BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0103 (PAB0103) DE:ABC transporter, ATP-binding protein
(344 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyroc... 670 0.0
pir||C71237 probable transport-ATP binding protein - Pyrococcus ... 522 e-147
sp|Q58762|YD67_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 263 2e-69
pir||C69223 anion permease - Methanobacterium thermoautotrophicu... 260 2e-68
pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyroco... 259 3e-68
pir||H71006 probable ATP-binding transport protein - Pyrococcus ... 257 2e-67
gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein Ma... 242 4e-63
gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ... 242 5e-63
pir||B75207 multiple sugar-binding transport ATP-binding protein... 241 1e-62
pir||G72543 probable ABC transporter ATP-binding protein APE1635... 241 1e-62
pir||C71220 probable sugar-binding transport ATP-binding protein... 239 4e-62
pir||D75187 probable maltose/maltodextrin transport ATP-binding ... 238 5e-62
pir||H71241 probable multiple sugar-binding transport ATP-bindin... 238 9e-62
pir||F72756 probable multiple sugar-binding transport ATP-bindin... 238 9e-62
gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus] 235 8e-61
gi|11497712 sulfate ABC transporter, ATP-binding protein (cysA) ... 234 1e-60
emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ... 233 2e-60
pir||F72510 probable multiple sugar-binding transport ATP-bindin... 233 2e-60
pir||H72555 probable transporter ATP-binding protein APE1732 - A... 232 4e-60
pir||H72272 sugar ABC transporter, ATP-binding protein - Thermot... 227 1e-58
pir||A71243 probable maltose/maltodextrin transport ATP-binding ... 227 1e-58
pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyroc... 227 1e-58
pir||E72378 sugar ABC transporter, ATP-binding protein - Thermot... 226 3e-58
gi|11499200 spermidine/putrescine ABC transporter, ATP-binding p... 226 4e-58
pir||A72279 sugar ABC transporter, ATP-binding protein - Thermot... 224 9e-58
sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 219 4e-56
gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomi... 219 4e-56
gi|10955070 agtA [Agrobacterium tumefaciens] >gi|6689864|gb|AAF2... 218 7e-56
gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [S... 217 2e-55
emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermop... 216 3e-55
pir||A70018 multiple sugar ABC transporter (ATP-bindin) homolog ... 216 3e-55
sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT A... 215 4e-55
pir||H72690 probable spermidine/putrescine transport ATP-binding... 215 6e-55
sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN PO... 215 8e-55
pir||A72261 spermidine/putrescine ABC transporter, ATP-binding p... 214 1e-54
pir||E71123 probable sugar transport ATP-binding protein - Pyroc... 213 2e-54
emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-b... 212 4e-54
gi|10954682 probable mikimopine transporter gene~similar to potA... 212 4e-54
dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens] 212 7e-54
pir||H83609 sulfate transport protein CysA PA0280 [imported] - P... 211 9e-54
gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protei... 211 1e-53
dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding pr... 210 1e-53
dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding pr... 210 3e-53
emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding ... 209 3e-53
pir||E75412 spermidine/putrescine ABC transporter, ATP-binding p... 209 4e-53
pir||D75308 sugar ABC transportor, ATP-binding protein - Deinoco... 209 4e-53
pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [... 208 6e-53
pir||F82201 spermidine/putrescine ABC transporter, ATP-binding p... 208 7e-53
gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus] 208 7e-53
gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus ... 207 2e-52
gi|11466425 probable transport protein [Mesostigma viride] >gi|7... 206 2e-52
pir||H83240 probable ATP-binding component of ABC transporter PA... 206 3e-52
sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEI... 206 4e-52
sp|Q00752|MSMK_STRMU MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDIN... 206 4e-52
pir||T35802 probable polyamine ABC-transporter ATP-binding prote... 205 5e-52
pir||E83248 probable ATP-binding component of ABC transporter PA... 205 6e-52
pir||B82185 glycerol-3-phosphate ABC transporter, ATP-binding pr... 204 1e-51
gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspi... 203 2e-51
pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 ... 203 2e-51
pir||G81344 ABC transport system ATP-binding protein Cj0732 [imp... 202 6e-51
gb|AAC12799.1| (U67851) ChtG [Agrobacterium sp.] >gi|3153868|gb|... 201 7e-51
gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens] 201 1e-50
pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA06... 201 1e-50
gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [S... 201 1e-50
sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 201 1e-50
sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 201 1e-50
pir||A70180 spermidine/putrescine ABC transporter, ATP-binding p... 201 1e-50
gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport syst... 201 1e-50
pir||E71296 probable spermidine/putrescine ABC transporter, ATP-... 200 2e-50
pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H... 200 2e-50
gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Th... 199 3e-50
pir||B83571 probable ATP-binding component of ABC transporter PA... 199 4e-50
pir||T34595 ABC-transporter ATP-binding protein - Streptomyces c... 199 5e-50
pir||G83605 probable ATP-binding component of ABC transporter PA... 199 5e-50
pir||T46950 probable ATPase component of 2-aminoethylphosphonate... 198 6e-50
gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding p... 198 8e-50
sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK) >... 197 2e-49
pir||G83607 polyamine transport protein PotG PA0302 [imported] -... 197 2e-49
sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 196 2e-49
pir||C83353 probable ATP-binding component of ABC maltose/mannit... 196 3e-49
pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097... 196 4e-49
sp|P10907|UGPC_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT ATP-BINDI... 195 6e-49
pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protei... 195 6e-49
pir||S75652 ABC-type transport protein sll1878 - Synechocystis s... 195 6e-49
dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.] 195 6e-49
dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding ... 195 6e-49
pir||F71279 probable sugar ABC transporter, ATP-binding protein ... 195 7e-49
pir||C81179 spermidine/putrescine ABC transporter, ATP-binding p... 194 9e-49
sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 194 2e-48
pir||MMECMK inner membrane protein malK - Escherichia coli >gi|4... 193 2e-48
pir||D83194 polyamine transport protein PotA PA3607 [imported] -... 193 2e-48
pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879... 192 4e-48
sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING... 192 5e-48
pir||G81926 probable polyamine permease ATP-binding protein NMA0... 192 6e-48
gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other ... 191 1e-47
sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 190 1e-47
pir||F64751 probable ABC-type transport protein b0262 - Escheric... 190 2e-47
emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli] 190 2e-47
sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING ... 190 2e-47
sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 190 2e-47
sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTE... 190 2e-47
gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica] 189 3e-47
emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [... 189 3e-47
pir||T45204 probable sugar ABC transporter ugpC [imported] - Myc... 189 5e-47
pir||C70693 probable ugpC protein - Mycobacterium tuberculosis (... 189 5e-47
pir||E70952 probable sugC protein - Mycobacterium tuberculosis (... 189 5e-47
pir||A83621 probable ATP-binding component of ABC transporter PA... 189 5e-47
sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 188 7e-47
pir||T35450 ABC transporter ATP binding protein - Streptomyces c... 188 9e-47
sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA ... 187 1e-46
gb|AAB88581.1| (M93437) CycB [Thermus thermophilus] 187 2e-46
pir||G81012 spermidine/putrescine ABC transporter, ATP-binding p... 187 2e-46
pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC... 186 3e-46
gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPa... 186 3e-46
gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae] 186 3e-46
pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding pr... 186 3e-46
gb|AAA23639.1| (M32101) cysA [Escherichia coli] 186 4e-46
dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-bindin... 186 4e-46
pir||E75564 ABC transporter, ATP-binding protein - Deinococcus r... 186 4e-46
pir||E69162 sulfate transport system ATP-binding - Methanobacter... 185 5e-46
gi|11467821 probable transport protein [Nephroselmis olivacea] >... 185 5e-46
gi|7524830 sulfate transport system permease protein [Chlorella ... 185 8e-46
pir||E70943 probable ABC-type sugar transport protein - Mycobact... 184 1e-45
gi|11466697 mbpX [Marchantia polymorpha] >gi|126794|sp|P10091|CY... 184 1e-45
pir||E82302 iron(III) ABC transporter, ATP-binding protein VC061... 184 1e-45
pir||S63613 probable ATP-binding protein cymD - Klebsiella oxyto... 183 2e-45
pir||H82440 ABC transporter, ATP-binding protein VCA0602 [import... 183 3e-45
gb|AAG20071.1| (AE005086) spermidine/putrescine ABC transporter;... 182 4e-45
gb|AAF91339.1|AF249729_1 (AF249729) ATPase OpuCA [Listeria monoc... 182 5e-45
emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycob... 182 7e-45
pir||T03479 probable ABC transporter ATP-binding protein - Rhodo... 182 7e-45
pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [im... 182 7e-45
sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK ... 181 9e-45
pir||S05329 inner membrane protein malK - Salmonella typhimurium 180 2e-44
gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidu... 180 3e-44
sp|Q9Z3R9|AGLK_RHIME ALPHA-GLUCOSIDES TRANSPORT ATP-BINDING PROT... 179 5e-44
emb|CAA67415.1| (X98917) orf4 [Methanopyrus kandleri] 178 6e-44
pir||T36641 probable ABC-type transport system ATP-binding chain... 178 8e-44
gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC1... 177 1e-43
gb|AAB59057.1| (J01648) malK [Escherichia coli] 176 3e-43
sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT... 176 4e-43
dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum] 176 4e-43
sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA... 175 9e-43
pir||T47062 hypothetical protein [imported] - Yersinia pestis >g... 174 2e-42
sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC >... 173 2e-42
gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas... 172 5e-42
pir||T10888 iron utilization protein C - Haemophilus influenzae ... 172 6e-42
gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ... 172 6e-42
sp|P44513|HITC_HAEIN IRON(III)-TRANSPORT ATP-BINDING PROTEIN HIT... 171 1e-41
gb|AAC21775.1| (U32695) iron(III) ABC transporter, ATP-binding p... 171 1e-41
pir||T43920 YfuC protein [imported] - Yersinia enterocolitica >g... 171 1e-41
pir||F81929 probable iron-uptake permease ATP-binding protein NM... 170 2e-41
gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti] 168 1e-40
sp|P21410|SFUC_SERMA IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFU... 166 5e-40
pir||T36808 probable sugar transport system ATP-binding chain - ... 165 8e-40
emb|CAB61861.1| (AL133252) putative ABC-transporter ATP binding ... 165 8e-40
pir||F83203 probable ATP-binding component of ABC transporter PA... 164 1e-39
dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein)... 162 4e-39
pir||T36154 probable ABC-type transport system ATP-binding prote... 161 9e-39
dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans] 161 2e-38
gi|11497707 nitrate ABC transporter, ATP-binding protein (nrtC-1... 159 3e-38
gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Strepto... 159 4e-38
pir||S77084 ABC-type transport protein sll0739 - Synechocystis s... 159 6e-38
sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 158 1e-37
gb|AAD29279.1|AF112365_2 (AF112365) ProVL [Streptomyces coelicol... 157 1e-37
pir||T44856 molybdenum transport ATPase (EC 3.6.1.-) [imported] ... 155 9e-37
pir||G83159 probable ATP-binding component of ABC transporter PA... 154 1e-36
gb|AAB63561.1| (U33937) FbpC [Neisseria gonorrhoeae] >gi|1588874... 152 4e-36
pir||H83412 molybdenum transport protein ModC PA1861 [imported] ... 151 1e-35
sp|Q08381|MODC_RHOCA MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MO... 148 1e-34
sp|P95155|MODC_MYCTU MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MO... 148 1e-34
pir||H82425 molybdenum ABC transporter, ATP-binding protein VCA0... 146 3e-34
sp|P33360|YEHX_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 146 3e-34
gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, A... 146 3e-34
sp|P31548|YABJ_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 146 4e-34
sp|P37732|MODD_AZOVI MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MO... 145 7e-34
pir||H81391 amino-acid ABC transporter ATP-binding protein Cj046... 145 7e-34
pir||H72356 amino acid ABC transporter, ATP-binding protein - Th... 143 2e-33
pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (st... 143 3e-33
pir||S40582 hypothetical protein - Escherichia coli >gi|216486|d... 142 6e-33
pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AA... 142 6e-33
pir||D83356 probable ATP-binding component of ABC transporter PA... 142 6e-33
pir||H64716 ABC transporter, ATP-binding protein - Helicobacter ... 140 2e-32
pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL -... 139 4e-32
sp|P39459|NASD_KLEPN NITRATE TRANSPORT PROTEIN NASD >gi|2642137|... 138 7e-32
gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori] 138 1e-31
pir||F71800 ABC transporter, ATP-binding protein - Helicobacter ... 138 1e-31
pir||C82266 ABC transporter, ATP-binding protein VC0907 [importe... 138 1e-31
sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64... 136 5e-31
gb|AAA64722.1| (M20568) ORF 10 [Azotobacter vinelandii] 135 6e-31
gi|11499407 ABC transporter, ATP-binding protein [Archaeoglobus ... 134 1e-30
sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 134 2e-30
pir||G71363 probable amino acid ABC transporter, ATP-binding pro... 134 2e-30
pir||D70020 ABC transporter (ATP-binding protein) homolog yusC -... 133 2e-30
sp|P27675|GLNQ_BACST GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLN... 132 4e-30
pir||S75100 ABC transport protein - Synechocystis sp. (strain PC... 132 5e-30
pir||G71905 probable ABC transporter, ATP-binding protein - Heli... 131 9e-30
pir||F71849 amino acid ABC transporter, ATP-binding protein - He... 131 9e-30
pir||D81435 probable iron-uptake ABC transport system ATP-bindin... 131 9e-30
gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein ... 131 1e-29
pir||C64609 ABC transporter, ATP-binding protein - Helicobacter ... 131 2e-29
emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aur... 131 2e-29
pir||C82957 probable ATP-binding component of ABC transporter PA... 131 2e-29
sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 130 2e-29
sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLN... 130 3e-29
sp|P42423|YXDL_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 129 5e-29
pir||H72301 ABC transporter, ATP-binding protein - Thermotoga ma... 129 5e-29
pir||D72492 probable ABC transporter ATP-binding protein APE2579... 129 6e-29
pir||B75076 daunorubicin resistance ATP-binding protein drra PAB... 129 6e-29
dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein)... 129 6e-29
sp|P47433|Y187_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 128 8e-29
pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1... 128 8e-29
pir||C64666 glutamine transport protein glnQ - Helicobacter pylo... 128 1e-28
gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. al... 127 2e-28
pir||E81936 probable amino acid permease ATP-binding protein NMA... 127 2e-28
sp|P45769|YHDZ_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP... 126 3e-28
sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 126 3e-28
pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0... 126 3e-28
pir||F81947 probable amino acid permease ATP-binding protein NMA... 126 3e-28
dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP... 126 3e-28
pir||G69633 glutamine transport protein glnQ - Bacillus subtilis... 126 4e-28
pir||A70158 ABC transporter, ATP-binding protein homolog - Lyme ... 126 4e-28
pir||G70800 probable ABC transporter ATP-binding protein - Mycob... 126 4e-28
dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans] 126 4e-28
sp|P75264|Y187_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PR... 125 7e-28
dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein)... 125 7e-28
pir||F81348 ABC transport system ATP-binding protein Cj0774c [im... 125 9e-28
gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus ... 124 1e-27
sp|Q47538|TAUB_ECOLI TAURINE TRANSPORT ATP-BINDING PROTEIN TAUB ... 124 1e-27
pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricu... 124 1e-27
pir||C82063 probable thiamin ABC transporter, ATP-binding protei... 124 1e-27
dbj|BAB04472.1| (AP001509) ABC transporter (ATP-binding protein)... 124 1e-27
sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEI... 124 2e-27
sp|P30750|ABC_ECOLI ATP-BINDING PROTEIN ABC >gi|7445928|pir||G64... 124 2e-27
dbj|BAA77876.1| (D83536) ATP-binding protein ABC. [Escherichia c... 124 2e-27
sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BIN... 123 2e-27
pir||T34822 ABC-transporter ATP binding protein - Streptomyces c... 123 2e-27
pir||E82210 amino acid ABC transporter, ATP-binding protein VC13... 123 2e-27
pir||C48518 ABC-type transport protein (PEB1 5' region) - Campyl... 123 3e-27
pir||C69049 ABC transporter (ATP-binding protein) - Methanobacte... 123 4e-27
pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AA... 123 4e-27
pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumon... 123 4e-27
pir||E83478 probable ATP-binding component of ABC transporter PA... 123 4e-27
gb|AAG24255.1| (AY009114) YckI [Bacillus subtilis] 123 4e-27
pir||C82360 cell division ATP-binding protein FtsE VC0148 [impor... 122 5e-27
dbj|BAB03992.1| (AP001507) ABC transporter (ATP-binding protein)... 122 5e-27
dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein)... 122 5e-27
emb|CAA71848.1| (Y10908) sulfate transport ATP-binding protein [... 122 8e-27
emb|CAA67644.1| (X99258) ATP-binding subunit of ABC-transport sy... 117 2e-25
pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum per... 114 2e-24
emb|CAC11370.1| (AL445063) gliding motility protein related [The... 98 1e-19
gb|AAC45344.1| (AF100324) putative ATPase [Mycoplasma fermentans] 90 3e-17
gb|AAD05459.1| (AF064070) putative ABC-2 transporter hydrophilic... 81 2e-14
sp|P44884|MGLA_HAEIN GALACTOSIDE TRANSPORT ATP-BINDING PROTEIN M... 75 2e-12
>pir||G75203 abc transporter, ATP-binding protein PAB0103 - Pyrococcus abyssi
(strain Orsay) >gi|5457587|emb|CAB49078.1| (AJ248283)
ABC transporter, ATP-binding protein [Pyrococcus abyssi]
Length = 344
Score = 670 bits (1711), Expect = 0.0
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MLRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
MLRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN
Sbjct: 1 MLRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI
Sbjct: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL
Sbjct: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV
Sbjct: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
Query: 241 AKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
AKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL
Sbjct: 241 AKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
Query: 301 VRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
VRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF
Sbjct: 301 VRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
>pir||C71237 probable transport-ATP binding protein - Pyrococcus horikoshii
>gi|3256543|dbj|BAA29226.1| (AP000001) 345aa long
hypothetical transport-ATP binding protein [Pyrococcus
horikoshii]
Length = 345
Score = 522 bits (1329), Expect = e-147
Identities = 256/344 (74%), Positives = 300/344 (86%)
Query: 1 MLRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
ML+VES+SKDY+EFKLR+ISFDV++ EHFIILGPSG+GKTVLLEIIAGII PD GRI+L
Sbjct: 1 MLKVESISKDYREFKLREISFDVREGEHFIILGPSGSGKTVLLEIIAGIISPDRGRILLR 60
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D+T PPEKRN +YIPQ+YALFPHMTV+DNIAFGLKLR+I R+E+ RKV+E+++ LGI
Sbjct: 61 GEDITGLPPEKRNFSYIPQNYALFPHMTVFDNIAFGLKLRKIPRKEVARKVREVAESLGI 120
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+HLLHRKPRTLSGGE+QRVAIARALV++PELLL+DEPFANLDVQTKS+ + EMK WRKE
Sbjct: 121 DHLLHRKPRTLSGGEQQRVAIARALVVKPELLLMDEPFANLDVQTKSKLIREMKRWRKEF 180
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
GFT++HVTHSFEEA+SLGDRVG+MLRGRLVQVGDV++VFS P E VARFLGFENIIEGV
Sbjct: 181 GFTAIHVTHSFEEALSLGDRVGIMLRGRLVQVGDVRDVFSKPKSEEVARFLGFENIIEGV 240
Query: 241 AKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
A G IL+ ++I LP V GKVR+G+RPEDI + E VKTSARN F+A V GIE+LG L
Sbjct: 241 ANGRILKVGDLRIELPREVWGKVRVGIRPEDITIFMEGVKTSARNVFKARVEGIEDLGAL 300
Query: 301 VRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
V++ L +GGI L+AFITRSSLIELGI EG EVY SFK SAI VF
Sbjct: 301 VKLTLNLGGIILRAFITRSSLIELGIREGEEVYASFKASAIHVF 344
>sp|Q58762|YD67_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ1367
>gi|2129296|pir||F64470 sulfate permease (cysA) -
Methanococcus jannaschii >gi|1592011|gb|AAB99375.1|
(U67576) sulfate transport ATP-binding protein (cysA)
[Methanococcus jannaschii]
Length = 297
Score = 263 bits (666), Expect = 2e-69
Identities = 144/331 (43%), Positives = 215/331 (64%), Gaps = 42/331 (12%)
Query: 1 MLRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
ML+V ++SK +K+FKL+++SF++ +E + +ILGPSGAGK+VL++ IAGI++PD GRIILN
Sbjct: 1 MLKVNNLSKIWKDFKLKNVSFEIDRE-YCVILGPSGAGKSVLIKCIAGILKPDSGRIILN 59
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D+T+ PPEKRN+ Y+PQ+YALFP+ VY NIA+GL ++++++ EIDRKVKEI++ L I
Sbjct: 60 GEDITNLPPEKRNVGYVPQNYALFPNKNVYKNIAYGLIIKKVNKLEIDRKVKEIAEFLNI 119
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
HLL+R +TLSGGE+QRVA+ARAL++ P +LLLDEP + +D++ K ++E+K K
Sbjct: 120 SHLLNRDVKTLSGGEQQRVALARALILNPSILLLDEPTSAVDIKIKESIISELK---KIK 176
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
LH+TH EA +LG++VG+ + G L+ GD K + P ++ VA FLGF NII+
Sbjct: 177 HIPVLHITHDLAEARTLGEKVGIFMNGELIAFGD-KSILKKPKNKKVAEFLGF-NIIDDK 234
Query: 241 AKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
A + PED+I+ ++ EV+ I + G
Sbjct: 235 A-------------------------IAPEDVII---------KDGNGGEVVNIIDYGKY 260
Query: 301 VRVNLKIGGITLKAFITRSSLIELGISEGRE 331
+V +K G +KAF R + +G + G E
Sbjct: 261 KKVFVKYNGYIIKAFTERD--LNIGDNVGLE 289
>pir||C69223 anion permease - Methanobacterium thermoautotrophicum (strain
Delta H) >gi|2622017|gb|AAB85418.1| (AE000867) anion
permease [Methanobacterium thermoautotrophicum]
Length = 357
Score = 260 bits (657), Expect = 2e-68
Identities = 137/347 (39%), Positives = 215/347 (61%), Gaps = 6/347 (1%)
Query: 2 LRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNG 61
L ++++ D EF +R + + ++ +I+GP+G+GK++ LE I G EP G I L+G
Sbjct: 4 LDIDNLEIDLGEFVVRVDELHLSRGDYLVIIGPTGSGKSIFLETIMGFFEPISGTISLDG 63
Query: 62 VDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIE 121
D+T+ PPE+R+++ + QD+ LFPHMTV +NIA+GL+ + ++ I R+V EI+ ++GI+
Sbjct: 64 ADLTTLPPEERDVSIVYQDHCLFPHMTVEENIAYGLRKQTEMKENIHRQVHEIAAMMGID 123
Query: 122 HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELG 181
H+L+R P TLSGGE QR +IARA+++ P LLL+DEPF+ LD +TK + R
Sbjct: 124 HVLNRYPGTLSGGELQRASIARAIIVNPRLLLMDEPFSALDQRTKISLRKLIADIRDNFE 183
Query: 182 FTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVA 241
T +HVTH ++ L ++V VM G+++Q+G +EV + P VA FLG NI+EG
Sbjct: 184 TTVIHVTHDLDDIWWLSNKVAVMNHGKIIQMGKKEEVINKPSPYFVADFLG-ANILEGTV 242
Query: 242 KGNILEANGVKITLPI-----SVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEE 296
KG + V + I EG V + +RPE+I+++ +P SA+N F+ V I E
Sbjct: 243 KGQVNGLTSVNVNSNIFRTVDCGEGSVILSIRPENIMIAADPFMASAQNIFKGTVEDIIE 302
Query: 297 LGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKV 343
+V VNL+IG I L + +T ++ ELGI G E V K + +++
Sbjct: 303 TSRIVYVNLRIGDIVLTSAVTPGAVTELGIRTGEEFQVLIKATNVRI 349
>pir||G75124 abc-transporter ATP-binding protein PAB0545 - Pyrococcus abyssi
(strain Orsay) >gi|5458223|emb|CAB49712.1| (AJ248285)
ABC-TRANSPORTER ATP-BINDING PROTEIN [Pyrococcus abyssi]
Length = 329
Score = 259 bits (655), Expect = 3e-68
Identities = 145/327 (44%), Positives = 209/327 (63%), Gaps = 24/327 (7%)
Query: 1 MLRVE--SVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
M+RVE V K + FKLR + +VK E ILGPSG GKT L IIAG+ PD+G ++
Sbjct: 1 MVRVELRGVEKKFPGFKLR-VDLEVKDGELISILGPSGCGKTTTLRIIAGLERPDKGNVL 59
Query: 59 LNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
+G DVT PP RN+ ++ QDYALFPHM V+ N+AFGL++R++ R+EI+RKV+E+ +++
Sbjct: 60 FDGRDVTFLPPYSRNIGFVFQDYALFPHMNVFKNVAFGLEVRKLPRKEIERKVREVLELV 119
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G++ +R P LSGG++QRVA+ARALVIEPE+LLLDEP +NLD + + E+K +K
Sbjct: 120 GLKGFENRMPEQLSGGQQQRVALARALVIEPEVLLLDEPLSNLDAKVRESLRMEIKRIQK 179
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
ELG T+++VTH EEA+++ DR+ VM GR+ QVG E++ NP E VA+FLG N+++
Sbjct: 180 ELGITTMYVTHDQEEAMAISDRIAVMNFGRIEQVGRPLELYYNPKTEFVAKFLGTGNLLK 239
Query: 239 GVAKGNILEANGV----KITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGI 294
+ NGV ++ + V+G V++ RPE + + E V+ AEV+
Sbjct: 240 ------LRSTNGVACLGELCFNVGVDGPVKVFFRPESVEIGKEGVE--------AEVMDY 285
Query: 295 EELGPLVRVNLKIGGITLKAFITRSSL 321
E L +R L + G K I SL
Sbjct: 286 EILPGRIRFRLSVQG---KEIIAEDSL 309
>pir||H71006 probable ATP-binding transport protein - Pyrococcus horikoshii
>gi|3257773|dbj|BAA30456.1| (AP000006) 330aa long
hypothetical ATP-binding transport protein [Pyrococcus
horikoshii]
Length = 330
Score = 257 bits (649), Expect = 2e-67
Identities = 139/308 (45%), Positives = 199/308 (64%), Gaps = 12/308 (3%)
