 ABC-type transport protein sll0739 - Synechocystis s... 87 3e-16
sp|P18795|NIFC_CLOPA PROBABLE TRANSPORT SYSTEM PERMEASE PROTEIN ... 86 4e-16
emb|CAA67414.1| (X98917) orf3 [Methanopyrus kandleri] 86 4e-16
pir||E81015 ABC transporter, permease protein NMB2026 [imported]... 86 4e-16
pir||D71220 probable sugar transport membrane protein - Pyrococc... 85 8e-16
pir||A81958 probable permease NMA0414 [imported] - Neisseria men... 84 1e-15
sp|P74547|CYSW_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 83 2e-15
pir||G75412 spermidine/putrescine ABC transporter, permease prot... 83 4e-15
pir||E83605 probable permease of ABC transporter PA0324 [importe... 83 4e-15
pir||B71007 hypothetical protein PH1352 - Pyrococcus horikoshii ... 82 9e-15
pir||T35451 ABC transporter integral membrane protein - Streptom... 81 1e-14
gb|AAG20068.1| (AE005086) spermidine/putrescine ABC transporter ... 81 1e-14
sp|Q44123|AFUB_ACTPL FERRIC TRANSPORT SYSTEM PERMEASE PROTEIN AF... 81 1e-14
sp|P16702|CYSW_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN C... 80 2e-14
pir||G81929 probable iron-uptake permease inner membrane protein... 80 2e-14
pir||G75267 ABC transporter, permease protein, CysTW family - De... 80 3e-14
gb|AAB95374.1| (U75349) putative permease BitF [Brachyspira hyod... 78 1e-13
pir||F75124 abc transporter integral membrane protein PAB0543 - ... 78 1e-13
gb|AAK41272.1| Sugar ABC transporter [Sulfolobus solfataricus] 76 4e-13
pir||T44986 probable sulfate/thiosulfate transport protein [impo... 76 4e-13
pir||B70040 molybdenum transport permease homolog yvgM - Bacillu... 76 5e-13
pir||H64049 afuB protein homolog - Haemophilus influenzae (strai... 75 7e-13
gb|AAB67296.1| (U59485) AttB [Agrobacterium tumefaciens] 75 7e-13
sp|Q57341|AFUB_HAEIN PUTATIVE FERRIC TRANSPORT SYSTEM PERMEASE P... 75 7e-13
pir||B82310 sulfate ABC transporter, permease protein VC0540 [im... 75 9e-13
pir||H82428 iron(III) ABC transporter, permease protein VCA0686 ... 75 9e-13
pir||T35800 probable polyamine ABC-transporter integral membrane... 74 2e-12
sp|Q53683|YOE1_STRAT HYPOTHETICAL PROTEIN IN OLED 5'REGION (ORF1... 72 6e-12
pir||F71934 molybdate ABC transporter, permease - Helicobacter p... 72 6e-12
gi|10955067 agtD [Agrobacterium tumefaciens] >gi|6689867|gb|AAF2... 72 6e-12
pir||B64579 molybdenum ABC transporter, permease protein - Helic... 72 7e-12
pir||E72543 probable ABC transporter permease protein APE1633 - ... 72 7e-12
pir||G83620 probable permease of ABC transporter PA0204 [importe... 72 7e-12
gb|AAG19354.1| (AE005030) iron transporter-like protein; SfuB [H... 71 1e-11
pir||F72555 probable molybdenum transport system permease protei... 71 2e-11
pir||A72786 probable transport system permease protein APE0270 -... 70 2e-11
pir||B72279 hypothetical protein TM1233 - Thermotoga maritima (s... 70 3e-11
pir||A83608 polyamine transport protein PotI PA0304 [imported] -... 70 3e-11
sp|P71338|HITB_HAEIN IRON(III)-TRANSPORT SYSTEM PERMEASE PROTEIN... 69 4e-11
dbj|BAB07047.1| (AP001518) molybdenum transport system (permease... 69 4e-11
dbj|BAB07407.1| (AP001519) sugar transport system (permease) [Ba... 69 4e-11
pir||F83194 polyamine transport protein PotC PA3609 [imported] -... 69 5e-11
pir||E83060 iron (III)-transport system permease HitB PA4688 [im... 69 6e-11
>pir||F75203 anion transport system permease protein PAB0102 - Pyrococcus abyssi
(strain Orsay) >gi|5457586|emb|CAB49077.1| (AJ248283)
ANION TRANSPORT SYSTEM PERMEASE PROTEIN [Pyrococcus
abyssi]
Length = 248
Score = 475 bits (1210), Expect = e-133
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MGGRDYTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTA 60
MGGRDYTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTA
Sbjct: 1 MGGRDYTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTA 60
Query: 61 TATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILDSY 120
TATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILDSY
Sbjct: 61 TATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILDSY 120
Query: 121 KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASG 180
KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASG
Sbjct: 121 KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASG 180
Query: 181 AIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLR 240
AIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLR
Sbjct: 181 AIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLR 240
Query: 241 WLIGKAKS 248
WLIGKAKS
Sbjct: 241 WLIGKAKS 248
>pir||H71236 probable transport system protein - Pyrococcus horikoshii
>gi|3256540|dbj|BAA29223.1| (AP000001) 248aa long
hypothetical transport system protein [Pyrococcus
horikoshii]
Length = 248
Score = 431 bits (1096), Expect = e-120
Identities = 217/247 (87%), Positives = 232/247 (93%)
Query: 1 MGGRDYTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTA 60
M GRDY LY FAALGSFL+VYI LPI+ IF KQALDF MLVKT+HDPLV+EALRNSLLTA
Sbjct: 1 MMGRDYALYFFAALGSFLVVYIVLPIVTIFAKQALDFEMLVKTVHDPLVLEALRNSLLTA 60
Query: 61 TATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILDSY 120
TATALISL FGVPLGY+LARKDFRGK+ VQAIIDVP+VIPHSVVGIMLLVTFSNAILDSY
Sbjct: 61 TATALISLFFGVPLGYILARKDFRGKNFVQAIIDVPVVIPHSVVGIMLLVTFSNAILDSY 120
Query: 121 KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASG 180
KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGAS++RTFFSISLP+ALPSIASG
Sbjct: 121 KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASRIRTFFSISLPMALPSIASG 180
Query: 181 AIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLR 240
IMAWAR +SEVGAILIVAYYPKTAQ+LVMEYFNNYGLRASRPISV+LM ISL IFV LR
Sbjct: 181 GIMAWARSMSEVGAILIVAYYPKTAQILVMEYFNNYGLRASRPISVMLMLISLSIFVFLR 240
Query: 241 WLIGKAK 247
WLIG+ +
Sbjct: 241 WLIGRVR 247
>gi|11497713 sulfate ABC transporter, permease protein (cysT) [Archaeoglobus
fulgidus] >gi|7442799|pir||E69261 sulfate ABC
transporter, permease protein (cysT) homolog -
Archaeoglobus fulgidus >gi|2650555|gb|AAB91136.1|
(AE001100) sulfate ABC transporter, permease protein
(cysT) [Archaeoglobus fulgidus]
Length = 261
Score = 231 bits (583), Expect = 6e-60
Identities = 112/246 (45%), Positives = 167/246 (67%), Gaps = 10/246 (4%)
Query: 10 LFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLL 69
L A L S +++++ LP+ T Q +F +K DP V + + + A + LI+++
Sbjct: 8 LLALLSSIILLFVLLPVAATVTLQLFNFDEFLKAASDPAVWKVVLTTYYAALISTLIAVI 67
Query: 70 FGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA----------ILDS 119
FG PL Y+LARK F GKS+V+ I+D+P+VIPH+V GI LLV F ++ +D+
Sbjct: 68 FGTPLAYILARKSFPGKSVVEGIVDLPVVIPHTVAGIALLVVFGSSGLIGSFSPLKFVDA 127
Query: 120 YKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIAS 179
GI+ AMLFVS P IN A++GF +VD +LEHVARTLG+S LR FF++SLP+++ I +
Sbjct: 128 LPGIVVAMLFVSVPIYINQAKEGFASVDVRLEHVARTLGSSPLRVFFTVSLPLSVRHIVA 187
Query: 180 GAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVL 239
GAIM+WARGISE GA++++AYYP A L+ E + + GL A+ P++ IL+ +SL +FV L
Sbjct: 188 GAIMSWARGISEFGAVVVIAYYPMIAPTLIYERYLSEGLSAAMPVAAILILLSLAVFVAL 247
Query: 240 RWLIGK 245
R ++G+
Sbjct: 248 RIIVGR 253
>pir||G64470 sulfate/thiosulfate transport protein homolog - Methanococcus
jannaschii >gi|1592012|gb|AAB99376.1| (U67576) sulfate
transport system permease protein (cysT) [Methanococcus
jannaschii]
Length = 249
Score = 222 bits (560), Expect = 3e-57
Identities = 115/232 (49%), Positives = 165/232 (70%), Gaps = 14/232 (6%)
Query: 18 LIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLGYV 77
+ ++I LPII + + D L+ D VIEA + +LL LI+L+FG+P GY+
Sbjct: 15 IFLFIFLPIIYMLSNPG-DLNQLL----DKEVIEAFKTTLLAGAVATLIALIFGIPTGYI 69
Query: 78 LARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL--------VTF-SNAILDSYKGIIAAML 128
LAR DF+ KS V+A++D+P+ IPHSV+GI++L + F ++D++ GI+ L
Sbjct: 70 LARYDFKFKSFVEAVLDLPMAIPHSVIGIIILSFIYGIDIINFIGRYVVDNFWGIVTVYL 129
Query: 129 FVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARG 188
FV PF +NS RDGFL+VDE++E+V+RTLGASK+RTFF ISLP+ +I SG I+++ARG
Sbjct: 130 FVGIPFMVNSIRDGFLSVDEEIEYVSRTLGASKIRTFFEISLPLIKNNIISGIILSFARG 189
Query: 189 ISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLR 240
ISEVGAILI+AYYPKT +L+ E F ++GL AS+PISV ++ IS+ +F +LR
Sbjct: 190 ISEVGAILIIAYYPKTVPILIYERFMSFGLDASKPISVGMILISIALFALLR 241
>gb|AAG19864.1| (AE005071) sulfate transport system permease protein; CysT2
[Halobacterium sp. NRC-1]
Length = 269
Score = 148 bits (370), Expect = 6e-35
Identities = 88/244 (36%), Positives = 137/244 (56%), Gaps = 19/244 (7%)
Query: 9 YLFAALGSFLIVYIALPIIVIFTKQ-ALDFRMLVKTIHDPLVIEALRNSLLTATATALIS 67
+L ALG+ L+ Y+ +P + A D + + P A+R SL TATA +++
Sbjct: 15 WLPVALGAVLVAYLVVPFVAFLAHTGAAD---IGSQLTAPDARAAIRTSLATATAATVLA 71
Query: 68 LLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN------------- 114
+FGVPL Y LAR F GK LV ++ +P+V+P V G MLL
Sbjct: 72 TVFGVPLAYTLARATFPGKRLVNGLVVLPLVVPPLVGGTMLLTVVGRFTPLGAWAAAAGV 131
Query: 115 AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIAL 174
+ +S G++ A FV+APF + +AR GF VD + E AR+LG L TF+++S+P+A
Sbjct: 132 PLTNSAIGVVLAQTFVAAPFLVVAARSGFDGVDPRFEDAARSLGRGPLATFWTVSIPLAR 191
Query: 175 PSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLG 234
P+I +G ++ +AR + E GA ++VA P+T + + F + G+ A P++V L+ I+L
Sbjct: 192 PAILAGIVLTFARALGEFGATMMVATTPRTVPIRIWIAFRSDGIDAVVPLAVALLVITL- 250
Query: 235 IFVV 238
FVV
Sbjct: 251 -FVV 253
>gb|AAD47601.1|AF146563_1 (AF146563) ABC transporter permease [Methanococcus maripaludis]
Length = 121
Score = 144 bits (360), Expect = 9e-34
Identities = 68/114 (59%), Positives = 95/114 (82%)
Query: 127 MLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWA 186
ML+V P+ +NS RDGFL V+E+LE+V+RTLGASK++TFF+ISLP+ ++ SG+I+ +A
Sbjct: 1 MLYVGLPYMVNSGRDGFLMVNEELENVSRTLGASKIKTFFNISLPLIKNNLVSGSILTFA 60
Query: 187 RGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLR 240
RGISEVGAILIVAY+PKT VL+++ FN YGL +S+PISVI++ +S+ +F V R
Sbjct: 61 RGISEVGAILIVAYFPKTTPVLILDRFNEYGLSSSKPISVIMIVLSIVLFSVFR 114
>pir||T45007 probable ABC-transport protein [imported] - Haloferax volcanii
>gi|4775469|emb|CAB42543.1| (AJ238878) putative
ABC-transporter, subunit [Haloferax volcanii]
Length = 269
Score = 141 bits (352), Expect = 8e-33
Identities = 79/238 (33%), Positives = 140/238 (58%), Gaps = 11/238 (4%)
Query: 14 LGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVP 73
L L++Y LPI + Q+ L + + +V+ A NS++ AT + L+++ FGVP
Sbjct: 28 LAGVLLLYYLLPIGALVFAQSP--ASLATDVTNEVVLTAATNSVVAATLSTLVAVAFGVP 85
Query: 74 LGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILD---------SYKGII 124
L Y L+R FRG+ ++ A++ +P+V+P V G++LL A L S G++
Sbjct: 86 LAYWLSRTSFRGRDVILALVMLPLVLPPVVSGMLLLRLVGPAGLGQLTSVPLTRSLFGVV 145
Query: 125 AAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMA 184
A +V++PF + +A+ F VD +LE AR+LG ++ + ++LP+A I +G +
Sbjct: 146 LAQTYVASPFLVVTAKTAFDGVDRQLEAAARSLGEDRVGSVRRVTLPLAKQGILAGVTLT 205
Query: 185 WARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLRWL 242
+AR I E GA L++AYYP+T V + + + GL A+ P++++L+GI++G +++ L
Sbjct: 206 FARAIGEFGATLMLAYYPRTLPVQIWVSYLSTGLDAAFPVALVLVGIAVGAILLVHAL 263
>pir||T36640 probable ABC-type transport system membrane protein - Streptomyces
coelicolor >gi|5019355|emb|CAB44408.1| (AL078610)
putative ABC transporter membrane subunit [Streptomyces
coelicolor A3(2)]
Length = 283
Score = 127 bits (317), Expect = 1e-28
Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 22/256 (8%)
Query: 2 GGRDYTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTAT 61
GG L + A +G + ++ LP++ + + + + + + V +ALR SL+ AT
Sbjct: 26 GGAPLPLLVPALIG---LAFLVLPLVALLIRAP--WASMPELLTSTEVWQALRLSLICAT 80
Query: 62 ATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFS-NAI---- 116
A ++S++ GVPL ++LAR +F G+ LV+A++ +P+V+P V G+ LL+ N +
Sbjct: 81 AATVVSMVIGVPLAWLLARVEFPGRGLVRALVTLPLVLPPVVGGVALLMALGRNGVVGQW 140
Query: 117 LDSY---------KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFS 167
LDS+ G+I A FV+ PF + S A D + E A TLGAS+ F
Sbjct: 141 LDSWFGITLPFTTTGVILAEAFVAMPFLVISVEGTLRAADPRYEEAATTLGASRFTAFRR 200
Query: 168 ISLPIALPSIASGAIMAWARGISEVGA-ILIVAYYPKTAQVLVMEYF--NNYGLRASRPI 224
++LP+ P IA+GA++AWAR + E GA I +P Q + + + A+ +
Sbjct: 201 VTLPLIAPGIAAGAVLAWARALGEFGATITFAGNFPGRTQTMPLAVYLALQSDPEAAVAL 260
Query: 225 SVILMGISLGIFVVLR 240
S++L+ +S+ + LR
Sbjct: 261 SLVLLAVSVAVLAGLR 276
>pir||C75613 probable molybdenum ABC transporter, permease protein - Deinococcus
radiodurans (strain R1)
>gi|6460495|gb|AAF12201.1|AE001862_27 (AE001862)
molybdenum ABC transporter, permease protein, putative
[Deinococcus radiodurans]
Length = 266
Score = 125 bits (311), Expect = 5e-28
Identities = 79/248 (31%), Positives = 134/248 (53%), Gaps = 18/248 (7%)
Query: 14 LGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVP 73
LG L +++ +P++V+ T+ + V +ALR SLLT T L+++ P
Sbjct: 15 LGGALTLFLVVPVLVLLTRGLT--ASFWPALASRAVGDALRVSLLTTGITLLLTVTLVTP 72
Query: 74 LGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDSY 120
+ ++LAR DF GK +++ ++D+PIV+P V G+ LL+TF + S
Sbjct: 73 VAWLLARFDFPGKPVLETLLDLPIVLPPVVAGVGLLLTFGRGGLLGPALELAGIQLAFST 132
Query: 121 KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASG 180
++ A LFVSAPF + +AR GF AV+ E ART GAS + F I+ P+A P + G
Sbjct: 133 AAVVLAQLFVSAPFYLRTARAGFQAVNRDAEDAARTDGASDGQVFRLITWPLAFPFLLEG 192
Query: 181 AIMAWARGISEVGAILIVA--YYPKTAQVLVMEYFN-NYGLRASRPISVILMGISLGIFV 237
++AWAR + E GA ++ A +T V + Y L + +S +++ ++ G+ +
Sbjct: 193 LVLAWARALGEFGATILFAGSLQGQTRTVTLAIYAALESDLAPALVLSAVMVLVAFGLLL 252
Query: 238 VLRWLIGK 245
++R + G+
Sbjct: 253 LVRSVAGR 260
>sp|Q01895|CYST_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|7442786|pir||S76741 sulfate transport system
permease protein cysT - Synechocystis sp. (strain PCC
6803) >gi|1653742|dbj|BAA18653.1| (D90916) sulfate
transport system permease protein [Synechocystis sp.]