Query: 2 LRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNG 61
+ + + K + EF+L+ +S VK E +LGPSG GKT L IIAG+ +PD+GR+ +G
Sbjct: 4 IELRDIIKRFGEFELK-VSLSVKDGELLTLLGPSGCGKTTTLRIIAGLEKPDKGRVYFDG 62
Query: 62 VDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIE 121
D+T PP +RN+ + QDYALFPHMTV+ N+AFGL++RR+ R EI+++V+E+ ++G+
Sbjct: 63 RDITDLPPYERNIGLVFQDYALFPHMTVFKNVAFGLEVRRVPRMEIEKRVREVLDLVGLR 122
Query: 122 HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELG 181
+R P LSGG++QRVA+ARALVIEP++LLLDEP +NLD + + + E+K KELG
Sbjct: 123 GFENRLPEELSGGQQQRVALARALVIEPDVLLLDEPLSNLDAKVREKLRGEIKRIVKELG 182
Query: 182 FTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVA 241
T+++VTH EEA+ L DR+ VM GR+ QVG+ +++ NP +E VA FLG NI+E A
Sbjct: 183 ITTIYVTHDQEEAMVLSDRIAVMNFGRIEQVGEPYDLYYNPKNEFVANFLGISNIVELEA 242
Query: 242 KGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLV 301
K A + + EGK +I RPE++ + AEVIG E L V
Sbjct: 243 KEG--RACLGDLCFEVGREGKGKIFFRPENVAVG---------EGIEAEVIGYELLPGRV 291
Query: 302 RVNLKIGG 309
R+ L I G
Sbjct: 292 RLRLSIEG 299
>gb|AAD23570.1|AF121946_1 (AF121946) maltose transport protein MalK [Thermococcus litoralis]
Length = 372
Score = 242 bits (612), Expect = 4e-63
Identities = 143/349 (40%), Positives = 211/349 (59%), Gaps = 24/349 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTS------YPP 69
+R++S +VK E I+LGPSG GKT L +IAG+ EP G+I + V PP
Sbjct: 19 VREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPP 78
Query: 70 EKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPR 129
+ R++A + Q YAL+PHMTVYDNIAF LKLR++ RQEID++V+E++++LG+ LL+RKPR
Sbjct: 79 KDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPR 138
Query: 130 TLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTH 189
LSGG++QRVA+ RA+V +P++ L+DEP +NLD + + R E+K +++LG T+++VTH
Sbjct: 139 ELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTH 198
Query: 190 SFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEG-VAKGNIL 246
EA+++GDR+ VM RG L QVG EV+ P + VA F+G N ++ V + +
Sbjct: 199 DQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIGSPPMNFLDAIVTEDGFV 258
Query: 247 EANGVKI-TLPISVE---------GKVRIGVRPEDII-LSTEPVKTSARNEFRAEVIGIE 295
+ ++ LP E +V G+RPED+ V+ N RA V +E
Sbjct: 259 DFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFAQVRVPGENLVRAVVEIVE 318
Query: 296 ELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
LG V+L++GG+T S E + EG EV V F I +F
Sbjct: 319 NLGSERIVHLRVGGVT----FVGSFRSESRVREGVEVDVVFDMKKIHIF 363
>gb|AAD24578.1|AF126010_1 (AF126010) trehalose/maltose transport ATP-hydrolyzing subunit MalK
[Thermococcus litoralis]
Length = 372
Score = 242 bits (611), Expect = 5e-63
Identities = 144/350 (41%), Positives = 214/350 (61%), Gaps = 26/350 (7%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTS------YPP 69
+R++S +VK E I+LGPSG GKT L +IAG+ EP G+I + V PP
Sbjct: 19 VRELSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDRLVADPEKGIFVPP 78
Query: 70 EKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPR 129
+ R++A + Q YAL+PHMTVYDNIAF LKLR++ RQEID++V+E++++LG+ LL+RKPR
Sbjct: 79 KDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPR 138
Query: 130 TLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTH 189
LSGG++QRVA+ RA+V +P++ L+DEP +NLD + + R E+K +++LG T+++VTH
Sbjct: 139 ELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTH 198
Query: 190 SFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEG-VAKGNIL 246
EA+++GDR+ VM RG L QVG EV+ P + VA F+G N ++ V + +
Sbjct: 199 DQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFIGSPPMNFLDAIVTEDGFV 258
Query: 247 EANGVKI-TLPISVE---------GKVRIGVRPEDII-LSTEPVKTSARNEFRAEVIGIE 295
+ ++ LP E +V G+RPED+ V+ N RA V +E
Sbjct: 259 DFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFARVRVPGENLVRAVVEIVE 318
Query: 296 ELGPLVRVNLKIGGIT-LKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
LG V+L++GG+T + AF + S + EG EV V F I +F
Sbjct: 319 NLGSERIVHLRVGGVTFVGAFRSESR-----VREGVEVDVVFDMKKIHIF 363
>pir||B75207 multiple sugar-binding transport ATP-binding protein msmk PAB0123 -
Pyrococcus abyssi (strain Orsay)
>gi|5457614|emb|CAB49105.1| (AJ248283) MULTIPLE
SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
[Pyrococcus abyssi]
Length = 371
Score = 241 bits (608), Expect = 1e-62
Identities = 140/363 (38%), Positives = 222/363 (60%), Gaps = 24/363 (6%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+++ +V K + +F ++++S ++K E ++LGPSG GKT L +IAG+ EP G+I ++
Sbjct: 4 VKLINVWKKFGDFTAVKELSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTIGQIYID 63
Query: 61 GVDVTS------YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEI 114
V PP++R++A + Q YAL+PHMTVYDNIAF LKLR++ +QEIDR+V+E+
Sbjct: 64 DKLVADPEKGIFVPPKERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDRRVREV 123
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+++LG+ LL RKPR LSGG++QRVA+ RA++ P++ L+DEP +NLD + + + E+K
Sbjct: 124 AEMLGLTELLKRKPRELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELK 183
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG-- 232
+++LG T+++VTH EA+++GDR+ VM RG L QVG EV++ P++ VA F+G
Sbjct: 184 KLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGELQQVGTPDEVYNKPLNTFVAGFIGSP 243
Query: 233 -FENIIEGVAKGNILEANGVKITL---------PISVEGK-VRIGVRPEDIILSTEPVKT 281
+ V+ L+ ++ L ++ GK V G+RPEDI ++
Sbjct: 244 PMNFLTATVSSDGFLDFGEFRLKLLKDQFEVLEENNLIGKEVIFGIRPEDIYDASFIRVE 303
Query: 282 SARNEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAI 341
N RA+V +E LG V+L++G I A + S++E EG+E V F
Sbjct: 304 EPENIVRAKVDIVENLGGEKIVHLRLGDIIFTAKFPQESVVE----EGQEAEVFFDMKKA 359
Query: 342 KVF 344
VF
Sbjct: 360 HVF 362
>pir||G72543 probable ABC transporter ATP-binding protein APE1635 - Aeropyrum
pernix (strain K1) >gi|5105323|dbj|BAA80636.1|
(AP000062) 354aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 354
Score = 241 bits (608), Expect = 1e-62
Identities = 133/308 (43%), Positives = 194/308 (62%), Gaps = 9/308 (2%)
Query: 2 LRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R+E + K + K L+ I ++K E ++LGPSG GKT L I+AG+ PD GR+ +
Sbjct: 6 VRLEGIVKRFGKTVALKGIDLEIKDGEAVVLLGPSGCGKTTTLRIVAGLERPDAGRVYFD 65
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G DVT PP+ RN+A + Q YAL+PHM V+DNIAF LK++++ R EI R+V+ +++L I
Sbjct: 66 GRDVTGLPPKDRNVAMVFQSYALWPHMRVFDNIAFPLKIKKLPRDEIVRRVRWAAELLEI 125
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+HLL R P LSGG++QRVA+ARA+V EPE+LL+DEP +NLD + + +E+K ++ L
Sbjct: 126 DHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAILRIKMRSEIKKLQRRL 185
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
G T ++VTH EA+ +GDR+ VM G + QVG +V+ P + VA F+G N+
Sbjct: 186 GVTMIYVTHDQVEAMVIGDRIVVMNFGEIQQVGTPSDVYHRPANTFVATFIGSPQMNLFS 245
Query: 239 GVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELG 298
G G LEA G + +G+V +GVRPED+ L + F A V +E+LG
Sbjct: 246 GKVAGGRLEALGGIVEGVGLPDGEVLVGVRPEDVALGKGDL------TFEAYVDFVEDLG 299
Query: 299 PLVRVNLK 306
V+LK
Sbjct: 300 SDSVVHLK 307
>pir||C71220 probable sugar-binding transport ATP-binding protein - Pyrococcus
horikoshii >gi|3256407|dbj|BAA29090.1| (AP000001) 373aa
long hypothetical sugar-binding transport ATP-binding
protein [Pyrococcus horikoshii]
Length = 373
Score = 239 bits (603), Expect = 4e-62
Identities = 140/358 (39%), Positives = 214/358 (59%), Gaps = 21/358 (5%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+++E+++K + F + ++ +K E ++LGPSG GKT L +IAG+ EP EGRI
Sbjct: 13 VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFG 72
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
DVT PP+ RN++ + Q YA++PHMTVY+NIAF LK+++ + EID++V+ +++L I
Sbjct: 73 DRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEIDKRVRWAAELLQI 132
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E LL+R P LSGG++QRVA+ARA+V+EP++LL+DEP +NLD + + E+K +++L
Sbjct: 133 EELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKL 192
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
T+++VTH EA+++GDR+ VM RG+L+Q+G EV+ P VA F+G NI+E
Sbjct: 193 KVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPEMNILE 252
Query: 239 GVAKGNILEANGVKITLPIS--------VEGKVRIGVRPEDIILSTEPVKTSARNEFRAE 290
LE G +I LP V V G+RPE ++ E V A + A
Sbjct: 253 VSVGDGYLEGRGFRIELPQDLMDLLKDYVGKTVLFGIRPEH--MTVEGVSELAHMKRTAR 310
Query: 291 VIG----IEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
+IG +E LG +++K G +K + + I GREV V I VF
Sbjct: 311 LIGKVDFVEALGTDTILHVKFGDELVKVKLPG----HIPIEPGREVKVIMDLDMIHVF 364
>pir||D75187 probable maltose/maltodextrin transport ATP-binding PAB2336 -
Pyrococcus abyssi (strain Orsay)
>gi|5457456|emb|CAB48947.1| (AJ248283) hypothetical
MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING [Pyrococcus
abyssi]
Length = 364
Score = 238 bits (602), Expect = 5e-62
Identities = 139/356 (39%), Positives = 214/356 (60%), Gaps = 17/356 (4%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R+E+++K + F + ++ +K E ++LGPSG GKT L +IAG+ EP EG+I
Sbjct: 4 VRLENLTKKFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGKIYFG 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
+VT PP +RN++ + Q YA++PHMTVYDNIAF LK+++ R EID++V+ +++L I
Sbjct: 64 DREVTYLPPRERNISMVFQSYAVWPHMTVYDNIAFPLKIKKFPRDEIDKRVRWAAELLQI 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E LL R P LSGG++QRVA+ARA+V+EP++LL+DEP +NLD + + E+K +++L
Sbjct: 124 EELLDRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
T+++VTH EA+++GDR+ VM RG+L+QVG EV+ P VA F+G NI+E
Sbjct: 184 KVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQVGPPTEVYLKPNSVFVATFIGAPEMNIVE 243
Query: 239 GVAKGNILEANGVKITLPISVE-------GK-VRIGVRPEDIILS--TEPVKTSARNEFR 288
LE G KI LP + GK V G+RPE + + +E +
Sbjct: 244 VSVGDGYLEGKGFKIELPQDIMELLRDYIGKTVLFGIRPEHMTVEGVSELAHMKKTAKLN 303
Query: 289 AEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
A+V +E LG +++K G +K + IE+ G+EV + + VF
Sbjct: 304 AKVDFVEALGTDTILHVKFGDELVKVKLPGHIPIEV----GKEVTIVIDLDMMHVF 355
>pir||H71241 probable multiple sugar-binding transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256580|dbj|BAA29263.1|
(AP000001) 375aa long hypothetical multiple
sugar-binding transport ATP-binding protein [Pyrococcus
horikoshii]
Length = 375
Score = 238 bits (600), Expect = 9e-62
Identities = 137/349 (39%), Positives = 209/349 (59%), Gaps = 24/349 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTS------YPP 69
++D+S ++K E ++LGPSG GKT L +IAG+ EP G+I + V PP
Sbjct: 22 VKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQIYIEDNLVADPEKGVFVPP 81
Query: 70 EKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPR 129
++R++A + Q YAL+PHMTVYDNIAF LKLR++ +QEID++V+E++++LG+ LL+RKPR
Sbjct: 82 KERDVAMVFQSYALYPHMTVYDNIAFPLKLRKVPKQEIDKRVREVAEMLGLTELLNRKPR 141
Query: 130 TLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTH 189
LSGG++QRVA+ RA++ P++ L+DEP +NLD + + + E+K +++LG T+++VTH
Sbjct: 142 ELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKLQRQLGVTTIYVTH 201
Query: 190 SFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEG-VAKGNIL 246
EA+++GDR+ VM +G L QVG EV+ PV+ VA F+G N ++ + L
Sbjct: 202 DQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNTFVAGFIGSPPMNFLDATITDDGFL 261
Query: 247 EANGVKITL----------PISVEGKVRIGVRPEDI-ILSTEPVKTSARNEFRAEVIGIE 295
+ K+ L V +V G+RPED+ S + N +A V IE
Sbjct: 262 DFGEFKLKLLQDQFEVLEEENMVGKEVIFGIRPEDVHDASFTHIDVPEENTVKATVDIIE 321
Query: 296 ELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
LG V+L+ G I+ A + S + EG EV V F I +F
Sbjct: 322 NLGGEKIVHLRRGNISFTAKFPKESKVR----EGDEVSVVFDMKKIHIF 366
>pir||F72756 probable multiple sugar-binding transport ATP-binding protein
APE0043 - Aeropyrum pernix (strain K1)
>gi|5103431|dbj|BAA78952.1| (AP000058) 381aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 381
Score = 238 bits (600), Expect = 9e-62
Identities = 148/367 (40%), Positives = 218/367 (59%), Gaps = 35/367 (9%)
Query: 2 LRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R+E V K + K + + +K E F++LGPSG GKT L +IAG+ PDEGRI+++
Sbjct: 17 IRLEGVVKRFGKVVAVDHVDLSIKDGEFFVLLGPSGCGKTTTLRLIAGLEYPDEGRILID 76
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRR----ISRQEIDRKVKEISK 116
G DVT P+ RN+A + Q+YAL+PHM+V+DNIAF L LRR +++ +I R+V E++K
Sbjct: 77 GEDVTFKDPKDRNVAMVFQNYALYPHMSVFDNIAFTLHLRRKEMGLTKDDIRRRVIEVAK 136
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
+L IE LL RKP LSGG++QRVA+ARALV P++ L+DEP +NLD + E+K
Sbjct: 137 LLRIEDLLDRKPGQLSGGQQQRVALARALVRRPKVWLMDEPLSNLDALLRLAMRAELKKL 196
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG---- 232
+K+L T+++VTH EA+S+ DR+ VM +GR+VQVG +EV+ P VA F+G
Sbjct: 197 QKDLKITTVYVTHDQAEAMSMADRIAVMNKGRVVQVGTPEEVYMRPKHTFVATFIGAPPM 256
Query: 233 --FENIIEGVAKGNILEANGVKITLP------ISVEG--KVRIGVRPEDIILSTEPVKTS 282
E +E V + + G +P I +G K+ +G+RPE I +S +
Sbjct: 257 NLVECDVESVGEDLWISCPGFSRRVPEEARSVIESKGVRKIYLGIRPEFISVS----RRE 312
Query: 283 ARNEFRAEVIGIEELGPLVRVNLKIG-GITLKAFITRSSLIELGISE----GREVYVSFK 337
+V +E LG VN+ IG GI +KA + LG+ E G +VY+
Sbjct: 313 TEGSIAGKVYVVEPLGSEYVVNVDIGDGIIIKAKV-------LGLREKMTPGDKVYLKLD 365
Query: 338 TSAIKVF 344
S +K+F
Sbjct: 366 WSKVKIF 372
>gb|AAK41416.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 368
Score = 235 bits (592), Expect = 8e-61
Identities = 137/356 (38%), Positives = 215/356 (59%), Gaps = 23/356 (6%)
Query: 2 LRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGR 56
+++E++ K+Y+E K LR ++ +++K E +ILGPSG GKT +L+IIAG++ D+G
Sbjct: 5 VKLENIWKEYEEKKRKVQVLRGLNLEIEKGEFVVILGPSGEGKTTILKIIAGLLRQDKGH 64
Query: 57 IILNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
+ L G V PP+ R +A +PQ+YA++P M+VYDNIAF LK+ +S+ EI ++V E+++
Sbjct: 65 VYLRGEVVDDLPPKDRRVAMVPQNYAIYPFMSVYDNIAFPLKVMHLSKDEIKKRVLEVAR 124
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
+L I++LL RKP LSGG+ QRVAIARALV +++L+DEP +NLD Q + E+K
Sbjct: 125 MLRIDNLLERKPSQLSGGQMQRVAIARALVKGADIILMDEPLSNLDAQVRVVAREELKQL 184
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE-- 234
+++L T ++VTH EA+SL +V ++ G + GD E++ P V FLG
Sbjct: 185 QRDLKPTIIYVTHDQVEALSLATKVAILHDGVVQAYGDPMEIYKRPNSAWVGSFLGNPPM 244
Query: 235 NIIEGVAKGNILEANGVKITLPISVEG------KVRIGVRPEDIILSTEPVKTSARNEFR 288
NII G +G+ + + +I LP + KV +GVRPED+ ++ S E +
Sbjct: 245 NIIRGEIEGDSIIIDSYRIGLPEEYKNLVKNGQKVLVGVRPEDM-----EIRNSGEIEGK 299
Query: 289 AEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
E+ +E+LGP ++LKI T I +S G +V +S TS + +F
Sbjct: 300 VEM--VEDLGPYSIIHLKINEETTIRVIEKSLSRR---ERGEKVRISIDTSKVVLF 350
>gi|11497712 sulfate ABC transporter, ATP-binding protein (cysA) [Archaeoglobus
fulgidus] >gi|7445689|pir||D69261 sulfate ABC
transporter, ATP-binding protein (cysA) homolog -
Archaeoglobus fulgidus >gi|2650556|gb|AAB91137.1|
(AE001100) sulfate ABC transporter, ATP-binding protein
(cysA) [Archaeoglobus fulgidus]
Length = 240
Score = 234 bits (590), Expect = 1e-60
Identities = 117/225 (52%), Positives = 164/225 (72%), Gaps = 4/225 (1%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
++ F++ ++ + ++LGP+GAGK+V LE+IAGI++PD G + LNG D+T PPE+R + ++
Sbjct: 17 NVDFEMGRD-YCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFV 75
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
PQDYALFPH++VY NIA+GL R + R E DR+V+E+++ LGI HLL RKP LSGGE+Q
Sbjct: 76 PQDYALFPHLSVYRNIAYGL--RNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQ 133
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ARALVI+P LLLLDEP + +D++TK M E++ ++E LHVTH EA L
Sbjct: 134 RVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAML 193
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAK 242
D V VML GR+V+ G +KE+FS E VA FL N++ V+K
Sbjct: 194 ADEVAVMLNGRIVEKGKLKELFSAKNGE-VAEFLSARNLLLKVSK 237
>emb|CAC11277.1| (AL445063) probable trehalose/maltose transport ATP-hydrolyzing
subunit MalK [Thermoplasma acidophilum]
Length = 371
Score = 233 bits (589), Expect = 2e-60
Identities = 128/315 (40%), Positives = 202/315 (63%), Gaps = 26/315 (8%)
Query: 1 MLRVESVSKDYKEFK-------LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPD 53
++R+E V++D+ + + DI+ + E F+ILGPSG+GK+ +L IIAG+ + D
Sbjct: 3 VVRLEHVTRDFGKNSPNGPHTGVFDINLTINNGEFFVILGPSGSGKSTMLRIIAGLEKVD 62
Query: 54 EGRIILNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKE 113
G I L+ ++T +PP+ R++A + Q+YAL+P MTVYDNIAF LK+++IS+QEID +V+E
Sbjct: 63 SGHIFLDEYEITDFPPKDRDMAMVFQNYALYPFMTVYDNIAFPLKIQKISKQEIDERVRE 122
Query: 114 ISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEM 173
++K+L IE +L+ KP +SGG++QRVA+ RA++ P + L+DEP +NLD + + E+
Sbjct: 123 VAKLLDIEGILNMKPGQISGGQRQRVALGRAIIRRPAVFLMDEPLSNLDAKLRGTMRVEL 182
Query: 174 KVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGF 233
K ++LG T+++VTH EA++L DRVGV+ RG L+QVG +V+ +P + +A F+G
Sbjct: 183 KKLHEQLGITTIYVTHDQIEAMTLADRVGVINRGNLIQVGGPMDVYDSPANTFIAGFVGD 242
Query: 234 E--NIIEGV----AKGNILEANGVKITL----PISVEGKVRIGVRPEDIILSTEPVKTSA 283
N I+G + IL N K+ + P +V +V +G+RPEDI E
Sbjct: 243 PPINFIDGTIVTEGRDKILRINEFKLDIGQEFPDNV-AEVTVGIRPEDIGEGDE------ 295
Query: 284 RNEFRAEVIGIEELG 298
F AE+ I+ LG
Sbjct: 296 --GFVAELEAIQPLG 308
>pir||F72510 probable multiple sugar-binding transport ATP-binding protein
APE2060 - Aeropyrum pernix (strain K1)
>gi|5105758|dbj|BAA81070.1| (AP000063) 388aa long
hypothetical multiple sugar-binding transport
ATP-binding protein [Aeropyrum pernix]
Length = 388
Score = 233 bits (588), Expect = 2e-60
Identities = 140/342 (40%), Positives = 200/342 (57%), Gaps = 21/342 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
+RD++ ++ +E ILGPSG+GKT LL +IAGI +P GRI N VDVT PP KRN+
Sbjct: 16 VRDVNLYIEDKEFVSILGPSGSGKTTLLYLIAGIYKPSRGRIYFNDVDVTDLPPNKRNIG 75
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q+YAL+PHMTVY+NIAF L+LR I KV ++K+LGIE LL R P LSGG+
Sbjct: 76 LVFQNYALYPHMTVYENIAFPLRLRNFGEPAIKEKVLSVAKLLGIEGLLDRYPAQLSGGQ 135
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ARALV EPE+LLLDEP +NLD + + +E+K +KELG T+++VTH EA+
Sbjct: 136 QQRVALARALVKEPEVLLLDEPLSNLDALLRIKIRSELKKLQKELGITAIYVTHDQSEAL 195
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGF--ENIIE---GVAKGNILEANG 250
++ DR+ ++ G + QVG +V+ P + VA F+G N++ ++ +L G
Sbjct: 196 AMADRIAIIASGVIQQVGKPWDVYYKPRNVFVASFIGTPPANLVSVPLDSSRRCLLLPGG 255
Query: 251 VKITLPISVEGK--------VRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVR 302
+ P + K V +G RPE +LS P+ E AEV +E LG
Sbjct: 256 GRYCPPRRIAEKLAAVKTNSVILGFRPEVAVLSESPLGDYVSME--AEVYTVETLGRENI 313
Query: 303 VNLKIGGITLKAFI------TRSSLIELGISEGREVYVSFKT 338
V L + G +K + S I + I E + +Y +T
Sbjct: 314 VTLLVNGSQVKVIVPPVVEPRPGSRIFINIEEDKVMYFDPET 355
>pir||H72555 probable transporter ATP-binding protein APE1732 - Aeropyrum pernix
(strain K1) >gi|5105420|dbj|BAA80733.1| (AP000062) 358aa
long hypothetical transporter ATP-binding protein
[Aeropyrum pernix]
Length = 358
Score = 232 bits (586), Expect = 4e-60
Identities = 133/320 (41%), Positives = 196/320 (60%), Gaps = 14/320 (4%)
Query: 2 LRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R+ESV+K + D +S ++ E F +LGPSG GKT L +IAG PDEGR+ +
Sbjct: 4 IRLESVTKRFGNTVALDRVSLNISDGEIFTLLGPSGCGKTTTLRVIAGFETPDEGRVYIG 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
DVT P +RN A + Q+YAL+PHM V+DNIA+GLKLR++ R EI R+V+ +++L I
Sbjct: 64 SRDVTMLKPYERNTAMVFQNYALWPHMRVFDNIAYGLKLRKLPRSEIVRRVRWAAELLEI 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+HLL R P LSGG++QRVA+ARA+V EPE+LL+DEP +NLD + + E+ +K L
Sbjct: 124 DHLLDRYPHQLSGGQQQRVAVARAIVTEPEVLLMDEPLSNLDAHLRLKMREEIVRLQKRL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G T ++VTH EEA+S+ RV VM RGR+ QVG EV+ P VA F+G +++G
Sbjct: 184 GVTIVYVTHDQEEALSISHRVAVMNRGRVEQVGTPMEVYEKPATYFVATFIGRSTVLDG- 242
Query: 241 AKGNILEANGVKITLP-------ISVEGKVRIGVRPEDIILSTEPVKT----SARNEFRA 289
+L + V++ L +EG +R G R + +++ E VK + N F
Sbjct: 243 RVSEVLGSGMVRVALEGGLSIVGTDMEGGLRQGERVK-VVIRPERVKVGHEYNGENVFEG 301
Query: 290 EVIGIEELGPLVRVNLKIGG 309
+V LG ++ +++GG
Sbjct: 302 KVSLAMFLGWRTQLKVEVGG 321
>pir||H72272 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981834|gb|AAD36351.1|AE001783_2
(AE001783) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 369
Score = 227 bits (573), Expect = 1e-58
Identities = 126/322 (39%), Positives = 200/322 (61%), Gaps = 18/322 (5%)
Query: 4 VESVSKDY--KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNG 61
+E+V+K Y K +++ + V+ +E ++LGPSG GKT L +IAG+ E +G+I ++G
Sbjct: 8 LENVTKVYENKVVAVKNANLVVEDKEFVVLLGPSGCGKTTTLRMIAGLEEITDGKIYIDG 67
Query: 62 VDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIE 121
V P+ R++A + Q+YAL+PHMTVY+N+AFGLKLR+ + EIDR+V+E +K+LGIE
Sbjct: 68 KVVNDVEPKDRDIAMVFQNYALYPHMTVYENMAFGLKLRKYPKDEIDRRVREAAKILGIE 127
Query: 122 HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELG 181
+LL RKPR LSGG++QRVA+ RA+V P++ L DEP +NLD + + + +E+K L
Sbjct: 128 NLLDRKPRQLSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRSELKKLHHRLQ 187
Query: 182 FTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG-----FEN- 235
T ++VTH EA+++ D++ VM G + Q+G E++++P + VA F+G F N
Sbjct: 188 ATIIYVTHDQVEAMTMADKIVVMKDGEIQQIGTPHEIYNSPANVFVAGFIGSPPMNFVNA 247
Query: 236 -IIEGVAKGNILEANGVKITLPISVEGK--------VRIGVRPEDIILSTEPVKTSARNE 286
++ G G ++A+G K+ +P E K + G+RPEDI + S N
Sbjct: 248 RVVRGEG-GLWIQASGFKVKVPKEFEDKLANYIDKEIIFGIRPEDIYDKLFALAPSPENT 306
Query: 287 FRAEVIGIEELGPLVRVNLKIG 308
V +E LG +++K+G
Sbjct: 307 ITGVVDVVEPLGSETILHVKVG 328
>pir||A71243 probable maltose/maltodextrin transport ATP-binding protein -
Pyrococcus horikoshii >gi|3256589|dbj|BAA29272.1|
(AP000001) 362aa long hypothetical maltose/maltodextrin
transport ATP-binding protein [Pyrococcus horikoshii]
Length = 362
Score = 227 bits (573), Expect = 1e-58
Identities = 141/355 (39%), Positives = 205/355 (57%), Gaps = 21/355 (5%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+++E++ K + F L +I+ +K E +LGPSG+GK+ LL IAGI +P G+I +
Sbjct: 4 IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFD 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
DVT PP+ RN+ + Q++AL+PHMTVY NIAF L+LR+ R+EID+KV+E++K+L I
Sbjct: 64 EKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHI 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+ LL+R P LSGG++QRVAIARALV EPE+LLLDEP +NLD + E+K +KEL
Sbjct: 124 DKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
G T+++VTH EA+++ DR+ V+ G ++QVG EV+ P + V FLG N +E
Sbjct: 184 GITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGNPPMNFVE 243
Query: 239 G-VAKGNILEANGVKITLP------ISVEG--KVRIGVRPEDIILSTEPVKTSARNEFRA 289
V G ++ K+ +P + G +V IG RP D E VK
Sbjct: 244 AKVEDGKLVITEKSKLPIPKQYVEIVKETGITEVIIGFRPHD----AEIVKGEGEG-IVG 298
Query: 290 EVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
EV E LG V + + +K F S G +V + K + +F
Sbjct: 299 EVYSFEPLGREQIVTVSVNDSIVKVFAPEGE----HFSFGEKVTIKVKEELLVLF 349
>pir||A75208 sugar transport ATP-binding protein. PAB2232 - Pyrococcus abyssi
(strain Orsay) >gi|5457621|emb|CAB49112.1| (AJ248283)
SUGAR TRANSPORT ATP-BINDING PROTEIN. [Pyrococcus abyssi]
Length = 362
Score = 227 bits (573), Expect = 1e-58
Identities = 140/356 (39%), Positives = 207/356 (57%), Gaps = 23/356 (6%)
Query: 2 LRVESVSKDYKEF-KLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R+E++ K + F L +I+ ++K E +LGPSG+GK+ LL +AGI +P GRI +
Sbjct: 4 IRLENIVKKFGNFIALDNINLEIKDGEFMALLGPSGSGKSTLLYTVAGIYKPTSGRIYFD 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
DVT PP+ RN+ + Q++AL+PHMTVY NIAF L+LR+ + EID KV++++K+L I
Sbjct: 64 ERDVTELPPKDRNIGLVFQNWALYPHMTVYKNIAFPLELRKAPKDEIDEKVRKVAKMLHI 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E LL R P LSGG++QRVAIARALV EPE+LLLDEP +NLD + E+K +KEL
Sbjct: 124 EKLLDRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKEL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
G T+++VTH EA+++ DR+ V+ G+++QVG EV+ P+ + V FLG N +E
Sbjct: 184 GITTIYVTHDQAEALAMADRIAVIREGKILQVGTPDEVYYKPMYKFVGGFLGNPPMNFVE 243
Query: 239 G-VAKGNILEANGVKITLP---------ISVEGKVRIGVRPEDIILSTEPVKTSARNEFR 288
V G +L + I +P ++V+ V IG RP D E +K +
Sbjct: 244 ARVEDGKLLISENNYIPVPKQYRQIIERLNVK-DVIIGFRPHD----AEVIKGISEG-IV 297
Query: 289 AEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
EV E LG V + + +K F G +V + K ++ +F
Sbjct: 298 GEVYSFEPLGREQIVTVSVNDSIVKVFAPEGEHFNF----GEKVTIKLKEGSVVLF 349
>pir||E72378 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4980927|gb|AAD35506.1|AE001721_5
(AE001721) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 359
Score = 226 bits (570), Expect = 3e-58
Identities = 133/318 (41%), Positives = 198/318 (61%), Gaps = 19/318 (5%)
Query: 2 LRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+RV ++ K + + K D +SF+VK E +LGPSG GKT L ++AGI +P G I +
Sbjct: 4 IRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFD 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
V V PP+ R + + Q+YAL+PHMTV++NIAF L+ RRIS+ E++++V EI++ L I
Sbjct: 64 DVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLI 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
++LL RKP LSGG++QRVA+ARALV +P++LL DEP +NLD + E+K ++EL
Sbjct: 124 DNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQEL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG-------- 232
G TS++VTH EA+++ R+ V +G+LVQ G EV+ +P + VA F+G
Sbjct: 184 GITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPPTNFLR 243
Query: 233 -FENIIEGVAKGNILEANGVKITLPISVEGKVR---IGVRPEDIILSTEPVKTSARNEFR 288
F +E K IL+ + V I LP V+ K++ +G+RPE +S E V+ N
Sbjct: 244 DFSVSVEN--KQTILKRDDVIIKLPEPVDVKLKEVVVGIRPEHCRISRERVE----NSIP 297
Query: 289 AEVIGIEELGPLVRVNLK 306
V +E LG + VN+K
Sbjct: 298 GVVYVVEPLGRDIIVNVK 315
>gi|11499200 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
[Archaeoglobus fulgidus] >gi|7445763|pir||G69450
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) homolog - Archaeoglobus fulgidus
>gi|2648948|gb|AAB89638.1| (AE000991)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Archaeoglobus fulgidus]
Length = 345
Score = 226 bits (569), Expect = 4e-58
Identities = 127/339 (37%), Positives = 197/339 (57%), Gaps = 13/339 (3%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ +E +SK Y L DI+ +++ E F +LGPSG+GKT ++ IIAG+ PD+G + +N
Sbjct: 6 VELEGISKSYDSTTVLEDINLRIQQGEFFSLLGPSGSGKTTIIRIIAGLTFPDQGFVRIN 65
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D TS PP +RN+ + Q+ ALFPH+ V++N+A+GL+LR+I EI +V +++ +
Sbjct: 66 GEDCTSLPPYRRNVGMVFQNLALFPHLNVFENVAYGLRLRKIPEGEIKDRVYRYLELVNL 125
Query: 121 EHLLH--RKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
+ ++ RK LSGG++QRVAIARALV EP +LLLDEP LD++ + ++E+K +K
Sbjct: 126 DPEIYAKRKVEQLSGGQQQRVAIARALVTEPSILLLDEPLGALDLKIRQHMISELKRIQK 185
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
LG T ++VTH EA+ L DR+ V+ GR+ Q+G +E++ P VA F+G N +E
Sbjct: 186 TLGTTFIYVTHDQSEALLLSDRLAVLNEGRIHQIGTPREIYERPKTRFVASFIGETNFLE 245
Query: 239 G-VAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEEL 297
V G ++ G + + I +RPE + + A N F A V I L
Sbjct: 246 ARVVNGEVITEIGKVRVFGLDGAREFCISIRPEKL-----KINQQAENTFEAVVEEIGYL 300
Query: 298 GPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSF 336
G + + L+ G + +KAF + EG V V +
Sbjct: 301 GSFLMLKLRAGDVVVKAFAPPQE----NVREGERVIVGW 335
>pir||A72279 sugar ABC transporter, ATP-binding protein - Thermotoga maritima
(strain MSB8) >gi|4981786|gb|AAD36307.1|AE001779_9
(AE001779) sugar ABC transporter, ATP-binding protein
[Thermotoga maritima]
Length = 355
Score = 224 bits (566), Expect = 9e-58
Identities = 116/285 (40%), Positives = 187/285 (64%), Gaps = 8/285 (2%)
Query: 2 LRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
++++ V K + + D I V + E ++LGPSG GKT LL IAG+ + G+I N
Sbjct: 4 VKIDGVKKYFGNVRALDGIDLVVNEGEFLVLLGPSGCGKTTLLRCIAGLEQVTGGKIFFN 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
DVT+ PP+ RN++ + Q YA++PHM VYDNIA+ LKL+++ ++EI+++VK + +L I
Sbjct: 64 DRDVTNLPPKDRNISMVFQSYAVWPHMKVYDNIAYPLKLKKVPKEEIEKRVKWAADLLHI 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
LL R P LSGG++QRVA+ARA+V EPE+LL+DEP +NLD + + +E+K ++ +
Sbjct: 124 SELLDRYPAQLSGGQRQRVAVARAIVHEPEVLLMDEPLSNLDALLRVKMRSELKKLQERI 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI---- 236
G T+++VTH EA+++GDR+ VM +G+L QVG E++ +PV+ VA F+G +
Sbjct: 184 GVTTIYVTHDQTEAMTMGDRIAVMNQGKLQQVGTPSEIYHHPVNIFVAGFVGSPQMNFLE 243
Query: 237 IEGVAKGNILEANGVKITLPISVE---GKVRIGVRPEDIILSTEP 278
+E ++GN + +I +P + KV +G+RPE++ L +P
Sbjct: 244 MEVRSEGNSVVLQNGEIKIPAKTDPGAKKVILGIRPENVYLEEKP 288
>sp|P45171|POTA_HAEIN SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|1075318|pir||B64118 spermidine/putrescine transport
protein potA - Haemophilus influenzae (strain Rd KW20)
>gi|1574806|gb|AAC22991.1| (U32813)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Haemophilus influenzae Rd]
Length = 381
Score = 219 bits (552), Expect = 4e-56
Identities = 111/304 (36%), Positives = 190/304 (61%), Gaps = 16/304 (5%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++ + S+ K Y + D + + E ILGPSG GKT +L ++AG+ E D G IIL
Sbjct: 19 IIELRSIKKSYGSNTIINDFNLTINNGEFVTILGPSGCGKTTVLRLLAGLEELDSGSIIL 78
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+G D+T+ P EKR++ + Q YALFPHMT+++N+AFGL+++++ +EI +V E +++
Sbjct: 79 DGEDITNVPAEKRHINTVFQSYALFPHMTIFENVAFGLRMQKVPNEEIKPRVLEALRMVQ 138
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
+E + RKP LSGG++QR+AIARA+V +P++LLLDE + LD + + + E+K+ +++
Sbjct: 139 LEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQQELKMLQRQ 198
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG 239
LG T + VTH EEAI++ DR+ ++ +G++ Q G +E++ +P + VARF+G N+ E
Sbjct: 199 LGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEDPANLFVARFIGEINVFEA 258
Query: 240 VA----KGNILEAN------GVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRA 289
++ AN + +P+ + K+++ +RPEDI+ ++ NE
Sbjct: 259 TVIERKSEQVVLANVEGRICDIYTDMPVEKDQKLQVLLRPEDIV-----IEELDENEHSK 313
Query: 290 EVIG 293
+IG
Sbjct: 314 AIIG 317
>gb|AAC27495.1| (AF077856) PotA [Actinobacillus actinomycetemcomitans]
Length = 372
Score = 219 bits (552), Expect = 4e-56
Identities = 107/285 (37%), Positives = 185/285 (64%), Gaps = 11/285 (3%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++ + S++K Y ++D + + E ILGPSG GKT +L ++AG+ E D G IIL
Sbjct: 10 IIELRSITKSYGSNTIIKDFNLTINNGEFLTILGPSGCGKTTVLRLLAGLEELDSGNIIL 69
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+G D+T+ P EKR++ + Q YALFPHMT+++N+AFGL+++++ EI +V E +++
Sbjct: 70 DGEDITNVPAEKRHVNTVFQSYALFPHMTIFENVAFGLRMQKVPEAEIKPRVLEALRMVQ 129
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
+E + RKP LSGG++QR+AIARA+V +P++LLLDE + LD + + + E+KV +++
Sbjct: 130 LEEMADRKPTQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQYELKVLQRQ 189
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG 239
LG T + VTH EEAI++ DR+ ++ +G++ Q G +E++ P + VARF+G N+ +
Sbjct: 190 LGITFIFVTHDQEEAITMSDRIVLLRKGKIAQDGSPREIYEEPANLFVARFIGEINVFDA 249
Query: 240 VA----KGNILEAN------GVKITLPISVEGKVRIGVRPEDIIL 274
N++ AN + +P+ + ++++ +RPEDI++
Sbjct: 250 TVIERKSENVVLANVEGRVCDIYTDIPVKKDQQLQVLLRPEDIVI 294
>gi|10955070 agtA [Agrobacterium tumefaciens]
>gi|6689864|gb|AAF23877.1|AF117204_2 (AF242881) agtA
[Agrobacterium tumefaciens]
Length = 359
Score = 218 bits (550), Expect = 7e-56
Identities = 118/329 (35%), Positives = 195/329 (58%), Gaps = 3/329 (0%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
++S D+ + E F +LG SG+GKT LL ++AG P+EG+++++GV V+ PP KR + +
Sbjct: 26 NVSLDISQGEFFALLGSSGSGKTTLLTLLAGFDNPNEGQVLMSGVSVSDVPPHKRQIGVV 85
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
Q+YALFPH+T +N+A+ L++R ++R E + +VK ++ + L P LSGG++Q
Sbjct: 86 FQNYALFPHLTAAENVAYPLRMRGVARHEREERVKAALALVNLSDRLGAYPIQLSGGQQQ 145
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ARALV P +LL+DEP LD + + + E+K + ELG T ++VTH EA+++
Sbjct: 146 RVALARALVFSPAILLMDEPLGALDRRLRDQMQQELKRIQHELGITVIYVTHDQSEAMAM 205
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI--IEGVAKGNILEANGVKITL 255
DR+G+M GRL+QV D + +++ P VARF+G +I + G +G E G + +L
Sbjct: 206 ADRIGIMSAGRLLQVADPEAIYAAPSSHFVARFIGECSILRVSGTNEGRGYEIAGARQSL 265
Query: 256 PISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIG-GITLKA 314
P G I VRPED+ + + + A + + LG RV L++ G +L A
Sbjct: 266 PSPANGPFDIVVRPEDVAIRSPSTASIDSFGVSATIREVTYLGAGWRVALQLSDGQSLLA 325
Query: 315 FITRSSLIELGISEGREVYVSFKTSAIKV 343
+ R + ++ G V +++ ++ V
Sbjct: 326 NVMRGDDLAGSLAPGSSVNATWQPASAAV 354
>gb|AAK42960.1| ABC transporter, ATP binding protein (glucose) [Sulfolobus
solfataricus]
Length = 353
Score = 217 bits (546), Expect = 2e-55
Identities = 131/352 (37%), Positives = 210/352 (59%), Gaps = 18/352 (5%)
Query: 4 VESVSKDYKEFK---LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
V++VSK +K+ K L +++ +++ E F ILGPSGAGKT + IIAG+ P G + +
Sbjct: 6 VKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFD 65
Query: 61 GVDVTS-----YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEIS 115
V S PPE R + + Q +AL+P++T ++NIAF L ++S++EI ++V+E++
Sbjct: 66 DRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVA 125
Query: 116 KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
K+L I H+L+ PR LSGG++QRVA+ARALV +P LLLLDEPF+NLD + + +K
Sbjct: 126 KILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKE 185
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
+ LG T L V+H + ++ DRVGV+++G+LVQVG ++++ NPV VA +G N
Sbjct: 186 VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEIN 245
Query: 236 IIEGVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSA---RNEFRAEVI 292
+EG + ++ + +S + + IG+RPED+ LS + +K + + + +VI
Sbjct: 246 ELEGKVTNEGVVIGSLRFPVSVSSDRAI-IGIRPEDVKLSKDVIKDDSWILVGKGKVKVI 304
Query: 293 GIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
G + G L R+ + + F + + I G EV V + IKVF
Sbjct: 305 GYQ--GGLFRITITPLDSEEEIF----TYSDHPIHSGEEVLVYVRKDKIKVF 350
>emb|CAC11290.1| (AL445063) probable ATP-binding protein [Thermoplasma acidophilum]
Length = 317
Score = 216 bits (545), Expect = 3e-55
Identities = 109/232 (46%), Positives = 162/232 (68%), Gaps = 3/232 (1%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L + +++K Y +FK + D+S ++K E F+ILGPSG GK+ LL+II GI +PD G+II++
Sbjct: 5 LELRNINKSYGKFKVISDLSLTIEKGEFFVILGPSGTGKSTLLKIIVGIEQPDSGKIIID 64
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G DVT PP KRN+A + Q+YAL+P+M V+DNIAF L++ + I R+V E ++ LGI
Sbjct: 65 GKDVTKLPPNKRNIAMVFQNYALYPNMNVFDNIAFPLRMNHF--RNISRRVHETAQKLGI 122
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E+LL +K +SGG++QRVA+ARA+V P L LLDEP +NLD + + E+K ++EL
Sbjct: 123 ENLLDKKVTQISGGQQQRVALARAIVRNPALFLLDEPLSNLDARVRYAARNELKKIQQEL 182
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
T L VTH +EA +LGDR+GV+ G+ Q+G +E++++P V F+G
Sbjct: 183 DQTFLFVTHDQKEAEALGDRIGVLHSGKFEQIGSYEELYNDPKTVWVGDFIG 234
>pir||A70018 multiple sugar ABC transporter (ATP-bindin) homolog yurJ - Bacillus
subtilis >gi|2635752|emb|CAB15245.1| (Z99120) similar to
multiple sugar ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 367
Score = 216 bits (544), Expect = 3e-55
Identities = 128/344 (37%), Positives = 202/344 (58%), Gaps = 20/344 (5%)
Query: 2 LRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L E V K Y + ++D DVK +E +++GPSG GK+ L ++AG+ EG ++++
Sbjct: 4 LTFEHVKKSYHSQLTVKDFDLDVKDKELLVLVGPSGCGKSTTLRMVAGLESISEGNLLID 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G V PP++R++A + Q+YAL+PHMTV+DN+AFGLKLR++++QEI +V +++L I
Sbjct: 64 GERVNDLPPKERDIAMVFQNYALYPHMTVFDNMAFGLKLRKMAKQEIAERVHAAARILEI 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
EHLL RKP+ LSGG++QRVA+ R++V EP++ L+DEP +NLD + + TE+ + L
Sbjct: 124 EHLLKRKPKALSGGQRQRVALGRSIVREPKVFLMDEPLSNLDAKLRVTMRTEISKLHQRL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
T ++VTH EA+++GDR+ VM G + QV +++ P + VA F+G N ++
Sbjct: 184 EATIIYVTHDQTEAMTMGDRIVVMNEGEIQQVAKPHDIYHYPANLFVAGFIGSPGMNFLK 243
Query: 239 GVAK---GNILEANGVKITLPISVEGKVRI------------GVRPEDIILSTEPVKTSA 283
G+ + G + N I L I E R+ GVRPE I T +
Sbjct: 244 GIIEQQHGELFFTNS-SIRLHIPEEKAKRLKEKGYAGEQMIAGVRPEHITQMTGNDQL-F 301
Query: 284 RNEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGIS 327
+ F+A V E LG + V++ G LK + ++ I+ G S
Sbjct: 302 DSVFQANVEVNENLGSELIVHVMAGDERLKVRLDGNTRIDAGDS 345
>sp|P94360|MSMX_BACSU PROBABLE MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMX
>gi|7442505|pir||B69661 multiple sugar-binding transport
ATP-binding protein msmX - Bacillus subtilis
>gi|1783246|dbj|BAA11723.1| (D83026) highly homologous
to many ATP-binding transport proteins; hypothetical
[Bacillus subtilis] >gi|2636416|emb|CAB15907.1| (Z99123)
multiple sugar-binding transport ATP-binding protein
[Bacillus subtilis]
Length = 365
Score = 215 bits (543), Expect = 4e-55
Identities = 124/352 (35%), Positives = 204/352 (57%), Gaps = 24/352 (6%)
Query: 2 LRVESVSK--DYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
LR+E + K D KE + D + + +E + +GPSG GK+ L ++AG+ E +G +
Sbjct: 4 LRMEHIYKFYDQKEPAVDDFNLHIADKEFIVFVGPSGCGKSTTLRMVAGLEEISKGDFYI 63
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
G V P+ R++A + Q+YAL+PHMTVYDNIAFGLKLR++ + EI ++V+E +K+LG
Sbjct: 64 EGKRVNDVAPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRKMPKPEIKKRVEEAAKILG 123
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
+E LHRKP+ LSGG++QRVA+ RA+V + ++ L+DEP +NLD + + + E+ +
Sbjct: 124 LEEYLHRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRAEIIKLHQR 183
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NII 237
L T+++VTH EA+++ R+ VM G++ Q+G K+V+ P + V F+G N
Sbjct: 184 LQTTTIYVTHDQTEALTMATRIVVMKDGKIQQIGTPKDVYEFPENVFVGGFIGSPAMNFF 243
Query: 238 EGVAKGNILEANGVKITLPISVEGKVRI-------------GVRPEDIILSTEPVKTSAR 284
+G +++ +T+P EGK+++ G+RPEDI V++
Sbjct: 244 KGKLTDGLIKIGSAALTVP---EGKMKVLREKGYIGKEVIFGIRPEDIHDELIVVESYKN 300
Query: 285 NEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSF 336
+ +A++ E LG + + +I + FI R L I G E+ V+F
Sbjct: 301 SSIKAKINVAELLGSEIMIYSQIDN---QDFIARID-ARLDIQSGDELTVAF 348
>pir||H72690 probable spermidine/putrescine transport ATP-binding protein
APE0944 - Aeropyrum pernix (strain K1)
>gi|5104613|dbj|BAA79928.1| (AP000060) 325aa long
hypothetical spermidine/putrescine transport ATP-binding
protein [Aeropyrum pernix]
Length = 325
Score = 215 bits (542), Expect = 6e-55
Identities = 126/314 (40%), Positives = 183/314 (58%), Gaps = 19/314 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
LR +SF + +LGPSG GKT +L++IAG+++P GR+ GVD T PPE+R++
Sbjct: 4 LRGVSFSFPESSITAVLGPSGCGKTTMLKVIAGLLKPRRGRVFFGGVDYTGLPPERRSVG 63
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI---EHLLHRKPRTLS 132
++ QD ALFPHMTVYDN+AFGL+ R S E+ R+V+ + +G+ + R+ LS
Sbjct: 64 FVFQDLALFPHMTVYDNVAFGLRARGFSGGEVRRQVEWALETVGLTPPREFMGRRVTGLS 123
Query: 133 GGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFE 192
GG++QRVA+ARA+ EP +LLLDEP ++LD + + R + E+K +++LG T ++VTH
Sbjct: 124 GGQQQRVALARAIAYEPPVLLLDEPLSHLDFKIRQRLLAELKRLQRKLGSTMIYVTHDQW 183
Query: 193 EAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVK 252
EA+ L D + +M GR+VQ G EV++ P + VA F G NII K
Sbjct: 184 EAMELADTLVIMRDGRIVQHGTPSEVYTRPANVYVATFFGDANIIP-------------K 230
Query: 253 ITLPISVEGKVRIGVRPED--IILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGGI 310
L G+ I VRPED I+ + PV A V + GPL+RV L+ G
Sbjct: 231 ELLTPGSGGEWAIMVRPEDLEIVRNGSPV-PQGWPRLEAVVEDLVFQGPLIRVELRWRGG 289
Query: 311 TLKAFITRSSLIEL 324
L+A + R + L
Sbjct: 290 RLRAVVPRRTASSL 303
>sp|P31134|POTG_ECOLI PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTG
>gi|321862|pir||B45313 putrescine transport protein potG
- Escherichia coli >gi|147335|gb|AAA24410.1| (M93239)
nucleotide binding protein [Escherichia coli]
>gi|1651388|dbj|BAA35566.1| (D90723) Putrescine
transport protein PotG. [Escherichia coli]
>gi|1787079|gb|AAC73942.1| (AE000187) ATP-binding
component of putrescine transport system [Escherichia
coli K12]
Length = 404
Score = 215 bits (541), Expect = 8e-55
Identities = 124/322 (38%), Positives = 189/322 (58%), Gaps = 15/322 (4%)
Query: 1 MLRVESVSKDYK-EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L + +++K Y + + D+S + K E F +LG SG GK+ LL ++AG +P G+I+L
Sbjct: 46 LLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIML 105
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+GVD++ PP R + + Q YALFPHMTV NIAFGLK ++ + EI +V E+ ++
Sbjct: 106 DGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVH 165
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
++ RKP LSGG++QRVA+AR+L P+LLLLDEP LD + + R E+ +
Sbjct: 166 MQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILER 225
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG 239
+G T + VTH EEA+++ R+ +M RG+ VQ+G+ +E++ +P A F+G N+ EG
Sbjct: 226 VGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEG 285
Query: 240 VAK-----GNILEANGVKITLPISVEGK------VRIGVRPEDIILSTEPVKTSARNEFR 288
V K G +L++ G+ L + + V + +RPE I+L EP + N
Sbjct: 286 VLKERQEDGLVLDSPGLVHPLKVDADASVVDNVPVHVALRPEKIMLCEEP-PANGCNFAV 344
Query: 289 AEVIGIEELGPL--VRVNLKIG 308
EVI I LG L V LK G
Sbjct: 345 GEVIHIAYLGDLSVYHVRLKSG 366
>pir||A72261 spermidine/putrescine ABC transporter, ATP-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981937|gb|AAD36446.1|AE001791_8 (AE001791)
spermidine/putrescine ABC transporter, ATP-binding
protein [Thermotoga maritima]
Length = 368
Score = 214 bits (539), Expect = 1e-54
Identities = 117/294 (39%), Positives = 182/294 (61%), Gaps = 11/294 (3%)
Query: 4 VESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+++VSK + +F+ L+++S D+KK E F ILGPSG GKT LL +IAG + G ++L+G
Sbjct: 8 IKNVSKFFDDFQVLKNVSLDIKKGEFFSILGPSGCGKTTLLRVIAGFEGVESGDVLLDGK 67
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
+ + PP KR + I Q+YALFPH+TV++NIAF LKL+++S EI+++V E+ ++ +E
Sbjct: 68 SILNLPPNKRPVNIIFQNYALFPHLTVFENIAFPLKLKKLSENEINQRVNELLSLIRMEE 127
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
+ P LSGG+KQRVAIARAL EP +LLLDEP + LD + + + E+ +G
Sbjct: 128 HAQKMPSQLSGGQKQRVAIARALANEPRVLLLDEPLSALDAKLRQELLVELDNLHDRVGI 187
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAK 242
T ++VTH EAIS+ DRV +M G +VQVG EV+ +PV+ A F+G N++ K
Sbjct: 188 TFIYVTHDQAEAISVSDRVALMNEGEIVQVGTPYEVYESPVNVFAATFIGETNLM----K 243
Query: 243 GNILEANGVKITLPISVEGKVRI-----GVRPEDIILSTEPVKTS-ARNEFRAE 290
++E + G+ R + + ++++ P K +R +FR+E
Sbjct: 244 AEVVEVEDEYYVVESPGIGQFRCYRDKEAKKGDRLLITLRPEKIRISRKQFRSE 297
>pir||E71123 probable sugar transport ATP-binding protein - Pyrococcus
horikoshii >gi|3257164|dbj|BAA29847.1| (AP000003) 357aa
long hypothetical sugar transport ATP-binding protein
[Pyrococcus horikoshii]
Length = 357
Score = 213 bits (537), Expect = 2e-54
Identities = 124/290 (42%), Positives = 185/290 (63%), Gaps = 15/290 (5%)
Query: 19 ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYIP 78
++ +VK E ++LGPSG GK+ L +IAG+ P EG I + V P KRN+A +
Sbjct: 22 LNLEVKDGEFMVLLGPSGCGKSTTLRLIAGLETPTEGEIWIGDKLVNDIDPTKRNVAMVF 81
Query: 79 QDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQR 138
Q+YAL+PHMTV+ NI F LK+ + + E +KVKEI+ LGI LL+RKP LSGG++QR
Sbjct: 82 QNYALYPHMTVFGNIEFPLKMAGVPKSERIKKVKEIADFLGIGDLLNRKPSELSGGQQQR 141
Query: 139 VAIARALVIEPELLLLDEPFANLDVQTKSRFMTEM-KVWRKELGFTSLHVTHSFEEAISL 197
VA+ARALV EPE+ LLDEP +NLD + +++ E+ K+ +L T+++VTH EA+++
Sbjct: 142 VALARALVREPEVFLLDEPLSNLDAKIRTQMRFELKKLLSYDLKITTIYVTHDQVEAMTM 201
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEG-VAKGN---ILEANGV 251
DR+ VM +G + QVG E+F P + VA F+G N+IEG + K + I +
Sbjct: 202 ADRIAVMNKGVIQQVGTPDEIFYKPKNTFVATFVGSPQMNLIEGEIIKKDGKVIFDCGEF 261
Query: 252 KITLP--ISVEGKVRIGVRPEDIILSTEPVKTSARNEF-RAEVIGIEELG 298
+ LP +++EG+V +G RP+ + +S P R +F ++IGIE+LG
Sbjct: 262 SLRLPEDLNIEGRVILGFRPQHVEVSEMP-----REDFIEGKLIGIEKLG 306
>emb|CAC11826.1| (AL445065) probable sugar ABC transporter, ATP-binding protein
[Thermoplasma acidophilum]
Length = 372
Score = 212 bits (535), Expect = 4e-54
Identities = 122/353 (34%), Positives = 216/353 (60%), Gaps = 20/353 (5%)
Query: 4 VESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+E+++ Y + + L++ + V+ E F+ILG SG+GKT LL IAG+I D+GRI+++G
Sbjct: 5 IENLTARYGDKYILKNFNLRVEDGEFFVILGSSGSGKTTLLRSIAGLIPIDDGRILIDGN 64
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
DVT P RN+A + Q++AL+PHMTVYDNI+ LK++ + + EI +KV +++++L I
Sbjct: 65 DVTDLYPSDRNIAMVFQNFALYPHMTVYDNISLNLKIKHVPKDEIKKKVSDVAEMLHISQ 124
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
L + PR LSGGE+QRV IARA+V +P + L+DEP +NLD + + + E++ + +++
Sbjct: 125 HLQKYPRQLSGGEQQRVGIARAMVRDPSVFLMDEPLSNLDAKLRREMLGELRSFHEKVKK 184
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE-- 238
T ++V H +EA++L DR+ V+ +G+++Q+G E++ +P + VA F+G NI+E
Sbjct: 185 TIIYVCHDQDEAMALADRILVLNQGQIMQLGTPDELYDHPANVFVAGFIGNPPMNILECD 244
Query: 239 -----GVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIG 293
G + +++ + +++ I EGK+ IG+RPE I LS +++ + F +
Sbjct: 245 AEEKSGGTRIDVMNSGYLEVDDEIP-EGKMFIGIRPELIGLSDHDGISASFDYFINSGLN 303
Query: 294 IEELGPLVRVNLKIGGITLKAFITRSSLIE--LGISEGREVYVSFKTSAIKVF 344
E V++KIG ++A I + + + G +++ K I ++
Sbjct: 304 AE-------VHVKIGDTPIRAVIPKEEIPANLRDLRNGESIHLKVKPGTIYLY 349
>gi|10954682 probable mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes] >gi|8918682|dbj|BAA97747.1|
(AB039932) hypothetical ABC-transporter gene~similar to
potA gene [Agrobacterium rhizogenes]
>gi|10567346|dbj|BAB16155.1| (AP002086) probable
mikimopine transporter gene~similar to potA gene
[Agrobacterium rhizogenes]
Length = 352
Score = 212 bits (535), Expect = 4e-54
Identities = 117/281 (41%), Positives = 182/281 (64%), Gaps = 8/281 (2%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ V+++SK + +FK L +I+ DV++ E ILGPSG GK+ LL IIAG+ P +G I++
Sbjct: 4 ISVKNISKSWADFKALNNINLDVREGEFLSILGPSGCGKSTLLRIIAGLESPTDGDIVIA 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G VT+ P KR + ++ Q++AL+PH+TV+ N+A GL+LR+ + E+ ++V + +++ +
Sbjct: 64 GKQVTNDPVWKRKIGFVFQNFALWPHLTVFKNVAMGLELRKTPKDELQQRVTKALRMVQL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E L R P LSGG++QRVA+ARA+V++P++LLLDEP + LD + E+K ++ L
Sbjct: 124 EALADRLPSQLSGGQQQRVALARAIVLKPDVLLLDEPLSALDKNLRQDMQVELKALQRTL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G T++ VTH EEA+SL DRV VM RG + Q+ +++ PV E VARF+G +G
Sbjct: 184 GLTTVFVTHDQEEALSLSDRVVVMNRGVIEQLDTPDNIYNKPVSEYVARFVGEAFFFKGE 243
Query: 241 AKGN---ILE---ANGVKITLPISVEGKVRIGVRPEDIILS 275
G+ +L+ A VK +P + GK VRPE + LS
Sbjct: 244 VTGSNELVLDGGNAVAVKSDVP-AAAGKAVAFVRPEWVSLS 283
>dbj|BAA95937.1| (AB035092) Orf5 [Clostridium perfringens]
Length = 369
Score = 212 bits (533), Expect = 7e-54
Identities = 119/326 (36%), Positives = 192/326 (58%), Gaps = 16/326 (4%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
++D + ++ +E + +GPSG GK+ L +IAG+ E +G + + V P++R++A
Sbjct: 20 VKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISKGELYIGDRLVNEVEPKERDIA 79
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q YAL+PHMTVYDN+AFGLKLR++ + EID+KVK+ +K+L IEHLL RKP+ LSGG+
Sbjct: 80 MVFQSYALYPHMTVYDNMAFGLKLRKVPKDEIDKKVKDAAKILDIEHLLDRKPKALSGGQ 139
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ RA+V EP++ L+DEP +NLD + + + TE+ + L T ++VTH EA+
Sbjct: 140 RQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRTEISKLHQRLQTTFIYVTHDQVEAM 199
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEGVAK---GNILEA-N 249
++G R+ VM G + QV +E+++NP + VA F+G N I+G K G
Sbjct: 200 TMGTRIVVMKDGIVQQVDSPQEIYNNPANIFVAGFIGSPQMNFIDGTIKEEGGKYFACFQ 259
Query: 250 GVKITLPIS----------VEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGP 299
KI +P+ + V IGVRPE + E + + +++V E +G
Sbjct: 260 SEKIEMPMDKARLLKEKGYIGKNVIIGVRPEHLDDDQELGEGKSTTVIKSKVEVTELMGA 319
Query: 300 LVRVNLKIGGITLKAFITRSSLIELG 325
+ K+G + + S+ ++ G
Sbjct: 320 ESYIYTKLGDQNITVRVNGSTKLQNG 345
>pir||H83609 sulfate transport protein CysA PA0280 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946123|gb|AAG03669.1|AE004466_3 (AE004466) sulfate
transport protein CysA [Pseudomonas aeruginosa]
Length = 329
Score = 211 bits (532), Expect = 9e-54
Identities = 126/348 (36%), Positives = 193/348 (55%), Gaps = 33/348 (9%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ + +VSK++ FK L DI+ D++ E +LGPSG GKT LL IIAG+ PD G I+ +
Sbjct: 3 IEIRNVSKNFNAFKALDDINLDIQSGELVALLGPSGCGKTTLLRIIAGLETPDAGNIVFH 62
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLR----RISRQEIDRKVKEISK 116
G DV+ + RN+ ++ Q YALF HMTV+DN+AFGL+++ R I KV E+
Sbjct: 63 GEDVSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKGERPGESAIKAKVHELLN 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ ++ L R P LSGG++QR+A+ARAL +EP++LLLDEPF LD + + +
Sbjct: 123 MVQLDWLADRYPEQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLARL 182
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
+E+ TS+ VTH EEA+ + DR+ VM +G + Q+G EV+ NP + V FLG N
Sbjct: 183 HEEINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGSPGEVYENPASDFVYHFLGDSNR 242
Query: 237 IEGVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEE 296
++ ++L RP ++ LS +++ AEV I
Sbjct: 243 LQLGNDQHLL--------------------FRPHEVSLS----RSAVAEHRAAEVRDIRP 278
Query: 297 LGPLVRVNLKIGG--ITLKAFITRSSLIELGISEGREVYVSFKTSAIK 342
LG + RV LK+ G ++A + + G++ G +Y FK A +
Sbjct: 279 LGAITRVTLKVDGQDELIEAEVVKDHDSLAGLARGETLY--FKPKAFQ 324
>gb|AAC62409.1| (AF084104) maltose transportor ATP-binding protein [Bacillus
firmus]
Length = 366
Score = 211 bits (531), Expect = 1e-53
Identities = 113/322 (35%), Positives = 188/322 (58%), Gaps = 12/322 (3%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
D + D+K +E + +GPSG GK+ L +IAG+ + +G + + V P+ R++A +
Sbjct: 22 DFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGDLYIGDRRVNDVAPKDRDIAMV 81
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
Q+YAL+PHM VY+N+AFGLKLR+ + EIDR+V++ +K+LG+E +L RKP+ +SGG++Q
Sbjct: 82 FQNYALYPHMNVYENMAFGLKLRKFKKDEIDRRVRDAAKILGLEAMLDRKPKAMSGGQRQ 141
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ RA+V +P++ L+DEP +NLD + + + E+ K L T+++VTH EA+++
Sbjct: 142 RVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMRAEITKLHKRLQTTTIYVTHDQTEAMTM 201
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEGVAKGNILEANGVKITL 255
R+ +M G + QVG K+V+ NP + V F+G N I G +G+ + V + +
Sbjct: 202 ATRIVIMKDGFIQQVGTPKDVYDNPENVFVGGFIGSPSMNFITGKIEGDYFKVGDVTVKV 261
Query: 256 PIS----------VEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNL 305
P + ++ +G+RPEDI +++S + AE+ E G +
Sbjct: 262 PAGKLSVLRDKGYMNKEIILGIRPEDIHDELLFIESSPETKLTAEIDVAELTGAETVLYS 321
Query: 306 KIGGITLKAFITRSSLIELGIS 327
+ G A I + IE G S
Sbjct: 322 SVNGQAFVARIDSRTDIEGGQS 343
>dbj|BAB04795.1| (AP001510) sugar ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 378
Score = 210 bits (530), Expect = 1e-53
Identities = 115/318 (36%), Positives = 187/318 (58%), Gaps = 15/318 (4%)
Query: 8 SKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSY 67
S D F + DI+ +K+ E FI++GPSG GK+ +L +IAG+ + G + ++G
Sbjct: 12 SYDQTTFAVEDINVSIKEGEFFILVGPSGCGKSTMLRMIAGLEDISAGELKIHGATANHL 71
Query: 68 PPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRK 127
PP KRNL+ + Q+YAL+PH+TV +NI FGLK+R++ + E + + + +LG+ L RK
Sbjct: 72 PPSKRNLSMVFQNYALYPHLTVEENILFGLKVRKVKKAERSERCQRAAAMLGLTDYLKRK 131
Query: 128 PRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHV 187
PR LSGG++QRVA+ARA+V E L L+DEP +NLD + + TE++ +++LG T ++V
Sbjct: 132 PRELSGGQRQRVALARAVVSEAPLCLMDEPLSNLDAKLRGHMRTEIRQLQRQLGMTMIYV 191
Query: 188 THSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILE 247
TH EA+++GDR+ V+ G++ QVG ++++ P + VA F+G + +AK +
Sbjct: 192 THDQVEAMTMGDRIMVLKDGQVQQVGSPLDIYNAPANLFVATFIGAPPM--NIAKATVDR 249
Query: 248 ANGV----KITLPISVE-------GKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEE 296
N + LPI + V++G+RPE I + P T ++ + +E
Sbjct: 250 MNRELAIGSLRLPIEEQLLMRISSDTVQLGIRPEQIARADAP--TPEHVQWHVTLTNVEV 307
Query: 297 LGPLVRVNLKIGGITLKA 314
LG + K+G KA
Sbjct: 308 LGNETLLAFKVGEHEWKA 325
>dbj|BAB04859.1| (AP001511) sugar ABC transportor (ATP-binding protein) [Bacillus
halodurans]
Length = 365
Score = 210 bits (528), Expect = 3e-53
Identities = 114/299 (38%), Positives = 182/299 (60%), Gaps = 25/299 (8%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
D + D+K +E + +GPSG GK+ L +IAG+ + +G +++ G + P+ R++A +
Sbjct: 22 DFNLDIKDKEFIVFVGPSGCGKSTTLRMIAGLEDISKGDLLIGGKRMNDVAPKDRDIAMV 81
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
Q+YAL+PHM VYDN+AFGLKLR+ + EID++VK +K+LG+E +L RKP+ +SGG++Q
Sbjct: 82 FQNYALYPHMNVYDNMAFGLKLRKFKKDEIDKRVKNAAKILGLEEMLDRKPKAMSGGQRQ 141
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ RA+V +P++ L+DEP +NLD + + + E+ + L T+++VTH EA+++
Sbjct: 142 RVALGRAIVRDPQVFLMDEPLSNLDAKLRVQMRAEITKLHQRLQTTTIYVTHDQTEAMTM 201
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEGVAKGNILEANGVKITL 255
R+ +M G + QVG KEV+ P + V F+G N + G +G+ L+ V I +
Sbjct: 202 ATRIVIMKDGVIQQVGSPKEVYDFPENVFVGGFIGSPSMNFLNGRLEGSQLKIGNVSIEV 261
Query: 256 PISVEGKVRI-------------GVRPEDI------ILSTEPVKTSARNEFRAEVIGIE 295
P EGK+ + G+RPEDI I S+ K +A E AE+ G E
Sbjct: 262 P---EGKLAVLREHGYEGKELILGIRPEDIHDELLFIESSPGSKITAHIEV-AELTGAE 316
>emb|CAB65650.1| (AJ252160) putative ABC-transporter ATP-binding protein
[Alicyclobacillus acidocaldarius]
Length = 393
Score = 209 bits (527), Expect = 3e-53
Identities = 106/261 (40%), Positives = 165/261 (62%), Gaps = 2/261 (0%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
+R +SF +++ E +LGPSG+GKT +L +IAG+ P +G + + G VT PP+KRN+
Sbjct: 19 VRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVG 78
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q+YALF HMTVYDN++FGL+ +R+ + E+D +V+E+ + + +E +R P LSGG+
Sbjct: 79 LVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQ 138
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ARAL P++LL DEPFA +D Q + T ++ E+G TS+ VTH EEA+
Sbjct: 139 QQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEAL 198
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITL 255