Length = 286
Score = 116 bits (288), Expect = 2e-25
Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 18/244 (7%)
Query: 17 FLIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+L++ + LPI + K A L + P+ I + +TA A L++ + G +
Sbjct: 33 YLLLILVLPIAALLVKSASLGLEGFWQIATTPIAISTYNVTFITALAAGLVNGVMGTLVA 92
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDSYKG 122
+VL R F GK +V A++D+P +P SV G++L +S I S G
Sbjct: 93 WVLVRCQFPGKKIVDAMVDLPFALPTSVAGLVLATLYSQTGWVGRFFAPFGIQIAFSRLG 152
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
+ AM+F+S PF + + + ++E+ E A +LGA++ +TF+ + P +P I +G
Sbjct: 153 VFVAMVFISLPFIVRTLQPVLQELEEEAEEAAWSLGATEFQTFWRVIFPPLIPPILTGIA 212
Query: 183 MAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVV 238
+ ++R + E G+++++A + A VLV E Y A+ I +L+ +SL + ++
Sbjct: 213 LGFSRAVGEYGSVVLIASNIPFKDLIAPVLVFERLEQYDYPAATVIGAVLLSVSLILLLI 272
Query: 239 LRWL 242
+ L
Sbjct: 273 INLL 276
>pir||A82426 molybdenum ABC transporter, permease protein VCA0725 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658145|gb|AAF96624.1| (AE004401) molybdenum ABC
transporter, permease protein [Vibrio cholerae]
Length = 232
Score = 115 bits (285), Expect = 5e-25
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 21/211 (9%)
Query: 52 ALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVT 111
AL SL A L L G+ L +VLAR F GK L+ +++ +P+V+P V+G +LL++
Sbjct: 11 ALALSLKVAGYATLWLLPIGIVLAWVLARTSFIGKGLIDSLVHLPLVLPPVVIGYLLLIS 70
Query: 112 --------------FSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTL 157
F + S++G + A + ++ P + S R +VD+KLE ARTL
Sbjct: 71 MGRQGFIGQWLYQVFGLSFSFSWRGAVLACMVIALPLMVRSIRLSLESVDQKLEQAARTL 130
Query: 158 GASKLRTFFSISLPIALPSIASGAIMAWARGISEVGA-ILIVAYYPKTAQVLVMEYFN-- 214
GAS +R FF+I+LP+ LP I +G ++A+AR + E GA I V+ P Q + + F
Sbjct: 131 GASPMRVFFTITLPLTLPGILTGVMLAFARSLGEFGATISFVSNIPGETQTIPLAMFTFL 190
Query: 215 ---NYGLRASRPISVILMGISLGIFVVLRWL 242
+ A+R + I + I+LG + WL
Sbjct: 191 ETPGSEMEAAR-LCAISIAIALGSLFISEWL 220
>gi|11466435 probable transport protein [Mesostigma viride]
>gi|7259578|gb|AAF43879.1|AF166114_91 (AF166114)
probable transport protein [Mesostigma viride]
Length = 269
Score = 115 bits (284), Expect = 7e-25
Identities = 66/239 (27%), Positives = 125/239 (51%), Gaps = 18/239 (7%)
Query: 17 FLIVYIALPIIVIFTKQALD-FRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+L+ + LPI+ + ++ + + F +P I A +L A ++++ +FG+ +
Sbjct: 17 YLLFMLILPILALLSRASQELFSNFWSIAMEPAAIYAYSITLSMALIASIVNGIFGIFIA 76
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDSYKG 122
++L R +F GK +V A ID+P +P SV G+ L +S ++ + G
Sbjct: 77 WILVRYNFPGKRIVDAAIDLPFALPTSVAGLTLATVYSEKGWIGHFLQSLSIKVVFTKLG 136
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
+ AM+FVS PF + + + ++++LE A +LGAS TF+ + P +PS+ +G
Sbjct: 137 VGVAMIFVSFPFVVRTLQPVLQDIEKELEEAAWSLGASSWTTFWKVIFPSLIPSLLTGIA 196
Query: 183 MAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFV 237
+A++R + E G+++I+A + TA VL+ + Y + I +++ ISL I V
Sbjct: 197 LAFSRAVGEYGSVVIIASNIPFKDLTAPVLIFQKLEQYDYTGATVIGTVILSISLFILV 255
>pir||D69223 anion transport system permease protein - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622018|gb|AAB85419.1| (AE000867) anion transport
system permease protein [Methanobacterium
thermoautotrophicum]
Length = 269
Score = 114 bits (283), Expect = 9e-25
Identities = 71/239 (29%), Positives = 130/239 (53%), Gaps = 24/239 (10%)
Query: 17 FLIVYIALPIIVIFTKQALDF-RMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
F ++++A I+ + + + ++ + +I +++ SLLT+T T LI +L + +
Sbjct: 16 FAVIFVAAFFIICISLWTVSSPQSILDSFRSADMIHSVKLSLLTSTITTLIVMLSALLIA 75
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA------------ILDSYKGI 123
Y L+ FRGKS+V+ ++D+PI +P ++GIMLL+ N I+ + G+
Sbjct: 76 YSLSEDSFRGKSIVKTVLDIPIALPEILIGIMLLIFLGNTPLNYMMDGLGIQIVFTDLGV 135
Query: 124 IAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIM 183
I A FVS P+ + F +D +L+ V+R+LG ++ TF +I +P++ I + I+
Sbjct: 136 ICAQFFVSLPYTVRICYSTFCNIDRRLKFVSRSLGYTEFETFRNIMIPLSRDGILAATII 195
Query: 184 AWARGISEVGAILIVA--YYPKTAQVLVMEYFN-NYGLRASRPISVILMGISLGIFVVL 239
++R I GA+LIVA Y KT + + Y N +YG + M ++ GIF+++
Sbjct: 196 TFSRCIGCFGAVLIVAGGTYQKTDTLPISLYLNLSYG--------NVEMAVASGIFLMI 246
>pir||B70683 probable cysT - Mycobacterium tuberculosis (strain H37RV)
>gi|1655661|emb|CAB03727.1| (Z81368) cysT [Mycobacterium
tuberculosis]
Length = 283
Score = 113 bits (279), Expect = 3e-24
Identities = 71/235 (30%), Positives = 125/235 (52%), Gaps = 11/235 (4%)
Query: 17 FLIVYIALPIIVIFTKQALD-FRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+L V + LP+ I + A +R + +E+ R +L +TA +I+L+FG+ +
Sbjct: 35 WLSVIVLLPLAAIVWQAAGGGWRAFWLAVSSHAAMESFRVTLTISTAVTVINLVFGLLIA 94
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA------ILDSYKGIIAAMLF 129
+VL R DF GK +V AIID+P +P V +++L + N + G+ A+ F
Sbjct: 95 WVLVRDDFAGKRIVDAIIDLPFALPTIVASLVMLALYGNNSPVGLHFQHTATGVGVALAF 154
Query: 130 VSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGI 189
V+ PF + + + L +D + E A +LGA+ + F S+ LP P++ SGA +A++R I
Sbjct: 155 VTLPFVVRAVQPVLLEIDRETEEAAASLGANGAKIFTSVVLPSLTPALLSGAGLAFSRAI 214
Query: 190 SEVGAILIV--AYYPKT--AQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLR 240
E G+++++ A KT + + N + ISV+L+ IS + ++LR
Sbjct: 215 GEFGSVVLIGGAVPGKTEVSSQWIRTLIENDDRTGAAAISVVLLSISFIVLLILR 269
>gi|11467877 probable transport protein [Nephroselmis olivacea]
>gi|5880806|gb|AAD54899.1|AF137379_122 (AF137379)
probable transport protein [Nephroselmis olivacea]
Length = 284
Score = 111 bits (275), Expect = 8e-24
Identities = 65/244 (26%), Positives = 126/244 (51%), Gaps = 18/244 (7%)
Query: 17 FLIVYIALPIIVIFTKQALD-FRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+++V + LPI + K + + V P+ + A +L +A AL++ +FG+ +
Sbjct: 32 YMLVSLILPIGALLQKSSQESVSEFVSIATAPVAMSAYAVTLSSALIAALLNGVFGLLIA 91
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDSYKG 122
+VL R +F G+ L+ A +D+P +P SV G+ L +S+ + + G
Sbjct: 92 WVLVRYEFPGRRLLDAAVDLPFALPTSVAGLTLATVYSDQGWIGTWLSSLNIQVAFTRLG 151
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
++ AMLFVS PF + + + ++ +LE A +LGAS TF + P +P++ +G
Sbjct: 152 VMLAMLFVSFPFVVRTLQPVLQDMERELEEAAWSLGASPFNTFLRVLCPPLMPAMMTGIA 211
Query: 183 MAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVV 238
+A++R + E G+++IV+ + A VL+ + Y + I +++ ISL + +
Sbjct: 212 LAFSRAVGEYGSVVIVSGNIPFQDLIAPVLIFQRLEQYDYSGATVIGTVVLLISLTLLLA 271
Query: 239 LRWL 242
+ W+
Sbjct: 272 INWI 275
>gi|11466750 ORF288 [Marchantia polymorpha] >gi|126795|sp|P26246|CYST_MARPO
PROBABLE SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|81344|pir||A05062 probable mbpY protein - liverwort
(Marchantia polymorpha) chloroplast
>gi|11721|emb|CAA28132.1| (X04465) ORF288 [Marchantia
polymorpha]
Length = 288
Score = 111 bits (274), Expect = 1e-23
Identities = 74/247 (29%), Positives = 131/247 (52%), Gaps = 23/247 (9%)
Query: 6 YTLYLFAAL--GSFLIVYIALPIIVIFTK-QALDFRMLVKTIHDPLVIEALRNSLLTATA 62
+ L L AL G+F++ ALPI + K + + +L++T +P+V+ A + LTA
Sbjct: 26 FELVLACALHYGTFIL---ALPIFFLLYKTKQQPWNILLQTALEPVVLSAYGFTFLTALL 82
Query: 63 TALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN-------- 114
+I+ +FG+ L +VL R +F GK L+ A +D+P +P SV G+ L+ F++
Sbjct: 83 ATIINAIFGLILAWVLVRYEFPGKKLLDATVDLPFALPTSVGGLTLMTVFNDKGWIKPIC 142
Query: 115 -----AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSIS 169
I+ + G++ AM+FVS PF + + + ++E LE A LGAS TF+ I
Sbjct: 143 SWLNIKIVFNPIGVLLAMIFVSLPFVVRTIQPVLQNMEEDLEEAAWCLGASPWTTFWHIL 202
Query: 170 LPIALPSIASGAIMAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPIS 225
P PS+ +G + ++R + E G+I+++A VL+ + Y +++ I+
Sbjct: 203 FPPLTPSLLTGTTLGFSRALGEYGSIVLIASNIPMKDLVISVLLFQKLEQYDYKSATIIA 262
Query: 226 VILMGIS 232
++ IS
Sbjct: 263 SFVLIIS 269
>sp|P27367|CYST_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|280207|pir||C43670 integral membrane protein cysT -
Synechococcus sp >gi|154508|gb|AAA73044.1| (M65247)
integral membrane polypeptide of the sulfate permease
[Synechococcus PCC7942]
Length = 278
Score = 110 bits (273), Expect = 1e-23
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 18/244 (7%)
Query: 17 FLIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+L + + +PII +F K A L + + P+ + A + + A A ++ +FGV +
Sbjct: 26 YLTLILFIPIIALFLKSASLPLGRIWELATQPVAVAAYEVTFGLSLAAAALNGVFGVIIA 85
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDSYKG 122
+VL R DF GK L + ID+P +P +V G+ L +S+ I + G
Sbjct: 86 WVLTRYDFPGKKLFDSFIDLPFALPTAVAGLTLATVYSDKGWIGQFIAPFGVQIAFTRWG 145
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
++ AM+F+S PF + + L ++ + E A +LGAS TF+ + LP LP + +G
Sbjct: 146 VLLAMVFISLPFVVRTVEPLLLELEVEAEEAAASLGASPSETFWRVILPPILPGVLAGVA 205
Query: 183 MAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVV 238
++R + E G+++I++ + A VL+ E Y + I +L+ SL I V
Sbjct: 206 QGFSRAVGEFGSVVIISGNLPFDDLIAPVLIFERLEQYDYAGATVIGSVLLLFSLVILFV 265
Query: 239 LRWL 242
+ L
Sbjct: 266 INAL 269
>emb|CAC12179.1| (AL445066) ABC transporter permease related protein [Thermoplasma
acidophilum]
Length = 266
Score = 107 bits (264), Expect = 2e-22
Identities = 75/264 (28%), Positives = 135/264 (50%), Gaps = 30/264 (11%)
Query: 1 MGGRDYTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPL--VIEALRNSLL 58
M R +YLF F I + L ++++ +AL + L + I D +I ++ + +
Sbjct: 1 MKSRGRLIYLF-----FPIFVVYLLVLIVPLVRALTYSSLSEIITDLRSGIIPSIEYTYI 55
Query: 59 TATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAIL- 117
A++++L +P YV++R V +++++PI+IPH+VVGI++L+TF ++
Sbjct: 56 VCAFVAVLAVLAALPYAYVMSRHRSTFFKAVDSVVEIPIMIPHTVVGIIMLLTFEPSMPL 115
Query: 118 --------------DSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLR 163
D+ +I + F+S+ ++I + E VA+TLG ++
Sbjct: 116 GHILSKYIPGYSFDDTLFAVIITLFFLSSAYSIREVGVSYQRTVVDYEDVAKTLGLTEGM 175
Query: 164 TFFSISLPIALPSIASGAIMAWARGISEVGAILIVAYY-----PKTAQVLVMEYFNNYGL 218
+F +S+ + S+ G +++WAR +SEVGAILIVAYY K A V + + +GL
Sbjct: 176 SFLVVSMRLLARSMMKGFLLSWARSVSEVGAILIVAYYIFPSFIKLAGVFIYSQWLGFGL 235
Query: 219 ---RASRPISVILMGISLGIFVVL 239
AS I ++ I G+F V+
Sbjct: 236 YPAAASSAILIVTGIIVTGVFRVV 259
>pir||B83610 sulfate transport protein CysT PA0282 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946125|gb|AAG03671.1|AE004466_5 (AE004466) sulfate
transport protein CysT [Pseudomonas aeruginosa]
Length = 272
Score = 106 bits (261), Expect = 4e-22
Identities = 68/244 (27%), Positives = 125/244 (50%), Gaps = 18/244 (7%)
Query: 17 FLIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+L + + +P+ +F K L + I P V+ AL+ S TA A A+++ L G L
Sbjct: 22 YLSLLVLIPLGAMFLKTTQLSWEQFWAIISAPRVLAALKLSFGTALAAAVLNGLIGTLLA 81
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDSYKG 122
+VL R +F G+ ++ A+ID+P +P +V GI L ++ A I + G
Sbjct: 82 WVLVRYEFPGRKIIDAMIDLPFALPTAVAGIALTALYAPAGLVGQFASDLGFKIAYTPLG 141
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
I A+ FV+ PF + + + + +++E A LGA L+ F I +P LP+ +G
Sbjct: 142 ITLALTFVTLPFVVRTVQPVLADIPKEVEEAAACLGARPLQVFRHILVPALLPAWLTGFA 201
Query: 183 MAWARGISEVGAILIVA-YYPKTAQV---LVMEYFNNYGLRASRPISVILMGISLGIFVV 238
+A+ARG+ E G+++ +A P ++ L+M + Y + I V+++ +S + ++
Sbjct: 202 LAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYTGATAIGVLMLVVSFILLLL 261
Query: 239 LRWL 242
+ L
Sbjct: 262 INLL 265
>pir||A70683 probable cysW - Mycobacterium tuberculosis (strain H37RV)
>gi|1655662|emb|CAB03728.1| (Z81368) cysW [Mycobacterium
tuberculosis]
Length = 272
Score = 105 bits (259), Expect = 6e-22
Identities = 70/243 (28%), Positives = 117/243 (47%), Gaps = 17/243 (6%)
Query: 13 ALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGV 72
ALG ++ I ++++ F I P I AL SLL ++++FGV
Sbjct: 15 ALGYVFVLLIVPVALILWRTFEPGFGQFYAWISTPAAISALNLSLLVVAIVVPLNVIFGV 74
Query: 73 PLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDS 119
VLAR FRGK ++QAIID+P + +VG+ L++ + +A I+
Sbjct: 75 TTALVLARNRFRGKGVLQAIIDLPFAVSPVIVGVSLILLWGSAGALGFVEQDLGFKIIFG 134
Query: 120 YKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIAS 179
GI+ +FV+ PF + + E A TLG+ +TF+ I+LP +
Sbjct: 135 LPGIVLGSMFVTCPFVVREVEPVLHELGTDQEQAAATLGSGWWQTFWRITLPSIRWGLTY 194
Query: 180 GAIMAWARGISEVGAILIV-AYYPKTAQVLVMEYFNNYGLRA---SRPISVILMGISLGI 235
G ++ AR + E GA++IV + P T+Q L + + Y A + +S +LM +S+ +
Sbjct: 195 GIVLTVARTLGEYGAVIIVSSNLPGTSQTLTLLVSDRYHRGAEYGAYALSTLLMAVSVVV 254
Query: 236 FVV 238
+V
Sbjct: 255 LIV 257
>dbj|BAB06847.1| (AP001517) sulfate ABC transporter (permease) [Bacillus halodurans]
Length = 279
Score = 105 bits (259), Expect = 6e-22
Identities = 63/246 (25%), Positives = 125/246 (50%), Gaps = 21/246 (8%)
Query: 17 FLIVYIALPIIVIFTK-QALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+L + + LP+ ++F ++ ++ + I +P V+ + R S A A I+ +FG+ +
Sbjct: 26 YLGILVLLPLSMVFINTSSMGWQAFWQAITEPRVLASYRLSFGAAIIAASINAVFGLLIA 85
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFS-NAILDSYK------------G 122
+VL R F GK ++ ++D+P +P +V GI L ++ N + Y G
Sbjct: 86 WVLVRYHFPGKRIIDGLVDLPFALPTAVAGIALTTLYTTNGWIGQYLEVFGIRIAFTPLG 145
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
+I A+ F+ PF + + ++++LE + LGA++L+TF I P LP++ +G
Sbjct: 146 VIVALTFIGLPFVVRMVQPVLQGIEKELEEASACLGANRLQTFSKIIFPTVLPALLTGFA 205
Query: 183 MAWARGISEVGAILIVA----YYPKTAQVLVM---EYFNNYGLRASRPISVILMGISLGI 235
+A+AR + E G+++ ++ + +L+M E F+ G A + +I+ L
Sbjct: 206 LAFARALGEYGSVVFISGNLPMQTEITPLLIMTKLEQFDYAGATALAAVMLIISFFMLLF 265
Query: 236 FVVLRW 241
+L+W
Sbjct: 266 INILQW 271
>emb|CAB53107.1| (AJ245645) sulfate transport permease protein [Prototheca
wickerhamii]
Length = 255
Score = 104 bits (257), Expect = 1e-21
Identities = 63/244 (25%), Positives = 122/244 (49%), Gaps = 18/244 (7%)
Query: 14 LGSFLIVYIALPIIVIFTKQALD-FRMLVKTIHDPLVIEALRNSLLTATATALISLLFGV 72
LG+ L LP+ +F+ + ++ +++ DP+ I A ++ A AL + +FG
Sbjct: 2 LGNHLFFIPVLPLFALFSLILKNSWKDILEKAVDPIAICAYGFTIKMALIAALFNSIFGF 61
Query: 73 PLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDS 119
+ +V+ R +F+GK + A +D+P +P SV G+ L + N I+ +
Sbjct: 62 LITWVITRYEFKGKKFIDAAVDLPFALPTSVAGLTLATVYGNQGWVGRFLKMGNLQIIYT 121
Query: 120 YKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIAS 179
G++ AM+FVS PF I S + +D LE A LGAS +TF + P +P++ +
Sbjct: 122 KFGVLLAMIFVSFPFVIRSLQPVLQGLDHGLEEAAWCLGASSFQTFLRVIFPTLVPALVT 181
Query: 180 GAIMAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGI 235
G ++++R + E G++++++ VL+ + Y + I +++ I+L I
Sbjct: 182 GFTLSFSRALGEFGSVVMISSNLPLDDLVTSVLIYQSLEQYDYFGASVIGAVILMIALLI 241
Query: 236 FVVL 239
++
Sbjct: 242 IFLI 245
>pir||S31095 cysT protein - Synechocystis sp. (PCC 6803) (fragment)
>gi|49120|emb|CAA48111.1| (X67911) cysT [Synechocystis
sp.]