+ DRV V+ G + Q G +EV+ P VA F+G N+ + +E G + +
Sbjct: 199 EVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPV 258
Query: 256 --PISVEGKVRIGVRPEDIIL 274
+S +V + VRP+D+ L
Sbjct: 259 DPAVSEGSEVAVVVRPKDVEL 279
>pir||E75412 spermidine/putrescine ABC transporter, ATP-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6459050|gb|AAF10872.1|AE001977_5 (AE001977)
spermidine/putrescine ABC transporter, ATP-binding
protein [Deinococcus radiodurans]
Length = 362
Score = 209 bits (526), Expect = 4e-53
Identities = 118/313 (37%), Positives = 183/313 (57%), Gaps = 19/313 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
L+DI D+++ E F +LGPSG GKT LL I+AG + D G +++ G D+T P +R +
Sbjct: 21 LKDIDLDIRRGEFFSLLGPSGCGKTTLLRILAGFEQADSGAVVIGGRDMTGIPAHRRPVN 80
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q YALFPH++V DN+AFGLK + + E+ ++V+ + + I +RKP LSGG+
Sbjct: 81 TVFQSYALFPHLSVADNVAFGLKQKGVRGAELRQRVERAMETVQIGQFGNRKPDQLSGGQ 140
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ARA+V +PE+LLLDEP + LD++ + + E+ +++LG T + VTH EEA+
Sbjct: 141 RQRVALARAIVNQPEVLLLDEPLSALDLKLRKQLQVELSNLQEDLGITFVFVTHDQEEAL 200
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITL 255
+ DR+ VM +GR+ Q+G ++++ P VA FLG N++ G + E +G + T+
Sbjct: 201 VMSDRIAVMNQGRIEQLGRAEDLYERPRTAFVANFLGSSNLL----AGRVAELHGTEATV 256
Query: 256 P-------------ISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVR 302
+SV +V + +RPE L E + NE RA V I G +
Sbjct: 257 QTEFGPLRTLHGAGLSVGQEVTLSIRPEK--LRMERDDETEGNEVRARVDDIVYTGAENQ 314
Query: 303 VNLKIGGITLKAF 315
L+ G L AF
Sbjct: 315 YLLEAHGQRLVAF 327
>pir||D75308 sugar ABC transportor, ATP-binding protein - Deinococcus
radiodurans (strain R1)
>gi|6459951|gb|AAF11701.1|AE002049_6 (AE002049) sugar
ABC transportor, ATP-binding protein [Deinococcus
radiodurans]
Length = 455
Score = 209 bits (526), Expect = 4e-53
Identities = 118/334 (35%), Positives = 197/334 (58%), Gaps = 12/334 (3%)
Query: 4 VESVSKDY--KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNG 61
+E V+K Y K+ ++D + ++ E + +GPSG GK+ L +IAG+ + +G + +
Sbjct: 41 LEHVNKYYGNKQHAVKDFNLEIADREFMVFVGPSGCGKSTTLRMIAGLEDISDGVLRIGD 100
Query: 62 VDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIE 121
V PP+ R++A + Q+YAL+PHM VY+N+AFGLKLR+ R+EID++V++ +++L IE
Sbjct: 101 RVVNDVPPKDRDIAMVFQNYALYPHMNVYENMAFGLKLRKTPREEIDKRVRDAARILQIE 160
Query: 122 HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELG 181
HLL RKP+ LSGG++QRVA+ RA+V EP + L+DEP +NLD + + +++ + LG
Sbjct: 161 HLLGRKPKELSGGQRQRVAMGRAIVREPSVFLMDEPLSNLDAKLRVEMRSQISQLHRRLG 220
Query: 182 FTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENII---- 237
T ++VTH EA++LG+R+ VM G ++QV ++ P + VA F+G ++
Sbjct: 221 ATIIYVTHDQVEAMTLGNRIVVMRDGVIMQVDTPMNLYDFPQNRFVAGFIGSPSMNFLTA 280
Query: 238 -----EGVAKGNILEANGVKITLPISVEGK-VRIGVRPEDIILSTEPVKTSARNEFRAEV 291
E V + + A G + EG+ V +G+RPE + L RN R EV
Sbjct: 281 RVQNGEFVIGQSQVAAMGRLAESLRAYEGREVFLGIRPEHVGLVGHSDLPQGRNVLRGEV 340
Query: 292 IGIEELGPLVRVNLKIGGITLKAFITRSSLIELG 325
+ +E LG + + + G + A + + ++ G
Sbjct: 341 VVVESLGAQTDLIVDVAGQQVTAKVEGMAPVQPG 374
>pir||H82694 sulfate ABC transporter ATP-binding protein XF1347 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106344|gb|AAF84156.1|AE003966_17 (AE003966) sulfate
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 348
Score = 208 bits (525), Expect = 6e-53
Identities = 120/317 (37%), Positives = 188/317 (58%), Gaps = 22/317 (6%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R++ + K +++F L I D+++ E +LGPSG+GKT LL IIAG+ D GR++
Sbjct: 3 IRIQELCKQFEDFTALAGIDLDIRQGELLALLGPSGSGKTTLLRIIAGLEHADAGRVLFG 62
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQ----EIDRKVKEISK 116
D T + R + ++ Q YALF HM+VY+N+AFGL++RR + +I +V E+
Sbjct: 63 DEDATMMSVQARRVGFVFQHYALFKHMSVYENVAFGLRVRRGKARWPESQISARVFELLS 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ ++ L R P LSGG++QRVA+ARAL IEP +LLLDEPF LD Q + +++ W
Sbjct: 123 LVQLDGLEQRYPMQLSGGQRQRVALARALAIEPRVLLLDEPFGALDAQVR----RDLRRW 178
Query: 177 RKEL----GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
+E+ G T++ VTH EEA+ L DRV ++ +GR+ QV EV++ P V F+G
Sbjct: 179 LREIHDRTGLTTVFVTHDQEEALELADRVAILNQGRIEQVASPAEVYNRPSSPFVYSFVG 238
Query: 233 FENIIEGVAKGNILEANGVKITLP--ISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAE 290
N + G + LE G+ ++ P +S G V + VRPED++L A+ + A
Sbjct: 239 AVNRLPGCVGADGLEVAGIVLSCPPQLSGWGAVDLYVRPEDLVL-------DAQEGWLAI 291
Query: 291 VIGIEELGPLVRVNLKI 307
V+ + GP +RV ++
Sbjct: 292 VLWSQRSGPRMRVRARL 308
>pir||F82201 spermidine/putrescine ABC transporter, ATP-binding protein VC1428
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9655926|gb|AAF94585.1| (AE004221)
spermidine/putrescine ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 377
Score = 208 bits (524), Expect = 7e-53
Identities = 111/294 (37%), Positives = 187/294 (62%), Gaps = 15/294 (5%)
Query: 1 MLRVESVSKDY--KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
++R+ +SK + KE + +++ DV E ILGPSG GKT +L +IAG D+G+I+
Sbjct: 17 VIRLSGISKSFDGKEI-IGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQIL 75
Query: 59 LNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
L+ DVT P E+R++ + Q YALFPHMTV++N+AFGL+++++ + EI+ +V E +++
Sbjct: 76 LDDQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMV 135
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
+ + RKP LSGG++QR+AIARA+V +P++LLLDE + LD + + + +E+K ++
Sbjct: 136 RLAEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQR 195
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
+LG T + VTH EEA+S+ DR+ VM G++ Q G +E++ +P + VARF+G N+ +
Sbjct: 196 QLGITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQ 255
Query: 239 GVAKGNI------LEANGVKITL----PISVEGKVRIGVRPEDIILSTEPVKTS 282
I ++ G++ + + K+++ +RPED L E +K S
Sbjct: 256 ATTIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPED--LRIEEIKES 307
>gb|AAK41273.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 324
Score = 208 bits (524), Expect = 7e-53
Identities = 103/229 (44%), Positives = 160/229 (68%)
Query: 4 VESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVD 63
++ V K K + I+ ++ E F+ILGPSG GK+ LL+I+AGI + D+G+II +G D
Sbjct: 6 IDIVKKYGKNIVINGITEKIETGEFFVILGPSGEGKSTLLKILAGIEKLDKGKIIADGAD 65
Query: 64 VTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHL 123
+T PPEKRN+A + Q+YAL+P+M+V DNIAF LK+R + ++EI +V++ +K+LGI +
Sbjct: 66 ITDKPPEKRNVAMVFQNYALYPNMSVRDNIAFPLKMRGMKKEEIIERVEKAAKLLGISEI 125
Query: 124 LHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFT 183
L +K +SGG++QRVA+ARA+V P LLDEP +NLD + ++ E+K +KEL T
Sbjct: 126 LDKKVTQISGGQQQRVALARAIVRNPSYFLLDEPLSNLDARVRTTARGELKRIQKELKGT 185
Query: 184 SLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
++VTH +EA+SL DR+ ++ +G+ QV D K ++ P + VA+F+G
Sbjct: 186 FIYVTHDQKEALSLADRIAILHKGKFEQVSDPKTLYEYPKTKWVAQFVG 234
>gb|AAK42824.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 314
Score = 207 bits (521), Expect = 2e-52
Identities = 109/275 (39%), Positives = 180/275 (64%), Gaps = 20/275 (7%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ ++ V+K + FK+ D IS +V+K E F+ILG SG+GKT LL +IAG+ + G+I++
Sbjct: 1 MITLKEVTKFFGSFKVIDSISLNVEKGEFFVILGKSGSGKTTLLRLIAGLEKVSSGKILI 60
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+ DVT PP KR++ + Q YAL+P+ V++N+ L+ I++++ + ++ EISK L
Sbjct: 61 SNEDVTDLPPSKRDIGMVFQSYALYPNKKVFENLMIALENSEINKKDKEERIIEISKQLE 120
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
I HL+ + P LSGG++QRVAIA+ALV P++LL+DEP +NLDVQ + +K +KE
Sbjct: 121 IYHLMDKYPAQLSGGQQQRVAIAKALVKRPKVLLMDEPLSNLDVQLRYSARKLIKKVQKE 180
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG 239
T+++VTH EA+++ DR+GV+ +GRL+QVG +++++NP+ + VA +G +
Sbjct: 181 FNITTIYVTHDSNEALAIADRIGVIDKGRLLQVGIPEDIYNNPLSKEVASLVGNPPMSF- 239
Query: 240 VAKGNILEANGVKITLPISVEGKVRIGVRPEDIIL 274
+ ++GK+ IGVRP++II+
Sbjct: 240 -----------------VKIDGKI-IGVRPDNIII 256
>gi|11466425 probable transport protein [Mesostigma viride]
>gi|7259568|gb|AAF43869.1|AF166114_81 (AF166114)
probable transport protein [Mesostigma viride]
Length = 348
Score = 206 bits (520), Expect = 2e-52
Identities = 116/345 (33%), Positives = 199/345 (57%), Gaps = 21/345 (6%)
Query: 4 VESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
++++SK + F+ L I+ ++K +LGPSG+GK+ LL IIAG+ PDEG I ++G
Sbjct: 5 IDNISKKFGNFQALNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGLDTPDEGTIWISGK 64
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
+ + Y + RN+ ++ Q+YALF +MTVYDNIAFGL+LRRIS +I RKV ++ +++ +++
Sbjct: 65 NASGYSIQSRNIGFVFQNYALFKNMTVYDNIAFGLELRRISFNDISRKVNKLLELVQLQN 124
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
L HR P LSGG++QR+A+ARAL IEP++LLLDEPF LD + + ++ +
Sbjct: 125 LGHRYPAQLSGGQRQRIALARALAIEPKVLLLDEPFGALDARVRKNLRAWLRDLHNKFSI 184
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG------FENI 236
T++ VTH +EA+ + D + V GR+ Q+G ++++ P V LG F+N
Sbjct: 185 TTIIVTHDQQEAMEIADEIVVFNSGRIEQIGKPQDIYDQPATPFVFSLLGYVNKISFDNE 244
Query: 237 IEGVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEE 296
I + E V + + + +RP I++S K S + + A++ +
Sbjct: 245 IANFLLSSFPEKQSVLMQ-------EKQFYIRPHQIVIS----KQSNESNYSAKIENLLY 293
Query: 297 LGPLVRVNLKIG--GITLKAFITRSSLIELGISEGRE-VYVSFKT 338
+G + +++ + + LK ++ L + +E +YVS ++
Sbjct: 294 IGNWIHLDIYVASFNVNLKVHVSPKEFDNLQLKSFQENIYVSLRS 338
>pir||H83240 probable ATP-binding component of ABC transporter PA3254 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949377|gb|AAG06642.1|AE004747_15 (AE004747)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 331
Score = 206 bits (519), Expect = 3e-52
Identities = 115/318 (36%), Positives = 181/318 (56%), Gaps = 17/318 (5%)
Query: 4 VESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
VE + K Y + RDI F + E +LGPSG GK+ LL IAG+ E D GRI+++G
Sbjct: 6 VEQLDKSYGATSIFRDIDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTEVDSGRILIDGE 65
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
DV PP+KR +A + Q YALFP+MTV N+AFGL+++++ E+ ++V E +++ +
Sbjct: 66 DVVPLPPQKRGIAMVFQSYALFPNMTVQQNVAFGLRMQKVPAAELKQRVAEAIELVELGE 125
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
R P LSGG+ QRVA+AR+LV P LLLLDEP + LD + + +++ ++ELG
Sbjct: 126 YAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRRIQQELGL 185
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAK 242
T++ VTH EEA++L DR+ +M GR+VQ GD + +++ P + A F+G N+++
Sbjct: 186 TTVFVTHDQEEALTLSDRIVLMNAGRIVQSGDAETLYTAPENAFAAGFIGNYNLLDAEQA 245
Query: 243 GNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVR 302
+L + + ++ +RPE + L EP A V LG ++R
Sbjct: 246 SRLLGQSCAQ-----------QVAIRPESLRLGNEP-----SEGVPALVRSHSLLGNVIR 289
Query: 303 VNLKIGGITLKAFITRSS 320
++ G+ L + S
Sbjct: 290 YRVEAAGVELTVDVLNRS 307
>sp|P55453|Y4FO_RHISN PUTATIVE ABC TRANSPORTER ATP-BINDING PROTEIN Y4FO
>gi|2182398|gb|AAB91671.1| (AE000073) Y4fO [Rhizobium
sp. NGR234]
Length = 339
Score = 206 bits (518), Expect = 4e-52
Identities = 117/329 (35%), Positives = 188/329 (56%), Gaps = 22/329 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
+RD++ DV +LGPSG+GK+ +L IAG++ GR++L G D+T+ PPE+RN+
Sbjct: 28 VRDLNLDVADGAFVSLLGPSGSGKSSVLRTIAGLLPALGGRVLLEGQDITALPPERRNVG 87
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q+YALFP M+ ++NIAF L++ + S+ E++R+V E++++ GI L +KP +SGG+
Sbjct: 88 IVFQNYALFPTMSAFENIAFALRVAKKSKAEVERRVGEVAEMAGISDQLDKKPANMSGGQ 147
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVAIARALV +LL DEP +NLD + ++ E+K + ELGFT++ VTH E+A+
Sbjct: 148 QQRVAIARALVTGSRVLLFDEPLSNLDAKVRAAMRKEIKRLQSELGFTAIFVTHDQEDAL 207
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITL 255
++ D + V+ G++ Q+GD + ++ P + F+G N + +L
Sbjct: 208 TMSDLIVVLNHGKIEQIGDGRTLYRKPATPFICEFIGVSNELAPPLAARLL--------- 258
Query: 256 PISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGGITLKAF 315
+ K R +R ED++L A A V +E LG RV+L++ G L A
Sbjct: 259 --GYDVKGRSFLRHEDVLL-------GAVAGVPARVNHVEFLGAHSRVDLEVEGHALSAM 309
Query: 316 ITRSSLIELGISEGREVYVSFKTSAIKVF 344
+ L E G V + + A VF
Sbjct: 310 LIGDQLPE----PGSTVSLGIRPGAAHVF 334
>sp|Q00752|MSMK_STRMU MULTIPLE SUGAR-BINDING TRANSPORT ATP-BINDING PROTEIN MSMK
>gi|282320|pir||E42400 ABC-type transport system
ATP-binding protein msmK [validated] - Streptococcus
mutans >gi|153741|gb|AAA26938.1| (M77351) ATP-binding
protein [Streptococcus mutans]
Length = 377
Score = 206 bits (518), Expect = 4e-52
Identities = 120/353 (33%), Positives = 199/353 (55%), Gaps = 32/353 (9%)
Query: 2 LRVESVSKDY---KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
L + + K Y + + D D+K +E + +GPSG GK+ L ++AG+ + +G +
Sbjct: 4 LNLNHIYKKYPNSSHYSVEDFDLDIKNKEFIVFVGPSGCGKSTTLRMVAGLEDITKGELK 63
Query: 59 LNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
++G V P+ R++A + Q+YAL+PHM+VYDN+AFGLKLR S++ ID++VKE +++L
Sbjct: 64 IDGEVVNDKAPKDRDIAMVFQNYALYPHMSVYDNMAFGLKLRHYSKEAIDKRVKEAAQIL 123
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G+ L RKP LSGG++QRVA+ RA+V + ++ L+DEP +NLD + + E+ +
Sbjct: 124 GLTEFLERKPADLSGGQRQRVAMGRAIVRDAKVFLMDEPLSNLDAKLRVSMRAEIAKIHR 183
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLR----------GRLVQVGDVKEVFSNPVDEGVA 228
+G T+++VTH EA++L DR+ +M GR+ QVG +E+++ P ++ VA
Sbjct: 184 RIGATTIYVTHDQTEAMTLADRIVIMSSTKNEDGSGTIGRVEQVGTPQELYNRPANKFVA 243
Query: 229 RFLGFE--NIIEGVAK-GNILEANGVKITLPISVEGKVRI-------------GVRPEDI 272
F+G N + K G+++ +G+ I + EG++++ G+RPEDI
Sbjct: 244 GFIGSPAMNFFDVTIKDGHLVSKDGLTIAV---TEGQLKMLESKGFKNKNLIFGIRPEDI 300
Query: 273 ILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELG 325
S +T AEV+ E LG + LK+G A + E G
Sbjct: 301 SSSLLVQETYPDATVDAEVVVSELLGSETMLYLKLGQTEFAARVDARDFHEPG 353
>pir||T35802 probable polyamine ABC-transporter ATP-binding protein -
Streptomyces coelicolor >gi|3413309|emb|CAA20221.1|
(AL031225) putative polyamine ABC-transporter
ATP-binding p rotein [Streptomyces coelicolor A3(2)]
Length = 397
Score = 205 bits (517), Expect = 5e-52
Identities = 114/287 (39%), Positives = 170/287 (58%), Gaps = 15/287 (5%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R+ +SK Y F + + V + F +LG SG GKT L +IAG+ EP G + L
Sbjct: 19 VRLAGISKTYGSFTAVHPLDLTVPQGSFFALLGASGCGKTTTLRMIAGLEEPSGGTVHLG 78
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
DVT+ PP KR + + Q YALFPH+ +Y+N+AFGL+ R I + + ++V E+ ++ +
Sbjct: 79 DQDVTALPPYKRPVNTVFQSYALFPHLDIYENVAFGLRRRGI--KSVKKQVGEMLDLVQL 136
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+KP LSGG++QRVA+ARAL+ P++LLLDEP LD++ + + E+K + E+
Sbjct: 137 GEQARKKPHQLSGGQQQRVAVARALINHPKVLLLDEPLGALDLKLRRQMQLELKRIQTEV 196
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG- 239
G T +HVTH EEA+++ D+V VM GR+ Q+G +++ NP VA FLG N+IE
Sbjct: 197 GITFVHVTHDQEEAMTMADQVAVMNAGRVEQLGAPADLYENPRTTFVANFLGTSNLIEAE 256
Query: 240 -----------VAKGNILEANGVKITLPISVEGKVRIGVRPEDIILS 275
A G+ L G + + P GKV +GVRPE I L+
Sbjct: 257 VDTRSGDDVVVKAAGDKLVLPGARCSAPAKTGGKVLVGVRPEKISLT 303
>pir||E83248 probable ATP-binding component of ABC transporter PA3187 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949305|gb|AAG06575.1|AE004742_11 (AE004742)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 386
Score = 205 bits (516), Expect = 6e-52
Identities = 118/299 (39%), Positives = 184/299 (61%), Gaps = 20/299 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
LRDI + E I++GPSG GK+ L+ IAG+ G I+++G D++ P+ R++A
Sbjct: 21 LRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGGAILVDGQDISGMSPKDRDIA 80
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q YAL+P M+V +NIAFGLK+R++ + ID +V ++++L IEHLL RKP LSGG+
Sbjct: 81 MVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDEEVARVARLLQIEHLLERKPSQLSGGQ 140
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ RAL P++ L DEP +NLD + + TE+K+ + L T+++VTH EA+
Sbjct: 141 QQRVAMGRALARRPKVYLFDEPLSNLDAKLRVEMRTELKLMHQRLKTTTVYVTHDQIEAM 200
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NII-------EGVAKGNIL 246
+LGD+V VM G + Q G ++++++P + VA F+G N I +G G +L
Sbjct: 201 TLGDKVAVMKDGVIQQFGTPQQIYNDPANLFVASFIGSPPMNFIPLRLQRRDGRWTG-LL 259
Query: 247 EANGVKITLPISVE------GKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGP 299
++ +I LP+S+E ++ +GVRPE I L SA ++ R EV +E GP
Sbjct: 260 DSGQDRIELPLSLEPGLEEGRELILGVRPEQIALG----DGSAAHDLRTEVEVLEPTGP 314
>pir||B82185 glycerol-3-phosphate ABC transporter, ATP-binding protein VC1552
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9656059|gb|AAF94706.1| (AE004233)
glycerol-3-phosphate ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 393
Score = 204 bits (513), Expect = 1e-51
Identities = 125/346 (36%), Positives = 199/346 (57%), Gaps = 14/346 (4%)
Query: 1 MLRVESVSKDYKEFK--LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
ML ++ + K Y ++ + + + E +++GPSG GK+ +L IAG+ G I
Sbjct: 22 MLDIKQLVKTYDNGHQAVKGVDLSIHQGEFIVLVGPSGCGKSSILRSIAGLESITSGEIH 81
Query: 59 LNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
L G V + P R++A + Q+YAL+PHM+VYDN+A+GLK R + +Q I K+ +++K L
Sbjct: 82 LAGRRVDNEKPANRDIAMVFQNYALYPHMSVYDNLAYGLKNRGVDKQTIAAKIAKVAKTL 141
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
IE L RKP LSGG++QRVA+ RA+V +P+L L DEP +NLD ++ E+K ++
Sbjct: 142 KIEEYLDRKPAKLSGGQRQRVAMGRAIVRDPQLFLFDEPLSNLDAALRAHMRLEIKKLQR 201
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NI 236
ELG TS++VTH EA++L DR+ V+ +G + QVG EV+ P VA F+G N
Sbjct: 202 ELGVTSVYVTHDQVEAMTLADRIVVVKQGEIEQVGTPAEVYHQPASTFVASFIGSPAMNF 261
Query: 237 IEGVAKGNILEANGVKITLP----ISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVI 292
+ K L G LP +S E + +G+RPE S P+ + E + ++
Sbjct: 262 LPASIKQGQLHIAGKHCYLPQFDAMSSE-NITLGIRPEH--ASLHPLTNAI--ELKLDIQ 316
Query: 293 GIEELGPLVRVNLKIGGI-TLKAFITRSSLIELGISEGREVYVSFK 337
+E LGP V+ KI G+ + + FI ++ I L + + ++V+ +
Sbjct: 317 VVEPLGPNQLVHGKIIGLESEQDFIAVTAEIPLDVHQTLPIWVALE 362
>gb|AAB95372.1| (U75349) putative ABC transporter BitD [Brachyspira hyodysenteriae]
Length = 374
Score = 203 bits (512), Expect = 2e-51
Identities = 109/286 (38%), Positives = 177/286 (61%), Gaps = 10/286 (3%)
Query: 2 LRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ +E+V K Y++ + D+S ++K E F +LGPSG GKT LL +IAG + G I +
Sbjct: 5 ISIENVVKRYEKLTIIPDLSLEIKNGEFFTLLGPSGCGKTTLLRMIAGFNTIEGGEIKFD 64
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
+ + P KRN+ + Q+YA+FPHMTV +N+ +GLKLR+ +++ + +KV E+ V+ I
Sbjct: 65 KDVINNIPAHKRNIGMVFQNYAIFPHMTVRENVEYGLKLRKENKESMKKKVDEMLHVVKI 124
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E R P LSGG++QRVA+ARA+VI P +LL+DEP +NLD + + + +K ++ +
Sbjct: 125 EEYQDRLPERLSGGQQQRVALARAIVITPSVLLMDEPLSNLDAKLRIEMRSAIKDIQRHV 184
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G T+++VTH EEA+++ DR+ VM G + QVG +++ P + VA F+G N+
Sbjct: 185 GITTVYVTHDQEEALAVSDRIAVMKNGVIQQVGSPVSIYTRPYNVFVATFIGHSNLFYAT 244
Query: 241 AK--GN---ILEANGVKI----TLPISVEGKVRIGVRPEDIILSTE 277
K GN +L G K+ L + +V +G+RPE+ +++E
Sbjct: 245 IKIEGNDTYLLFRCGYKLKMDNLLDVKDGDEVVVGIRPEEFFVNSE 290
>pir||C82310 sulfate ABC transporter, ATP-binding protein VC0541 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9654969|gb|AAF93709.1| (AE004140) sulfate ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 376
Score = 203 bits (511), Expect = 2e-51
Identities = 129/346 (37%), Positives = 195/346 (56%), Gaps = 16/346 (4%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R++++SK + +F+ L +S ++ E +LGPSG+GKT LL IIAG+ D G I
Sbjct: 3 IRLDNISKHFGQFQALAPLSLKIEDGEMIGLLGPSGSGKTTLLRIIAGLEGADSGTIHFR 62
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKL----RRISRQEIDRKVKEISK 116
DVT+ R + ++ Q+YALF HMTV DN+AFGL++ +R + EI ++VK++ +
Sbjct: 63 NRDVTNVHVRDRRVGFVFQNYALFRHMTVADNVAFGLQVMERAQRPNPAEIQKRVKQLLE 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ + HL HR P LSGG+KQR+A+ARAL +PE+LLLDEPF LD + + ++
Sbjct: 123 IVQLGHLAHRYPEQLSGGQKQRIALARALATQPEVLLLDEPFGALDAKVRKELRRWLRSL 182
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
ELGFTS+ VTH +EA+ L DRV VM GR+ Q+ E+++ P V F G N
Sbjct: 183 HDELGFTSVFVTHDQDEALELSDRVVVMSNGRIEQIDSPVELYAQPNSRFVFDFFGNVNQ 242
Query: 237 IEGVAKGNILEANGVKITLPISVEGKVRIG---VRPEDIILSTEPVKTSARNEFRAEVIG 293
G + N NG P + + G VR ++ LS K +++ EV+
Sbjct: 243 FAGEWQ-NGQWVNGSAFIQPPESDATRQSGLLYVRSHELALSD---KENSQASLPFEVVS 298
Query: 294 IEELGPLVRVNLKIGG----ITLKAFITRSSLIELGISEGREVYVS 335
I +G VRV L G +A ++ SL E +S G +V+ +
Sbjct: 299 INPVGAEVRVELASVGWQSQELWEAKLSHRSLSEKRLSRGDQVFAT 344
>pir||G81344 ABC transport system ATP-binding protein Cj0732 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968189|emb|CAB73006.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 329
Score = 202 bits (508), Expect = 6e-51
Identities = 112/313 (35%), Positives = 188/313 (59%), Gaps = 19/313 (6%)
Query: 2 LRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L++++ K Y + DI+F KK E +LGPSG GK+ LL IAG+ + + G+I LN
Sbjct: 4 LKIKNFKKAYGDKIIFEDINFSAKKGEFITLLGPSGCGKSTLLRCIAGLSQINGGKISLN 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
D+T P+KRN+ + Q+YALFP++ V++N+AFGLK++++ +++I+++VK++ K++ +
Sbjct: 64 DKDLTKLSPQKRNIGMVFQNYALFPNLNVFENVAFGLKIKKMDKKDIEKRVKKMLKLVEL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E P LSGG+ QRVA+AR+LVI+P+LLLLDEP + LD + + ++K +KEL
Sbjct: 124 EEYAKTYPHKLSGGQMQRVALARSLVIKPDLLLLDEPLSALDAKIRKYLRVQIKEIQKEL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
T++ VTH EEA+ L D + +M G+++Q + ++ P VA F+G NI+
Sbjct: 184 ELTTIFVTHDQEEALELSDTIILMNEGKIIQNSNANNLYLLPESHFVASFIGNYNIL--- 240
Query: 241 AKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
L++ G+K + K I +RPE I +S E ++ + + LG +
Sbjct: 241 -SPKELDSLGLK------HDFKKDIALRPETIEISNEGLEAKIKEK--------SLLGNI 285
Query: 301 VRVNLKIGGITLK 313
+R +++ I K
Sbjct: 286 IRYRVRVQEIEFK 298
>gb|AAC12799.1| (U67851) ChtG [Agrobacterium sp.] >gi|3153868|gb|AAC17431.1|
(AF065242) putative ABC type transporter ChtG
[Agrobacterium tumefaciens]
Length = 324
Score = 201 bits (507), Expect = 7e-51
Identities = 115/319 (36%), Positives = 185/319 (57%), Gaps = 4/319 (1%)
Query: 29 FIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYIPQDYALFPHMT 88
F +LG SG+GKT LL ++AG +P EG+++++G VT PP +R++ + Q+YALFPHMT
Sbjct: 1 FALLGSSGSGKTTLLMLLAGFDQPSEGKVLMSGTSVTEVPPHRRSIGVVFQNYALFPHMT 60
Query: 89 VYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIE 148
+N+A+ LK+R + R E D +VK ++ + P +SGG++QRVA+AR+LV
Sbjct: 61 AAENVAYPLKMRGVGRSERDERVKAALSLVNLTDRGASYPIQMSGGQQQRVALARSLVFG 120
Query: 149 PELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGR 208
P++LL+DEP LD + + + E+K + ELG T ++VTH EA+++ DR+G+M G
Sbjct: 121 PDILLMDEPLGALDRRLRDQMQHELKRIQHELGITVIYVTHDQSEAMAMADRIGIMSGGE 180
Query: 209 LVQVGDVKEVFSNPVDEGVARFLGFENI--IEGVAKGNILEANGVKITLPISVEGKVRIG 266
L+QV D + +++ P + VARF+G +I + + +G E G + LP + I
Sbjct: 181 LLQVADPETIYAAPSNHFVARFIGDCSILRVTNLDEGRGYEIAGGRQLLPSPAKTPFDIV 240
Query: 267 VRPEDI-ILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIG-GITLKAFITRSSLIEL 324
VRPE + I S + A + I LG RV L+I G +L A + R L+
Sbjct: 241 VRPESVSIRSVAEANSDEGFAVPATIRDITYLGSGWRVALQISDGQSLLANVMRGDLLAG 300
Query: 325 GISEGREVYVSFKTSAIKV 343
+ G+ V + +++ V
Sbjct: 301 SLEPGKSVIARWAPASVAV 319
>gb|AAC04471.1| (AF007800) MtlK [Pseudomonas fluorescens]
Length = 367
Score = 201 bits (506), Expect = 1e-50
Identities = 112/291 (38%), Positives = 175/291 (59%), Gaps = 18/291 (6%)
Query: 2 LRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L+++++ K ++ F + + I +V +E + +GPSG GK+ LL +IAG+ E EG I L+
Sbjct: 4 LKIKNLQKGFEGFSIIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLEEVSEGTIELD 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D+T P KR+LA + Q YAL+PHM+V N++F L L + +Q ++ KV E +++L +
Sbjct: 64 GRDITEVTPAKRDLAMVFQTYALYPHMSVRKNMSFALDLAGVDKQLVESKVNEAARILEL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
LL RKP+ LSGG++QRVAI RA+V P++ L DEP +NLD + + E+ KEL
Sbjct: 124 GPLLERKPKQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARLHKEL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
T ++VTH EA++L D+V V+ GR+ QVG E++ P + VA FLG + G
Sbjct: 184 QATMIYVTHDQVEAMTLADKVVVLNSGRIEQVGSPLELYHQPANLFVAGFLGTPKM--GF 241
Query: 241 AKGNILEAN----------GVKITLP-----ISVEGKVRIGVRPEDIILST 276
KG + + G I+LP +SV V +G+RPE + +++
Sbjct: 242 LKGKVTRVDGQGCEVQLDAGTLISLPLSGASLSVGSAVTLGIRPEHLEIAS 292
>pir||A82429 iron(III) ABC transporter, ATP-binding protein VCA0687 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658105|gb|AAF96587.1| (AE004398) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 351
Score = 201 bits (506), Expect = 1e-50
Identities = 101/281 (35%), Positives = 173/281 (60%), Gaps = 5/281 (1%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
++ ++KK +LGPSG GKT +L ++AG+ +P G+I ++G DVT ++R++ +
Sbjct: 24 NLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGEDVTERSIQQRDICMV 83
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
Q YALFPHM++Y+N+A+GLK+ ++ +E+ ++V E K++ +E + R +SGG++Q
Sbjct: 84 FQSYALFPHMSLYENVAYGLKMLKLPSEEVRQRVDEALKIVDLEGMGERYVDQISGGQQQ 143
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ARALV++P++LL DEP +NLD + ++ ++ TSL+VTH EA ++
Sbjct: 144 RVALARALVLKPKVLLFDEPLSNLDANLRRSMRETIRELQQRFDITSLYVTHDQAEAFAV 203
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITLPI 257
D V VM +G ++Q+G +E++ P +A F+G N+ +G G + NG I +
Sbjct: 204 SDTVIVMKQGDIMQIGTPQELYKAPKSMFMANFMGEANMFQGHFDGQQIHINGYAIDADL 263
Query: 258 SV-----EGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIG 293
V G+ +IGVRPE I L T+ ++ A ++ +G
Sbjct: 264 EVTRDKPNGEYQIGVRPEAITLHTQGSESQACQILKSAYMG 304
>gb|AAK43169.1| Arabinose ABC transporter, ATP-binding protein [Sulfolobus
solfataricus]
Length = 371
Score = 201 bits (506), Expect = 1e-50
Identities = 112/288 (38%), Positives = 181/288 (61%), Gaps = 15/288 (5%)
Query: 2 LRVESVSKDYKEFKLR-----DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGR 56
+RVE++SK +K+ K ++S + F +LGPSG GKT L +IAG+ EP G
Sbjct: 4 IRVENLSKIFKKGKTEVKAVDNVSITIDSGMAFGVLGPSGHGKTTFLRLIAGLEEPTSGY 63
Query: 57 IILNGVDVTS-----YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKV 111
I + V+S PEKR +A + Q++AL+P+MTV+DNIAF LKL ++ + +I+ KV
Sbjct: 64 IYFDNEAVSSPRRVMMSPEKRGIAMVFQNWALYPNMTVFDNIAFPLKLAKVPKDKIENKV 123
Query: 112 KEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMT 171
KE+S+ LG+ +L+R P+ LSGG+ QR AIARALV +P++LLLDEPF+NLD Q +
Sbjct: 124 KEVSEELGLSGVLNRYPKELSGGQMQRTAIARALVKDPKVLLLDEPFSNLDAQIRESARA 183
Query: 172 EMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
++ ++E T+L V+H + ++ ++ GV++ G+ Q+G E++ P + +AR
Sbjct: 184 LVRKIQRERKLTTLIVSHDPADIFAIANKAGVIVNGKFAQIGTPTEIYEYPATDLIARLT 243
Query: 232 GFENIIEG-VAKGNILEANGVKITL---PISVEGKVRIGVRPEDIILS 275
G N+I+ + + N + AN +K+ L + + + IG+RP+D+ LS
Sbjct: 244 GEINLIQAKIIENNAIIAN-LKVPLNNMELKGQSNIVIGLRPDDLTLS 290
>sp|P74548|CYSA_SYNY3 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7442560|pir||S76743
hypothetical transport protein - Synechocystis sp.
(strain PCC 6803) >gi|1653744|dbj|BAA18655.1| (D90916)
sulfate transport system permease protein [Synechocystis
sp.]
Length = 355
Score = 201 bits (506), Expect = 1e-50
Identities = 120/345 (34%), Positives = 195/345 (55%), Gaps = 15/345 (4%)
Query: 4 VESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+ +VSK + +F L+DI+ +V + +LGPSG+GK+ LL IAG+ EPD+G+II+NG
Sbjct: 5 INNVSKQFGDFTALKDINLEVPDGKLVALLGPSGSGKSTLLRAIAGLEEPDQGQIIINGQ 64
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
D T KRN+ ++ Q YALF H+T+ NIAFGL++R+ + +V+E+ ++ +E
Sbjct: 65 DATHVDIRKRNIGFVFQHYALFKHLTIRQNIAFGLEIRKHPPAKTKERVEELLSLIQLEG 124
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
L +R P LSGG++QRVA+ARAL ++P++LLLDEPF LD + + ++ E+
Sbjct: 125 LGNRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKELRAWLRKLHDEVHL 184
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAK 242
TS+ VTH EEA+ + D + VM G++ QVG +E++ +P V F+G N++
Sbjct: 185 TSVFVTHDQEEAMEVADEIVVMSNGKIEQVGTAEEIYEHPASPFVMGFIGEVNVLP--RN 242
Query: 243 GNILEANGVKITLPISVEG--KVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
++ + + P S + + VRP D L TE S + + LG
Sbjct: 243 ASLFNYHAFE---PHSSNNGHQEPVFVRPHDFELLTEADDASVAGTIKRVI----HLGSE 295
Query: 301 VRVN-LKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
++V L + + A++ R +L G++V++ K KVF
Sbjct: 296 IQVEVLLMDNTAVLAYLNREQGQQLNPKAGKKVFI--KPRVAKVF 338
>sp|P14788|CYSA_SYNP7 SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|72468|pir||GRYCS7
sulfate transport protein - Synechococcus sp. (strain
PCC 7942) >gi|142152|gb|AAA22056.1| (J04512) sulfate
permease (gtg start codon) [Synechococcus PCC6301]
Length = 344
Score = 201 bits (505), Expect = 1e-50
Identities = 114/335 (34%), Positives = 195/335 (58%), Gaps = 15/335 (4%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
++V VSK + F+ ++D+ V+ +LGPSG+GK+ LL +IAG+ +PD GRI L
Sbjct: 9 IQVSQVSKQFGSFQAVKDVDLTVETGSLVALLGPSGSGKSTLLRLIAGLEQPDSGRIFLT 68
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D T+ R + ++ Q YALF H+TV NIAFGL+LR+ +++++ +V+E+ +++ +
Sbjct: 69 GRDATNESVRDRQIGFVFQHYALFKHLTVRKNIAFGLELRKHTKEKVRARVEELLELVQL 128
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
L R P LSGG++QRVA+ARAL ++P++LLLDEPF LD + + + ++ E+
Sbjct: 129 TGLGDRYPSQLSGGQRQRVALARALAVQPQVLLLDEPFGALDAKVRKDLRSWLRKLHDEV 188
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
T++ VTH EEA+ + D++ VM G++ Q+G E++ NP V F+G N++
Sbjct: 189 HVTTVFVTHDQEEAMEVADQIVVMNHGKVEQIGSPAEIYDNPATPFVMSFIGPVNVLPN- 247
Query: 241 AKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
+I +A G+ P + +RP DI ++ +P+ + A + I LG
Sbjct: 248 -SSHIFQAGGLDTPHP-------EVFLRPHDIEIAIDPIPETV----PARIDRIVHLGWE 295
Query: 301 VRVNLKI-GGITLKAFITRSSLIELGISEGREVYV 334
V+ +++ G L A + R +L + ++V+V
Sbjct: 296 VQAEVRLEDGQVLVAHLPRDRYRDLQLEPEQQVFV 330
>pir||A70180 spermidine/putrescine ABC transporter, ATP-binding protein (potA)
homolog - Lyme disease spirochete
>gi|2688562|gb|AAB91525.1| (AE001165)
spermidine/putrescine ABC transporter, ATP-binding
protein (potA) [Borrelia burgdorferi]
Length = 347
Score = 201 bits (505), Expect = 1e-50
Identities = 103/263 (39%), Positives = 162/263 (61%), Gaps = 4/263 (1%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
L +I+ +KK E +LGPSG GKT L++I+ G + G I +++ P KR +
Sbjct: 23 LDNINLKIKKNEFITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFSKEISKTSPNKREIN 82
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q+YALFPHM V+DNI+FGL++++ + I KVK ++G+ +R LSGG+
Sbjct: 83 TVFQNYALFPHMNVFDNISFGLRMKKTPKDIIKEKVKTSLSLIGMPKYAYRNINELSGGQ 142
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
KQRVAIARA+V+EP+LLLLDEP + LD++ + E+K +++LG T ++VTH EEA+
Sbjct: 143 KQRVAIARAMVMEPKLLLLDEPLSALDLKMRQEMQKELKKIQRQLGITFIYVTHDQEEAL 202
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKG----NILEANGV 251
++ DR+ VM G ++Q+G +E+++ P + VA F+G NI +G K ++L
Sbjct: 203 TMSDRIVVMNEGIILQIGTPEEIYNEPKTKFVADFIGESNIFDGTYKKELVVSLLGHEFE 262
Query: 252 KITLPISVEGKVRIGVRPEDIIL 274
+ E V + +RPED+ L
Sbjct: 263 CLDKGFEAEEAVDLVIRPEDVKL 285
>gb|AAG20921.1| (AE005158) sn-glycerol-3-phosphate transport system ATP-binding;
UgpC [Halobacterium sp. NRC-1]
Length = 379
Score = 201 bits (505), Expect = 1e-50
Identities = 119/321 (37%), Positives = 180/321 (56%), Gaps = 15/321 (4%)
Query: 2 LRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ + ++K Y D I DV EE +++GPSG GK+ L +IAG+ + G I +
Sbjct: 4 ITLTDLTKHYDSIAAVDGIDLDVLDEEFLVVVGPSGCGKSTTLRLIAGLEDATAGTIRIG 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLK-LRRISRQEIDRKVKEISKVLG 119
G DVT PPE R++A + Q+YAL+PHMT +N+ FG++ + S EI+ +V + + LG
Sbjct: 64 GTDVTDSPPEDRDIAMVFQNYALYPHMTAAENMTFGMQSVTDYSSAEIEDRVADAAATLG 123
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
I LL R P LSGGE+QRVAI RALV EP + LLDEP +NLD + + E+ +E
Sbjct: 124 ITELLDRTPDALSGGERQRVAIGRALVREPSVFLLDEPLSNLDAKLRVHMRAELSKLHRE 183
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI--- 236
L T+++VTH EA++LGDRV V+ G + QV ++++ P ++ VA F+G +
Sbjct: 184 LDTTTVYVTHDQTEAMTLGDRVAVLNDGTVQQVAPPQQLYDFPANQFVAGFIGEPAMNLV 243
Query: 237 ---IEGVAKGNILEANGVKITLP------ISVEGKVRIGVRPEDIILSTEPVKTSARNEF 287
+ +G + + G LP V+ ++ GVRPED++L+ T F
Sbjct: 244 PVRVRDRPRGLVADHEGFAHPLPDGGSNSALVDRRLTFGVRPEDVLLAGRSA-TGHEESF 302
Query: 288 RAEVIGIEELGPLVRVNLKIG 308
A V E LG + ++ IG
Sbjct: 303 EARVTVREPLGEQLLLHCTIG 323
>pir||E71296 probable spermidine/putrescine ABC transporter, ATP-binding protein
(potA) - syphilis spirochete >gi|3322953|gb|AAC65627.1|
(AE001240) spermidine/putrescine ABC transporter,
ATP-binding protein (potA) [Treponema pallidum]
Length = 379
Score = 200 bits (504), Expect = 2e-50
Identities = 121/307 (39%), Positives = 174/307 (56%), Gaps = 19/307 (6%)
Query: 4 VESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
++ VSK Y D + +++ E F ILGPSG GKT LL IIAG +PD G + + V
Sbjct: 12 IDQVSKAYGHCLAVDRATVHIRQGEFFSILGPSGCGKTTLLRIIAGFEQPDSGDLTFDHV 71
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
V KR + Q YALFPH++VY+NIAF L+L+R+S+ I +V E ++ ++
Sbjct: 72 SVLGVGANKRRSNTVFQSYALFPHLSVYENIAFPLRLKRLSKNLIRERVHEYLHLVQLDE 131
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
LH+KP LSGG++QRVAIARALV EP +LLLDEP + LD + +S + E+ + G
Sbjct: 132 HLHKKPHQLSGGQQQRVAIARALVCEPGVLLLDEPLSALDAKLRSNLLIELDTLHDQTGI 191
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN-IIEGVA 241
T + +TH EA+S+ DR+ VM +G+++Q+G E++ P + VA+F+G N + V
Sbjct: 192 TFVFITHDQSEALSVSDRIAVMNKGKILQIGTPYEIYEQPATDFVAKFIGETNSFLSTVV 251
Query: 242 KGNILEANGVKITL---------------PISVEGKVRIGVRPEDIILS-TEPVKTSA-R 284
+E ++L PI +V VRPE I +S EP TSA
Sbjct: 252 SCTAIENEEFMLSLQVPELDRTLTVTADNPIDPGRRVCFTVRPEKIHISLEEPGTTSAPL 311
Query: 285 NEFRAEV 291
N FR V
Sbjct: 312 NVFRGFV 318
>pir||H70682 probable cysA - Mycobacterium tuberculosis (strain H37RV)
>gi|1655663|emb|CAB03729.1| (Z81368) cysA [Mycobacterium
tuberculosis]
Length = 351
Score = 200 bits (503), Expect = 2e-50
Identities = 123/334 (36%), Positives = 179/334 (52%), Gaps = 20/334 (5%)
Query: 4 VESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
V +K Y +F D + F V +LGPSG+GK+ LL IAG+ +PD G I +NG
Sbjct: 7 VADATKRYGDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTGTITINGR 66
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
DVT PP++R + ++ Q YA F H+TV DN+AFGLK+R+ + EI KV + +V+G+
Sbjct: 67 DVTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAFGLKIRKRPKAEIKAKVDNLLQVVGLSG 126
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
R P LSGG++QR+A+ARAL ++PE+LLLDEPF LD + + ++ E+
Sbjct: 127 FQSRYPNQLSGGQRQRMALARALAVDPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHV 186
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAK 242
T++ VTH EA+ + DR+ V+ +GR+ QVG +V+ P + V FLG + + G
Sbjct: 187 TTVLVTHDQAEALDVADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLGAVSTLNG--- 243
Query: 243 GNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVR 302
+ P +R+G P + + + S RA V + LG VR
Sbjct: 244 ---------SLVRP----HDIRVGRTPNMAVAAADGTAGST-GVLRAVVDRVVVLGFEVR 289
Query: 303 VNLKIG--GITLKAFITRSSLIELGISEGREVYV 334
V L G A ITR L + EG VYV
Sbjct: 290 VELTSAATGGAFTAQITRGDAEALALREGDTVYV 323
>gb|AAF22612.1|AF161268_1 (AF161268) ATP binding protein MalK [Thermoanaerobacter
ethanolicus]
Length = 371
Score = 199 bits (502), Expect = 3e-50
Identities = 125/360 (34%), Positives = 198/360 (54%), Gaps = 24/360 (6%)
Query: 5 ESVSKDY------KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
E V+K++ K + D +F ++ +E +++GPSG GKT L +IAG+ +G I
Sbjct: 7 EHVTKEFIDEKRGKVIAVNDANFTIEDKEFVVLVGPSGCGKTTTLRMIAGLERQTKGNIY 66
Query: 59 LNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
+ V PP+ R++A + QDYAL+PHMTVY+N++FGL+ ++ R EI++KVK +++L
Sbjct: 67 IGEKLVNYLPPKDRDIAMVFQDYALYPHMTVYENLSFGLRNLKVPRTEIEQKVKRAAEIL 126
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
GI LL RKPR LSGG++QRVA+ RA+V P++ L DEP +NLD + + + E+ K
Sbjct: 127 GISELLDRKPRELSGGQRQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRVELAELHK 186
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NI 236
+L T ++VTH EA++LG R+ VM G + Q+ E+++ PV+ VA F+G N
Sbjct: 187 KLETTIVYVTHDQVEAMTLGQRIIVMNLGIIQQIATPDELYNRPVNMFVAGFIGAPSMNF 246
Query: 237 IE-GVAKGNILEANGVKITL----------PISVEGKVRI-GVRPEDIILSTEPVKTSAR 284
I V + I+ ++G T+ ++ GK + G+RPEDI + +
Sbjct: 247 INCKVERNKIILSDGNSNTMFDIPQKFKKVIANINGKEMVMGIRPEDIYDAVFSQNIENK 306
Query: 285 NEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
V +E+LG + G T+ A + S I G V+F I +F
Sbjct: 307 LHVDVYVKVVEKLGSENLIYFDKYGTTITARVNSQS----RIVSGEYAKVAFNIDKIYLF 362
>pir||B83571 probable ATP-binding component of ABC transporter PA0603 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946476|gb|AAG03992.1|AE004496_8 (AE004496) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 369
Score = 199 bits (501), Expect = 4e-50
Identities = 113/315 (35%), Positives = 176/315 (55%), Gaps = 18/315 (5%)
Query: 8 SKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSY 67
S D + ++D++ D++K E +LGPSG+GKT L ++AG P G I+L G + +
Sbjct: 19 SYDGETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLAGRSINNV 78
Query: 68 PPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRK 127
PP KR++ + Q+YALFPHMTV +N+AF L +R +S+ ++ +VK ++ ++ R
Sbjct: 79 PPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVKERVKRALSMVQLDAFAGRY 138
Query: 128 PRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHV 187
P LSGG++QRVA+ARALV EP+L+L+DEP LD Q + E+K + LG T ++V
Sbjct: 139 PAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYV 198
Query: 188 THSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN------------ 235
TH EA+++ DRV V +G + Q+ + ++ P + VA F+G N
Sbjct: 199 THDQGEALTMSDRVAVFHQGEIQQIEPPRNLYEQPRNTFVANFIGENNRLSGQLLSCDGE 258
Query: 236 -IIEGVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGI 294
+ G+ +G +EA V + P V + +RPE + L+ S N F V
Sbjct: 259 RCVVGLPRGEKVEALAVNVGQP---GEPVTLSIRPERVRLN--GASESCVNRFSGRVAEF 313
Query: 295 EELGPLVRVNLKIGG 309
LG VRV L++ G
Sbjct: 314 VYLGDHVRVRLEVCG 328
>pir||T34595 ABC-transporter ATP-binding protein - Streptomyces coelicolor
>gi|2815336|emb|CAA16460.1| (AL021529) SC10A5.28c,
ABC-transporter ATP-binding protein, len : 361 aa;
similar to many eg. Streptomyces reticuli TR:P964 83
(EMBL:Y08921) MSIK PROTEIN involved in in cellobiose and
maltose transport(377 aa), opt: 809 z-score: 1069.1 E():
0 , 40.4% i>
Length = 361
Score = 199 bits (500), Expect = 5e-50
Identities = 117/331 (35%), Positives = 180/331 (54%), Gaps = 18/331 (5%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG----- 55
L VE++ K + L D++F V E F +LGPSG GK+ L +AG+ PD G
Sbjct: 4 LVVENIKKSFHGTAVLEDVNFTVADGEFFTLLGPSGCGKSTTLSCVAGLETPDSGTIRVG 63
Query: 56 -RIILNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEI 114
++ +G ++ PPE RNL + Q YAL+PHMTV DN+A LKLR++++ E R + ++
Sbjct: 64 DQVFFDGTRRSTVPPEGRNLGLVFQSYALWPHMTVADNLALPLKLRKVTKGEQRRLIDDV 123
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ + HL R P LSGG++QRVA+AR +V P +LLLDEP +NLD + + + +K
Sbjct: 124 LTKVDMAHLRDRYPHQLSGGQQQRVALARGIVYSPGVLLLDEPLSNLDAKMRDQARVWLK 183
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE 234
++E+G T+++VTH EA+SL DR+ V + G L QVG E++ P VA F+G
Sbjct: 184 DLQREVGITTVYVTHDQVEAMSLSDRIAVFMHGHLQQVGTPTEIYETPATPEVAGFIGRC 243
Query: 235 NIIE---GVAKGNILE------ANGVKITLPISVEGKVRIGVRPEDIILS--TEPVKTSA 283
N++E G +G ++ +++ S +G+R E I L+ + A
Sbjct: 244 NLLEGRVGATEGGAVQVELGETGQRLRVAGACSAGSSATVGLRSERITLTDRADAPHDGA 303
Query: 284 RNEFRAEVIGIEELGPLVRVNLKIGGITLKA 314
N RA + G L IG + + A
Sbjct: 304 VNVLRARIEQCSYTGARFEYELSIGDVRVHA 334
>pir||G83605 probable ATP-binding component of ABC transporter PA0326 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946173|gb|AAG03715.1|AE004470_9 (AE004470) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 349
Score = 199 bits (500), Expect = 5e-50
Identities = 103/263 (39%), Positives = 159/263 (60%), Gaps = 1/263 (0%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
L D+S D+ E F +LGPSG GKT LL +IAG +P G I L G + PP +R +
Sbjct: 24 LDDVSLDIHANEFFTLLGPSGCGKTTLLRLIAGFEQPSSGSIRLYGEHMEGLPPFRRPVN 83
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q YALFPHM+V DNI FGL+++ R EID V + ++ + + R+ LSGG+
Sbjct: 84 TVFQSYALFPHMSVADNIGFGLEMQGRPRSEIDATVSRMLDLVKLPEVGKRRADQLSGGQ 143
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QR+A+ARAL P++LLLDE + LD++ + E+K + E G T + VTH EEA+
Sbjct: 144 QQRIALARALASRPKVLLLDESLSALDLKLRKEMQIELKRLQHETGITFIFVTHDQEEAL 203
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGN-ILEANGVKIT 254
++ DR+ VM +G+++QVG +++ P++ VA F+G N +EG A + + A+G ++
Sbjct: 204 TMSDRIAVMSKGKVLQVGTPSDIYEAPLNRAVADFIGETNFLEGQADADGVRLADGQRLA 263
Query: 255 LPISVEGKVRIGVRPEDIILSTE 277
G V + +RPE L+ +
Sbjct: 264 ATTPGSGAVTLAIRPERTELAAD 286
>pir||T46950 probable ATPase component of 2-aminoethylphosphonate transporter
phnT [imported] - Salmonella typhimurium
>gi|1763082|gb|AAB39645.1| (U69493) PhnT [Salmonella
typhimurium]
Length = 369
Score = 198 bits (499), Expect = 6e-50
Identities = 112/317 (35%), Positives = 181/317 (56%), Gaps = 22/317 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
L+ +S ++ E ++GPSG+GKT +L +AG ++P GRI++ DVT PP KR LA
Sbjct: 34 LKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRILIGDTDVTHLPPYKRGLA 93
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q+YALFPH+ V DN+AFGL+ ++ + I+ +V + K +G+ R P LSGG+
Sbjct: 94 MVVQNYALFPHLKVEDNVAFGLRAQKQPKALINERVTQALKTVGMSDYAARYPHQLSGGQ 153
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL-GFTSLHVTHSFEEA 194
+QRVAIARA+ + P +LLLDEP + LD Q + + E+ +EL T L+VTH EA
Sbjct: 154 QQRVAIARAIAVRPRVLLLDEPLSALDAQIRHNMVEEIARLHRELPELTILYVTHDQTEA 213
Query: 195 ISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKIT 254
++L D++G+M G L+ G+ + ++ +P + A FLG NI+ +A G I EA G+
Sbjct: 214 LTLADKIGIMKDGSLIAHGETRALYQHPPNRFAAEFLGRANILSAIALG-ITEAPGL--- 269
Query: 255 LPISVEGKV--------------RIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
+ +S G V + +RP+ + L+ +++ N F A + + G L
Sbjct: 270 VDVSCGGAVIRAFSRGSHHGYNKLLCIRPQHLSLTP---RSAYSNRFNATLQSVHWQGDL 326
Query: 301 VRVNLKIGGITLKAFIT 317
+ + G T++ +T
Sbjct: 327 THLLCDVAGETVRMVLT 343
>gb|AAG20488.1| (AE005121) sulfate transport system ATP-binding protein; CysA
[Halobacterium sp. NRC-1]
Length = 343
Score = 198 bits (498), Expect = 8e-50
Identities = 110/282 (39%), Positives = 160/282 (56%), Gaps = 9/282 (3%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
D+S + E F ++GPSG GKT L +IAG PD G I+ V+ PPE R++ +
Sbjct: 22 DVSVSIADGEFFTLVGPSGCGKTTTLRLIAGFETPDRGEIVFGDRSVSGVPPEDRDVGIV 81
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRI-SRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEK 136
Q YALFPHMTV +N+A+GL+ R + +V E+ ++ + R+P LSGG++
Sbjct: 82 FQSYALFPHMTVRENVAYGLRFREPPGGASTEERVSELLSLVDLAGTGDREPAALSGGQQ 141
Query: 137 QRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAIS 196
QRVA+ARAL P +LLLDEP + LD + + R +K ++EL T+++VTH EA+S
Sbjct: 142 QRVALARALAPGPSVLLLDEPMSALDARLRDRLRGTIKEIQRELDITTVYVTHDQAEALS 201
Query: 197 LGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVA-----KGNILEANGV 251
+ DRV VM G +VQVG + V+ P VA F+G N++ G A G+ + NGV
Sbjct: 202 ISDRVAVMRDGAVVQVGTPEAVYREPSSRFVAEFVGENNVVSGTAVPLETGGSSVSVNGV 261
Query: 252 KITLPISVEGKVRIGVRPEDIILSTEPV---KTSARNEFRAE 290
+ V G V +G+RPE + + V T R FR +
Sbjct: 262 TFEVSECVTGDVAVGLRPEALSFGSGGVGFDVTVERTAFRGD 303
>sp|P54933|SMOK_RHOSH ATP-BINDING TRANSPORT PROTEIN SMOK (POLK)
>gi|2338762|gb|AAC45769.1| (AF018073) sorbitol/mannitol
transport ATP-binding transport protein; SmoK
[Rhodobacter sphaeroides]
Length = 332
Score = 197 bits (495), Expect = 2e-49
Identities = 120/346 (34%), Positives = 185/346 (52%), Gaps = 27/346 (7%)
Query: 2 LRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ + +V K + E + + D++ E + +GPSG GK+ LL +IAG+ + +G+I+++
Sbjct: 4 ITLRNVQKRFGEAVVIPSLDLDIEDGEFVVFVGPSGCGKSTLLRLIAGLEDVSDGQIMID 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D T PP KR LA + Q YAL+PHMTV NIAF L++ ++ QEI+R+V +K+L +
Sbjct: 64 GRDATEMPPAKRGLAMVFQSYALYPHMTVKKNIAFPLRMAKMEPQEIERRVSNAAKILNL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+ L R+P LSGG++QRVAI RA+V EP L DEP +NLD + E+ + L
Sbjct: 124 TNYLDRRPGQLSGGQRQRVAIGRAIVREPAAFLFDEPLSNLDAALRVNMRLEITELHQSL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
T ++VTH EA+++ D++ V+ GR+ QVG ++ NP + VA F+G N+IE
Sbjct: 184 ETTMIYVTHDQVEAMTMADKIVVLNAGRIEQVGSPLTLYRNPANLFVAGFIGSPKMNLIE 243
Query: 239 GVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELG 298
G G IG+RPE I LS E + EV E LG
Sbjct: 244 GPEAAK---------------HGATTIGIRPEHIDLSRE------AGAWEGEVGVSEHLG 282
Query: 299 PLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
+++ + G+ T E G+ G V+++ + I F
Sbjct: 283 SDTFLHVHVAGMPTLTVRTGG---EFGVHHGDRVWLTPQADKIHRF 325
>pir||G83607 polyamine transport protein PotG PA0302 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9946147|gb|AAG03691.1|AE004468_3 (AE004468)
polyamine transport protein PotG [Pseudomonas
aeruginosa]
Length = 384
Score = 197 bits (495), Expect = 2e-49
Identities = 118/353 (33%), Positives = 197/353 (55%), Gaps = 17/353 (4%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+++++ V+K + E D +S + K E F +LG SG+GK+ LL ++AG P EGRI L
Sbjct: 22 LVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFL 81
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+G D+T PP +R + + Q YALFPHM+V NIAFGLK + + EID +V E+ K++
Sbjct: 82 DGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVH 141
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
+ RKP LSGG++QRVA+AR+L P+LLLLDEP LD + +S+ E+ +
Sbjct: 142 MTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIER 201
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG 239
+G T + VTH EEA+++ R+ +M G + Q+G +++ P V F+G N+ +G
Sbjct: 202 VGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDG 261
Query: 240 VAKGNILE---------ANGVKITLPISV---EGKVRIGVRPEDIILSTEP---VKTSAR 284
V ++ + N + I IS + ++ +RPE +++S + ++ +
Sbjct: 262 VLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGH 321
Query: 285 NEFRAEVIGIEELGPLVRVNLKI-GGITLKAFITRSSLIELGISEGREVYVSF 336
N + V I LG +K+ G+ ++AF+ + + + VY+S+
Sbjct: 322 NWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISW 374
>sp|P77481|YCJV_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YCJV
>gi|7442507|pir||A64881 probable ABC-type transport
protein b1318 - Escherichia coli
>gi|1742155|dbj|BAA14893.1| (D90769) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1742163|dbj|BAA14900.1| (D90770) Nucleotide-binding
protein UgpC [Escherichia coli]
>gi|1787577|gb|AAC74400.1| (AE000229) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 322
Score = 196 bits (494), Expect = 2e-49
Identities = 103/292 (35%), Positives = 173/292 (58%), Gaps = 12/292 (4%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
++D + ++ +E + +GPSG GK+ L +IAG+ E G ++++G + P + RN+A
Sbjct: 20 VKDFNLEIADKEFIVFVGPSGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIA 79
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q+YAL+PHMTVYDN+AFGLK+++I+++ ID +V +++LG+ L RKP LSGG+
Sbjct: 80 MVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQ 139
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ RA+V E + L+DEP +NLD + + + E+ ++L T ++VTH EA+
Sbjct: 140 RQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAM 199
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEGVAKGNILEANGVKI 253
++ R+ +M G + QVG K V++ P + V+ F+G N I G G+ +K+
Sbjct: 200 TMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAMNFIRGTIDGDKFVTETLKL 259
Query: 254 TLP----------ISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIE 295
T+P S+ + +G+RPEDI + + AE+ G E
Sbjct: 260 TIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDAQEENNISAKISVAELTGAE 311
>pir||C83353 probable ATP-binding component of ABC maltose/mannitol transporter
PA2341 [imported] - Pseudomonas aeruginosa (strain
PAO1) >gi|9948377|gb|AAG05729.1|AE004660_5 (AE004660)
probable ATP-binding component of ABC maltose/mannitol
transporter [Pseudomonas aeruginosa]
Length = 370
Score = 196 bits (493), Expect = 3e-49
Identities = 110/288 (38%), Positives = 172/288 (59%), Gaps = 20/288 (6%)
Query: 2 LRVESVSKDYK-EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L++ ++ K + + ++ I DV+ E + +GPSG GK+ LL +IAG+ E G I L+
Sbjct: 4 LKIRNLQKGFDGQAIIKGIDLDVRDREFVVFVGPSGCGKSTLLRLIAGLEEASGGSIALD 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D+T PP KR+LA + Q YAL+PHMTV N++F L L + ++E+ KV +++L +
Sbjct: 64 GTDITDTPPAKRDLAMVFQTYALYPHMTVRRNLSFALDLAGVDKREVAAKVDAAARILEL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+ LL RKPR LSGG++QRVAI RA+V P++ L DEP +NLD + + E+ +EL
Sbjct: 124 QALLERKPRQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLDAALRVQMRLELARLHQEL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
T ++VTH EA++L D+V V+ GR+ QVG E++ +P + VA FLG + G
Sbjct: 184 AATMIYVTHDQVEAMTLADKVVVLNGGRVEQVGSPLELYHHPANLFVAGFLGTPKM--GF 241
Query: 241 AKGNI-----------LEANGVKITLP-----ISVEGKVRIGVRPEDI 272
+G++ LE G ++ LP ++ V +G+RPE +
Sbjct: 242 LRGHLSRNQGERCEVALEC-GARVGLPLCAGELATGSPVTLGIRPEHL 288
>pir||F81875 sulfate ABC transporter, ATP-binding protein NMA1097 [similarity] -
Neisseria meningitidis (group A strain Z2491)
>gi|7379792|emb|CAB84360.1| (AL162755) putative sulphate
permease ATP-binding protein [Neisseria meningitidis
Z2491]
Length = 357
Score = 196 bits (492), Expect = 4e-49
Identities = 116/339 (34%), Positives = 186/339 (54%), Gaps = 12/339 (3%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ +++++K + F L++I+ +V + +LGPSG GKT LL IIAG+ D G+I+ +
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGKILFD 62
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGL----KLRRISRQEIDRKVKEISK 116
G DVT+ +R + ++ Q YALF HM V+DN+AFGL K R S+ +I KV+E+ K
Sbjct: 63 GQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKGQIRAKVEELLK 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ + HL P LSGG++QR+A+ARAL +EP+LLLLDEPF LD + + T ++
Sbjct: 123 LVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLRDI 182
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
LG TS+ VTH EEA+ + D + VM G++ Q G + ++ P + V FLG +
Sbjct: 183 HHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGETDA 242
Query: 237 IEGVAKGNILEANGVKITLPISVEGKVRIG---VRPEDIILSTEPVKTSARNEFRAEVIG 293
EG + NG L + + + +RP + ++ E AE+
Sbjct: 243 FEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYIRPHEWQIAAE----HETPMICAEIEK 298
Query: 294 IEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREV 332
+ +G L + +K G + + S I+EG+E+
Sbjct: 299 VHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEGKEL 337
>sp|P10907|UGPC_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT ATP-BINDING PROTEIN UGPC
>gi|43249|emb|CAA31534.1| (X13141) ugpC protein (AA
1-356) [Escherichia coli]
Length = 356
Score = 195 bits (491), Expect = 6e-49
Identities = 112/288 (38%), Positives = 179/288 (61%), Gaps = 13/288 (4%)
Query: 2 LRVESVSK--DYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
L++++V+K D K ++ ++ DV E +++GPSG GK+ LL ++AG+ EG I +
Sbjct: 4 LKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGDIWI 63
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
N VT P+ R +A + Q+YAL+PHM+V +N+A+GLK+R + +Q+I +VKE +++L
Sbjct: 64 NDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILE 123
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
++ LL R+PR LSGG++QRVA+ RA+V +P + L DEP +NLD + + + E++ +
Sbjct: 124 LDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQLHRR 183
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NII 237
L TSL+VTH EA++L RV VM G Q+G EV+ P VA F+G N++
Sbjct: 184 LKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAMNLL 243
Query: 238 EGVA--KGNILEANGVKITLPIS------VEGKVRIGVRPEDIILSTE 277
G +G E +G I LP++ K+ +G+RPE I LS++
Sbjct: 244 TGRVNNEGTHFELDG-GIELPLNGGYRQYAGRKMTLGIRPEHIALSSQ 290
>pir||QRECUC sn-Glycerol-3-phosphate transport ATP-binding protein - Escherichia
coli >gi|912455|gb|AAB18425.1| (U00039) CG Site No.