Length = 235
Score = 102 bits (253), Expect = 3e-21
Identities = 55/197 (27%), Positives = 103/197 (51%), Gaps = 14/197 (7%)
Query: 17 FLIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+L++ + LPI + K A L + P+ I + +TA A L++ + G +
Sbjct: 33 YLLLILVLPIAALLVKSASLGLEGFWQIATTPIAISTYNVTFITALAAGLVNGVMGTLVA 92
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDSYKG 122
+VL R F GK +V A++D+P +P SV G++L +S I S G
Sbjct: 93 WVLVRCQFPGKKIVDAMVDLPFALPTSVAGLVLATLYSQTGWVGRFFAPFGIQIAFSRLG 152
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
+ AM+F+S PF + + + ++E+ E A +LGA++ +TF+ + P +P I +G
Sbjct: 153 VFVAMVFISLPFIVRTLQPVLQELEEEAEEAAWSLGATEFQTFWRVIFPPLIPPILTGIA 212
Query: 183 MAWARGISEVGAILIVA 199
+ ++R + E G+++++A
Sbjct: 213 LGFSRAVGEYGSVVLIA 229
>sp|P09834|MODB_ECOLI MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
>gi|504499|gb|AAB00836.1| (L34009) hydrophobic
membrane-bound protein [Escherichia coli]
>gi|973215|gb|AAB60172.1| (U27192) ModB [Escherichia
coli] >gi|1147818|gb|AAB06894.1| (U07867) part of a
molybdenum periplasmic binding protein dependent
transport system [Escherichia coli]
>gi|1586649|prf||2204295C modB gene [Escherichia coli]
Length = 229
Score = 102 bits (252), Expect = 4e-21
Identities = 64/211 (30%), Positives = 108/211 (50%), Gaps = 19/211 (9%)
Query: 51 EALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLV 110
+A+ SL ++ L SL FG+ ++L R F GK+L+ +++ +P+V+P VVG +LLV
Sbjct: 9 QAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCSFPGKALLDSVLHLPLVLPPVVVGYLLLV 68
Query: 111 T--------------FSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVART 156
+ F S++G + A +S P + + R VD KLE ART
Sbjct: 69 SMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAART 128
Query: 157 LGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGA-ILIVAYYPKTAQVLVMEYFNN 215
LGA + R FF+I+LP+ LP I G ++A+AR + E GA I V+ P + + +
Sbjct: 129 LGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTL 188
Query: 216 Y----GLRASRPISVILMGISLGIFVVLRWL 242
G + + +I + +++ ++ WL
Sbjct: 189 IQTPGGESGAARLCIISIALAMISLLISEWL 219
>sp|P45322|MODB_HAEIN MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
>gi|1075026|pir||A64137 molybdenum transport protein -
Haemophilus influenzae (strain Rd KW20)
>gi|1574545|gb|AAC23338.1| (U32842) molybdenum ABC
transporter, permease protein (modB) [Haemophilus
influenzae Rd]
Length = 229
Score = 102 bits (252), Expect = 4e-21
Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 14/161 (8%)
Query: 50 IEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL 109
I A+ SL A ++ L SL + + ++LARK+F GKSL+ +I +P+V+P V+G +LL
Sbjct: 3 ISAINLSLSVAVSSMLWSLPLAIFVAWLLARKNFYGKSLITGVIHLPLVLPPVVIGYLLL 62
Query: 110 VTFS-NAILDSY-------------KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVAR 155
V N + Y KG + + V+ P + + R +D KLE A+
Sbjct: 63 VAMGRNGFIGKYLYQWFGLSFGFSWKGAVLSSAVVAFPLVVRAIRLSLENIDIKLEQAAQ 122
Query: 156 TLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAIL 196
TLGAS R FF+I+LP++LP + +G ++ +AR + E GA +
Sbjct: 123 TLGASAWRVFFTITLPLSLPGVLAGLVLGFARSLGEFGATI 163
>pir||BVECHJ molybdenum transport protein modB - Escherichia coli
>gi|1651349|dbj|BAA35428.1| (D90715) Molybdenum
transport system permease protein ModB. [Escherichia
coli] >gi|1786980|gb|AAC73851.1| (AE000179) molybdate
transport permease protein [Escherichia coli K12]
Length = 229
Score = 102 bits (251), Expect = 5e-21
Identities = 64/211 (30%), Positives = 108/211 (50%), Gaps = 19/211 (9%)
Query: 51 EALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLV 110
+A+ SL ++ L SL FG+ ++L R F GK+L+ +++ +P+V+P VVG +LLV
Sbjct: 9 QAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLV 68
Query: 111 T--------------FSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVART 156
+ F S++G + A +S P + + R VD KLE ART
Sbjct: 69 SMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAART 128
Query: 157 LGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGA-ILIVAYYPKTAQVLVMEYFNN 215
LGA + R FF+I+LP+ LP I G ++A+AR + E GA I V+ P + + +
Sbjct: 129 LGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTL 188
Query: 216 Y----GLRASRPISVILMGISLGIFVVLRWL 242
G + + +I + +++ ++ WL
Sbjct: 189 IQTPGGESGAARLCIISIALAMISLLISEWL 219
>pir||G81875 sulfate ABC transporter, inner membrane protein NMA1098
[similarity] - Neisseria meningitidis (group A strain
Z2491) >gi|7379793|emb|CAB84361.1| (AL162755) putative
sulphate permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 286
Score = 102 bits (251), Expect = 5e-21
Identities = 71/250 (28%), Positives = 128/250 (50%), Gaps = 21/250 (8%)
Query: 8 LYLFAALGSFLIVYIALPIIVIFTKQAL--DFRMLVKTIHDPLVIEALRNSLLTATATAL 65
L + AALG FL++ + +P++ +F +AL + + +K+++DP A++ +L+TA
Sbjct: 19 LLIAAALG-FLLLMLVVPLVAVF-YEALKGGWDLYLKSLNDPEAWSAIKLTLITALIVVP 76
Query: 66 ISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN----------- 114
++ + GV + ++L R DFRGK L+ ++D+P + V G+M ++ F
Sbjct: 77 VNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQ 136
Query: 115 --AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPI 172
I+ + GII A LFV+ PF A + E A LGAS + F+ ++LP
Sbjct: 137 GIQIIFAIPGIILATLFVTFPFVAREIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPN 196
Query: 173 ALPSIASGAIMAWARGISEVGAILIVAYY----PKTAQVLVMEYFNNYGLRASRPISVIL 228
++ G I+ AR + E GA+ +V+ + T +LV ++N Y + +S +L
Sbjct: 197 IKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVL 256
Query: 229 MGISLGIFVV 238
++L V
Sbjct: 257 ALLALATLAV 266
>pir||C81147 sulfate ABC transporter, permease protein NMB0880 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226118|gb|AAF41291.1| (AE002440) sulfate ABC
transporter, permease protein [Neisseria meningitidis
MC58]
Length = 286
Score = 101 bits (250), Expect = 7e-21
Identities = 70/250 (28%), Positives = 128/250 (51%), Gaps = 21/250 (8%)
Query: 8 LYLFAALGSFLIVYIALPIIVIFTKQAL--DFRMLVKTIHDPLVIEALRNSLLTATATAL 65
L + AALG FL++ + +P++ +F +AL + + +K+++DP A++ +L+TA
Sbjct: 19 LLIAAALG-FLLLMLVVPLVAVF-YEALKGGWDLYLKSLNDPEAWSAIKLTLITALIVVP 76
Query: 66 ISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN----------- 114
++ + GV + ++L R DFRGK L+ ++D+P + V G+M ++ F
Sbjct: 77 VNAVLGVAMAWLLTRFDFRGKQLLTTLLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQ 136
Query: 115 --AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPI 172
I+ + GI+ A LFV+ PF A + E A LGAS + F+ ++LP
Sbjct: 137 GIQIIFAIPGIVLATLFVTFPFVAREIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPN 196
Query: 173 ALPSIASGAIMAWARGISEVGAILIVAYY----PKTAQVLVMEYFNNYGLRASRPISVIL 228
++ G I+ AR + E GA+ +V+ + T +LV ++N Y + +S +L
Sbjct: 197 IKWALLYGIILTNARAMGEFGAVSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVL 256
Query: 229 MGISLGIFVV 238
++L V
Sbjct: 257 ALLALATLAV 266
>pir||H83568 probable permease of ABC transporter PA0606 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946480|gb|AAG03995.1|AE004497_2 (AE004497) probable
permease of ABC transporter [Pseudomonas aeruginosa]
Length = 276
Score = 101 bits (249), Expect = 9e-21
Identities = 70/255 (27%), Positives = 123/255 (47%), Gaps = 18/255 (7%)
Query: 9 YLFAALGSFLIVYIALPIIVI------------FTKQALDFRMLVKTIHDPLVIEALRNS 56
Y L +++++ LP++VI + Q R + +L NS
Sbjct: 15 YSLRILCGLVLLFLVLPVLVIVPLSFNSGTFLVYPLQGFSLRWYADFFQSAEWMRSLTNS 74
Query: 57 LLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAI 116
++ A A L++++FG L R +FRGK+LV +++ P+V+P ++G+ + F+
Sbjct: 75 MIVAPAATLLAMVFGTLAAIGLTRGEFRGKALVMSLMISPMVVPVVIIGVASYLFFAPLG 134
Query: 117 L-DSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALP 175
L +SY +I + PF I + + L A +LGA L TFF ++LP+ P
Sbjct: 135 LGNSYLSLIVVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGAPPLTTFFRVTLPLIAP 194
Query: 176 SIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPI---SVILMGIS 232
+ SGA+ A+A EV L +A P+ A L + F+ S I + +L+G S
Sbjct: 195 GVISGALFAFATSFDEVVVTLFLA-GPEQA-TLPRQMFSGIRENLSPTIAAAATLLIGFS 252
Query: 233 LGIFVVLRWLIGKAK 247
+ + + L WL G+++
Sbjct: 253 VLLLLTLEWLRGRSE 267
>sp|P27370|CYSW_SYNP7 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|280208|pir||F43670 integral membrane protein cysW -
Synechococcus sp >gi|154511|gb|AAA73047.1| (M65247)
integral membrane polypeptide of the sulfate permease
[Synechococcus PCC7942]
Length = 286
Score = 99.1 bits (243), Expect = 5e-20
Identities = 71/253 (28%), Positives = 124/253 (48%), Gaps = 23/253 (9%)
Query: 13 ALGSFLIVYIALPIIVIFTKQALD-----FRMLVKTIHDPLVIEALRNSLLTATATALIS 67
AL ++Y+ L II+ A+ +K + D + EA+R +LL + ++
Sbjct: 24 ALIGISLLYVGLIIIIPAANVAVQAFSEGLSGFIKNLGDRNLQEAIRLTLLMGVISVPLN 83
Query: 68 LLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN------------- 114
LFG+ + +ARK F GKSL+ ++ID+P I V G+M+++ +
Sbjct: 84 TLFGLAAAFAIARKQFPGKSLLLSVIDLPFSISPVVAGLMIVLLYGRNGWLGPLLESNDI 143
Query: 115 AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIAL 174
I+ ++ G+ A +FVS PF + E A TLGA+ +TF+ ++LP
Sbjct: 144 KIIFAWPGMALATIFVSMPFVAREVIPNLEEIGTDAEEAASTLGANGWQTFWRVTLPSIK 203
Query: 175 PSIASGAIMAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVILMG 230
S+ G ++ AR + E GA+ +V+ +T + V E + Y S +++L G
Sbjct: 204 WSMLYGVVLTTARALGEFGAVSVVSGSITGKTQTLPLFVEEAYKQYQTTLSYTAALLLGG 263
Query: 231 ISLGIFVVLRWLI 243
ISL + +VL+ L+
Sbjct: 264 ISL-VTLVLKALL 275
>pir||F82694 ABC transporter sulfate permease XF1345 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9106342|gb|AAF84154.1|AE003966_15 (AE003966) ABC
transporter sulfate permease [Xylella fastidiosa]
Length = 286
Score = 98.3 bits (241), Expect = 8e-20
Identities = 62/241 (25%), Positives = 121/241 (49%), Gaps = 18/241 (7%)
Query: 17 FLIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+L + + +P++ +F K + L + L +P V+ AL S +A A + + G +
Sbjct: 30 WLGLIVLIPLVGVFVKASGLGWSGLWNVWMEPRVLSALSVSFGSALVAAAFNAVMGTWVA 89
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN-------AILDSYK------G 122
+V R DF GK + AIID+P +P +V GI L + L +K G
Sbjct: 90 WVFGRYDFPGKRVFDAIIDLPFALPTAVAGIALAALYGPNGWIGRWLELAGFKVAYTPLG 149
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
I+ A++FV PF + + +++LE A +LGA++ +T F + LP P++ +G
Sbjct: 150 IVVALVFVGLPFVVRIVQPVLAEAEKELEEAAASLGANRWQTMFRVVLPTLWPAMLTGFA 209
Query: 183 MAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVV 238
+A+ARG+ E G+++ +A + A +L+ + + I+ +++ +S + ++
Sbjct: 210 LAFARGVGEYGSVIFIAGNLPNATEIAPLLITIRLEEFDYSGATAIAAVMLLLSFTVLLM 269
Query: 239 L 239
+
Sbjct: 270 V 270
>pir||T44855 molybdenum transport transmembrane protein modB [imported] -
Arthrobacter nicotinovorans plasmid pAO1
>gi|2288880|emb|CAA71777.1| (Y10817) transmembrane
protein [Arthrobacter nicotinovorans]
Length = 239
Score = 98.3 bits (241), Expect = 8e-20
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 50 IEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL 109
+ AL SL T+ A ++ ++FGVPL +VLAR F G+ L++A + +P+V+P V G LL
Sbjct: 20 LTALGLSLRTSAAGTVLCIVFGVPLAFVLARASFPGQRLLRAFVLLPLVLPPVVGGNPLL 79
Query: 110 VTFSNA-------------ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVART 156
TF I S ++ A FV+ PF + S K E VA T
Sbjct: 80 YTFGRQGLLGRTLELAGMQIAFSTTAVVLAQTFVALPFLVVSLEGALRTAGIKYEAVAAT 139
Query: 157 LGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVA-YYPKTAQVLVMEYF-- 213
LGA +S+P+ LP IASG+++++AR + E GA L A + L +E +
Sbjct: 140 LGAHPTTVLRRVSIPLVLPGIASGSVLSFARCLGEFGATLTFAGSLQGVTRTLPLEIYLQ 199
Query: 214 NNYGLRASRPISVILMGISLGI 235
A+R +S++L+ +++ +
Sbjct: 200 RETDADAARRLSLLLVAVAVAV 221
>gi|7524888 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023606|sp|P56343|CYST_CHLVU PROBABLE SULFATE
TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|7442819|pir||T07318 sulfate transport protein cysT -
Chlorella vulgaris chloroplast
>gi|2224482|dbj|BAA57966.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 266
Score = 97.9 bits (240), Expect = 1e-19
Identities = 59/235 (25%), Positives = 119/235 (50%), Gaps = 18/235 (7%)
Query: 17 FLIVYIALPIIVIFTKQALD-FRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
+ + LP++V+F + + +++ DP+ + A ++ A AL++ +FG +
Sbjct: 16 YFFFLLILPVVVLFLLIFQNNWHEVLRKATDPIAVSAYLLTVQMAFYAALVNSIFGFIIT 75
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------------ILDSYKG 122
+VL R F G+ + A +D+P +P SV G+ L + + I+ + G
Sbjct: 76 WVLTRYQFWGREFLDAAVDLPFALPTSVAGLTLATVYGDQGWIGSLFNLFGFQIVFTKIG 135
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
++ AM+FVS PF I + + +++ LE A +LGAS TF + LP P++ +G
Sbjct: 136 VLLAMIFVSFPFVIRTLQPVLQEMEKSLEEAAWSLGASSWETFRKVILPTLWPALFTGFT 195
Query: 183 MAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVILMGISL 233
++++R + E G+I++++ + A VL+ + Y + I +++ I+L
Sbjct: 196 LSFSRALGEFGSIVMISSNLPFKDLVASVLIYQSLEQYDYLGASVIGAVVLLIAL 250
>pir||F70308 Molybdenum transport system permease - Aquifex aeolicus
>gi|2982839|gb|AAC06461.1| (AE000673) Molybdenum
transport system permease [Aquifex aeolicus]
Length = 220
Score = 97.9 bits (240), Expect = 1e-19
Identities = 61/209 (29%), Positives = 111/209 (52%), Gaps = 19/209 (9%)
Query: 51 EALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLV 110
EAL SL + T LI LL + L +LA K+F+GKSLV A++ +P+V+P +V+G L++
Sbjct: 3 EALFLSLKLSFFTTLILLLISLVLSPLLAFKEFKGKSLVVALVTLPLVLPPTVLGFYLIL 62
Query: 111 TFS--------------NAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVART 156
FS +L S++G++ A + S P A+ + ++L + +
Sbjct: 63 LFSPESPFGKLVQSILGKTLLFSFEGLVVASVIYSLPLAVLPLTSAMEKIPKELIYTSYV 122
Query: 157 LGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVAYY----PKTAQVLVMEY 212
G K+ TFF + LP++L + + +M++A + E G +L+V +T + + +
Sbjct: 123 FGYGKVETFFRVILPLSLNGLITSVVMSFANTMGEFGVVLMVGGNIPGETQTLSIFIYDA 182
Query: 213 FNNYGLRASRPISVILMGISLGI-FVVLR 240
+ + SV+L+G+SL + F+VL+
Sbjct: 183 VQALDYKTAHRASVLLVGVSLLVMFIVLK 211
>sp|P16701|CYST_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST
>gi|72517|pir||QRECST sulfate/thiosulfate transport
protein cysT - Escherichia coli
>gi|145659|gb|AAA23637.1| (M32101) cysT [Escherichia
coli] >gi|1788764|gb|AAC75477.1| (AE000330) sulfate,
thiosulfate transport system permease T protein
[Escherichia coli K12] >gi|1799843|dbj|BAA16298.1|
(D90871) SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST.