17794 [Escherichia coli] >gi|1789859|gb|AAC76475.1|
(AE000421) ATP-binding component of sn-glycerol
3-phosphate transport system [Escherichia coli K12]
Length = 369
Score = 195 bits (491), Expect = 6e-49
Identities = 112/288 (38%), Positives = 179/288 (61%), Gaps = 13/288 (4%)
Query: 2 LRVESVSK--DYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
L++++V+K D K ++ ++ DV E +++GPSG GK+ LL ++AG+ EG I +
Sbjct: 17 LKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTEGDIWI 76
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
N VT P+ R +A + Q+YAL+PHM+V +N+A+GLK+R + +Q+I +VKE +++L
Sbjct: 77 NDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMGKQQIAERVKEAARILE 136
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
++ LL R+PR LSGG++QRVA+ RA+V +P + L DEP +NLD + + + E++ +
Sbjct: 137 LDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDEPLSNLDAKLRVQMRLELQQLHRR 196
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NII 237
L TSL+VTH EA++L RV VM G Q+G EV+ P VA F+G N++
Sbjct: 197 LKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGTPVEVYEKPASLFVASFIGSPAMNLL 256
Query: 238 EGVA--KGNILEANGVKITLPIS------VEGKVRIGVRPEDIILSTE 277
G +G E +G I LP++ K+ +G+RPE I LS++
Sbjct: 257 TGRVNNEGTHFELDG-GIELPLNGGYRQYAGRKMTLGIRPEHIALSSQ 303
>pir||S75652 ABC-type transport protein sll1878 - Synechocystis sp. (strain PCC
6803) >gi|1653298|dbj|BAA18213.1| (D90912) ABC
transporter [Synechocystis sp.]
Length = 368
Score = 195 bits (491), Expect = 6e-49
Identities = 116/293 (39%), Positives = 172/293 (58%), Gaps = 22/293 (7%)
Query: 1 MLRVESVSKDYKEFK---LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRI 57
+L V+ + K ++ L+ I+F++ E +LGPSG GKT LL IIAG P G +
Sbjct: 18 VLTVQDLGKSFRGQSTPVLQKINFNLAPGEILGLLGPSGCGKTTLLRIIAGFETPTSGTV 77
Query: 58 ILNGVDVTSY----PPEKRNLAYIPQDYALFPHMTVYDNIAFGL--KLRRISRQEIDRKV 111
L G V+ PPE+R + QDYALFPH+T+ DNIAFGL K ++++RQ+I +V
Sbjct: 78 HLEGDCVSGENGLTPPEQRQTGMVFQDYALFPHLTITDNIAFGLRHKSQKLNRQQIQGRV 137
Query: 112 KEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMT 171
E+ ++G+ L R P LSGG++QR+A+ARAL +P L+LLDEP +NLDVQ + R
Sbjct: 138 AEVLHLVGLTGLEKRYPHELSGGQQQRIALARALAPKPNLILLDEPLSNLDVQVRQRLRH 197
Query: 172 EMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
E++ K G ++ VTH EEA+++ DR+GVM RG L Q+G +E++ +P VA F+
Sbjct: 198 EIRHILKATGTAAIFVTHDQEEAMAISDRIGVMYRGNLEQIGTPEEIYRSPASRFVAEFV 257
Query: 232 GFENIIEGVAKGNI---------LEANGVKITLPISVEGKVRIGVRPEDIILS 275
N + +G + L G++ LP E + +R E+I LS
Sbjct: 258 TQANFVPAQRQGTLWATEFGQWPLTFQGIQPELPSVGE----LMLREEEIELS 306
>dbj|BAB03314.1| (AB011415) AlgS [Sphingomonas sp.]
Length = 363
Score = 195 bits (491), Expect = 6e-49
Identities = 116/322 (36%), Positives = 193/322 (59%), Gaps = 15/322 (4%)
Query: 4 VESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+++V K Y K + +S D++ E +++GPSG GK+ L ++AG+ E G I ++G
Sbjct: 7 IQNVVKRYDKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGR 66
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
+ P+ R++A + Q+YAL+PH+ V DNI+FGL+L+R + ID VK + +LG++
Sbjct: 67 VINDLAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAADILGLQP 126
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
LL RKP LSGG++QRVA+ RA+V +P++ L DEP +NLD + +++ E+K + LG
Sbjct: 127 LLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDEPLSNLDAKLRTQMRAEIKRLHQRLGT 186
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE-- 238
T ++VTH EA++L DR+ VM G + Q+G ++F +P + VA F+G N++
Sbjct: 187 TVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMPAR 246
Query: 239 -GVAKGNILEAN-GVKITL------PISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAE 290
V +E N G +I+L ++ +V G+RPED+ L + V+ S R + +A
Sbjct: 247 IAVDSTQHVELNGGNRISLLPRAGTHLAPGQEVVFGIRPEDVTL--DGVEGSERAQIKAT 304
Query: 291 VIGIEELGPLVRVNLKIGGITL 312
V +E LG ++ +G +L
Sbjct: 305 VDIVEPLGSESILHATVGDHSL 326
>dbj|BAB06849.1| (AP001517) sulfate ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 357
Score = 195 bits (491), Expect = 6e-49
Identities = 118/343 (34%), Positives = 191/343 (55%), Gaps = 17/343 (4%)
Query: 4 VESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+++VSK + F+ L DI+ ++ E +LGPSG+GKT LL IIAG+ D+G I +
Sbjct: 5 IQNVSKSFGSFQALADINLSIETGELVALLGPSGSGKTSLLRIIAGLEAADQGDIYFHKD 64
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLR----RISRQEIDRKVKEISKVL 118
VT R + ++ Q YALFPHMTV DNI++GL+++ R S++EI KV+E+ ++
Sbjct: 65 KVTQTHAASRQVGFVFQHYALFPHMTVADNISYGLRVKPRKERPSKKEIAEKVRELLALV 124
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
+E + R P LSGG++QR+A+ARAL +EP++LLLDEPF LD + + ++
Sbjct: 125 KLEGMDDRYPAQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRKDLRKWLRKLHN 184
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
E TS+ VTH EEA+ + DRV VM +G++ QVG EV+ P V FLG N+
Sbjct: 185 EFQVTSVFVTHDQEEALDVSDRVVVMNQGKIEQVGSPDEVYEQPKSPFVYDFLGNVNVFT 244
Query: 239 GVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEP-----VKTSARNEFRAEVIG 293
G K ++ + ++ P + + ++ ++ T P + ++ A +
Sbjct: 245 GRVKQGFVQLDKHQLKTP-----TISKDIHDQEAVVYTRPHHMEISRKKQKDAIPAVIEH 299
Query: 294 IEELGPL--VRVNLKIGGITLKAFITRSSLIELGISEGREVYV 334
I +GP+ + +N K L+ + + EL + +G V+V
Sbjct: 300 IHMVGPIAFLELNWKDDEEVLQVELAKDRFHELDLKKGETVFV 342
>pir||F71279 probable sugar ABC transporter, ATP-binding protein (ugpC) -
syphilis spirochete >gi|3323114|gb|AAC65771.1|
(AE001251) sugar ABC transporter, ATP-binding protein
(ugpC) [Treponema pallidum]
Length = 387
Score = 195 bits (490), Expect = 7e-49
Identities = 112/311 (36%), Positives = 184/311 (59%), Gaps = 21/311 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
++D++ + E + +GPSG GK+ L IIAG+ + G + ++G + P+ RN+A
Sbjct: 20 VKDVTITAESGEFVVFIGPSGCGKSTALRIIAGLEDICSGDLYIDGEHMNHVTPKDRNIA 79
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q+YAL+PHM V+DN+AFGL++R+I +QEI R+V E ++VL IE LL RKP+ LSGG+
Sbjct: 80 MVFQNYALYPHMNVFDNMAFGLRIRKIPQQEIIRRVHEAARVLDIEPLLARKPKALSGGQ 139
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ RA+V P++ L DEP +NLD + + + +E+ + K L T ++VTH EA+
Sbjct: 140 RQRVAVGRAIVRNPKVFLFDEPLSNLDAKLRVQMRSEISLLHKRLKATMIYVTHDQMEAM 199
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKI-- 253
++ D++ +M G + Q+G ++ +P + VA+F+G + + + +G+KI
Sbjct: 200 TMADKIVIMKDGCVQQIGSPLHIYQHPANTFVAQFIG-SPPMNCFPVTIVKDEHGIKIDA 258
Query: 254 -------TLPIS------VEGKVRIGVRPEDIILSTEPVKTSAR---NEFRAEVIGIEEL 297
+P S + +V G+RPE I TE +T AR N + +V+ +E L
Sbjct: 259 GLFVLRPDIPASFLLKNYIGTQVVFGLRPEAITPRTE--ETLARECANVIQLKVLAVEAL 316
Query: 298 GPLVRVNLKIG 308
G V L G
Sbjct: 317 GAETFVYLDAG 327
>pir||C81179 spermidine/putrescine ABC transporter, ATP-binding protein NMB0610
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7225840|gb|AAF41037.1| (AE002416)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 419
Score = 194 bits (489), Expect = 9e-49
Identities = 114/320 (35%), Positives = 185/320 (57%), Gaps = 13/320 (4%)
Query: 2 LRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L+++ + K + + + + +I D+ + E F +LG SG+GK+ LL ++AG+ P++G+IIL+
Sbjct: 58 LKIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMESPNQGKIILD 117
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D+T P R + + Q YALFPHMTV NIAFGLK ++ + EI +V+E+ +++ +
Sbjct: 118 GQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVEEMLRLVQM 177
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
RKP LSGG++QR+A+AR+L P++LLLDEP LD + + + E+ +++
Sbjct: 178 TKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLELVNTLEQV 237
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G T + VTH EEA+++ R+ +M G+L QVG +V+ P A F+G NI +GV
Sbjct: 238 GVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGV 297
Query: 241 -----AKGNILEANGVKITLPIS------VEGKVRIGVRPEDIILSTE-PVKTSARNEFR 288
A ++E G++ + I E + + +RPEDI L E P N +
Sbjct: 298 VIEDHADYAVIECEGLENHVRIDHGLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAK 357
Query: 289 AEVIGIEELGPLVRVNLKIG 308
V I LG ++K+G
Sbjct: 358 GTVKEIAYLGSFAIYHIKLG 377
>sp|P44531|AFUC_HAEIN PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1074273|pir||D64143 probable ABC-type transport
protein HI0126 - Haemophilus influenzae (strain Rd KW20)
>gi|1573081|gb|AAC21800.1| (U32698) ferric ABC
transporter, ATP-binding protein (afuC) [Haemophilus
influenzae Rd]
Length = 328
Score = 194 bits (487), Expect = 2e-48
Identities = 103/303 (33%), Positives = 182/303 (59%), Gaps = 7/303 (2%)
Query: 2 LRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L +++++K + K + ++ +K+ +LGPSG GKT +L ++AG+ P G+I ++
Sbjct: 7 LVLKNITKAFGKAVVIDNLDLTIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFID 66
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G DVT + R++ + Q YALFPHM++ DN+ +GLK++ I ++E ++VKE +++ +
Sbjct: 67 GEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLKMQGIGKEERAQRVKEALELVDL 126
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
R +SGG++QRVA+ARALV++P++LL DEP +NLD + +++ ++ L
Sbjct: 127 AGFEDRFVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQRL 186
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G TSL+VTH EA ++ D V VM +G+++Q KE++ P +A F+G +I +G
Sbjct: 187 GITSLYVTHDQTEAFAVSDEVIVMNKGKIMQKAPAKELYLRPNSLFLANFMGESSIFDGK 246
Query: 241 AKGNILEANGVKITLPISV-----EGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIE 295
+ + + NG + L + +G+ +G+RPE I L+ E + R E ++ V +
Sbjct: 247 LENGVADINGYSVPLKDAAQFNLPDGECLVGIRPEAIYLAAEG-SDAQRCEIKSAVYMGQ 305
Query: 296 ELG 298
LG
Sbjct: 306 PLG 308
>pir||MMECMK inner membrane protein malK - Escherichia coli
>gi|409797|gb|AAC43129.1| (U00006) cytoplasmic membrane
protein for maltose uptake [Escherichia coli]
>gi|1790467|gb|AAC77005.1| (AE000476) ATP-binding
component of transport system for maltose [Escherichia
coli K12]
Length = 371
Score = 193 bits (486), Expect = 2e-48
Identities = 110/325 (33%), Positives = 185/325 (56%), Gaps = 21/325 (6%)
Query: 2 LRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+++++V+K + E + +DI+ D+ + E + +GPSG GK+ LL +IAG+ G + +
Sbjct: 4 VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIG 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
+ PP +R + + Q YAL+PH++V +N++FGLKL ++ I+++V ++++VL +
Sbjct: 64 EKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
HLL RKP+ LSGG++QRVAI R LV EP + LLDEP +NLD + + E+ K L
Sbjct: 124 AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G T ++VTH EA++L D++ V+ GR+ QVG E++ P D VA F+G +
Sbjct: 184 GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLP 243
Query: 241 AKGNILEANGVKITLP---------------ISVEGKVRIGVRPEDIILSTEPVKTSARN 285
K + V++ LP + V + +G+RPE ++ S A
Sbjct: 244 VKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPS-----DIADV 298
Query: 286 EFRAEVIGIEELGPLVRVNLKIGGI 310
EV +E+LG +++++I I
Sbjct: 299 ILEGEVQVVEQLGNETQIHIQIPSI 323
>pir||D83194 polyamine transport protein PotA PA3607 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9949764|gb|AAG06995.1|AE004781_3 (AE004781)
polyamine transport protein PotA [Pseudomonas
aeruginosa]
Length = 363
Score = 193 bits (486), Expect = 2e-48
Identities = 114/313 (36%), Positives = 176/313 (55%), Gaps = 19/313 (6%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L + +V++ + +F D +S + E F +LGPSG GKT LL ++AG +PD G I L
Sbjct: 5 LLEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRL 64
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
NG D+ PEKR + + Q YALFPHM+V NIAF LK+ +++ EID +V++ K +
Sbjct: 65 NGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMAGVAKSEIDARVEQALKDVR 124
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
+ R P LSGG++QRVAIARALV P LLLLDEP + LD + + E+ +K+
Sbjct: 125 LADKGGRMPTQLSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELINLQKD 184
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG 239
+G T ++VTH EA++L R+ VM +GR+ Q+ + ++S P VA F+G N+++
Sbjct: 185 VGITFVYVTHDQGEALALSHRIAVMNQGRVEQLDAPETIYSFPRSRFVADFIGQCNLLDA 244
Query: 240 VAKGNILEANGVKITLPISVEGKVR--------------IGVRPEDIILSTEPVKTSARN 285
+ +G ++ + + G+V+ + +RPE I L+ S
Sbjct: 245 TVEA----VDGERVRIDLRGLGEVQALKSFDAQPGEACVLTLRPEKIRLAQSVTADSDEV 300
Query: 286 EFRAEVIGIEELG 298
FR V + LG
Sbjct: 301 HFRGRVAELLYLG 313
>pir||B81147 sulfate ABC transporter, ATP-binding protein NMB0879 [imported] -
Neisseria meningitidis (group B strain MD58)
>gi|7226117|gb|AAF41290.1| (AE002440) sulfate ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 357
Score = 192 bits (484), Expect = 4e-48
Identities = 116/339 (34%), Positives = 184/339 (54%), Gaps = 12/339 (3%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ +++++K + F L++I+ +V + +LGPSG GKT LL IIAG+ D G I+ +
Sbjct: 3 ITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTLLRIIAGLENADGGNILFD 62
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGL----KLRRISRQEIDRKVKEISK 116
G DVT+ +R + ++ Q YALF HM V+DN+AFGL K R S+ +I KV+E+ K
Sbjct: 63 GQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVLPKSERPSKGQIRAKVEELLK 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ + HL P LSGG++QR+A+ARAL +EP+LLLLDEPF LD + + T ++
Sbjct: 123 LVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLLDEPFGALDAKVRKELRTWLRDI 182
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
LG TS+ VTH EEA+ + D + VM G++ Q G + ++ P + V FLG +
Sbjct: 183 HHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQTGSAEAIYRKPENAFVTEFLGETDA 242
Query: 237 IEGVAKGNILEANGVKITLPISVEGKVRIG---VRPEDIILSTEPVKTSARNEFRAEVIG 293
EG + NG L + + + +RP + ++ E AE+
Sbjct: 243 FEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYIRPHEWQIAAE----HETPMICAEIEK 298
Query: 294 IEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREV 332
I +G L + +K + + S I+EG+E+
Sbjct: 299 IHAVGALTHILVKHDKQDVHITLAGSDAARYPIAEGKEL 337
>sp|P23858|POTA_ECOLI SPERMIDINE/PUTRESCINE TRANSPORT ATP-BINDING PROTEIN POTA
>gi|96440|pir||A40840 spermidine/putrescine transport
protein potA [validated] - Escherichia coli
>gi|147326|gb|AAC37038.1| (M64519) transport protein
[Escherichia coli] >gi|1651555|dbj|BAA35948.1| (D90748)
Spermidine/putrescine transport protein A [Escherichia
coli] >gi|1787370|gb|AAC74210.1| (AE000212) ATP-binding
component of spermidine/putrescine transport
[Escherichia coli K12]
Length = 378
Score = 192 bits (483), Expect = 5e-48
Identities = 105/265 (39%), Positives = 160/265 (59%), Gaps = 12/265 (4%)
Query: 19 ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYIP 78
+ + E +LGPSG GKT +L +IAG+ D GRI+L+ D+T P E R + +
Sbjct: 36 LDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVF 95
Query: 79 QDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQR 138
Q YALFPHMTV++N+AFGL++++ EI +V E +++ +E RKP LSGG++QR
Sbjct: 96 QSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQR 155
Query: 139 VAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLG 198
VAIARA+V +P LLLLDE + LD + + + E+K +++LG T + VTH EEA+++
Sbjct: 156 VAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMS 215
Query: 199 DRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG---------FENIIEGVAKGNILEAN 249
DR+ VM GR+ Q G +E++ P + VA F+G E + E + N+ E
Sbjct: 216 DRIVVMRDGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANV-EGR 274
Query: 250 GVKITLPISVE--GKVRIGVRPEDI 272
I + +VE K+ + +RPED+
Sbjct: 275 ECNIYVNFAVEPGQKLHVLLRPEDL 299
>pir||G81926 probable polyamine permease ATP-binding protein NMA0816 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379535|emb|CAB84098.1| (AL162754) putative
polyamine permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 374
Score = 192 bits (482), Expect = 6e-48
Identities = 113/319 (35%), Positives = 184/319 (57%), Gaps = 13/319 (4%)
Query: 2 LRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L+++ + K + + + + +I D+ + E F +LG SG+GK+ LL ++AG+ P++G+IIL+
Sbjct: 13 LQIQGLVKKFGDNYAVDNIDLDIYQHEIFALLGSSGSGKSTLLRMLAGMENPNQGKIILD 72
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G D+T P R + + Q YALFPHMTV NIAFGLK ++ + EI +V+E+ +++ +
Sbjct: 73 GQDITKLAPYDRPINMMFQSYALFPHMTVEQNIAFGLKQDKMPKGEIAARVEEMLRLVQM 132
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
RKP LSGG++QR+A+AR+L P++LLLDEP LD + + + E+ +++
Sbjct: 133 TKFAKRKPHQLSGGQQQRIALARSLAKRPKILLLDEPLGALDKKLRQQTQLELVNTLEQV 192
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G T + VTH EEA+++ R+ +M G+L QVG +V+ P A F+G NI +GV
Sbjct: 193 GVTCIMVTHDQEEAMTMATRIAIMSDGQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGV 252
Query: 241 -----AKGNILEANGVKITLPIS------VEGKVRIGVRPEDIILSTE-PVKTSARNEFR 288
A ++E G++ + I E + + +RPEDI L E P N +
Sbjct: 253 VIEDHADYAVIECEGLENHVRIDHGLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAK 312
Query: 289 AEVIGIEELGPLVRVNLKI 307
V I LG ++K+
Sbjct: 313 GTVKEIAYLGSFAIYHIKL 331
>gb|AAC34719.1| (U49400) orfx protein; similar to MalK and other inner membrane ATP
binding transport proteins [Escherichia coli]
Length = 322
Score = 191 bits (480), Expect = 1e-47
Identities = 101/292 (34%), Positives = 171/292 (57%), Gaps = 12/292 (4%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
++D + ++ +E + + SG GK+ L +IAG+ E G ++++G + P + RN+A
Sbjct: 20 VKDFNLEIADKEFIVFVAASGCGKSTTLRMIAGLEEISGGDLLIDGKRMNDVPAKARNIA 79
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q+YAL+PHMTVYDN+AFGLK+++I+++ ID +V +++LG+ L RKP LSGG+
Sbjct: 80 MVFQNYALYPHMTVYDNMAFGLKMQKIAKEVIDERVNWAAQILGLREYLKRKPGALSGGQ 139
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ RA+V E + L+DEP +NLD + + + E+ ++L T ++VTH EA+
Sbjct: 140 RQRVALGRAIVREAGVFLMDEPLSNLDAKLRVQMRAEISKLHQKLNTTMIYVTHDQTEAM 199
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEGVAKGNILEANGVKI 253
++ R+ +M G + QVG K V++ P + V+ F+G N I G G+ +K+
Sbjct: 200 TMATRIVIMKDGIVQQVGAPKTVYNQPANMFVSGFIGSPAMNFIRGTIDGDKFVTETLKL 259
Query: 254 TLP----------ISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIE 295
T+P S+ + +G+RPEDI + + AE+ G E
Sbjct: 260 TIPEEKLAVLKTQESLHKPIVMGIRPEDIHPDAQEENNISAKISVAELTGAE 311
>sp|P02914|MALK_ECOLI MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
Length = 371
Score = 190 bits (479), Expect = 1e-47
Identities = 109/325 (33%), Positives = 184/325 (56%), Gaps = 21/325 (6%)
Query: 2 LRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+++++V+K + E + +DI+ D+ + E + +GPSG GK+ LL +IAG+ G + +
Sbjct: 4 VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIG 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
+ PP +R + + Q YAL+PH++V +N++FGLK ++ I+++V ++++VL +
Sbjct: 64 EKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKPAGAKKEVINQRVNQVAEVLQL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
HLL RKP+ LSGG++QRVAI R LV EP + LLDEP +NLD + + E+ K L
Sbjct: 124 AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G T ++VTH EA++L D++ V+ GR+ QVG E++ P D VA F+G +
Sbjct: 184 GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLP 243
Query: 241 AKGNILEANGVKITLP---------------ISVEGKVRIGVRPEDIILSTEPVKTSARN 285
K + V++ LP + V + +G+RPE ++ S A
Sbjct: 244 VKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPS-----DIADV 298
Query: 286 EFRAEVIGIEELGPLVRVNLKIGGI 310
EV +E+LG +++++I I
Sbjct: 299 ILEGEVQVVEQLGNETQIHIQIPSI 323
>pir||F64751 probable ABC-type transport protein b0262 - Escherichia coli
>gi|1552831|gb|AAB08683.1| (U70214) hypothetical
[Escherichia coli] >gi|1786457|gb|AAC73365.1| (AE000134)
putative ATP-binding component of a transport system
[Escherichia coli K12]
Length = 352
Score = 190 bits (477), Expect = 2e-47
Identities = 101/305 (33%), Positives = 177/305 (57%), Gaps = 9/305 (2%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
+I+ + + + +LGPSG GKT +L ++AG+ +P EG+I ++G DVT ++R++ +
Sbjct: 28 NINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMV 87
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
Q YALFPHM++ +N+ +GLK+ + R E+ +VKE ++ +E R +SGG++Q
Sbjct: 88 FQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQ 147
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ARAL+++P++LL DEP +NLD + +++ +K+ TSL+VTH EA ++
Sbjct: 148 RVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAFAV 207
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITLPI 257