[Escherichia coli] >gi|1799853|dbj|BAA16307.1| (D90872)
SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYST.
[Escherichia coli]
Length = 277
Score = 97.5 bits (239), Expect = 1e-19
Identities = 59/246 (23%), Positives = 126/246 (50%), Gaps = 19/246 (7%)
Query: 6 YTLYLFAALGSFLIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATA 64
+TL L +L F+ + + LP+ + + A + + + I +P V+ A + +LL+A +
Sbjct: 13 FTLSLGTSL-LFVCLILLLPLSALVMQLAQMSWAQYWEVITNPQVVAAYKVTLLSAFVAS 71
Query: 65 LISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIML-------------LVT 111
+ + +FG+ + ++L R F G++L+ A++D+P +P +V G+ L L
Sbjct: 72 IFNGVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGFYGEWLAK 131
Query: 112 FSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLP 171
F + ++ GI AM F S PF + + + + + E A TLGA++ ++F + LP
Sbjct: 132 FDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFCKVVLP 191
Query: 172 IALPSIASGAIMAWARGISEVGAILI----VAYYPKTAQVLVMEYFNNYGLRASRPISVI 227
P++ +G +++ R + E GA++ +A+ + +++ + A+ I+ +
Sbjct: 192 ELSPALVAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYPAASAIASV 251
Query: 228 LMGISL 233
++ SL
Sbjct: 252 ILAASL 257
>pir||A82310 sulfate ABC transporter, permease protein VC0539 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654967|gb|AAF93707.1| (AE004140) sulfate ABC
transporter, permease protein [Vibrio cholerae]
Length = 283
Score = 96.0 bits (235), Expect = 4e-19
Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 19/244 (7%)
Query: 17 FLIVYIALPII-VIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLG 75
F+ + + LP +I + F + I DP V+ + + ++ +A +L + LFG+ L
Sbjct: 29 FVSLILLLPATGLIMQTSNMTFSEYWQVIADPRVVASYKVTVGSALIASLFNGLFGLLLA 88
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFS-NAILDSYK------------G 122
+VL R F GK ++ A++D+P +P +V GI L +S N + S G
Sbjct: 89 WVLVRYTFPGKRILDALVDLPFALPTAVAGITLATLYSANGWIGSVLAELGIKVAYTPLG 148
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
II AM F S PF + + + + + E TLGAS F+ + LP P++ G
Sbjct: 149 IIVAMAFTSIPFVVRTVQPVLEEISREEEEAGMTLGASDAAVFWKVILPSLKPALLVGTA 208
Query: 183 MAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPI-SVILMGISLGIFV 237
+++ R + E GA++ +A Y + +++ + A+ I SV+L+ L + +
Sbjct: 209 LSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVRLQEFDFPAASAIASVVLLTSLLLLLM 268
Query: 238 VLRW 241
+ W
Sbjct: 269 INLW 272
>pir||A81876 sulfate ABC transporter, inner membrane protein NMA1100
[similarity] - Neisseria meningitidis (group A strain
Z2491) >gi|7379795|emb|CAB84363.1| (AL162755) putative
sulphate permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 278
Score = 95.2 bits (233), Expect = 7e-19
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 21/249 (8%)
Query: 18 LIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLGY 76
L + + LP ++ K A + + TI +P V+ A+ SL + L +++FG + +
Sbjct: 24 LSLLVVLPFAMMAAKAAEIGWSGFWNTITEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAW 83
Query: 77 VLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN-------------AILDSYKGI 123
VL R +F GK L A++D+P +P +V GI L ++ I + GI
Sbjct: 84 VLVRYEFPGKGLANALVDLPFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGI 143
Query: 124 IAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIM 183
A++ VS PF + + + + + E A TLGAS+ TF + LP P++ +GA M
Sbjct: 144 WIALVVVSLPFIVRAVQPVLEELSGEYEEAAATLGASRWTTFRRVLLPEITPALLTGAGM 203
Query: 184 AWARGISEVGAILIVA-YYPKTAQVL------VMEYFNNYGLRASRPISVILMGISLGIF 236
+AR E G+++ +A P +++L +E F+ G A +++ + L
Sbjct: 204 MFARATGEYGSVIFIAGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFAL 263
Query: 237 VVLRWLIGK 245
V++W +G+
Sbjct: 264 NVMQWALGR 272
>sp|Q08382|MODB_RHOCA MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
>gi|541288|pir||D36914 integral membrane protein ModB -
Rhodobacter capsulatus >gi|310275|gb|AAA71910.1|
(L06254) part of molybdenum transport system
[Rhodobacter capsulatus]
Length = 228
Score = 94.8 bits (232), Expect = 9e-19
Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 11/182 (6%)
Query: 44 IHDPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSV 103
+ D ++ L +L AT T ++ L G PL + L+R K +V ++ +PIV+P +V
Sbjct: 6 LFDAAMLTTLALTLKLATVTTVLLLALGTPLAWWLSRGGGLWKEIVATLVSLPIVLPPTV 65
Query: 104 VGIMLLVTF--SNAILD--------SYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHV 153
+G LL+ ++ + D ++ G++ + S PF +N R+ F+A+ + V
Sbjct: 66 LGFYLLIAMGPNSPLTDLLGFKLSFTFAGLVVGSVIYSLPFVVNPIRNAFVAMGPRPMEV 125
Query: 154 ARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIV-AYYPKTAQVLVMEY 212
A TL AS L FF+++LP A P + +GAI+ +A + E G +L++ P +VL +
Sbjct: 126 AATLRASPLDAFFTVALPQAAPGLITGAILGFAHTVGEFGVVLMIGGGIPGRTKVLSVTI 185
Query: 213 FN 214
F+
Sbjct: 186 FD 187
>pir||D81147 sulfate ABC transporter, permease protein NMB0881 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226119|gb|AAF41292.1| (AE002440) sulfate ABC
transporter, permease protein [Neisseria meningitidis
MC58]
Length = 278
Score = 94.8 bits (232), Expect = 9e-19
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 21/249 (8%)
Query: 18 LIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLGY 76
L + + LP ++ K A + + TI +P V+ A+ SL + L +++FG + +
Sbjct: 24 LSLLVVLPFAMMAAKAAEIGWGGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAW 83
Query: 77 VLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN-------------AILDSYKGI 123
VL R +F GK L A++D+P +P +V GI L ++ I + GI
Sbjct: 84 VLVRYEFPGKGLANALVDLPFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGI 143
Query: 124 IAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIM 183
A++ VS PF + + + + + E A TLGAS+ TF + LP P++ +GA M
Sbjct: 144 WIALVVVSLPFIVRAVQPVLEELSGEYEEAAATLGASRWTTFRRVLLPEITPALLTGAGM 203
Query: 184 AWARGISEVGAILIVA-YYPKTAQVL------VMEYFNNYGLRASRPISVILMGISLGIF 236
+AR E G+++ +A P +++L +E F+ G A +++ + L
Sbjct: 204 MFARATGEYGSVIFIAGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFAL 263
Query: 237 VVLRWLIGK 245
V++W +G+
Sbjct: 264 NVMQWALGR 272
>sp|P95156|MODB_MYCTU MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODB
>gi|7442813|pir||B70666 probable transport system
permease for molybdate uptake - Mycobacterium
tuberculosis (strain H37RV) >gi|1781189|emb|CAB06129.1|
(Z83859) modB [Mycobacterium tuberculosis]
>gi|1907088|emb|CAA67643.1| (X99258) membrane-spanning
subunit of ABC-transport system [Mycobacterium
tuberculosis]
Length = 264
Score = 92.8 bits (227), Expect = 3e-18
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 8 LYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALIS 67
+YL A G IV++A+P++ I + +D+ I P AL S+ TA A+ ++
Sbjct: 11 VYLPAIAG---IVFVAMPLVAIAIR--VDWPRFWALITTPSSQTALLLSVKTAAASTVLC 65
Query: 68 LLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN------------- 114
+L GVP+ VLAR R ++ +I +P+V+P V GI LL F
Sbjct: 66 VLLGVPMALVLARSRGRLVRSLRPLILLPLVLPPVVGGIALLYAFGRLGLIGRYLEAAGI 125
Query: 115 AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIAL 174
+I S ++ A FVS P+ + S E VA TLGA ++ ++LP+ L
Sbjct: 126 SIAFSTAAVVLAQTFVSLPYLVISLEGAARTAGADYEVVAATLGARPGTVWWRVTLPLLL 185
Query: 175 PSIASGAIMAWARGISEVGAILIVA 199
P + SG+++A+AR + E GA L A
Sbjct: 186 PGVVSGSVLAFARSLGEFGATLTFA 210
>sp|P37731|MODC_AZOVI MOLYBDENUM TRANSPORT SYSTEM PERMEASE PROTEIN MODC
>gi|419535|pir||S31046 hypothetical protein 3 -
Azotobacter vinelandii
Length = 226
Score = 92.4 bits (226), Expect = 5e-18
Identities = 56/205 (27%), Positives = 105/205 (50%), Gaps = 15/205 (7%)
Query: 50 IEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL 109
+ A+R +L A+ T ++ L+ G P+ + LAR R K + A++ +P+V+P +V+G LL
Sbjct: 8 LAAIRLTLELASLTTVLLLVVGTPIAWWLARTRSRLKGAIGAVVALPLVLPPTVLGFYLL 67
Query: 110 VTFS--------------NAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVAR 155
VT + ++ G++ A +F S PF + ++ F A+ E+ VA
Sbjct: 68 VTMGPHGPIGQLTQFLGLGTLPFTFAGLVVASVFYSLPFVVQPLQNAFEAIGERPLEVAS 127
Query: 156 TLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIV-AYYPKTAQVLVMEYFN 214
TL A TFF++ +P+A P + AI+ +A + E G +L++ P+ + + ++ F+
Sbjct: 128 TLRAGPWDTFFTVVVPLARPGFITAAILGFAHTVGEFGVVLMIGGNIPEKTRTVAVQIFD 187
Query: 215 NYGLRASRPISVILMGISLGIFVVL 239
+ + G+ L F+VL
Sbjct: 188 HVEAMEYAQAHWLAGGMVLFSFLVL 212
>dbj|BAB06848.1| (AP001517) sulfate ABC transporter (permease) [Bacillus halodurans]
Length = 287
Score = 92.4 bits (226), Expect = 5e-18
Identities = 60/241 (24%), Positives = 116/241 (47%), Gaps = 18/241 (7%)
Query: 16 SFLIVYIALPIIVIFTKQ-ALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPL 74
SFL +++ LP+I IF + + +I +P + A++ + L T ++ LFG+
Sbjct: 32 SFLFLFLVLPLIAIFYRAFEQGLAVYFASISEPDALSAIKLTFLVVLITVPLNTLFGIAA 91
Query: 75 GYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN-------------AILDSYK 121
+ + + FRGK+L+ ID+P + + G++ ++ FS+ I+ S
Sbjct: 92 AWAIGKFQFRGKNLLTTFIDLPFSVSPVIAGLIFVLLFSSHGVFGPWLLDRGIQIIFSIP 151
Query: 122 GIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGA 181
GI+ A +FV+ PF A E + TLGAS +T + ++LP ++ G
Sbjct: 152 GIVLATMFVTVPFVARELIPVMQAQGTAQEEASLTLGASGWKTLWHVTLPNVKWALLYGV 211
Query: 182 IMAWARGISEVGAILIVAYY----PKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFV 237
I+ AR I E GA+ +V+ + T + + +N Y A+ ++ ++ +++ +
Sbjct: 212 ILCNARAIGEFGAVSVVSGHIRGLTNTMPLHIEILYNEYQFTAAFAVASLMSLLAIFTLI 271
Query: 238 V 238
V
Sbjct: 272 V 272
>gb|AAC83134.1| (AF109295) ModB [Staphylococcus carnosus]
Length = 223
Score = 92.1 bits (225), Expect = 6e-18
Identities = 57/173 (32%), Positives = 94/173 (53%), Gaps = 15/173 (8%)
Query: 56 SLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA 115
S+ A + +I + G+ + +L R R +L+++II +PIV+P +V+G +LL+ FS
Sbjct: 10 SIKVAVISTIIVSILGIIISRLLYRYRGRIVTLLESIIILPIVLPPTVMGFLLLIVFSPK 69
Query: 116 --------------ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASK 161
++ + G + A + VS P GF ++ K+ + ART+GAS+
Sbjct: 70 SPVGAFFTNVLHLPVVFTLTGAVIASVVVSFPLMYQHTIQGFRGINNKMLNTARTMGASE 129
Query: 162 LRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVA-YYPKTAQVLVMEYF 213
+ FF + LP++ SI SG +MA+AR I E GA L+VA Y P L +E +
Sbjct: 130 NKIFFRLILPLSKRSILSGIMMAFARAIGEFGATLMVAGYIPNKTNTLPLEIY 182
>emb|CAA63862.1| (X94148) putative inner membrane protein [Bacillus licheniformis]
Length = 270
Score = 91.7 bits (224), Expect = 8e-18
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 15/261 (5%)
Query: 2 GGRDYTLYLFAALGSFLIVYIALPIIVI------------FTKQALDFRMLVKTIHDPLV 49
GG+ + ++AA G + +++ALP+ VI F + R I
Sbjct: 10 GGKWIDVCVWAA-GLLVYLFLALPVFVIILSAFSPDEYPKFPPSGVSLRWFAGVISSSGW 68
Query: 50 IEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL 109
+E++ S + ++++ G Y LAR +F GK +QA I P++IP +G+ L
Sbjct: 69 MESIWVSGMLLLVVTPLAVILGTVAAYALARLNFPGKQGIQAFILSPMMIPQIALGVSFL 128
Query: 110 VTFSN-AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSI 168
+ + ++ G+ A + +S P+ + + VD KLE + LGA TFF +
Sbjct: 129 YLLTMLGVNGTFAGLAAGHILISLPYVLRTVGVSMANVDPKLELASMNLGAGPWYTFFHV 188
Query: 169 SLPIALPSIASGAIMAWARGISEVGAILIVAYYPKT-AQVLVMEYFNNYGLRASRPISVI 227
+LP+ P I +GA+ A EV L V+ T V Y + + ISVI
Sbjct: 189 TLPLIKPGIIAGAVFAAVTSFGEVSISLFVSSPAVTPVPVRTFSYIDQTCDPSVNAISVI 248
Query: 228 LMGISLGIFVVLRWLIGKAKS 248
+ +S+ +++ IG +K+
Sbjct: 249 FITVSVIALIIIERTIGLSKT 269
>gb|AAA83839.1| (M16182) unknown protein [Escherichia coli]
Length = 200
Score = 91.3 bits (223), Expect = 1e-17
Identities = 56/186 (30%), Positives = 95/186 (50%), Gaps = 19/186 (10%)
Query: 76 YVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVT--------------FSNAILDSYK 121
++L R F GK+L+ +++ +P+V+P VVG +LLV+ F S++
Sbjct: 5 WLLVRCSFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWR 64
Query: 122 GIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGA 181
G + A +S P + + R VD KLE ARTLGA + R FF+I+LP+ LP I G
Sbjct: 65 GAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGT 124
Query: 182 IMAWARGISEVGA-ILIVAYYPKTAQVLVMEYFNNY----GLRASRPISVILMGISLGIF 236
++A+AR + E GA I V+ P + + + G + + +I + +++
Sbjct: 125 VLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISL 184
Query: 237 VVLRWL 242
++ WL
Sbjct: 185 LISEWL 190
>gb|AAG35386.1| (AF030414) ModB [Gluconacetobacter diazotrophicus]
Length = 228
Score = 91.3 bits (223), Expect = 1e-17
Identities = 58/208 (27%), Positives = 104/208 (49%), Gaps = 15/208 (7%)
Query: 47 PLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGI 106
P V +A ++ A T L ++ +PL + LAR K ++ AII +P+V+P SV+G
Sbjct: 6 PDVQQAAWLTIRLALTTTLFLMIVSLPLAWWLARPGPWWKPVLGAIISLPLVLPPSVLGY 65
Query: 107 MLLVTFS--------------NAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEH 152
L+ F + S+ G++ L PFA+ ++ F A+ +
Sbjct: 66 YFLIAFGPSGPGGWVARLWGGRTLAFSFPGLVVGSLLYVLPFAVQPIQNAFRAIGRRPIE 125
Query: 153 VARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIV-AYYPKTAQVLVME 211
VA TLGAS RTF+++++P+A P I + A++ +A + E G +L++ P +VL +
Sbjct: 126 VAATLGASPWRTFWTVAVPLAWPGIVTAAVLGFAHSVGEFGIVLMIGGDIPGRTRVLSVA 185
Query: 212 YFNNYGLRASRPISVILMGISLGIFVVL 239
++ ++I G+ L F+V+
Sbjct: 186 LYDYVENARWHDANMIACGMVLFSFIVI 213
>gb|AAK41295.1| Sulfate ABC transporter, permease protein [Sulfolobus solfataricus]
Length = 265
Score = 90.9 bits (222), Expect = 1e-17
Identities = 71/249 (28%), Positives = 125/249 (49%), Gaps = 26/249 (10%)
Query: 13 ALGSFLIVYIALPIIVIFTKQALDFRMLVKTI-HDPLVIEALRNSLLTATATALISLLFG 71
A+ FL + +ALP + + F VK++ ++ ++ S + + +I++L
Sbjct: 13 AISFFLSLLLALPTLYLLFYGYGPF--FVKSVAFSSSLLSSIGLSFFASALSIVITVLIF 70
Query: 72 VPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL-----------VTFSNAILD-- 118
PL Y L+R +++ ++DVP IPH +VGI L+ + +S+ I+
Sbjct: 71 TPLAYYLSR---HRNPIIETLVDVPASIPHPLVGIALIFIDSPTNPLGALLYSHGIIFYY 127
Query: 119 SYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIA 178
+Y G++ A++ VS+P I S ++ F ++ E A +LGAS+ + F S+ P+++ I
Sbjct: 128 TYTGLLLALIIVSSPIYIRSMQNFFESLPRSYEIYAMSLGASEFKVFTSVVFPLSIRGII 187
Query: 179 SGAIMAWARGISEVGAILIVAYYP-----KTAQVLVMEYFNNYG--LRASRPISVILMGI 231
S + + AR ISE G+++IVA Y A V + +N Y AS S L+
Sbjct: 188 SAGLTSIARAISEFGSVVIVAPYVTGWLFNNAYVASVYIYNEYETYFSASISASATLLLF 247
Query: 232 SLGIFVVLR 240
SL + V R
Sbjct: 248 SLILIVTSR 256
>pir||A81449 probable molybdenum transport system permease protein Cj0301c
[imported] - Campylobacter jejuni (strain NCTC 11168)
>gi|6967775|emb|CAB72768.1| (AL139074) putative
molybdenum transport system permease protein
[Campylobacter jejuni]
Length = 224
Score = 88.9 bits (217), Expect = 5e-17
Identities = 53/178 (29%), Positives = 93/178 (51%), Gaps = 15/178 (8%)
Query: 46 DPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVG 105
DP ++ L + A T I GV L Y+L+ F K+++Q+ I +P+++P SV+G
Sbjct: 3 DPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKTILQSFISLPLILPPSVLG 62
Query: 106 IMLLVTFSN--------------AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLE 151
LLVTFS +++ S++G++ A L S PF +N + F +++ L
Sbjct: 63 FYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFSLPFMVNPLQSAFSSINPNLL 122
Query: 152 HVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLV 209
+ +LG SK+ T F + LP + I S M++A + E G ++++ + K + LV
Sbjct: 123 DASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTVGEFGVVMMIGGH-KQGETLV 179
>pir||A83413 molybdenum transport protein ModB PA1862 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9947851|gb|AAG05251.1|AE004612_5 (AE004612)
molybdenum transport protein ModB [Pseudomonas
aeruginosa]
Length = 228
Score = 88.2 bits (215), Expect = 9e-17
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 15/185 (8%)
Query: 46 DPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVG 105
D + A+ ++ A+ T L+ LL G P+ + LAR K + A++ +P+V+P +V+G
Sbjct: 6 DSTDLAAIWLTIELASLTTLLLLLIGTPIAWWLARTRSWLKGPIGAVVALPLVLPPTVIG 65
Query: 106 IMLLVTFS--------------NAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLE 151
LLV+ + ++ G++ +F S PF + ++ F A+ EK
Sbjct: 66 FYLLVSMGPNGFIGQLTQSLGLGTLPFTFAGLVVGSVFYSLPFVVQPLQNAFEAIGEKPL 125
Query: 152 HVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIV-AYYPKTAQVLVM 210
A TL AS + FFS+ LP+A P + AI+ +A + E G +L++ P+ +V+ +
Sbjct: 126 EAAATLRASPVDRFFSVVLPLARPGFVTAAILGFAHTVGEFGVVLMIGGNIPEKTRVVSV 185
Query: 211 EYFNN 215
+ F++
Sbjct: 186 QIFDH 190
>pir||E75187 sugar abc transporter, permease protein PAB2335 - Pyrococcus abyssi
(strain Orsay) >gi|5457457|emb|CAB48948.1| (AJ248283)
SUGAR ABC TRANSPORTER, PERMEASE PROTEIN [Pyrococcus
abyssi]
Length = 277
Score = 87.8 bits (214), Expect = 1e-16
Identities = 63/206 (30%), Positives = 102/206 (48%), Gaps = 12/206 (5%)
Query: 7 TLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPL-VIEALRNSLLTATATAL 65
TLY F+ + + +P FT Q VKTI L ++NS++ A T +
Sbjct: 33 TLYAFSTKADYYNPHKVIP--TSFTSQ------WVKTILFTLGAWSGIKNSIIVAVLTII 84
Query: 66 ISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-ILDSYKGII 124
IS L G+P GY +AR F+GK ++ I + P V+ I L+V + ++D+ G+
Sbjct: 85 ISFLLGIPAGYAIARYVFKGKDTIKLSIVALRMFPIPVMAIPLVVLYIKLNLIDTLLGVA 144
Query: 125 AAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMA 184
A ++ PF + F VD++LE G ++ F SI+LP+ALP +A+ A+
Sbjct: 145 LAHTAMALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGAFKSITLPLALPGLAAAAMFT 204
Query: 185 WARGISEVGAILIVAYYPKT--AQVL 208
+ +EV I+ +T AQ+L
Sbjct: 205 FVMSWNEVFVASILTLKNRTLPAQIL 230
>pir||A83610 sulfate transport protein CysW PA0281 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946124|gb|AAG03670.1|AE004466_4 (AE004466) sulfate
transport protein CysW [Pseudomonas aeruginosa]
Length = 289
Score = 87.8 bits (214), Expect = 1e-16
Identities = 63/258 (24%), Positives = 124/258 (47%), Gaps = 21/258 (8%)
Query: 2 GGRDYTLYLFAALGSFLIVYIALPIIVIFTKQALD-FRMLVKTIHDPLVIEALRNSLLTA 60
GGR L L +++ LP+ V+ ++ F + I +P + AL+ +L+
Sbjct: 20 GGR---LALIVLAWLVFALFLLLPLYVVLSEALKQGFGTFFEAILEPDALAALKLTLIAV 76
Query: 61 TATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN------ 114
+ ++LLFGV + +++ +FRGKS++ +ID+P + + G++ ++ F
Sbjct: 77 AISVPLNLLFGVAAAWCVSKFEFRGKSILVTLIDLPFSVSPVIAGLIYVLLFGAQGYFGE 136
Query: 115 -------AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFS 167
I+ + GI+ A LFV+ PF + E AR LGA+ + F+
Sbjct: 137 WLSDHDIQIVFAVPGIVLATLFVTVPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWH 196
Query: 168 ISLPIALPSIASGAIMAWARGISEVGAILIVAYY----PKTAQVLVMEYFNNYGLRASRP 223
++LP + G ++ AR + E GA+ +V+ + T + V +N Y A+
Sbjct: 197 VTLPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLPLHVEILYNEYNHVAAFS 256
Query: 224 ISVILMGISLGIFVVLRW 241
++ +L+ ++L I ++ +W
Sbjct: 257 VASLLLLMALVILLLKQW 274
>pir||S77084 ABC-type transport protein sll0739 - Synechocystis sp. (strain PCC
6803) >gi|1006620|dbj|BAA10776.1| (D64005) ABC
transporter [Synechocystis sp.]
Length = 615
Score = 86.6 bits (211), Expect = 3e-16
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 56 SLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN- 114
SL TA +++ + G+ Y + GKSLV+A+ P+++P +VVG +LL+ F
Sbjct: 11 SLKTAGLATVVTFILGIAAAYGMLGDRQPGKSLVEAVFIAPLILPPTVVGFLLLLLFGKN 70
Query: 115 -------------AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASK 161
+ Y +I A + VS P + F VD L VA+TLGAS+
Sbjct: 71 GPLGKILAQFDVTIVFTWYAAVITATV-VSFPLMYKTTLGAFEQVDRHLLQVAQTLGASR 129
Query: 162 LRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVA 199
F I LP++LP I +G +A+AR + E GA L+VA
Sbjct: 130 GEVFRRILLPLSLPGILAGTTLAFARSLGEFGATLMVA 167
>sp|P18795|NIFC_CLOPA PROBABLE TRANSPORT SYSTEM PERMEASE PROTEIN NIFC
>gi|98607|pir||A35608 nifC protein - Clostridium
pasteurianum >gi|144869|gb|AAA23264.1| (M34365)
nitrogenase C (nifC) [Clostridium pasteurianum]
Length = 286
Score = 85.8 bits (209), Expect = 4e-16
Identities = 57/205 (27%), Positives = 99/205 (47%), Gaps = 18/205 (8%)
Query: 10 LFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLL 69
LF AL + V + PII + +++T++D I+ + S +T+ + + +
Sbjct: 34 LFLALTAIYFVMLIFPIISMIRYSGGSH--IIQTLYDQDNIKTIILSFVTSLIALIFTFI 91
Query: 70 FGVPLGYVL--ARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFS-NAILDSY------ 120
G P + + R K ++ +++P+V+P +V GI LL+ F N ++ ++
Sbjct: 92 IGTPTAFCINFVRNKVLSK-ILDIFVEIPVVLPPAVAGIALLLAFGKNGVVGNFLSNHGI 150
Query: 121 ------KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIAL 174
+I A FVS+ + RD +V +L V+ LGA K+ T I +P+
Sbjct: 151 NVIFTSTAVIIAQFFVSSALYVRVLRDSVKSVPIELFEVSYVLGAGKIETIIKIMIPMLK 210
Query: 175 PSIASGAIMAWARGISEVGAILIVA 199
SI SG I+AW R + E GA L+ A
Sbjct: 211 KSIVSGLILAWIRSLGEFGATLMFA 235
>emb|CAA67414.1| (X98917) orf3 [Methanopyrus kandleri]
Length = 261
Score = 85.8 bits (209), Expect = 4e-16
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 10 LFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLL 69
LF L IV+ + +++ T Q + + DP A N++L A A A ++
Sbjct: 11 LFPPLFFIFIVFPLVALVLNLTPQGI-----AEAFSDPYFWSATFNTILCAVAAAAAGVI 65
Query: 70 FGVPLGYV-LARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFS---------NAILDS 119
+ GY L ++D + + D+PI +PH+V G+ LL+ F N + +
Sbjct: 66 IAIGFGYYHLFKRDSVIYRVADFLNDLPIALPHTVAGLALLLAFGRNYFGWLGENGLAFT 125
Query: 120 YKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIAS 179
++ AMLFVS P A + + G + +L VARTLG + + + +P ++
Sbjct: 126 LIAVVLAMLFVSYPLAARAVQAGVEELGRELVDVARTLGDEPPKAYVRVVVPALQEALLG 185
Query: 180 GAIMAWARGISEVGAILIV-AYYPKTAQVLVMEYF---NNYGLRASRPISVILMGISLGI 235
G ++ ++R +SE A+++ P QVL F + L + SV M +SL +
Sbjct: 186 GFLLGFSRSLSEFAAVIMFGGNLPGRTQVLASYVFTRAESGDLEVAVAASVFCMVLSLTM 245
Query: 236 FVVLRWLIG 244
++R + G
Sbjct: 246 VALVRSVTG 254
>pir||E81015 ABC transporter, permease protein NMB2026 [imported] - Neisseria
meningitidis (group B strain MD58)
>gi|7227288|gb|AAF42349.1| (AE002552) ABC transporter,
permease protein [Neisseria meningitidis MC58]
Length = 531
Score = 85.8 bits (209), Expect = 4e-16
Identities = 69/251 (27%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 1 MGGRDYTLY-LFAALGS-FLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLL 58
M GR + ++ FA L S FL V + P+ + L +R ++ D +++ L ++
Sbjct: 19 MDGRRWVVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS---DAYMLKRLAWTVF 75
Query: 59 TATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTF-SNAIL 117
A AT ++ L GVP+ +VLAR F G++LV ++ +P V+P V G+ +L F ++ +L
Sbjct: 76 QAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLVAGVGVLALFGADGLL 135
Query: 118 -----DSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPI 172
D+ ++ +F + P + +A GF+ V ARTLGA R F+ I +P+
Sbjct: 136 WRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTARTLGAGAWRRFWDIEMPV 195
Query: 173 ALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGIS 232
P +A G + + S G L++ + A V V Y +++ +
Sbjct: 196 LRPWLAGGVCLVFLYCFSGFGLALLLG-GSRYATVEVEIY------------QLVMFELD 242
Query: 233 LGIFVVLRWLI 243
+ + VL WL+
Sbjct: 243 MAVASVLVWLV 253
>pir||D71220 probable sugar transport membrane protein - Pyrococcus horikoshii
>gi|3256408|dbj|BAA29091.1| (AP000001) 277aa long
hypothetical sugar transport membrane protein
[Pyrococcus horikoshii]
Length = 277
Score = 85.0 bits (207), Expect = 8e-16
Identities = 49/161 (30%), Positives = 87/161 (53%), Gaps = 3/161 (1%)
Query: 51 EALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLV 110
+ ++NS++ AT T +IS + G+P GY +AR F+GK ++ I + P V+ I L+V
Sbjct: 70 DGIKNSVIVATLTIIISFILGIPAGYAIARFAFKGKDTIKLSIVALRMFPIPVMAIPLVV 129
Query: 111 TFSNA-ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSIS 169
+ ++D+ G+ A ++ PF + F VD++LE G ++ F +I+
Sbjct: 130 LYIKLKLIDTLFGVALAHTAMALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGAFRNIT 189
Query: 170 LPIALPSIASGAIMAWARGISEVGAILIVAYYPKT--AQVL 208
LP+ALP +A+ A+ + +EV I+ +T AQ+L
Sbjct: 190 LPLALPGLAAAAMFTFVMSWNEVFVASILTLKNRTLPAQIL 230
>pir||A81958 probable permease NMA0414 [imported] - Neisseria meningitidis
(group A strain Z2491) >gi|7379164|emb|CAB83713.1|
(AL162753) putative permease [Neisseria meningitidis
Z2491]
Length = 530
Score = 84.3 bits (205), Expect = 1e-15
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 24/251 (9%)
Query: 1 MGGRDYTLY-LFAALGS-FLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLL 58
M GR + ++ FA L S FL + P+ + L +R ++ D +++ L ++
Sbjct: 18 MDGRRWAVWGAFALLPSAFLAAMVVAPLWAVAAYDGLAWRAVLS---DAYMLKRLAWTVF 74
Query: 59 TATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTF-SNAIL 117
A AT ++ L GVP+ +VLAR F G++LV ++ +P V+P V G+ +L F ++ +L
Sbjct: 75 QAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLVAGVGVLALFGADGLL 134
Query: 118 -----DSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPI 172
D+ ++ +F + P + +A GF+ V ARTLGA R F+ I +P+
Sbjct: 135 WRGWQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTARTLGAGAWRRFWDIEMPV 194
Query: 173 ALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGIS 232
P +A G + + S G L++ + A V V Y +++ +
Sbjct: 195 LRPWLAGGVCLVFLYCFSGFGLALLLG-GSRYATVEVEIY------------QLVMFELD 241
Query: 233 LGIFVVLRWLI 243
+ + VL WL+
Sbjct: 242 MAVASVLVWLV 252
>sp|P74547|CYSW_SYNY3 SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|7442785|pir||S76742 hypothetical protein -
Synechocystis sp. (strain PCC 6803)
>gi|1653743|dbj|BAA18654.1| (D90916) sulfate transport
system permease protein [Synechocystis sp.]