D V VM +G ++Q+G ++++ P +A F+G N+ ++ G + P+
Sbjct: 208 SDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPATFSDGYVDIYGYHLPRPL 267
Query: 258 --SVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGG--ITLK 313
+G+ +GVRPE I LS ++ R + + +GP V ++ G I L+
Sbjct: 268 HFGTQGEGMVGVRPEAITLSDRGEESQ-----RCVIRHVAYMGPQYEVTVEWHGQEILLQ 322
Query: 314 AFITR 318
TR
Sbjct: 323 VNATR 327
>emb|CAA70125.1| (Y08921) msiK [Streptomyces reticuli]
Length = 377
Score = 190 bits (477), Expect = 2e-47
Identities = 100/257 (38%), Positives = 162/257 (62%), Gaps = 9/257 (3%)
Query: 23 VKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYIPQDYA 82
++ E +++GPSG GK+ L ++AG+ + + G I + DVT PP+ R++A + Q+YA
Sbjct: 28 IEDGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTHLPPKDRDIAMVFQNYA 87
Query: 83 LFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIA 142
L+PHMTV DN+ F LK+ + + EI +KV+E +K+L + L RKP+ LSGG++QRVA+
Sbjct: 88 LYPHMTVADNMGFALKIAGVPKAEIRQKVEEAAKILDLTQYLDRKPKALSGGQRQRVAMG 147
Query: 143 RALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVG 202
RA+V EP++ L+DEP +NLD + + T++ ++ LG T+++VTH EA+++GDRV
Sbjct: 148 RAIVREPQVFLMDEPLSNLDAKLRVSTRTQIASLQRRLGITTVYVTHDQVEAMTMGDRVA 207
Query: 203 VMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE------GVAKGN-ILEANGVKI 253
V+ G L QV + ++ P + VA F+G N++E GV GN ++ N +
Sbjct: 208 VLKDGLLQQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPITDGGVKFGNSVVPVNREAL 267
Query: 254 TLPISVEGKVRIGVRPE 270
+ + V +GVRPE
Sbjct: 268 SAADKGDRTVTVGVRPE 284
>sp|P19566|MALK_SALTY MALTOSE/MALTODEXTRIN TRANSPORT ATP-BINDING PROTEIN MALK
>gi|2052275|emb|CAA38188.1| (X54292) malK [Salmonella
typhimurium]
Length = 369
Score = 190 bits (477), Expect = 2e-47
Identities = 105/307 (34%), Positives = 171/307 (55%), Gaps = 18/307 (5%)
Query: 17 RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAY 76
+DI+ D+ E + +GPSG GK+ LL +IAG+ G + + + PP +R +
Sbjct: 20 KDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGETRMNDIPPAERGVGM 79
Query: 77 IPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEK 136
+ Q YAL+PH++V +N++FGLKL ++ ++++V ++++VL + HLL RKP+ LSGG++
Sbjct: 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEVMNQRVNQVAEVLQLAHLLERKPKALSGGQR 139
Query: 137 QRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAIS 196
Q VAI R LV EP + LLDEP +NLD + + E+ K LG T ++VTH EA++
Sbjct: 140 QAVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMT 199
Query: 197 LGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITLP 256
L D++ V+ GR+ QVG E++ P D VA F+G + K V++ LP
Sbjct: 200 LADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIEQVQVELP 259
Query: 257 -------------ISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRV 303
+ V + +G+RPE ++ S A EV +E+LG ++
Sbjct: 260 NRQQIWLPVESRGVQVGANMSLGIRPEHLLPS-----DIADVTLEGEVQVVEQLGHETQI 314
Query: 304 NLKIGGI 310
+++I I
Sbjct: 315 HIQIPAI 321
>sp|P55604|Y4OS_RHISN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN Y4OS
>gi|2182563|gb|AAB91805.1| (AE000089) Y4oS [Rhizobium
sp. NGR234]
Length = 371
Score = 190 bits (477), Expect = 2e-47
Identities = 106/319 (33%), Positives = 180/319 (56%), Gaps = 23/319 (7%)
Query: 4 VESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+ +V+K Y + +SF ++ E +++GPSG GK+ LL ++AG+ E G +++
Sbjct: 22 IRNVTKRYGALTVIPQLSFRIEDGEFVVLVGPSGCGKSTLLRMLAGLEEISGGDLLMGAD 81
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
+ P ++R++A + Q+YAL+PHMTV +N+ F LKLR+ R EID +V + + +LG+
Sbjct: 82 VINDRPAKERDMAIVFQNYALYPHMTVAENMGFALKLRKRPRAEIDERVDKAAAILGLGK 141
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
LL R PR LSGG++QRVA+ RA+V +P++ L DEP +NLD + + + E+K + L
Sbjct: 142 LLDRYPRALSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRAEIKALHQRLKI 201
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAK 242
T+++VTH EA+++ D++ VM GR+ Q+G E++ P + VA F+G ++
Sbjct: 202 TTVYVTHDQIEAMTMADKIVVMNEGRVEQMGTPLELYDRPANIFVAGFIGSPSM--NFLP 259
Query: 243 GNILEANGVKITLPISV------------EGKVRIGVRPEDIILSTEPVKTSARNEFRAE 290
+ NG + P V +V G+RPE + L + AE
Sbjct: 260 ATVAATNGPLLKTPEGVALPIDGGPTLTGRSEVTYGIRPEHLQLGETGIP--------AE 311
Query: 291 VIGIEELGPLVRVNLKIGG 309
V+ +E G ++ + +GG
Sbjct: 312 VVVVEPTGSETQLYVTVGG 330
>sp|P37009|AFUC_ECOLI PUTATIVE FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
Length = 348
Score = 190 bits (477), Expect = 2e-47
Identities = 101/305 (33%), Positives = 177/305 (57%), Gaps = 9/305 (2%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
+I+ + + + +LGPSG GKT +L ++AG+ +P EG+I ++G DVT ++R++ +
Sbjct: 24 NINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMV 83
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
Q YALFPHM++ +N+ +GLK+ + R E+ +VKE ++ +E R +SGG++Q
Sbjct: 84 FQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQ 143
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ARAL+++P++LL DEP +NLD + +++ +K+ TSL+VTH EA ++
Sbjct: 144 RVALARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAFAV 203
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITLPI 257
D V VM +G ++Q+G ++++ P +A F+G N+ ++ G + P+
Sbjct: 204 SDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPATFSDGYVDIYGYHLPRPL 263
Query: 258 --SVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGG--ITLK 313
+G+ +GVRPE I LS ++ R + + +GP V ++ G I L+
Sbjct: 264 HFGTQGEGMVGVRPEAITLSDRGEESQ-----RCVIRHVAYMGPQYEVTVEWHGQEILLQ 318
Query: 314 AFITR 318
TR
Sbjct: 319 VNATR 323
>gb|AAD03804.1| (AF047427) ATPase FbpC [Pasteurella haemolytica]
Length = 336
Score = 189 bits (476), Expect = 3e-47
Identities = 125/334 (37%), Positives = 189/334 (56%), Gaps = 21/334 (6%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
L+++ V + E +LG SG GKT LL+ IAG++ ++G I L G + S E+R +
Sbjct: 19 LQNLHLAVNQNEIICLLGASGCGKTTLLKAIAGLLPIEQGDIHLAGECLKSKAVEERQIG 78
Query: 76 YIPQDYALFPHMTVYDNIAFGL-KLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGG 134
I QDYALFPH+TV DNI FGL KL ++ ++ I K+ + + G E R P LSGG
Sbjct: 79 LIFQDYALFPHLTVADNIQFGLSKLPKVQQKAITEKMLSVVHLQGFES---RFPHELSGG 135
Query: 135 EKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEA 194
++QRVAIARAL +PELLLLDEPF+N+D QT+ + E+K K ++ VTHS EEA
Sbjct: 136 QQQRVAIARALACQPELLLLDEPFSNIDSQTRYAMIQEIKQILKSQNVPAIFVTHSKEEA 195
Query: 195 ISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE-GVAKGNIL--EANGV 251
+ D++ VM +G+++Q G E++ +PV+ VA FLG N + V + N+L
Sbjct: 196 FAFADKIAVMDQGKIIQFGKPNELYHSPVNPFVADFLGGTNYLNCNVTEDNVLCSPIGEF 255
Query: 252 KITLPISVE-GKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGGI 310
++ ++V+ G+ R +RPE IIL + +V+G LG R ++I GI
Sbjct: 256 RLFPEMNVQKGRYRWLLRPEQIILKPNELGL-------GKVVGKLFLGLYYRYQVEIKGI 308
Query: 311 TLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
+ + ++ I G +V V F+ +F
Sbjct: 309 EIVTYQSQELKI------GEQVEVGFQVREFILF 336
>emb|CAB77334.1| (AL160331) ABC transporter ATP-binding protein [Streptomyces
coelicolor A3(2)]
Length = 378
Score = 189 bits (476), Expect = 3e-47
Identities = 121/347 (34%), Positives = 197/347 (55%), Gaps = 23/347 (6%)
Query: 19 ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYIP 78
+ D+ E +++GPSG GK+ L ++AG+ + + G I + DVT PP+ R++A +
Sbjct: 24 LDIDIADGEFLVLVGPSGCGKSTSLRMLAGLEDVNGGAIRIGDRDVTHLPPKDRDIAMVF 83
Query: 79 QDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQR 138
Q+YAL+PHM+V DN+ F LK+ +++ EI +KV+E +K+L + L RKP+ LSGG++QR
Sbjct: 84 QNYALYPHMSVADNMGFALKIAGVNKAEIRQKVEEAAKILDLTEYLDRKPKALSGGQRQR 143
Query: 139 VAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLG 198
VA+ RA+V EP++ L+DEP +NLD + + T++ ++ LG T+++VTH EA+++G
Sbjct: 144 VAMGRAIVREPQVFLMDEPLSNLDAKLRVSTRTQIASLQRRLGITTVYVTHDQVEAMTMG 203
Query: 199 DRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE------GVAKGNILEANG 250
DRV V+ G L QV + ++ P + VA F+G N++E GV GN +
Sbjct: 204 DRVAVLKDGLLQQVDSPRNMYDKPANLFVAGFIGSPAMNLVEVPITDGGVKFGNSVVPVN 263
Query: 251 VKITLPISVEG--KVRIGVRPE--DII-LSTEPVKTSARNEFRA------EVIGIEELGP 299
S +G V +GVRPE D++ L+ KT +++ A V +EE G
Sbjct: 264 RDALKAASDKGDRTVTVGVRPEHFDVVELNGGAAKTLSKDSADAPAGLAVSVNVVEETGA 323
Query: 300 --LVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
+ +++GG T + SS +G V+V + I VF
Sbjct: 324 DGYIYGTVEVGGETKDLVVRVSS--RAVPEKGATVHVVPRPGEIHVF 368
>pir||T45204 probable sugar ABC transporter ugpC [imported] - Mycobacterium
leprae >gi|699112|gb|AAA62878.1| (U15180) ugpC gene
product [Mycobacterium leprae]
Length = 392
Score = 189 bits (474), Expect = 5e-47
Identities = 113/287 (39%), Positives = 168/287 (58%), Gaps = 23/287 (8%)
Query: 4 VESVSKDYKE--FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNG 61
+E V+K+Y + D+S V E I++GPSG GKT L +IAG+ + G + ++G
Sbjct: 6 LEHVNKNYPNGATAVHDLSITVADGEFLILIGPSGCGKTTTLNMIAGLEDISSGELRIDG 65
Query: 62 VDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIE 121
V P+ R++A + Q YAL+PHMTV NIAF L L ++ + EI +KV E +++L +
Sbjct: 66 DRVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLMLAKVKKAEIAQKVSETAQILDLT 125
Query: 122 HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELG 181
LL RKP LSGG++QRVA+ RA+V P+ L+DEP +NLD + + R E+ ++ LG
Sbjct: 126 DLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVRTRGEIARLQRRLG 185
Query: 182 FTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVA 241
T+++VTH EA++LGDRV VM G + Q+G E++ PV+ VA F+G + A
Sbjct: 186 ATTVYVTHDQTEAMTLGDRVVVMRSGVVQQIGTPDELYERPVNLFVAGFIGSPVMNFFPA 245
Query: 242 KGNILEANGVKITLPIS----------------VEGKVRIGVRPEDI 272
K L NG +TLP+ V +V +GVRPE +
Sbjct: 246 K---LTPNG--LTLPLGELNLSRDVQAMIGQHPVPDRVIVGVRPEHL 287
>pir||C70693 probable ugpC protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1648888|emb|CAB03654.1| (Z81331) ugpC [Mycobacterium
tuberculosis]
Length = 360
Score = 189 bits (474), Expect = 5e-47
Identities = 102/283 (36%), Positives = 166/283 (58%), Gaps = 6/283 (2%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
++ D+ E +++GPSG GK+ L ++AG+ + GRI + VDVT PP R++A +
Sbjct: 23 NLDLDIADGEFLVLVGPSGCGKSTTLRVLAGLEPIESGRISIGDVDVTHLPPRARDVAMV 82
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
Q+YAL+P+MTV N+ F L+ +SR + R+V E++ +L + LL RKP LSGG++Q
Sbjct: 83 FQNYALYPNMTVAANMGFALRNAGMSRADTRRRVLEVADMLELTDLLDRKPAKLSGGQRQ 142
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ RA+V P + +DEP +NLD + + +++ ++ LG T+++VTH EA+++
Sbjct: 143 RVAMGRAIVRRPRVFCMDEPLSNLDAKLRVSTRSQISGLQRRLGTTTVYVTHDQVEAMTM 202
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEGVAKGNILEANGVKITL 255
GDRV V+ G L QV + ++ +PV+ VA F+G N+I+ ++ A + I +
Sbjct: 203 GDRVAVLKDGVLQQVDTPRALYDDPVNTFVATFIGAPAMNLIDAAVAHGVVRAPDLAIPV 262
Query: 256 PISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELG 298
P +V +GVRPE S + V +EELG
Sbjct: 263 PDPAAERVLVGVRPE----SWDVASIGTPGSLTVHVELVEELG 301
>pir||E70952 probable sugC protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2695824|emb|CAA15894.1| (AL021006) sugC
[Mycobacterium tuberculosis]
Length = 393
Score = 189 bits (474), Expect = 5e-47
Identities = 106/282 (37%), Positives = 170/282 (59%), Gaps = 10/282 (3%)
Query: 4 VESVSKDYKE--FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNG 61
++ V+K Y + +RD++ + E I++GPSG GKT L +IAG+ + G + + G
Sbjct: 6 LDHVNKSYPDGHTAVRDLNLTIADGEFLILVGPSGCGKTTTLNMIAGLEDISSGELRIAG 65
Query: 62 VDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIE 121
V P+ R++A + Q YAL+PHMTV NIAF L L ++ + +I +KV E +K+L +
Sbjct: 66 ERVNEKAPKDRDIAMVFQSYALYPHMTVRQNIAFPLTLAKMRKADIAQKVSETAKILDLT 125
Query: 122 HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELG 181
+LL RKP LSGG++QRVA+ RA+V P+ L+DEP +NLD + + + E+ ++ LG
Sbjct: 126 NLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDAKLRVQMRGEIAQLQRRLG 185
Query: 182 FTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVA 241
T+++VTH EA++LGDRV VM G Q+G +E++ P + VA F+G + A
Sbjct: 186 TTTVYVTHDQTEAMTLGDRVVVMYGGIAQQIGTPEELYERPANLFVAGFIGSPAMNFFPA 245
Query: 242 KGNILEANGV-----KITLPISVEGKVRIGVRPEDIILSTEP 278
+ L A G+ ++TL V+G + +PE++I+ P
Sbjct: 246 R---LTAIGLTLPFGEVTLAPEVQGVIAAHPKPENVIVGVRP 284
>pir||A83621 probable ATP-binding component of ABC transporter PA0206 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9946041|gb|AAG03595.1|AE004458_10 (AE004458)
probable ATP-binding component of ABC transporter
[Pseudomonas aeruginosa]
Length = 370
Score = 189 bits (474), Expect = 5e-47
Identities = 95/227 (41%), Positives = 146/227 (63%), Gaps = 4/227 (1%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
L+ + D++ E F +LGPSG GKT LL +IAG P EG I+L G ++ + PP +R +
Sbjct: 31 LKRVDLDIRDNEFFTLLGPSGCGKTTLLRMIAGFEFPTEGEILLYGENIAARPPFERPVN 90
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQ----EIDRKVKEISKVLGIEHLLHRKPRTL 131
+ Q YALFPHM++ +N+AFGL+ R + R EI +V+E+ ++ +E R+P L
Sbjct: 91 TVFQHYALFPHMSIAENLAFGLESRPLGRSLGKAEIAERVREMLALVQMERFADRRPGQL 150
Query: 132 SGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSF 191
SGG++QRVA+ARAL +P +LLLDEP + LD++ + E+K + + G T + VTH
Sbjct: 151 SGGQQQRVALARALAPQPRVLLLDEPLSALDLKLRQAMREELKAIQAKTGITFIFVTHDQ 210
Query: 192 EEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
EEA+++ DR+ V+ G++ QVG +E++ P + VA F+G N IE
Sbjct: 211 EEALTMSDRIAVLSEGQVQQVGPPEEIYERPGNRFVADFIGETNFIE 257
>sp|P77795|YDCT_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YDCT
>gi|7445684|pir||D64896 probable ABC-type transport
protein b1441 - Escherichia coli
>gi|1742349|dbj|BAA15070.1| (D90783)
Spermidine/putrescine transport ATP-binding protein
PotA. [Escherichia coli] >gi|1742356|dbj|BAA15076.1|
(D90784) Spermidine/putrescine transport ATP-binding
protein PotA. [Escherichia coli]
>gi|1787712|gb|AAC74523.1| (AE000241) putative
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 337
Score = 188 bits (473), Expect = 7e-47
Identities = 114/337 (33%), Positives = 190/337 (55%), Gaps = 24/337 (7%)
Query: 5 ESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVD 63
++VS+ Y + + D +S +K E F +LGPSG+GKT L +IAG + G I + G
Sbjct: 8 DNVSRLYGDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAISIFGKP 67
Query: 64 VTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHL 123
++ PP +R++ + QDYALFPHM++ DN+A+GL ++ +++++ +E + + + +
Sbjct: 68 ASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALEKVALGFV 127
Query: 124 LHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFT 183
RKP LSGG++QRVAIARALV EP +LLLDEP LD++ + + E+K ++ LG T
Sbjct: 128 HQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKLQQSLGIT 187
Query: 184 SLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKG 243
+ VTH EA+S+ DRV V GR+ QV ++++ P VA F+G N+ +G+
Sbjct: 188 FIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAGFVGTSNVFDGLMAE 247
Query: 244 NILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRV 303
+ G +RPE I L+T P + A +A ++ G R
Sbjct: 248 KLCGMTG-------------SFALRPEHIRLNT-PGELQANGTIQA----VQYQGAATRF 289
Query: 304 NLKIGGITLKAFITRSSL----IELGISEGREVYVSF 336
LK+ G K ++++++ + ++ G++V VS+
Sbjct: 290 ELKLNG-GEKLLVSQANMTGEELPATLTPGQQVMVSW 325
>pir||T35450 ABC transporter ATP binding protein - Streptomyces coelicolor
>gi|3319738|emb|CAA19904.1| (AL031035) ABC transporter
ATP binding protein [Streptomyces coelicolor A3(2)]
Length = 348
Score = 188 bits (472), Expect = 9e-47
Identities = 107/258 (41%), Positives = 145/258 (55%), Gaps = 1/258 (0%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
L D+ V + E +LGPSG+GK+ LL +AG+ D GR+ L+G D + P KR +
Sbjct: 21 LDDVGLGVAEHEVVCVLGPSGSGKSTLLRAVAGLQPLDAGRVTLDGRDQSGVPAHKREVG 80
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ QD+ LFP V NIAFG ++R SR E +V E+ +++G+ R LSGGE
Sbjct: 81 LMFQDHQLFPQRDVAGNIAFGPRMRGASRAEQQARVAELLQLVGLPGAARRSVAALSGGE 140
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ARAL P LL+LDEP LD + R + E++ LG T L VTH EA
Sbjct: 141 QQRVALARALAPRPRLLMLDEPLGQLDRSLRERLVVELRELFGRLGTTVLAVTHDQGEAF 200
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITL 255
+L DRV VM GR+ Q G EV+ P D VARFLGFEN+ E G + K+ +
Sbjct: 201 ALADRVVVMRDGRIAQSGTPLEVWQRPADAFVARFLGFENVAEASVAGQAADTPWGKVPV 260
Query: 256 PISV-EGKVRIGVRPEDI 272
P +G + VRP +
Sbjct: 261 PEDAPQGTRTVLVRPAGV 278
>sp|P16676|CYSA_ECOLI SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA >gi|7428825|pir||QRECSA
sulfate transport ATP-binding protein cysA - Escherichia
coli >gi|1788761|gb|AAC75475.1| (AE000329) ATP-binding
component of sulfate permease A protein; chromate
resistance [Escherichia coli K12]
>gi|1799841|dbj|BAA16296.1| (D90871) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
>gi|1799851|dbj|BAA16305.1| (D90872) sulfate/thiosulfate
transport protein cysA [Escherichia coli]
Length = 365
Score = 187 bits (471), Expect = 1e-46
Identities = 107/281 (38%), Positives = 159/281 (56%), Gaps = 7/281 (2%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ + ++ K + + L DIS D+ + +LGPSG+GKT LL IIAG+ G I +
Sbjct: 3 IEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFH 62
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKL----RRISRQEIDRKVKEISK 116
G DV+ R + ++ Q YALF HMTV+DNIAFGL + R + I KV ++ +
Sbjct: 63 GTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLE 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ + HL R P LSGG+KQRVA+ARAL +EP++LLLDEPF LD Q + ++
Sbjct: 123 MVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQL 182
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
+EL FTS+ VTH EEA + DRV VM +G + Q +V+ P V F+G N
Sbjct: 183 HEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEVNR 242
Query: 237 IEGVAKGNILEANGVKITLPI--SVEGKVRIGVRPEDIILS 275
++G +G + L + +G V + +RP ++ +S
Sbjct: 243 LQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDIS 283
>gb|AAB88581.1| (M93437) CycB [Thermus thermophilus]
Length = 264
Score = 187 bits (469), Expect = 2e-46
Identities = 99/232 (42%), Positives = 147/232 (62%), Gaps = 3/232 (1%)
Query: 6 SVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVT 65
S+ K + F+L ++ V + E +LGPSG+GK+ LL ++AG++ PD G + G D+
Sbjct: 31 SLEKAFSGFRL-SVALSVAEGETLALLGPSGSGKSTLLRLVAGLLRPDRGFVRFLGEDLN 89
Query: 66 SYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLH 125
PPE+R + ++ QDYALFPH+TV +N+AFGL + Q +V+E+ K + +
Sbjct: 90 PLPPERRKVGFLFQDYALFPHLTVEENVAFGLV--EAAGQGRRERVRELLKRMELTPHAR 147
Query: 126 RKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSL 185
++P+ LSGGE+QRVA+ARAL P LLLLDEP LD++ + + ++ KE G T+L
Sbjct: 148 KRPQELSGGEQQRVALARALAPRPRLLLLDEPLGALDLRLREELLFFLRRTLKEEGVTTL 207
Query: 186 HVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENII 237
VTH EA L RV ++ GRLVQVG +EV++ P D ARFLG +N++
Sbjct: 208 LVTHDQGEAFLLAHRVALLREGRLVQVGRPEEVYARPKDPWAARFLGHKNLL 259
>pir||G81012 spermidine/putrescine ABC transporter, ATP-binding protein NMB2042
[imported] - Neisseria meningitidis (group B strain
MD58) >gi|7227304|gb|AAF42363.1| (AE002554)
spermidine/putrescine ABC transporter, ATP-binding
protein [Neisseria meningitidis MC58]
Length = 312
Score = 187 bits (469), Expect = 2e-46
Identities = 103/238 (43%), Positives = 147/238 (61%), Gaps = 5/238 (2%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
ML + + K + + D I V + + +LG SG GK+ LL IIAGI+ PD G I L
Sbjct: 1 MLELNGLCKRFGNKTVADNICLTVGRGKILAVLGRSGCGKSTLLNIIAGIVRPDGGEIWL 60
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
NG ++T PPEKR ++ + QDYALFPHM+ +N AFGLK++++ + E +R +G
Sbjct: 61 NGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQKMPKAEAERLAMAALAEVG 120
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKS--RFMTEMKVWR 177
+E+ HRKP LSGGEKQR+A+ARALV+ P LLLLDE F++LD + R MT ++
Sbjct: 121 LENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFSSLDTHLRGTLRRMTAERI-- 178
Query: 178 KELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
+ G ++ VTHS EEA + D + VM +GR++Q G + + P VAR +G N
Sbjct: 179 RNGGIPAVLVTHSPEEACTTADEIAVMHKGRILQYGTPETLVKTPSCVQVARLMGLPN 236
>pir||S76829 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1000120|gb|AAB41280.1| (U32936) orf 363
[Synechocystis PCC6803] >gi|1653830|dbj|BAA18741.1|
(D90916) ATP binding protein responsible for multiple
sugar import [Synechocystis sp.]