Length = 276
Score = 83.5 bits (203), Expect = 2e-15
Identities = 62/239 (25%), Positives = 113/239 (46%), Gaps = 19/239 (7%)
Query: 9 YLFAALGSF-LIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALI 66
YL AL F LI+ + LP I +F + ++ + D AL+ +++ A + +
Sbjct: 14 YLLIALALFYLILVLLLPAIAVFYEAFHKGVEPFIQAMGDRNFQSALQLTVVMALISVPL 73
Query: 67 SLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN------------ 114
+ +FG+ +VLAR F G++L +++D+P I V G+M+++ +
Sbjct: 74 NTVFGLCAAWVLARNQFPGRALFLSVLDLPFSISPVVAGLMIVLLYGKNGWIGSWFASWD 133
Query: 115 -AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIA 173
I+ S G+ A +FV+ PF + + E ARTLGA + F+ ++LP
Sbjct: 134 IQIIFSVPGMAIATIFVTLPFVAREVIPVLEELGPEQEEAARTLGAKDWQIFWRVTLPNI 193
Query: 174 LPSIASGAIMAWARGISEVGAILIVA----YYPKTAQVLVMEYFNNYGLRASRPISVIL 228
+ G ++ AR + E GA+ +V+ T + V + + NY A+ +V+L
Sbjct: 194 RWGLLYGVLLTNARAMGEFGAVAVVSGSILGKTSTLPIFVEQEYKNYQTEAAFGAAVVL 252
>pir||G75412 spermidine/putrescine ABC transporter, permease protein -
Deinococcus radiodurans (strain R1)
>gi|6459052|gb|AAF10874.1|AE001977_7 (AE001977)
spermidine/putrescine ABC transporter, permease protein
[Deinococcus radiodurans]
Length = 270
Score = 82.7 bits (201), Expect = 4e-15
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 31/271 (11%)
Query: 1 MGGRDYTLYLFAALGSFLIVYIALPIIVIF---------TKQALDFRMLVKTIHDPLVIE 51
M R + L A ++ +Y+ + ++++F T Q + P V E
Sbjct: 1 MTRRTHPLLSLWAWLTYAFLYLPILVLIVFSFNDSKFGATWQGFTTKWYSVLFARPDVRE 60
Query: 52 ALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLV- 110
A+ N+LL A + ++ + G +G+ L R FRG+ + ++ +PIVIP V+G+MLL+
Sbjct: 61 AVTNTLLVAVGSTAVATVLGTLVGFGLWRGGFRGRLPLTFLLVMPIVIPDVVMGVMLLMF 120
Query: 111 -------------TFSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTL 157
TF N + ++A + F + A+N R +LE A L
Sbjct: 121 YALVRGLLERTGWTFENGF---WTVMLAHVTFQLSYVALN-VRSRLAGYGRELEEAAADL 176
Query: 158 GASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYG 217
GA+ +++FF + LP+ALP + SGA++A+ + + +V Y+ + +
Sbjct: 177 GATPVQSFFQVILPLALPGVLSGALLAFTLSLDD----FVVTYFTSGSGFKTLPVLIYTS 232
Query: 218 LRASRPISVILMGISLGIFVVLRWLIGKAKS 248
++ + + L +F VL ++G S
Sbjct: 233 VKKGVTPDINALSAMLVLFTVLLLVMGNVLS 263
>pir||E83605 probable permease of ABC transporter PA0324 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946171|gb|AAG03713.1|AE004470_7 (AE004470) probable
permease of ABC transporter [Pseudomonas aeruginosa]
Length = 262
Score = 82.7 bits (201), Expect = 4e-15
Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 20/246 (8%)
Query: 17 FLIVYIALPIIVIFTK---------QALDFRMLVKTIHDPLVIEALRNSLLTATATALIS 67
F +YI + ++V+ + ++ + +DP ++ A +NSLL AT L S
Sbjct: 21 FAFLYIPILVLVVLSFNSGQSATLWESFSLKWYAVVANDPEILRAAKNSLLVATLATLAS 80
Query: 68 LLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILD-SYKGIIAA 126
+ + + FRG++L+ ++ +P+++P V + L+ FS L S I+ A
Sbjct: 81 TVLATLAALGMRGRAFRGQTLMNGVLGLPLLVPEIVTAVATLMFFSFIGLKLSLFTILIA 140
Query: 127 MLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWA 186
+ PFA R +D +L A L AS + F+ I+LP+ +P + SGA++A+
Sbjct: 141 HIVFCIPFAYLPIRARLEGLDPRLAEAAADLYASPWKAFWKITLPLLMPGVLSGAMLAFI 200
Query: 187 RGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRAS-----RPISVILMGISLGIFVVLRW 241
+ + ++ Y+ A + + +R IS I++ IS+ FV L +
Sbjct: 201 ISMDD----FVITYFVAGAGATTLPVYIFSSIRMGISPKINAISSIILMISIA-FVALSY 255
Query: 242 LIGKAK 247
+G+ +
Sbjct: 256 YLGQRR 261
>pir||B71007 hypothetical protein PH1352 - Pyrococcus horikoshii
>gi|3257775|dbj|BAA30458.1| (AP000006) 559aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 559
Score = 81.5 bits (198), Expect = 9e-15
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 52 ALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVT 111
AL N+L ISLL +PL Y+ RK RGKS++ ++ +P+ ++G+ L+T
Sbjct: 362 ALLNTLRFGFLAVGISLLLSLPLAYLSIRKKLRGKSIIDVLVTLPLASSPVILGLGYLIT 421
Query: 112 F-SNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISL 170
F S+ I + I A V+ PF + V + L A TLGA++ +F I L
Sbjct: 422 FRSSPIYGHWILIALAHATVAYPFVFRTVSLAIQKVKKNLSEAALTLGANEAYSFMRIEL 481
Query: 171 PIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVL-VMEYFNNYGLRASRPISVILM 229
P+ + ++ A+A ++E+ ++A T L + ++ ++ + +SVILM
Sbjct: 482 PLIKGGVLVASVFAFAISVAELATTYMLAKPEYTTLTLAIYKFISSRQFGPASALSVILM 541
Query: 230 GISLGIFVVL 239
IS+ F+++
Sbjct: 542 AISMLSFLLI 551
Score = 77.6 bits (188), Expect = 1e-13
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 10/188 (5%)
Query: 7 TLYLFAALGSFLIVYIA--LPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATA 64
+++ A SFL+++ +P + I + L F+ L+ + D + + A +
Sbjct: 36 SIFTILAFSSFLLLFTLFYIPFLRILSL-GLSFQGLLAVLRDSYYRRVISFTFGQAVLST 94
Query: 65 LISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-------IL 117
+++L+ P YVL+ DF GK ++AII VP V+P +V + ++ F IL
Sbjct: 95 VLTLIVSFPGAYVLSHYDFPGKRTLKAIITVPFVMPSVMVALGFIILFGKQGPFSWLNIL 154
Query: 118 DSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSI 177
S+K I+ A +F + P + + ++ E A +LGA F ++LP+ PSI
Sbjct: 155 YSWKAIVLAHIFYNYPVVVRIVSSAWERINPHYEEAALSLGAKGFTLFRKVTLPLLFPSI 214
Query: 178 ASGAIMAW 185
++M +
Sbjct: 215 LLSSLMTF 222
>pir||T35451 ABC transporter integral membrane protein - Streptomyces coelicolor
>gi|3319739|emb|CAA19905.1| (AL031035) ABC transporter
integral membrane protein [Streptomyces coelicolor
A3(2)]
Length = 553
Score = 80.8 bits (196), Expect = 1e-14
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 33/266 (12%)
Query: 8 LYLFAALGSFLIVYIALPIIVIFTKQA-LDFRMLVKTIHDPLVIEALRNSLLTATATALI 66
L L A +F V+ A P+ I + D + I D L +R+ L T AL
Sbjct: 18 LGLMAVPVAFFAVFFAYPVAAIVARGLKTDGVWQLGRIGDVLAQSDVRHVLWFTTWQALA 77
Query: 67 S----LLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFS-NAILDSYK 121
S LL +P YV AR DF GK +++A++ VP V+P VVG L + D
Sbjct: 78 STGLTLLVALPGAYVFARFDFPGKQVLRAVVTVPFVLPTVVVGTAFLALVGRGGLFDELW 137
Query: 122 G---------IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPI 172
G I+ A +F + + + + +D + E AR LGAS+LR + ++LP
Sbjct: 138 GLRLDTTVWAILLAHVFFNYAVVVRTVGGLWAQLDPRQEEAARMLGASRLRAWRQVTLPA 197
Query: 173 ALPSIASGAIMAWARGISEVGAILI----------VAYYPKTAQVLVMEYFNNYGLRASR 222
P++A+ A+M + + G + I V Y +T+QV + L +
Sbjct: 198 LAPAVAAAALMVFLFTFTSFGVVQILGGPTFSTLEVEIYRQTSQV--------FDLSTAA 249
Query: 223 PISVILMGISLGIFVVLRWLIGKAKS 248
+++I + + V W + + ++
Sbjct: 250 VLTLIQFAAVVAVLAVHAWTVRRRET 275
>gb|AAG20068.1| (AE005086) spermidine/putrescine ABC transporter permease; PotC
[Halobacterium sp. NRC-1]
Length = 271
Score = 80.8 bits (196), Expect = 1e-14
Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 15/243 (6%)
Query: 6 YTLYLFAALGSFLIVYIALPI------IVIFTKQALDFRMLVKTIHDPLVIEALRNSLLT 59
+T+ + A L L+V I L + I+ FT L T+ D ++ ++ NS
Sbjct: 18 WTVAVLAVLWLPLVVIIVLSVAENAATILPFTGVTLAHYQA--TLQDGALLGSVANSATI 75
Query: 60 ATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN--AIL 117
AT ++++ GVP L R D + + + +P+V+P V+GI +L++ I
Sbjct: 76 ATLASVLATAVGVPASVALVRYDVPLSNAFRVAVVLPMVVPGVVLGIGVLISIRTLPGIT 135
Query: 118 DSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSI 177
+ + PF + AVD+ L AR LGAS L F ++LP P++
Sbjct: 136 PGFVPTVLTHAVYGLPFVVLLVSARLAAVDDTLADAARDLGASPLVAFRDVTLPAIAPAV 195
Query: 178 ASGAIMAWARGISEVGAILIVAYYPK-TAQVLVMEYFNNYGLRASRPISVILMGISLGIF 236
ASG + AW R E + AY+ T VL E + + ++VI + +
Sbjct: 196 ASGFLFAWVRSFEE----FVRAYFVSGTTDVLTTEMYALLAYGTAPKLNVIATLVLFVLA 251
Query: 237 VVL 239
VVL
Sbjct: 252 VVL 254
>sp|Q44123|AFUB_ACTPL FERRIC TRANSPORT SYSTEM PERMEASE PROTEIN AFUB
>gi|1469285|gb|AAB05031.1| (U05042) afuB gene product
[Actinobacillus pleuropneumoniae]
>gi|1477454|gb|AAB17217.1| (U04954) afuB [Actinobacillus
pleuropneumoniae]
Length = 687
Score = 80.8 bits (196), Expect = 1e-14
Identities = 58/248 (23%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Query: 6 YTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATAL 65
+ ++ FA GS + V +T ++ ML +L N+++ A A
Sbjct: 432 WVVFNFALYGSIFYGSFTVNWGVDYTLTLNNYAMLFGQGLSDGAWPSLINTMIYAGIAAP 491
Query: 66 ISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA---ILDSYKG 122
++ LFG+ + Y++ RKDF+GK ++ + + +P +V G+ ++ F++A I +
Sbjct: 492 LTALFGLLIAYIVVRKDFQGKKTLEFLTMLCFAVPGTVAGVSYILAFNDAPMYITGTGII 551
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
II +M+ P + +A G +D+ L+ + +L S L+T + I P+ P++ S +
Sbjct: 552 IIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFPLLKPALLSALV 611
Query: 183 MAWARGISEVGAILIVAYYP---KTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVL 239
++ R ++ V AI+ + TA +L YG+ + IL+ + + I +
Sbjct: 612 TSFVRAMTTVSAIVFLVTADTRVATAYILNRVEDGEYGVAIA--YGSILIVVMMAIILFF 669
Query: 240 RWLIGKAK 247
W++G +
Sbjct: 670 DWIVGDTR 677
>sp|P16702|CYSW_ECOLI SULFATE TRANSPORT SYSTEM PERMEASE PROTEIN CYSW
>gi|145660|gb|AAA23638.1| (M32101) sulfate permease
[Escherichia coli] >gi|1799842|dbj|BAA16297.1| (D90871)
sulfate/thiosulfate transport protein cysW [Escherichia
coli] >gi|1799852|dbj|BAA16306.1| (D90872)
sulfate/thiosulfate transport protein cysW [Escherichia
coli]
Length = 291
Score = 80.4 bits (195), Expect = 2e-14
Identities = 58/256 (22%), Positives = 124/256 (47%), Gaps = 24/256 (9%)
Query: 9 YLFAALGSFLIVYIAL-PIIVIFTKQALDFRM-LVKTIHDPLVIEALRNSLLTATATALI 66
+ +G + +I L P+I IF + M +++ + DP ++ A+ +++ A +
Sbjct: 20 WFLIGIGMLVSAFILLVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPV 79
Query: 67 SLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN------------ 114
+L+FG+ L +++ R +F G+ L+ ++D+P + V G++ L+ + +
Sbjct: 80 NLVFGILLAWLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHN 139
Query: 115 -AILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIA 173
I+ S+ G++ +FV+ PF + L+ + + A LGAS + F ++LP
Sbjct: 140 LQIMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNI 199
Query: 174 LPSIASGAIMAWARGISEVGAILIVA--------YYPKTAQVLVMEYFNNYGLRASRPIS 225
++ G ++ AR I E GA+ +V+ P ++L +Y N G + +
Sbjct: 200 RWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDY-NTVGSFTAAALL 258
Query: 226 VILMGISLGIFVVLRW 241
++ I+L + +L+W
Sbjct: 259 TLMAIITLFLKSMLQW 274
>pir||G81929 probable iron-uptake permease inner membrane protein NMA0843
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379559|emb|CAB84124.1| (AL162754) putative
iron-uptake permease inner membrane protein [Neisseria
meningitidis Z2491]
Length = 509
Score = 80.4 bits (195), Expect = 2e-14
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 12/237 (5%)
Query: 18 LIVYIALPIIVIFTKQAL-----DFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGV 72
LI+ IALP+ + F A+ V+ + P + + L N+L LIS++ G+
Sbjct: 17 LILLIALPLTLPFLYVAMRSWQVGINRAVELLFRPRMWDLLSNTLTMMAGVTLISIVLGI 76
Query: 73 PLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL-VTFSNAILDSYKGIIAAMLFVS 131
+ R F GK+ Q I +P+ IP V + +TF ++ + G + M S
Sbjct: 77 ACALLFQRYRFFGKTFFQTAITLPLCIPAFVSCFTWISLTFR---VEGFWGTVMIMSLSS 133
Query: 132 APFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISE 191
P A + + V+ +LG S+L+TFFS LP P+I S ++ + E
Sbjct: 134 FPLAYLPVEAALKRISLSYKEVSLSLGKSRLQTFFSAILPQLKPAIGSSVLLIALHMLVE 193
Query: 192 VGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLRWLI-GKAK 247
GA+ I+ YP + EY +Y + +S +LM + GI V + GKAK
Sbjct: 194 FGAVSIL-NYPTFTTAIFQEYEMSYNNNTAALLSAVLMAV-CGIVVFGESIFRGKAK 248
>pir||G75267 ABC transporter, permease protein, CysTW family - Deinococcus
radiodurans (strain R1)
>gi|6460308|gb|AAF12029.1|AE002078_2 (AE002078) ABC
transporter, permease protein, CysTW family [Deinococcus
radiodurans]
Length = 515
Score = 79.6 bits (193), Expect = 3e-14
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 46 DPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVG 105
DP +E L +L A TA ++LL G PL Y+L+R + GK ++ +P V P ++V
Sbjct: 43 DPYFLERLGWTLTQAAGTAGLALLVGAPLAYLLSRYEVPGKGAFLRLLLLPFVTP-TLVA 101
Query: 106 IMLLVTFSNA-----------ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVA 154
++ L + + ++ +I LF + P I A GF V L A
Sbjct: 102 VLGLTALAGPHGWLTRLTGLDLSETPALLIWGNLFFNLPVMIRLAYGGFARVPTNLIGAA 161
Query: 155 RTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFN 214
RTLGAS R + ++LP+ALP +A+GA++ + G L +A + L +E +
Sbjct: 162 RTLGASGARAAWDVALPLALPGLAAGAVLVFLYSALSFG--LPLALGGERYATLEVEIYT 219
Query: 215 NYGLRASRPISVILMGISLGIFVVLRWL 242
L+ P + L+ L + +V WL
Sbjct: 220 LTALQLRLPEASALIVGQLALTLVATWL 247
>gb|AAB95374.1| (U75349) putative permease BitF [Brachyspira hyodysenteriae]
Length = 257
Score = 78.0 bits (189), Expect = 1e-13
Identities = 58/201 (28%), Positives = 104/201 (50%), Gaps = 10/201 (4%)
Query: 52 ALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVT 111
+++N+ L T I ++ G+ + Y+ R+ S++ I P +IP SV+GI LL+
Sbjct: 55 SIKNTYLYGIITIFIIVIMGMFIAYISIRRKNILTSVIDTITMFPYIIPGSVLGITLLLA 114
Query: 112 FSNA--ILDSYKGIIAAMLFVSA-PFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSI 168
F+ IL II L + P+ + S+ + +E + +LGAS+++TFF I
Sbjct: 115 FNKPPIILSGTSMIIIMSLVIRRMPYTLRSSSAILYQISTSMEEASISLGASQVKTFFKI 174
Query: 169 SLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFN----NYGLRASRPI 224
+ + LP + SGAI++W I+E+ + +I+ Y K+ + V Y +YG A+ +
Sbjct: 175 TAMMMLPGVISGAILSWITVINELSSSVIL-YTGKSRTMAVSIYQEVIRASYGTAAA--L 231
Query: 225 SVILMGISLGIFVVLRWLIGK 245
S IL ++ ++ L GK
Sbjct: 232 STILTLSTIISLLIFFKLTGK 252
>pir||F75124 abc transporter integral membrane protein PAB0543 - Pyrococcus
abyssi (strain Orsay) >gi|5458222|emb|CAB49711.1|
(AJ248285) ABC TRANSPORTER INTEGRAL MEMBRANE PROTEIN
[Pyrococcus abyssi]
Length = 533
Score = 78.0 bits (189), Expect = 1e-13
Identities = 57/237 (24%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 17 FLIVYIALPIIVIFTKQALD--------FRMLVKTIHDPLV----IEALRNSLLTATATA 64
F++V+I P+ + K + FR ++P+ + + N+L
Sbjct: 289 FVLVFIISPLFAVIYKALMFNDRLSLEWFRRAFSEEYNPMFGTSSLMTILNTLKFGFIAV 348
Query: 65 LISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILDSYKGII 124
LI+++ +PL V+AR+ FRGK L++ +P+ ++G+ L+ F + L + +I
Sbjct: 349 LIAVILALPLARVIAREKFRGKGLLEVFATLPLASSSVMLGLGYLLAFRDTSLYGHWLLI 408
Query: 125 A-AMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIM 183
A A V+ PFA + + + L + TLGAS+ +F + LP+ + I +I
Sbjct: 409 ALAHATVAYPFAFRTISISIRKIKKNLLEASLTLGASEALSFLKVELPLIVNGILVASIF 468
Query: 184 AWARGISEVGAILIVAYYPKTAQVL-VMEYFNNYGLRASRPISVILMGISLGIFVVL 239
++A +E+ ++A T L + ++ ++ + +SV+LM IS+ F+++
Sbjct: 469 SFAISAAELATTYMLASPENTTLTLAIYKFISSRQFGPASALSVVLMIISMVSFLLI 525
Score = 71.4 bits (172), Expect = 1e-11
Identities = 54/213 (25%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 40 LVKTIHDPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVI 99
L+ + D + + + A + L +L G+P YV + DF GK ++++I VP V+
Sbjct: 44 LLSVLSDEYYRRVIAFTFVQALLSTLATLAVGIPGAYVFSHYDFPGKRFLRSLITVPFVM 103
Query: 100 PHSVVGIMLLVTFSNA-------ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEH 152
P +V + ++ F + IL ++K II A +F + P + + ++ +
Sbjct: 104 PSVIVALGFIIIFGKSGPLGGLGILYNWKAIILAHVFYNYPVVVRVIASSWERINPHYKE 163
Query: 153 VARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEY 212
A +LGA F I+LP+ LPSI +++ + LI+ Y K A + V
Sbjct: 164 AAMSLGAKGFVVFRKITLPLLLPSILVASLLTFTFCFMSFSIPLILGGY-KYATIEV-AI 221
Query: 213 FNNYGLRASRPISVILMGISLGIFVVLRWLIGK 245
F++ + S L I L I +L ++ K
Sbjct: 222 FSSAMMLLDFKTSSSLALIQLTISAILMYIYAK 254
>gb|AAK41272.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 267
Score = 76.1 bits (184), Expect = 4e-13
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 2/242 (0%)
Query: 6 YTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATAL 65
+ LY+ L Y L +L L+ + I+ SL TAT +
Sbjct: 18 FPLYILVLLAFNSPKYTVLAKFPSLLPVSLTLNNLLTALQGTAFIDPFIKSLETATLVGI 77
Query: 66 ISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA-ILDSYKGII 124
I++ +P GY L+R + ++ V ++P V+GI + V F + +S G+
Sbjct: 78 ITIALAIPAGYGLSRLPRAIAYSIIILLLVTNMMPAIVIGIPIAVDFLKLHLFESVVGLA 137
Query: 125 AAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMA 184
A ++ P A + F ++ LEH AR GA+ FS+ LP+A P IA+ +++
Sbjct: 138 LAQTLITLPLATFILQGTFSSIPIDLEHQARVDGANLFNRLFSVLLPLAAPGIAAAFLIS 197
Query: 185 WARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVIL-MGISLGIFVVLRWLI 243
W E +++ Y T V + + L A S+I + + + F + ++L
Sbjct: 198 WMFSWDEFTYAILLIPYHSTLPVTIYQDVTRGNLLAGIAFSLIFTLPVIILTFALQKYLR 257
Query: 244 GK 245
G+
Sbjct: 258 GE 259
>pir||T44986 probable sulfate/thiosulfate transport protein [imported] -
Haloferax volcanii megaplasmid pHV3 (fragment)
>gi|2459732|gb|AAB71805.1| (U95374) putative
sulfate/thiosulfate transport protein [Haloferax
volcanii]
Length = 112
Score = 76.1 bits (184), Expect = 4e-13
Identities = 37/105 (35%), Positives = 67/105 (63%)
Query: 138 SARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILI 197
+A+ F VD +LE AR+LG ++ + ++LP+A I +G + +AR I E GA L+
Sbjct: 2 TAKTAFDGVDRQLEAAARSLGEDRVGSVRRVTLPLAKQGILAGVTLTFARAIGEFGATLM 61
Query: 198 VAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVLRWL 242
+AYYP+T V + + + GL A+ P++++L+GI++G +++ L
Sbjct: 62 LAYYPRTLPVQIWVSYLSTGLDAAFPVALVLVGIAVGAILLVHAL 106
>pir||B70040 molybdenum transport permease homolog yvgM - Bacillus subtilis
>gi|2635852|emb|CAB15344.1| (Z99121) alternate gene
name: yvsC~similar to molybdenum transport permease
[Bacillus subtilis] >gi|2832789|emb|CAA11713.1|
(AJ223978) putative molybdate transport protein, YvgM
[Bacillus subtilis]
Length = 186
Score = 75.7 bits (183), Expect = 5e-13
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Query: 78 LARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN--------------AILDSYKGI 123
++R F GK+ ++ +P+V+P +VVG +L+V F ++ ++
Sbjct: 1 MSRASFFGKTALETCFMLPLVLPPTVVGFILIVIFGKHSFIGQAIEWIFQQPVIFTWWAA 60
Query: 124 IAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIM 183
+ A V+ P SA+ GF +D ++ A GAS+ + F IS+P+A PS+ +G+I+
Sbjct: 61 VIASAVVAFPLMYQSAKTGFADIDPDIQGAAMVDGASRWKVFIHISVPLAYPSLLTGSIL 120
Query: 184 AWARGISEVGAILIVA 199
+ AR + E GA L+ A
Sbjct: 121 SLARALGEFGATLMFA 136
>pir||H64049 afuB protein homolog - Haemophilus influenzae (strain Rd KW20)
Length = 550
Score = 75.3 bits (182), Expect = 7e-13
Identities = 48/175 (27%), Positives = 91/175 (51%), Gaps = 8/175 (4%)
Query: 52 ALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVT 111
+L N+L+ A A ++ FG+ + Y++ RKDF+GK ++ + + +P +V G+ ++
Sbjct: 348 SLINTLIYAGIAAPLTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGTVAGVSYILA 407
Query: 112 FSNA---ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSI 168
F+NA I + +I +M+ P + +A G +D+ L+ + +L S +T I
Sbjct: 408 FNNAPLYITGTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFI 467
Query: 169 SLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVME-YFNNYGLRASR 222
LP+ P++ S + ++ R ++ V AI+ + TA V YF + G R R
Sbjct: 468 VLPLLKPALLSALVTSFVRAMTTVSAIIFLV----TADTRVYRIYFKSCGRRRIR 518
>gb|AAB67296.1| (U59485) AttB [Agrobacterium tumefaciens]
Length = 285
Score = 75.3 bits (182), Expect = 7e-13
Identities = 49/183 (26%), Positives = 90/183 (48%), Gaps = 3/183 (1%)
Query: 6 YTLYLFAALGSFLIVYIALP--IIVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATAT 63
+ + +F L +FL+V ++L + F Q L + DP + A SL A AT
Sbjct: 39 FLITVFLILPTFLVVPMSLNDGSYLAFPPQGLTLKWYRAYFSDPDWMSATLFSLQVAFAT 98
Query: 64 ALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN-AILDSYKG 122
A+++ G LA+ K L+Q++ P+++PH V+G+ L + FS + ++ G
Sbjct: 99 AIVATTIGTTAALALAKSRLPFKGLLQSLALGPMIVPHVVLGVSLYLVFSPWRVTGTFAG 158
Query: 123 IIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAI 182
+ A ++ P+ + D LE A GA++ ++FF + LP PS+A+ ++
Sbjct: 159 FVLAHTVLAIPYVMIVVGAAVQKFDPSLELAALNCGANRFQSFFLVMLPNIGPSVAAASV 218
Query: 183 MAW 185
A+
Sbjct: 219 FAF 221
>sp|Q57341|AFUB_HAEIN PUTATIVE FERRIC TRANSPORT SYSTEM PERMEASE PROTEIN AFUB
>gi|3212179|gb|AAC21802.1| (U32698) H. influenzae
predicted coding region HI0129 [Haemophilus influenzae
Rd]
Length = 632
Score = 75.3 bits (182), Expect = 7e-13
Identities = 48/175 (27%), Positives = 91/175 (51%), Gaps = 8/175 (4%)
Query: 52 ALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVT 111
+L N+L+ A A ++ FG+ + Y++ RKDF+GK ++ + + +P +V G+ ++
Sbjct: 430 SLINTLIYAGIAAPLTAFFGLLIAYIVVRKDFQGKKSLEFLTMLCFAVPGTVAGVSYILA 489
Query: 112 FSNA---ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSI 168
F+NA I + +I +M+ P + +A G +D+ L+ + +L S +T I
Sbjct: 490 FNNAPLYITGTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFI 549
Query: 169 SLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVME-YFNNYGLRASR 222
LP+ P++ S + ++ R ++ V AI+ + TA V YF + G R R
Sbjct: 550 VLPLLKPALLSALVTSFVRAMTTVSAIIFLV----TADTRVYRIYFKSCGRRRIR 600
>pir||B82310 sulfate ABC transporter, permease protein VC0540 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654968|gb|AAF93708.1| (AE004140) sulfate ABC
transporter, permease protein [Vibrio cholerae]
Length = 287
Score = 74.9 bits (181), Expect = 9e-13
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 1 MGGRDYTLYLFAALGSFLI-VYIALPIIVIFTKQ-ALDFRMLVKTIHDPLVIEALRNSLL 58
+G + + + AL L+ V + +P++ IF + A +DP A+ +L+
Sbjct: 9 VGEKPWVKWSLIALALLLVAVLLLIPLLSIFQQAFANGISAYFSYFNDPDTRHAIGLTLV 68
Query: 59 TATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA--- 115
A T I+L+FGV L +++ R +F G+ + +ID+P + V G++ L+ + +
Sbjct: 69 VALLTVPINLVFGVLLSWLVTRFEFVGRKFLITLIDIPFAVSPVVAGLLYLLLYGTSGWL 128
Query: 116 ----------ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTF 165
I+ ++ GI+ +FV+ PF E A LGAS + F
Sbjct: 129 GEWLYERDLQIMFAWPGIVLVTVFVTCPFVARELIPLMQQQGRSDEEAAVILGASWWQLF 188
Query: 166 FSISLPIALPSIASGAIMAWARGISEVGAILIVA 199
++LP ++ G I+ AR + E GA+ +V+
Sbjct: 189 RRVTLPNIKWALIYGVILTNARAVGEFGAVAVVS 222
>pir||H82428 iron(III) ABC transporter, permease protein VCA0686 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658104|gb|AAF96586.1| (AE004398) iron(III) ABC
transporter, permease protein [Vibrio cholerae]
Length = 700
Score = 74.9 bits (181), Expect = 9e-13
Identities = 50/202 (24%), Positives = 104/202 (50%), Gaps = 8/202 (3%)
Query: 52 ALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVT 111
+L +++ A A I+ LFG+ + YV+ R+ F GK +++ + +P +V G+ ++
Sbjct: 490 SLITTMIYAGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILA 549
Query: 112 FSNA---ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSI 168
F++A + + ++ +M+ + P I S G +D+ L+ + +L AS L+T I
Sbjct: 550 FNDAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYI 609
Query: 169 SLPIALPSIASGAIMAWARGISEVGAILIVA---YYPKTAQVLVMEYFNNYGLRASRPIS 225
LP+ P+I S + ++ R ++ V AI+ + T+ +L YG+ +
Sbjct: 610 ILPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPETRVATSYILNRVEDGEYGIAIA--YG 667
Query: 226 VILMGISLGIFVVLRWLIGKAK 247
+L+ + L I ++ L+G+A+
Sbjct: 668 SVLIVVMLAIILLFDLLVGEAR 689
>pir||T35800 probable polyamine ABC-transporter integral membrane protein -
Streptomyces coelicolor >gi|3413307|emb|CAA20219.1|
(AL031225) putative polyamine ABC-transporter integral
memb rane protein [Streptomyces coelicolor A3(2)]
Length = 266
Score = 73.7 bits (178), Expect = 2e-12
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 21/244 (8%)
Query: 15 GSFLIVYIALPIIVI----FTKQALDF-----RMLVKTIHDPLVIEALRNSLLTATATAL 65
G + Y+ LP +V+ F K F + DP + L SL + AL
Sbjct: 16 GLLTLAYLLLPNVVVTVFSFNKPNGRFNYEWQQFSTDAWKDPCGVAGLCGSLSLSLQIAL 75
Query: 66 ISLL----FGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN--AILDS 119
+ L G + + L R FR + + ++I +P+ +P V+ LL F N A L
Sbjct: 76 WATLGATALGTAIAFALVRYRFRARGAINSLIFLPMAMPEVVMAASLLTLFLNMGAQLGF 135
Query: 120 YKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIAS 179
+ +IA ++F + F + + + +++D +LE A+ L A +TF ++LPIA P IA+
Sbjct: 136 WTILIAHIMFCLS-FVVTAVKARVMSMDPRLEQAAQDLYAGPFQTFVRVTLPIAAPGIAA 194
Query: 180 GAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISLGIFVVL 239
GA++A+A + I+ + + F + P+ + ++G ++ + VL
Sbjct: 195 GALLAFALSFDD----FIITNF-NAGSTVTFPMFVWGSAQRGTPVQINVVGTAMFVIAVL 249
Query: 240 RWLI 243
L+
Sbjct: 250 FVLV 253
>sp|Q53683|YOE1_STRAT HYPOTHETICAL PROTEIN IN OLED 5'REGION (ORF1) >gi|421634|pir||S33182
probable transport protein - Streptomyces antibioticus
(fragment) >gi|296489|emb|CAA80299.1| (Z22577) membrane
protein [Streptomyces antibioticus]
Length = 229
Score = 72.2 bits (174), Expect = 6e-12
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 47 PLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGI 106
PL AL NSLL A ATA +++L P+ YV+AR + + V P ++ I
Sbjct: 18 PLAHAAL-NSLLVALATAAVTVLIATPMAYVMARHRTKAARAATGWVVVSQAFPFVLLII 76
Query: 107 MLLVTFSNA-ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTF 165
L + ++DS G++ + S PFA+ AV +LE A GA ++RT
Sbjct: 77 PLFLVLKRLRLIDSLTGLVLVYVVWSLPFALWMLAGHARAVPAELEEAAAVDGAGRVRTL 136
Query: 166 FSISLPIALPSIASGAIMAWARGISE--VGAILIVAYYPKTAQVLVMEYFNNYGLRAS 221
S+++P+ P IA+ A+ A+ +E +L+ + + +T V++ + G+ S
Sbjct: 137 TSVTVPLLAPGIAATALFAFVTAWNEFFFALVLLKSPHRQTLPVVLTHFIGAEGVPTS 194
>pir||F71934 molybdate ABC transporter, permease - Helicobacter pylori (strain
J99) >gi|4154951|gb|AAD05996.1| (AE001476) Molybdate ABC
transporter, permease [Helicobacter pylori J99]
Length = 224
Score = 72.2 bits (174), Expect = 6e-12
Identities = 44/160 (27%), Positives = 79/160 (48%), Gaps = 14/160 (8%)
Query: 53 LRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTF 112
+R S A T LI L G+ LGY L+ K SL + ++ +P+V+P SV+G LL+ F
Sbjct: 9 MRLSFSLALITTLILLPIGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFYLLLIF 68
Query: 113 SNA--------------ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLG 158
S + ++ S++G+I + S PF ++ + +++ L+ + +LG
Sbjct: 69 SPSSFLGAFLQDVLNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSLKEASYSLG 128
Query: 159 ASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIV 198
+ T F + LP PS+ I + I E G ++++
Sbjct: 129 KGEYYTLFFVLLPNIKPSVLMAIITTFMHTIGEFGVVMML 168
>gi|10955067 agtD [Agrobacterium tumefaciens]
>gi|6689867|gb|AAF23880.1|AF117204_5 (AF242881) agtD
[Agrobacterium tumefaciens]
Length = 281
Score = 72.2 bits (174), Expect = 6e-12
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 3/224 (1%)
Query: 27 IVIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGK 86
++IF R + P + A SL AT +SLL R F +
Sbjct: 39 VLIFPPPGYSLRWFETILGSPEWMGAALTSLRIGVATCALSLLLATLAVIGFGRGRFLFR 98
Query: 87 SLVQAIIDVPIVIPHSVVGIMLLVTFSNA-ILDSYKGIIAAMLFVSAPFAINSARDGFLA 145
++A++ P+ +P V + +TFS ++D+ GI+ A + P A + +
Sbjct: 99 EALEAVVQFPLSVPAVVFALGAYLTFSKVGLVDTEAGIVIAHTVLIFPVVFLVASATYSS 158
Query: 146 VDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISE-VGAILIVAYYPKT 204
+D L A +LGA+ +TF +I P+ LP +A G ++A E V +I + KT
Sbjct: 159 IDPSLSLAASSLGANAWQTFRTIVFPLLLPGVAIGGLLAMLLSFDESVASIFLSDLSVKT 218
Query: 205 AQVLVMEYFNNYGLRASRPISVILMGISLGIFVV-LRWLIGKAK 247
+ E S +S +L+G++ + +V + +++G+ K
Sbjct: 219 LPRKLWEGIRFNTSPESAAVSALLLGVTCTVIMVGMAFILGRRK 262
>pir||B64579 molybdenum ABC transporter, permease protein - Helicobacter pylori
(strain 26695) >gi|2313585|gb|AAD07542.1| (AE000562)
molybdenum ABC transporter, permease protein (modB)
[Helicobacter pylori 26695]
Length = 224
Score = 71.8 bits (173), Expect = 7e-12
Identities = 44/160 (27%), Positives = 79/160 (48%), Gaps = 14/160 (8%)
Query: 53 LRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTF 112
+R S A T LI L G+ LGY L+ K SL + ++ +P+V+P SV+G LL+ F
Sbjct: 9 MRLSFSLALITTLILLPVGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFYLLLIF 68
Query: 113 SNA--------------ILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLG 158
S + ++ S++G+I + S PF ++ + +++ L+ + +LG
Sbjct: 69 SPSSFLGAFLQDVLNVKLVFSFQGLILGSVIFSLPFMVSPIKSALISLPASLKEASYSLG 128
Query: 159 ASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIV 198
+ T F + LP PS+ I + I E G ++++
Sbjct: 129 KGEYYTLFFVLLPNIKPSLLMAIITTFTHTIGEFGVVMML 168
>pir||E72543 probable ABC transporter permease protein APE1633 - Aeropyrum
pernix (strain K1) >gi|5105321|dbj|BAA80634.1|
(AP000062) 270aa long hypothetical ABC transporter
permease protein [Aeropyrum pernix]
Length = 270
Score = 71.8 bits (173), Expect = 7e-12
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 11/210 (5%)
Query: 12 AALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPL----------VIEALRNSLLTAT 61
A L S+++V +A+ I+ FT + + + T L EA S+
Sbjct: 18 AVLVSWILVPLAISIVYAFTPLDVYYSNAILTTSFTLDHVKTLWILGAGEAFLRSVAVGA 77
Query: 62 ATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSN-AILDSY 120
T IS L G+P GY LAR F G+ V+ I + P V+ + LL TF N + D+
Sbjct: 78 MTVGISFLLGLPGGYALARYVFPGRDAVKLAIIATRMFPIIVISVSLLKTFFNLGLNDTL 137
Query: 121 KGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASG 180
G+ A ++ PF + F + LE G S + F I+LP+A P + +
Sbjct: 138 IGLALAHTAMALPFVVIITGSIFGGIPRDLEEAGMIFGLSSIMVFLRITLPLAAPGLTAA 197
Query: 181 AIMAWARGISEVGAILIVAYYPKTAQVLVM 210
+ + +EV ++ +T ++
Sbjct: 198 GMFTFLLSWNEVFMASVLTLVNRTLPAFIL 227
>pir||G83620 probable permease of ABC transporter PA0204 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9946039|gb|AAG03593.1|AE004458_8 (AE004458) probable
permease of ABC transporter [Pseudomonas aeruginosa]
Length = 269
Score = 71.8 bits (173), Expect = 7e-12
Identities = 74/252 (29%), Positives = 117/252 (46%), Gaps = 17/252 (6%)
Query: 6 YTLYLFAALGSFLIVYI--ALPIIVIFTKQALDFRMLVKTIHDPLVIEALRNSLL----- 58
+ LYL+A + L+VY A ++T +LD+ + + +A NSLL
Sbjct: 26 FYLYLYAPI-LVLVVYSFNANQSATVWTGFSLDWYRAA--FANQALRQAAGNSLLIAVCA 82
Query: 59 TATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNAILD 118
+A ATA+ +L LG K FRG L I +P+V+P VVG+ L FS L
Sbjct: 83 SAAATAIATL---AALGTSRGAK-FRGLRLSMGAIMLPLVLPEIVVGVATLALFSTVGLS 138
Query: 119 -SYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSI 177
Y +I A PFA R +D LE A L A RT ++LP+ P I
Sbjct: 139 LGYGNLIIAHTVFCIPFAYLPIRARLDDMDLSLEQAAADLYAGPWRTLRKVTLPLLAPGI 198
Query: 178 ASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRAS-RPISVILMGISLGIF 236
SG ++A+ + ++V+ T + + G+ +S +++G+S+ IF
Sbjct: 199 FSGLMLAFIVSLDNFVISMMVSQAGTTTLPIFIFGLLRMGVTPDVNAVSTLILGVSV-IF 257
Query: 237 VVLRWLIGKAKS 248
V L +L+GK ++
Sbjct: 258 VSLSYLLGKPRA 269
>gb|AAG19354.1| (AE005030) iron transporter-like protein; SfuB [Halobacterium sp.
NRC-1]
Length = 537
Score = 71.0 bits (171), Expect = 1e-11
Identities = 51/191 (26%), Positives = 93/191 (47%), Gaps = 8/191 (4%)
Query: 55 NSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL---VT 111
NSL A A A ++ + +P+ AR R + + V IP V+ + L+
Sbjct: 341 NSLKVAVAAAGVATVLALPVAGYAARSSSRLSMVSDRLTYVGYAIPGVVIALSLVFLSTE 400
Query: 112 FSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLP 171
F +++ + ++ A + P A+ S R L VD KL ARTLG S F S++LP
Sbjct: 401 FVQSLVKTVPLLVFAYVVRFLPQAVGSVRSSVLQVDPKLTEAARTLGRSSTDAFRSVTLP 460
Query: 172 IALPSIASGAIMAWARGISEVGAILI---VAYYPKTAQVLVMEYFNNYGLRASRPISVIL 228
+ P +A+GA + + + E+ A L+ + + + + ++ +YG A+ +++L
Sbjct: 461 LIAPGVAAGAALVFLTTMKELPATLMLRPIGFETLVSYIWLVRGAGSYG--AAAVPALVL 518
Query: 229 MGISLGIFVVL 239
+G+S VV+
Sbjct: 519 VGVSALSMVVI 529
>pir||F72555 probable molybdenum transport system permease protein APE1730 -
Aeropyrum pernix (strain K1) >gi|5105418|dbj|BAA80731.1|
(AP000062) 555aa long hypothetical molybdenum transport
system permease protein [Aeropyrum pernix]
Length = 555
Score = 70.6 bits (170), Expect = 2e-11
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 21/222 (9%)
Query: 31 TKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQ 90
T Q + + + D V+ A RNS+ A +LIS++ V Y + R R +
Sbjct: 317 TPQGFTLDHMREVLSDSRVVNAFRNSVTYALLASLISIVIAVTTSYSVERLRTRLSEPLD 376
Query: 91 AIIDVPIVIPHSVVGIMLLVTFSNA-----ILDSYK----GIIAAMLFVSAPFAINSARD 141
+ +PI +P + + +L+ FS + +LD Y+ ++ A +PFA +A
Sbjct: 377 VLATIPIALPGLALALGILIMFSTSFTRGTLLDPYEFPALFLVLAYSVRKSPFATRAAFA 436
Query: 142 GFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVA-- 199
G + + LE A LGA +LR I++P+ ++ G ++ + ++EV + +
Sbjct: 437 GLKHLHKSLEEAAMNLGARRLRVIRDITVPLIGINLLGGVLLTFVYSVTEVSTSITIGGL 496
Query: 200 ---YYPKTAQVLVMEYF-NNYG----LRASRPISVILMGISL 233
Y P T ++ +Y YG + + I VILM I +
Sbjct: 497 NEDYSPIT--YIIYDYVTGGYGGGAFVHLAASIVVILMAIQV 536
>pir||A72786 probable transport system permease protein APE0270 - Aeropyrum
pernix (strain K1) >gi|5103666|dbj|BAA79187.1|
(AP000058) 233aa long hypothetical transport system
permease protein [Aeropyrum pernix]
Length = 233
Score = 70.2 bits (169), Expect = 2e-11
Identities = 60/216 (27%), Positives = 101/216 (45%), Gaps = 22/216 (10%)
Query: 46 DPLVIEALRNSLLTATATALISLLFGVPLG----YVLARKDFRGKSLVQAIIDVPIVIPH 101
D + E R SL+ + ++ IS + V L Y +AR++ R L+ + + + IP
Sbjct: 9 DLFLEERFRRSLVLSLGSSTISSVLAVTLATAPAYAMARQEGRLTRLISQLHLLLLSIPP 68
Query: 102 SVVGIMLLVTFS-----NAILD------SYKGIIAAMLFVSAPFAINSARDGFLAVDEKL 150
+G L+ F+ N+I + S K +I A L V+ P A++ F V +L
Sbjct: 69 VGLGTAALILFTRYPPLNSISETLGLFFSPKAVILAQLLVTTPIAVSMLTGVFSMVPREL 128
Query: 151 EHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGAILIVA-YYPKTAQVLV 209
E A GA +L+ I LP++LP I S + + R + E GA L++A P + L
Sbjct: 129 EEAAEAYGAGRLQILIRIVLPLSLPGILSALAVTFFRALGEFGATLVLAGNIPGRTETLP 188
Query: 210 MEYFNNYGLRASRPIS-----VILMG-ISLGIFVVL 239
+ +N L S V+ +G ++LG+ +L
Sbjct: 189 LALYNAISLADVETASAIYTLVLAVGLVTLGVHTLL 224
>pir||B72279 hypothetical protein TM1233 - Thermotoga maritima (strain MSB8)
>gi|4981787|gb|AAD36308.1|AE001779_10 (AE001779) sugar
ABC transporter, permease protein, putative [Thermotoga
maritima]
Length = 265
Score = 69.9 bits (168), Expect = 3e-11
Identities = 46/150 (30%), Positives = 74/150 (48%), Gaps = 1/150 (0%)
Query: 56 SLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTFSNA 115
S+ A + IS L G+P GY L R F GK++++ + + IP VV + L+V +
Sbjct: 68 SVQVALISIGISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVVLYMRF 127
Query: 116 IL-DSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIAL 174
L D+ G+ A + PF + F + + E G S+ + F I+LP+AL
Sbjct: 128 NLADTTLGVALAHASMILPFVVLITSSVFSGISVEYEEAGMVFGLSRFQAFIRITLPLAL 187
Query: 175 PSIASGAIMAWARGISEVGAILIVAYYPKT 204
P +A+ AI A+ +EV A I+ +T
Sbjct: 188 PGLAASAIFAFIMSWNEVFASSILTLTNRT 217
>pir||A83608 polyamine transport protein PotI PA0304 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946149|gb|AAG03693.1|AE004468_5 (AE004468)
polyamine transport protein PotI [Pseudomonas
aeruginosa]
Length = 289
Score = 69.9 bits (168), Expect = 3e-11
Identities = 65/245 (26%), Positives = 118/245 (47%), Gaps = 25/245 (10%)
Query: 18 LIVYIALPIIVIFTKQALDF---------RMLVKTIHDPLVIEALRNSLLTATATALISL 68
L +Y+ + I+VI++ A + V + + ++ ++ SL A TA S+
Sbjct: 16 LFIYLPMLILVIYSFNASKLVTVWGGWSVKWYVGLLDNTQLVSSVGRSLEIAFYTAFSSV 75
Query: 69 LFGVPLGYVLAR-KDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTF-SNAILDSY---KGI 123
G +VL R FRG++L ++ P+V+P + G+ LL+ F + A L + +GI
Sbjct: 76 FLGTLAAFVLTRIPRFRGRTLFGGMVTAPLVMPEVITGLSLLLLFVAMAQLIGWPQERGI 135
Query: 124 IAAML----FVSAPFAIN-SARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIA 178
+ + F S+ A+ SAR +D +E A LGA + F I++P+ PS+A
Sbjct: 136 VTIWIAHTSFCSSYVAVVVSAR--LRELDLSIEEAAMDLGAKPWKVFLLITIPMIAPSLA 193
Query: 179 SGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVI--LMGISLGIF 236
+G +M++A + ++ V+ T L ME F+ L I+ + L+ +S+ +F
Sbjct: 194 AGGMMSFALSLDDLVLASFVSGPGST--TLPMEVFSAVRLGVKPEINAVASLILLSVSLF 251
Query: 237 VVLRW 241
W
Sbjct: 252 TFFAW 256
>sp|P71338|HITB_HAEIN IRON(III)-TRANSPORT SYSTEM PERMEASE PROTEIN HITB
Length = 506
Score = 69.5 bits (167), Expect = 4e-11
Identities = 57/224 (25%), Positives = 99/224 (43%), Gaps = 10/224 (4%)
Query: 16 SFLIVYIALPII-----VIFTKQALDFRMLVKTIHDPLVIEALRNSLLTATATALISLLF 70
+ LI+ I LP+ VI + V+ + P + E L N++L + ++
Sbjct: 10 TLLIILIGLPLCLPFLYVILRATEVGLTRSVELLFRPRMAELLSNTMLLMVCVTIGAISL 69
Query: 71 GVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLL-VTFSNAILDSYKGIIAAMLF 129
G ++L R F GK+ + + +P+ IP V G + +TF ++ + G I M
Sbjct: 70 GTFCAFLLERYRFFGKAFFEVAMTLPLCIPAFVSGFTWISLTFR---VEVFWGTIGIMTL 126
Query: 130 VSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGI 189
S P A +D LE V+ +LG S + TF+ P P+I S ++ +
Sbjct: 127 SSFPLAYLPVSAILKRLDRSLEEVSLSLGKSPVYTFWYAISPQLKPAIGSSILLIALHML 186
Query: 190 SEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISVILMGISL 233
E GA+ I+ Y T + EY ++ + +S +LM I +
Sbjct: 187 VEFGAVSILNYQTFTTAIF-QEYEMSFNNSTAALLSAVLMAICI 229
>dbj|BAB07047.1| (AP001518) molybdenum transport system (permease) [Bacillus
halodurans]
Length = 176
Score = 69.5 bits (167), Expect = 4e-11
Identities = 36/125 (28%), Positives = 69/125 (54%), Gaps = 14/125 (11%)
Query: 89 VQAIIDVPIVIPHSVVGIMLLV--------------TFSNAILDSYKGIIAAMLFVSAPF 134
+ ++ +P+V+P SVVG +L++ F I+ ++ + A V+ P
Sbjct: 1 MDTVLLLPLVLPPSVVGFLLIIIFGRQSPIGQGIEWVFQQPIMFTWWAAVIAATVVAFPL 60
Query: 135 AINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLPIALPSIASGAIMAWARGISEVGA 194
SA+ GF +D ++E +R GA++ + F +++P+A +I +GAI+++AR + E GA
Sbjct: 61 MYQSAKSGFETIDREIEDASRVDGANERQVFLLVTVPLASRAIVAGAILSFARALGEFGA 120
Query: 195 ILIVA 199
L+ A
Sbjct: 121 TLMFA 125
>dbj|BAB07407.1| (AP001519) sugar transport system (permease) [Bacillus halodurans]
Length = 273
Score = 69.5 bits (167), Expect = 4e-11
Identities = 49/151 (32%), Positives = 82/151 (53%), Gaps = 5/151 (3%)
Query: 36 DFRMLVKTIHDPLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDV 95
+++ ++ T PL + L NS++ A ++LLF GY LAR FRG+ + ++
Sbjct: 55 NYQYIIST--QPLFVRWLMNSVIIAVVGTALNLLFNSMAGYALARLSFRGRKSMFILVLA 112
Query: 96 PIVIPHSVVGI-MLLVTFSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVA 154
++IP V I L+ L+SY+G+I + V+A F I R F+ +++E A
Sbjct: 113 VLMIPGQVTMIPNYLILRELGWLNSYEGMIVPAM-VNATF-IFMMRQFFVNFPKEVEEAA 170
Query: 155 RTLGASKLRTFFSISLPIALPSIASGAIMAW 185
G S++ TFF I LP+A P++A+ AI +
Sbjct: 171 AMDGLSQMGTFFRIVLPMAKPALAAQAIFVF 201
>pir||F83194 polyamine transport protein PotC PA3609 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949766|gb|AAG06997.1|AE004781_5 (AE004781)
polyamine transport protein PotC [Pseudomonas
aeruginosa]
Length = 256
Score = 69.1 bits (166), Expect = 5e-11
Identities = 53/200 (26%), Positives = 96/200 (47%), Gaps = 18/200 (9%)
Query: 4 RDYTLYLFAALGSFLIVYIALPIIVIFTKQALDFRMLVKTIHDPL-----------VIEA 52
R Y L+ AL +L +Y+ L I+V+++ D R+ + + L +++A
Sbjct: 3 RPYLLWSATAL-VYLFLYVPLVIVVLYSFN--DSRLNAEWVGFTLDWYRKLFGNRDMLQA 59
Query: 53 LRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGIMLLVTF 112
NSL+ A +A ++ L G G L R R ++ ++ PI IP ++G+ L++ F
Sbjct: 60 AANSLVIALVSASVATLLGTLAGVALHRFKLR---VLPLLVLTPIAIPELLMGVSLVIFF 116
Query: 113 SNAILD-SYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFFSISLP 171
+ + A + S F + +DE L AR LGA+ ++F ++LP
Sbjct: 117 IGLNMSLGMLSVTLAHITFSVGFVALVVQARMSGMDESLTEAARDLGATPWQSFHLVTLP 176
Query: 172 IALPSIASGAIMAWARGISE 191
+ +P I +GA+MA+ I +
Sbjct: 177 LIMPGIVAGALMAFTLSIDD 196
>pir||E83060 iron (III)-transport system permease HitB PA4688 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9950945|gb|AAG08075.1|AE004882_6 (AE004882) iron
(III)-transport system permease HitB [Pseudomonas
aeruginosa]
Length = 512
Score = 68.7 bits (165), Expect = 6e-11
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 7/196 (3%)
Query: 47 PLVIEALRNSLLTATATALISLLFGVPLGYVLARKDFRGKSLVQAIIDVPIVIPHSVVGI 106
P V L N+L L+S L G+ L + + R D + ++ +P IP + V
Sbjct: 52 PYVFRLLGNTLWLMFGVTLLSALLGLALAWCVERSDLPARRFWNVVLCLPFAIP-AFVSS 110
Query: 107 MLLVTFSNAILDSYKGIIAAMLFVSAPFAINSARDGFLAVDEKLEHVARTLGASKLRTFF 166
V+ S + + G I M P +D LE AR LG S+ + F
Sbjct: 111 FTWVSLS-PMYEGLGGAILVMTMSKYPLVYLPVAATLRGIDPSLEESARMLGLSRRQVFL 169
Query: 167 SISLPIALPSIASGAIMAWARGISEVGAILIVAYYPKTAQVLVMEYFNNYGLRASRPISV 226
++LP+ P++A+ ++ + E GA+ I+ Y Q + + L S +
Sbjct: 170 RVTLPLLRPTLAATGLLVALHMLVEFGALSILRY-----QTFTTAIYQEFELEFSNATAA 224
Query: 227 ILMGISLGIFVVLRWL 242
+L + L + +L WL
Sbjct: 225 MLSSVLLALCFLLLWL 240
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.329 0.144 0.407
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77905084
Number of Sequences: 2977
Number of extensions: 2758703
Number of successful extensions: 11246
Number of sequences better than 1.0e-10: 94
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 11091
Number of HSP's gapped (non-prelim): 119
length of query: 248
length of database: 189,106,746
effective HSP length: 54
effective length of query: 194
effective length of database: 156,788,448
effective search space: 30416958912
effective search space used: 30416958912
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.8 bits)
S2: 164 (68.3 bits)