Length = 363
Score = 186 bits (468), Expect = 3e-46
Identities = 104/296 (35%), Positives = 178/296 (60%), Gaps = 17/296 (5%)
Query: 5 ESVSKDYKEF-KLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVD 63
E V+K + ++ + +++ +++ E + +GPSG GKT L ++AG+ +G+I +
Sbjct: 7 EQVTKQFDDYVAVNNLNLEIEDGEFLVFVGPSGCGKTTSLRLLAGLETVSQGQICIGDRR 66
Query: 64 VTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHL 123
V P+ R++A + Q YAL+PHM+VY+N+AF L L+ ++EI ++V +++LGIE L
Sbjct: 67 VNELSPKDRDIAMVFQSYALYPHMSVYENMAFSLDLQGKPKEEIRQRVCSAAELLGIEKL 126
Query: 124 LHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFT 183
LHRKP+ LSGG++QRVA+ RA+V +P + L+DEP +NLD + + E+ +L T
Sbjct: 127 LHRKPKELSGGQRQRVAVGRAIVRKPSVFLMDEPLSNLDAMLRVQARKEISKLHSDLATT 186
Query: 184 SLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI----IEG 239
++VTH EA+++GDR+ VM G L QV +++ P + VA F+G + +E
Sbjct: 187 FIYVTHDQVEAMTMGDRIAVMKDGILQQVDSPANLYNQPANLFVAGFIGSPAMNFFQVER 246
Query: 240 VAK--GNILEANGVKITLPISV----EGKVRIGVRPEDII------LSTEPVKTSA 283
+++ L +GV + +P SV + + +G+RPE+I L EP++ A
Sbjct: 247 LSQEGKEKLSLDGVVLPMPDSVAKNGDRPLTLGIRPENIYHPQYLPLEIEPMELPA 302
>gb|AAD32695.1|AF143949_1 (AF143949) glucose ABC transporter ATPase [Pseudomonas aeruginosa]
Length = 269
Score = 186 bits (468), Expect = 3e-46
Identities = 92/217 (42%), Positives = 145/217 (66%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLA 75
LRDI + E I++GPSG GK+ L+ IAG+ G I+++G D++ P+ R++A
Sbjct: 21 LRDIRLKIDSGEFLILVGPSGCGKSTLMNCIAGLESITGGAILVDGQDISGMSPKDRDIA 80
Query: 76 YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGE 135
+ Q YAL+P M+V +NIAFGLK+R++ + ID +V ++++L IEHLL RKP LSGG+
Sbjct: 81 MVFQSYALYPTMSVRENIAFGLKIRKMPQAAIDEEVARVARLLQIEHLLERKPSQLSGGQ 140
Query: 136 KQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAI 195
+QRVA+ RAL P++ L DE +NLD + + TE+K+ + L T+++VTH EA+
Sbjct: 141 QQRVAMGRALARRPKVYLFDEQLSNLDAKLRVEMRTELKLMHQRLKTTTVYVTHDQIEAM 200
Query: 196 SLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
+LGD+V VM G + Q G ++++++P + VA F+G
Sbjct: 201 TLGDKVAVMKDGVIQQFGTPQQIYNDPDNLFVASFIG 237
>gb|AAF70304.1|AF259974_1 (AF259974) MalK [Vibrio cholerae]
Length = 373
Score = 186 bits (468), Expect = 3e-46
Identities = 106/320 (33%), Positives = 185/320 (57%), Gaps = 19/320 (5%)
Query: 4 VESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+++V K Y + + +++ ++++ E + +GPSG GK+ LL IAG+ + G + +
Sbjct: 6 LKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDLYIGEQ 65
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
+ P KR + + Q YAL+PH+ +YDN++FGLKL + + EI ++V +++L + H
Sbjct: 66 RMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEILQLSH 125
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
LL R+P+ LSGG++QRVAI R LV +P + LLDEP +NLD + + +E+ +++LG
Sbjct: 126 LLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQRKLGC 185
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI------ 236
T ++VTH EA+++ D++ V+ G + QVG E++ P + VA F+G +
Sbjct: 186 TMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMNFMSVF 245
Query: 237 IEGVAKGNILEANGVKITLPISVEG-------KVRIGVRPEDIILSTEPVKTSARNEFRA 289
IEGV K + T I V+G ++ +G+RPE ++ E A+ E
Sbjct: 246 IEGVEKDRVQVQLSNGTTFWIPVDGTTVTRGERMSLGIRPEHLV---EAEHGDAKIE--G 300
Query: 290 EVIGIEELGPLVRVNLKIGG 309
+V+ +E+LG +V + + G
Sbjct: 301 KVMIVEKLGNETQVYMNLKG 320
>pir||A82398 maltose/maltodextrin ABC transporter, ATP-binding protein VCA0946
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9658383|gb|AAF96842.1| (AE004421)
maltose/maltodextrin ABC transporter, ATP-binding
protein [Vibrio cholerae]
Length = 373
Score = 186 bits (468), Expect = 3e-46
Identities = 106/320 (33%), Positives = 185/320 (57%), Gaps = 19/320 (5%)
Query: 4 VESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+++V K Y + + +++ ++++ E + +GPSG GK+ LL IAG+ + G + +
Sbjct: 6 LKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDLYIGEQ 65
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
+ P KR + + Q YAL+PH+ +YDN++FGLKL + + EI ++V +++L + H
Sbjct: 66 RMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEILQLSH 125
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
LL R+P+ LSGG++QRVAI R LV +P + LLDEP +NLD + + +E+ +++LG
Sbjct: 126 LLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQRKLGC 185
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI------ 236
T ++VTH EA+++ D++ V+ G + QVG E++ P + VA F+G +
Sbjct: 186 TMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMNFMSVF 245
Query: 237 IEGVAKGNILEANGVKITLPISVEG-------KVRIGVRPEDIILSTEPVKTSARNEFRA 289
IEGV K + T I V+G ++ +G+RPE ++ E A+ E
Sbjct: 246 IEGVEKDRVQVQLSNGTTFWIPVDGTTVTRGERMSLGIRPEHLV---EAEHGDAKIE--G 300
Query: 290 EVIGIEELGPLVRVNLKIGG 309
+V+ +E+LG +V + + G
Sbjct: 301 KVMIVEKLGNETQVYMNLKG 320
>gb|AAA23639.1| (M32101) cysA [Escherichia coli]
Length = 365
Score = 186 bits (467), Expect = 4e-46
Identities = 106/281 (37%), Positives = 159/281 (55%), Gaps = 7/281 (2%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ + ++ K + + L DIS D+ + +LGPSG+GKT LL IIAG+ G I +
Sbjct: 3 IEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFH 62
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKL----RRISRQEIDRKVKEISK 116
G DV+ R + ++ Q YALF HMTV+DNIAFGL + R + I KV ++ +
Sbjct: 63 GTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTKLLE 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ + HL R P +SGG+KQRVA+ARAL +EP++LLLDEPF LD Q + ++
Sbjct: 123 MVQLAHLADRYPAHVSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQL 182
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
+EL FTS+ VTH EEA + DRV VM +G + Q +V+ P V F+G N
Sbjct: 183 HEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQADAPDQVWREPATRFVLEFMGEVNR 242
Query: 237 IEGVAKGNILEANGVKITLPI--SVEGKVRIGVRPEDIILS 275
++G +G + L + +G V + +RP ++ +S
Sbjct: 243 LQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLRPWEVDIS 283
>dbj|BAA77930.1| (D83536) Hypothetical ABC transporter ATP-binding protein in
thrW-argF intergenic region. [Escherichia coli]
Length = 348
Score = 186 bits (467), Expect = 4e-46
Identities = 100/305 (32%), Positives = 175/305 (56%), Gaps = 9/305 (2%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
+I+ + + + +LGPSG GKT +L ++AG+ +P EG+I ++G DVT ++R++ +
Sbjct: 24 NINLTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMV 83
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
Q YALFPHM++ +N+ +GLK+ + R E+ +VKE ++ +E R +SGG++Q
Sbjct: 84 FQSYALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQ 143
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA RAL+++P++LL DEP +NLD + +++ +K+ TSL+VTH EA ++
Sbjct: 144 RVAWPRALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAFAV 203
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITLPI 257
D V VM +G ++Q+G ++++ P +A F+G N+ ++ G + P+
Sbjct: 204 SDTVLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPATFSDGYVDIYGYHLPRPL 263
Query: 258 --SVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGG--ITLK 313
+G+ +GVRPE I LS ++ R + + +GP V ++ G I L+
Sbjct: 264 HFGTQGEGMVGVRPEAITLSDRGEESQ-----RCVIRHVAYMGPQYEVTVEWHGQEILLQ 318
Query: 314 AFITR 318
TR
Sbjct: 319 VNATR 323
>pir||E75564 ABC transporter, ATP-binding protein - Deinococcus radiodurans
(strain R1) >gi|6457722|gb|AAF09652.1|AE001869_1
(AE001869) ABC transporter, ATP-binding protein
[Deinococcus radiodurans]
Length = 328
Score = 186 bits (467), Expect = 4e-46
Identities = 108/283 (38%), Positives = 162/283 (57%), Gaps = 14/283 (4%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
D+S +V+ E +LGPSG GK+ +L +AG+ PD G++++ G DVT+ PPE R+L +
Sbjct: 25 DVSLEVQAGETLALLGPSGCGKSTVLRSVAGLERPDAGQVLVGGRDVTALPPEARHLGLV 84
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
QDYALFPH++V DN+A+G + R SR + ++ +E ++G+ R P LSGG++Q
Sbjct: 85 FQDYALFPHLSVLDNVAYGPRRRGSSRPDAAQQAREALALVGLSEHERRLPAQLSGGQQQ 144
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ARAL LLLLDEP +NLD + +S +++ +LG L VTH EA++L
Sbjct: 145 RVALARALATRSPLLLLDEPLSNLDEKLRSELRHDLRGLFGQLGAGVLLVTHDQREALAL 204
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITLPI 257
RV VM G +VQ G ++F+ P VA FLG+ N+ + +G + +P
Sbjct: 205 AHRVAVMRAGHVVQEGAAADLFARPATAWVAEFLGWTNVFAHP------QVSGQALLVP- 257
Query: 258 SVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
E V++G E + V + R+E V LGPL
Sbjct: 258 --ESAVQLGAGGELL-----RVLSRQRSETGETVTLAHPLGPL 293
>pir||E69162 sulfate transport system ATP-binding - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2621547|gb|AAB84983.1| (AE000832) sulfate transport
system ATP-binding [Methanobacterium
thermoautotrophicum]
Length = 348
Score = 185 bits (466), Expect = 5e-46
Identities = 111/351 (31%), Positives = 200/351 (56%), Gaps = 16/351 (4%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++ + ++K Y + K L D++ V++ E I+GP+GAGK+ LL I+ + PD+G I+
Sbjct: 4 VIELSGITKSYGDIKVLEDVNLKVREGETLGIIGPTGAGKSTLLRIMDLLERPDDGEILF 63
Query: 60 NGVDVTSYPP--EKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKV 117
G +V P +R + + Q+ +F TV ++I +G ++R + + +VK++ +
Sbjct: 64 MGENVDDLKPLEVRRRMGMVFQNTPVF-RGTVAESILYGPRIR--GERPHESEVKDVLET 120
Query: 118 LGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWR 177
+G++ R+ LSGGE+QR+A+A+ L+ PE++LLDE ++LD ++SR M+
Sbjct: 121 MGLKGYGSRRTTELSGGERQRLALAQVLINRPEVVLLDEATSSLDPISRSR----MEDVI 176
Query: 178 KELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENII 237
EL T + TH + L DR+ ++ R ++Q G+ +E+F P VA F+G N++
Sbjct: 177 AELDVTVIFTTHDLLQGQKLADRIAILNRS-ILQTGEPREIFKKPASRFVAEFVGARNML 235
Query: 238 EG----VAKG-NILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVI 292
G A+G +++E +G+ I G V +RPEDI +S + +SA N+ V+
Sbjct: 236 RGRAHITAEGISLIECDGISIYSSERATGDVSATIRPEDITVSWQRTDSSALNQLEGRVL 295
Query: 293 GIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKV 343
+ + G + ++ ++ GG TL +T SL ++GI+ G V++ FK SA+ V
Sbjct: 296 AVRDAGSVQQLEVRCGGETLTVHMTGKSLNDMGITTGSRVWIEFKASAVHV 346
>gi|11467821 probable transport protein [Nephroselmis olivacea]
>gi|5880750|gb|AAD54843.1|AF137379_66 (AF137379)
probable transport protein [Nephroselmis olivacea]
Length = 343
Score = 185 bits (466), Expect = 5e-46
Identities = 101/293 (34%), Positives = 173/293 (58%), Gaps = 26/293 (8%)
Query: 4 VESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+E++SK + F+ D ++ +VK ++GPSG+GK+ LL +IAG+ DEG+I L G
Sbjct: 5 IENISKTFGTFRALDHVNLEVKAGSLVALVGPSGSGKSTLLRMIAGLERADEGKIWLAGR 64
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
D T P +KR++ ++ Q+YALF H+ V NI+FGL++R+ + +I +V+++ +++ +EH
Sbjct: 65 DATYAPIQKRHIGFVFQNYALFKHLNVAKNISFGLEVRQANPNQIRSRVRDLLQLIQLEH 124
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
+ R P LSGG++QRVA+ARAL +EP++LLLDEPF LD + + + ++ +E+
Sbjct: 125 MADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDARVRRELRSWLRDLHQEMPV 184
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI-IEGVA 241
T++ VTH +EA+ + + V +GRL QVG +E++ +P V F+G N ++ V
Sbjct: 185 TTVFVTHDQQEAMEVAHEIVVFNQGRLEQVGSPQEIYDHPATPFVMGFMGHINHGVDDVQ 244
Query: 242 KGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGI 294
+ + VRP D+I+ P + N +V+G+
Sbjct: 245 QSSYF--------------------VRPNDVIIQLVP----STNSLSGKVVGM 273
>gi|7524830 sulfate transport system permease protein [Chlorella vulgaris]
>gi|3023607|sp|P56344|CYSA_CHLVU PROBABLE SULFATE
TRANSPORT ATP-BINDING PROTEIN CYSA
>gi|7442559|pir||T07260 sulfate transport ATP-binding
protein - Chlorella vulgaris chloroplast
>gi|2224423|dbj|BAA57907.1| (AB001684) sulfate transport
system permease protein [Chlorella vulgaris]
Length = 236
Score = 185 bits (464), Expect = 8e-46
Identities = 87/232 (37%), Positives = 151/232 (64%), Gaps = 1/232 (0%)
Query: 4 VESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+E++SK + F+ D ++ ++K +LGPSG+GK+ LL ++AG+ +PD GRI L G
Sbjct: 5 IENISKRFGSFQALDRVNLEIKNGSLVGLLGPSGSGKSTLLRVLAGLEKPDSGRIWLEGQ 64
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
D T + R + ++ Q+YALFPH+TV +N+AFGL++++I ++V E+ K++ +E
Sbjct: 65 DATQMKLQDREIGFVFQNYALFPHLTVSENVAFGLEIQKIDSLLKKKRVNELLKLMQLEK 124
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
P LSGG++QRVA+ARAL +EP++LLLDEPFA LD + + + + ++ ++
Sbjct: 125 FGDSYPNQLSGGQRQRVALARALAMEPKVLLLDEPFAALDAKIRKQLRSWLRELHHKISV 184
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE 234
T++ VTH + EA+ L + ++ G+++Q+G +E+ +P + V FLG +
Sbjct: 185 TTVFVTHDYSEAMELAQEIVLLENGKIIQIGSAQELSDHPTNTFVTNFLGLK 236
>pir||E70943 probable ABC-type sugar transport protein - Mycobacterium
tuberculosis (strain H37RV) >gi|2896775|emb|CAA17252.1|
(AL021899) hypothetical protein Rv2038c [Mycobacterium
tuberculosis]
Length = 357
Score = 184 bits (463), Expect = 1e-45
Identities = 105/277 (37%), Positives = 167/277 (59%), Gaps = 13/277 (4%)
Query: 27 EHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYIPQDYALFPH 86
E +++GPSG GKT L ++AG+ D GRI + DVT P+ R++A + Q+YAL+PH
Sbjct: 32 EFVVLVGPSGCGKTTSLRMVAGLETLDCGRIRIGERDVTEVDPKDRDVAMVFQNYALYPH 91
Query: 87 MTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALV 146
MTV N+ F LK+ +I + EI +V +K+L ++ L RKP+ LSGG++QRVA+ RA+V
Sbjct: 92 MTVAQNMGFALKVAKIGKAEIRERVLAAAKLLDLQSYLDRKPKDLSGGQRQRVAMGRAIV 151
Query: 147 IEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLR 206
P++ L+DEP +NLD + + + ++ +++LG T+++VTH EA+++GDRV V+
Sbjct: 152 RRPQVFLMDEPLSNLDAKLRGQTRNQIAALQRQLGTTTVYVTHDQVEAMTMGDRVAVLSD 211
Query: 207 GRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIEGVAKGNILEANGVKITLPISVEG--- 261
G L Q +E++ NP + VA F+G N+ + + +I LP +V G
Sbjct: 212 GVLQQCASPRELYRNPGNVFVAGFIGSPAMNLFRLSIADSTVSLGDWQILLPRAVVGTAA 271
Query: 262 KVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELG 298
+V IGVRPE + L ++ +V +EELG
Sbjct: 272 EVIIGVRPEHLELGGAGIE--------MDVDMVEELG 300
>gi|11466697 mbpX [Marchantia polymorpha] >gi|126794|sp|P10091|CYSA_MARPO
PROBABLE SULFATE TRANSPORT ATP-BINDING PROTEIN CYSA
>gi|72461|pir||BVLVMX mbpX protein - liverwort
(Marchantia polymorpha) chloroplast
>gi|11666|emb|CAA28079.1| (X04465) mbpX [Marchantia
polymorpha]
Length = 370
Score = 184 bits (462), Expect = 1e-45
Identities = 99/230 (43%), Positives = 144/230 (62%), Gaps = 1/230 (0%)
Query: 4 VESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+ VSK K+ D +S V K +LGPSG+GK+ LL IIAG+ D G I L+G+
Sbjct: 5 IYKVSKSLGNLKILDRVSLYVPKFSLIALLGPSGSGKSSLLRIIAGLDNCDYGNIWLHGI 64
Query: 63 DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
DVT+ + R ++++ Q YALF HMTVY+NI+FGL+LR S Q+I KV ++ L I
Sbjct: 65 DVTNISTQYRRMSFVFQHYALFKHMTVYENISFGLRLRGFSAQKITNKVNDLLNCLRIAD 124
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
+ P LSGG+KQRVA+AR+L I+P+ LLLDEPF LD + + +K + ++
Sbjct: 125 ISFEYPAQLSGGQKQRVALARSLAIQPDFLLLDEPFGALDGELRRHLSKWLKRYLQDNKI 184
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
T++ VTH +EAIS+ D + ++ GRL+Q G K ++ P++ V FLG
Sbjct: 185 TTIMVTHDQKEAISMADEIVILKEGRLLQQGKPKNLYDQPINFFVGIFLG 234
>pir||E82302 iron(III) ABC transporter, ATP-binding protein VC0610 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655042|gb|AAF93776.1| (AE004146) iron(III) ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 343
Score = 184 bits (462), Expect = 1e-45
Identities = 125/353 (35%), Positives = 191/353 (53%), Gaps = 25/353 (7%)
Query: 2 LRVESVSKDYK-EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L +E+++ Y + L+ +S V E +LG SG GKT LL+ IAG++ G++ LN
Sbjct: 5 LLIENLTCQYDAQTVLKSLSLQVNPGEIVCLLGASGCGKTTLLKAIAGLLPLASGQLSLN 64
Query: 61 GVDVTS----YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
V + PPE+RN+ I QDYALFPH+TV N+ FGL ++E K+ E+
Sbjct: 65 CVTLDDGKRWLPPEQRNIGMIFQDYALFPHLTVAQNVGFGLDAMPAKQKEA--KIAEMLA 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ ++ R P LSGG++QRVAIARAL +P+LLLLDEPF+N+D Q + + E++
Sbjct: 123 LVHLDAFAERYPHQLSGGQQQRVAIARALAYKPDLLLLDEPFSNIDTQVRHELIIEIRKI 182
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
K+ G T++ VTHS EEA + D++ VM RG + Q G E++ P + VA FLG +
Sbjct: 183 FKQQGVTAIFVTHSREEAFAFADKMAVMNRGVIEQYGTAAELYYQPSSQFVADFLGGGSY 242
Query: 237 IEG--VAKGNILEANGVKITL---PISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEV 291
+ +++ A GV + PI+VE + ++ +RP+ V+ A E V
Sbjct: 243 LSAKRISETQYQTALGVVEAIARQPIAVEAECKLLLRPQQ-------VQIRAEEESSVTV 295
Query: 292 IGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
+ +G R + G L A T S +EL G+ V V+ T + F
Sbjct: 296 TEQQFMGDHCRYLIDAHGTQLIA--TSSQPLEL----GQAVSVNIDTQGVLAF 342
>pir||S63613 probable ATP-binding protein cymD - Klebsiella oxytoca
>gi|854231|emb|CAA60003.1| (X86014) cymD [Klebsiella
oxytoca]
Length = 376
Score = 183 bits (461), Expect = 2e-45
Identities = 121/365 (33%), Positives = 202/365 (55%), Gaps = 31/365 (8%)
Query: 4 VESVSKDYKE-FK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNG 61
+ + K Y+ FK + I ++ E + +GPSG K+ L +IAG+ + G I +
Sbjct: 6 LRKIEKRYENGFKAVHGIDLEIHDGEFMVFVGPSGCAKSTTLRMIAGLEDISGGEIYIGN 65
Query: 62 VDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIE 121
V PP+ R +A + Q+YAL+PH TV+DN+AFGLK+++ + EI R+V++ ++ L I
Sbjct: 66 RKVNDLPPKDRGIAMVFQNYALYPHKTVFDNMAFGLKMQKRPKDEIKRRVEDAAEKLEIT 125
Query: 122 HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWR---- 177
LL+RKP+ +SGG++QRVA+ RA+V +P++ L DEP +NLD K R MK+ +
Sbjct: 126 ELLYRKPKEMSGGQRQRVAVGRAIVRKPDVFLFDEPLSNLD--AKLRVSMRMKIAQLHRS 183
Query: 178 -KELGF--TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE 234
KE G T ++VTH EA++LGDR+ V+ G ++QV ++++ P ++ VA F+G
Sbjct: 184 LKEEGHPATMIYVTHDQTEALTLGDRICVLNHGNIMQVDTPTDLYNYPNNKFVASFIGSP 243
Query: 235 --NIIEGVAKGN-----ILEANGVKITLP----ISVEGKVR----IGVRPEDIILSTEPV 279
N+I+ + N + A GV+I +P + +EG + G+RPE I L+++
Sbjct: 244 SINLIDTAIRKNNERLYVEIAPGVEILIPHSKQVLLEGYINKPVCFGIRPEHISLASD-- 301
Query: 280 KTSARNEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTS 339
N F + +E +G + +GG L A + + I G+ + + T+
Sbjct: 302 -DDDLNTFEGVLTVVENMGSEKFLYFIVGGKELIARVDTQDINPFHI--GKTLRFNLNTA 358
Query: 340 AIKVF 344
VF
Sbjct: 359 FCHVF 363
>pir||H82440 ABC transporter, ATP-binding protein VCA0602 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9658013|gb|AAF96503.1| (AE004390) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 403
Score = 183 bits (459), Expect = 3e-45
Identities = 121/325 (37%), Positives = 180/325 (55%), Gaps = 20/325 (6%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L + V K + F L++IS ++K E LGPSG GKT LL IAG+ P G I N
Sbjct: 35 LDIRHVVKQFGSFTALKEISLSIEKGEFVCFLGPSGCGKTTLLRAIAGLDLPTSGTIHQN 94
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
+T PPE+R+ + Q YALFP++TV +NIA GL+ + +S ++ KV++ +++G+
Sbjct: 95 QQAITFLPPEQRDFGIVFQSYALFPNLTVEENIAIGLRNQGMSVRDALEKVEQWLEMIGL 154
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+ P LSGG++QRVA+ARAL + P LLLLDEP + LD + ++ E+ +++L
Sbjct: 155 ATSAQKYPSQLSGGQQQRVALARALALSPGLLLLDEPLSALDAKVRTHLREEICQLQRKL 214
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE-G 239
G T++ VTH EEA+++ DR+ VM G + QVG +E++ P VA F+G N I
Sbjct: 215 GITTIMVTHDQEEALTMADRIVVMNHGVIEQVGTPQEIYQKPASRFVAEFVGTMNFIPVS 274
Query: 240 VAKGNILEANGVKITLPISVEG-------KVRIGVRPEDIILST---EPVKTSARN---- 285
+A L I LP +E + + VRPE++ L T E + R+
Sbjct: 275 MASSQQLRIAESLIALP-KIENYTPCQGEQFDLAVRPENLELVTRYNEAIPVVIRHLEFL 333
Query: 286 --EFRAE-VIGIEELGPLVRVNLKI 307
+R E V E L P V V+L I
Sbjct: 334 GAFYRVECVFQGERLAPPVYVDLPI 358
>gb|AAG20071.1| (AE005086) spermidine/putrescine ABC transporter; PotA2
[Halobacterium sp. NRC-1]
Length = 374
Score = 182 bits (458), Expect = 4e-45
Identities = 116/328 (35%), Positives = 182/328 (55%), Gaps = 15/328 (4%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++R++ V K Y + + D++ +++ E F ++GPSG GKT L +I+G P EG I +
Sbjct: 24 LVRLDGVRKTYGDTTAVADLTLTLRRNELFTLVGPSGCGKTTTLRLISGFESPTEGTIRI 83
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGL-KLRRISRQEIDRKVKEISKVL 118
NG T PPE+R+ + Q +ALF HM+V +N+ +GL K + E+ R+V+ ++
Sbjct: 84 NGEPATGVPPERRDTNLVFQQHALFSHMSVAENVGYGLEKDPDVGADEVARRVESALDLV 143
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
+ R P LSGG++QRVA+ARALV EP +LLLDEP ++LD + + E++
Sbjct: 144 NLTESGERSPGALSGGQQQRVALARALVNEPAVLLLDEPLSSLDRTLRKQMQAELRRLSD 203
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
+ + +VTH E A+++ DR+GVM G LVQVG V+ NP VA F+G +++
Sbjct: 204 AVEGSFCYVTHDQELAMAVSDRIGVMRDGELVQVGTPAAVYRNPASPFVASFIGDTTLVD 263
Query: 239 G----VAKGNILEANGVKITLPISVE--GKVRIGVRPEDIILSTEPVKTSARNEFRAEVI 292
G A G G +T+P++ + G V +RPE + + + +A + F A V
Sbjct: 264 GTVEPAAGGAPTLTVGDWVTVPVATDATGTVTASIRPEMVARTDD---AAADHAFEAVVR 320
Query: 293 GIEELGPLVRVNL-KIG---GITLKAFI 316
G VR L +G G+TL A I
Sbjct: 321 ERTFQGEAVRYRLAPVGAAEGVTLAASI 348
>gb|AAF91339.1|AF249729_1 (AF249729) ATPase OpuCA [Listeria monocytogenes]
Length = 397
Score = 182 bits (457), Expect = 5e-45
Identities = 101/264 (38%), Positives = 154/264 (58%), Gaps = 7/264 (2%)
Query: 1 MLRVESVSKDYKEFK--LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
ML+ E V+K YK K + D++ ++ K E +GPSG GKT +++I +IEP EG+I
Sbjct: 1 MLKFEHVTKTYKGGKKAVNDLTLNIDKGEFVCFIGPSGCGKTTTMKMINRLIEPTEGKIF 60
Query: 59 LNGVDVTSYPPEK--RNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
+N D+ + P K R++ Y+ Q L PHMT+ +NI KL + S ++ + KE+ K
Sbjct: 61 INDKDIMAEDPVKLRRSIGYVIQQIGLMPHMTIRENIVLVPKLLKWSEEKKQERAKELIK 120
Query: 117 VLGI-EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ + E L R P LSGG++QR+ + RAL E L+L+DEPF LD T+ E K
Sbjct: 121 LVDLPEEFLDRYPYELSGGQQQRIGVLRALAAEQNLILMDEPFGALDPITRDSLQEEFKN 180
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
+KELG T + VTH +EAI L DR+ +M G +VQ E+ NP + V F+G +
Sbjct: 181 LQKELGKTIIFVTHDMDEAIKLADRIVIMKDGEIVQFDTPDEILRNPANSFVEDFIGKDR 240
Query: 236 IIEGVAKGNILEANGVKITLPISV 259
+IE AK ++ + + T P+S+
Sbjct: 241 LIE--AKPDVTQVAQIMNTNPVSI 262
>emb|CAB11328.1| (Z98604) ABC-type sugar transport protein [Mycobacterium leprae]
Length = 356
Score = 182 bits (456), Expect = 7e-45
Identities = 104/287 (36%), Positives = 171/287 (59%), Gaps = 17/287 (5%)
Query: 19 ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYIP 78
+ DV E +++GPSG GKT L ++AG+ D G I + DVT P+ R++A +
Sbjct: 24 LDLDVDDGEFVVVVGPSGCGKTTSLRMVAGLETLDSGCIRIGDRDVTHVDPKDRDVAMVF 83
Query: 79 QDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQR 138
Q+YAL+PHMTV N+ F LK+ +IS+ EI ++ ++K+L ++ L RKP+ LSGG++QR
Sbjct: 84 QNYALYPHMTVAQNLGFALKISKISKAEIHDRILVVAKLLDLQPYLDRKPKDLSGGQRQR 143
Query: 139 VAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLG 198
VA+ RA+V P++ L+DEP +NLD + +++ ++ + +LG T+++VTH EA+++G
Sbjct: 144 VAMGRAIVRRPQVFLMDEPLSNLDAKLRAQTRNQIAELQCQLGTTTVYVTHDQVEAMTMG 203
Query: 199 DRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITLPI- 257
DRV V+ G L Q +E++ P + VA F+G + + +I++++ + PI
Sbjct: 204 DRVAVLCYGVLQQFATPRELYHKPENVFVAGFIGSPGM--NLVTLSIVDSSVLLGDWPIR 261
Query: 258 ------SVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELG 298
S +V IGVRPE L + V+ E+ +EELG
Sbjct: 262 IPREIASAASEVIIGVRPEHFELGSLGVE--------VEIDMVEELG 300
>pir||T03479 probable ABC transporter ATP-binding protein - Rhodobacter
capsulatus >gi|3128280|gb|AAC16132.1| (AF010496)
hypothetical ABC transporter ATP-binding protein
[Rhodobacter capsulatus]
Length = 358
Score = 182 bits (456), Expect = 7e-45
Identities = 115/318 (36%), Positives = 173/318 (54%), Gaps = 12/318 (3%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
LR++ VS+ + L +ISF++ + E +LG SG GK+ LL +IAG+ PD G I+L
Sbjct: 12 LRLDRVSRRFGAVTALAEISFNLGQGEILCLLGASGCGKSTLLRLIAGVERPDSGEIVLA 71
Query: 61 GVDVTS----YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
G + PE R + ++ QDYALFPH++V +N+AFGL R E+ +V E+
Sbjct: 72 GRVLAGPGRFVDPEARGIGFMFQDYALFPHLSVAENVAFGL--RGAPSAELKARVAEVLA 129
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
V G+ L R P LSGGE QRVA+ARAL P LLL+DEPF+NLD + E
Sbjct: 130 VAGVSALADRYPHQLSGGESQRVALARALAPRPGLLLMDEPFSNLDQGLRDSVRAETLAL 189
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
+++G ++ VTH EA+++ D + VM G++ + D + ++ P ARFLG +
Sbjct: 190 LRQIGVAAILVTHDPAEALAVADHLAVMQAGKIEALADPRSLYHAPPTLYAARFLGPGST 249
Query: 237 IEGVAKGNILEANGVKITLPISVEGKVRIG-VRPEDIILSTEPVKTSARNEFRAEVIGIE 295
+ G G L + P EG+ + RP+ + L AR E RAE +G +
Sbjct: 250 LPGQVAGGALVTPLGRFAAPGLAEGQAAVAFFRPQALALCDPAAGAPARIE-RAEFLGAQ 308
Query: 296 ELGPLVRVNLKIGGITLK 313
E + + L+ GG+ L+
Sbjct: 309 E---RLVLRLEAGGVELR 323
>pir||H82727 sugar ABC transporter ATP-binding protein XF1067 [imported] -
Xylella fastidiosa (strain 9a5c)
>gi|9106014|gb|AAF83877.1|AE003943_8 (AE003943) sugar
ABC transporter ATP-binding protein [Xylella fastidiosa]
Length = 364
Score = 182 bits (456), Expect = 7e-45
Identities = 112/341 (32%), Positives = 186/341 (53%), Gaps = 19/341 (5%)
Query: 2 LRVESVSKDYK--EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+++E++ K Y + + +SF+V E +++GPSG GK+ LL +IAG+ + G + +
Sbjct: 4 VQLEAIRKVYDNGQVVVPGVSFEVADGELMVLVGPSGCGKSTLLRMIAGLEDISSGTLRI 63
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
V PP+ RN+A + Q YAL+PHMT +N+AFGLKLR S + I ++K ++++LG
Sbjct: 64 GERVVNDVPPKDRNVAMVFQSYALYPHMTAAENLAFGLKLRGYSTEAIAERIKNVAEMLG 123
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
+ LL P+ +SGG++QRVA+ RA+V E + LLDEP +NLD + ++ +++ ++
Sbjct: 124 LTSLLDTLPKAMSGGQRQRVALGRAMVRESAVFLLDEPLSNLDAKLRNSVRSDITRLHRK 183
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG------F 233
LG T ++VTH EA++LG R+ ++ G + Q+ ++ +P + VA FLG
Sbjct: 184 LGTTMIYVTHDQVEAMTLGHRIVLLKDGVIQQIDTPMVLYDHPANLFVAGFLGNPAMNML 243
Query: 234 ENIIEGVAKGNILEANGVKITLPISVEGK-------VRIGVRPEDIILSTEPVKTSARNE 286
+E VA G L + + + K V +GVRPE I P
Sbjct: 244 PGRLEAVAGGMELHLESGECVMFVGAIPKSVWFGRDVVLGVRPEHI----RPAGLGEPVA 299
Query: 287 FRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGIS 327
A V +E +G V ++L+ G + L + L +G S
Sbjct: 300 LEATVEALEPVGNEVFLHLRCGALALTLRVPPQELPGIGES 340
>sp|Q01937|LACK_AGRRD LACTOSE TRANSPORT ATP-BINDING PROTEIN LACK >gi|420867|pir||S34734
ATP-binding protein lacK - Agrobacterium radiobacter
Length = 363
Score = 181 bits (455), Expect = 9e-45
Identities = 105/316 (33%), Positives = 173/316 (54%), Gaps = 27/316 (8%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R+ + K Y + ++ ++ +V E + +GPSG GK+ LL +IAG+ + G + +
Sbjct: 4 VRLTDIRKSYGSLEVIKGVNLEVSSGEFVVFVGPSGCGKSTLLRMIAGLEDISSGELTIG 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G + P KR +A + Q YAL+PHMTV +N+ F L+ +++ EI+R+V +K+L +
Sbjct: 64 GTVMNDVDPSKRGIAMVFQTYALYPHMTVRENMGFALRFAGMAKDEIERRVNAAAKILEL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+ L+ RKP+ LSGG++QRVAI RA+V +P++ L DEP +NLD + + E+ KEL
Sbjct: 124 DALMDRKPKALSGGQRQRVAIGRAIVRQPDVFLFDEPLSNLDAELRVHMRVEIARLHKEL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NIIE 238
T ++VTH EA++L D++ VM G + QVG ++ +P + VA F+G N +
Sbjct: 184 NATIVYVTHDQVEAMTLADKIVVMRGGIVEQVGAPLALYDDPDNMFVAGFIGSPRMNFLP 243
Query: 239 GVAKGNILEANGVKITLPISVE----------------GKVRIGVRPEDIILSTEPVKTS 282
V G +A G ++T+ + V +GVRPE + + S
Sbjct: 244 AVVIG---QAEGGQVTVALKARPDTQLTVACATPPQGGDAVTVGVRPEHFLPA-----GS 295
Query: 283 ARNEFRAEVIGIEELG 298
+ A V +E LG
Sbjct: 296 GDTQLTAHVDVVEHLG 311
>pir||S05329 inner membrane protein malK - Salmonella typhimurium
Length = 369
Score = 180 bits (453), Expect = 2e-44
Identities = 101/307 (32%), Positives = 168/307 (53%), Gaps = 18/307 (5%)
Query: 17 RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAY 76
+DI+ D+ E + +GPSG GK+ LL +IAG+ G + + + PP +R +
Sbjct: 20 KDINLDIHDGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGETRMNDIPPAERGVGM 79
Query: 77 IPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEK 136
+ Q YAL+PH++V +N++F + ++ ++++V ++++VL + HLL RKP+ LSGG++
Sbjct: 80 VFQSYALYPHLSVAENMSFRPQAAGAKKEVMNQRVNQVAEVLQLAHLLERKPKALSGGQR 139
Query: 137 QRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAIS 196
Q VAI R LV EP + LLDEP +NLD + + E+ K LG T ++VTH EA++
Sbjct: 140 QAVAIGRTLVAEPRVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMT 199
Query: 197 LGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILEANGVKITLP 256
L D++ V+ GR+ QVG E++ P D VA F+G + K V++ LP
Sbjct: 200 LADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIEQVQVELP 259
Query: 257 -------------ISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRV 303
+ V + +G+RPE ++ S A EV +E+LG ++
Sbjct: 260 NRQQIWLPVESRGVQVGANMSLGIRPEHLLPS-----DIADVTLEGEVQVVEQLGHETQI 314
Query: 304 NLKIGGI 310
+++I I
Sbjct: 315 HIQIPAI 321
>gi|11498586 osmoprotection protein (proV) [Archaeoglobus fulgidus]
>gi|7428829|pir||E69372 osmoprotection protein (proV)
homolog - Archaeoglobus fulgidus
>gi|2649615|gb|AAB90260.1| (AE001036) osmoprotection
protein (proV) [Archaeoglobus fulgidus]
Length = 361
Score = 180 bits (451), Expect = 3e-44
Identities = 97/233 (41%), Positives = 144/233 (61%), Gaps = 4/233 (1%)
Query: 4 VESVSKDYKEF-KLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV 62
+E+VSK Y F +R+++ V+ E ++GPSG+GKT L +I ++EPDEGR+++NG
Sbjct: 11 LENVSKRYGNFFAVRELNLTVEGGELLALIGPSGSGKTTTLRMINRLVEPDEGRVLINGQ 70
Query: 63 DVTSYPPEK--RNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
D++ + RN+ Y+ Q LFPHM V++NI KL ++I ++V E+ K++ +
Sbjct: 71 DISEIDAVRLRRNIGYVIQQIGLFPHMKVWENIGLIPKLEGWEEEKIRQRVDELLKLVDL 130
Query: 121 E-HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
R P LSGG++QRV +ARAL + P LLL+DEPF LD + + E ++E
Sbjct: 131 PIEFAERYPWQLSGGQQQRVGLARALALNPPLLLMDEPFGALDPILRKQLQEEFARIKEE 190
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
LG T + VTH EEA LGDR+ +M GRLVQVG+ +E+ NP +E V G
Sbjct: 191 LGKTIVFVTHDVEEAFRLGDRIAIMNEGRLVQVGEPEELIINPANEFVEDITG 243
>sp|Q9Z3R9|AGLK_RHIME ALPHA-GLUCOSIDES TRANSPORT ATP-BINDING PROTEIN AGLK
>gi|4210903|gb|AAD12046.1| (AF045609) AglK
[Sinorhizobium meliloti]
Length = 363
Score = 179 bits (449), Expect = 5e-44
Identities = 108/286 (37%), Positives = 163/286 (56%), Gaps = 15/286 (5%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L ++ + K Y + I D+K+ E + +GPSG GK+ LL +IAG+ E G + ++
Sbjct: 4 LLLKDIRKSYGAVDVIHGIDLDIKEGEFVVFVGPSGCGKSTLLRMIAGLEEITGGDMFID 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G V PP KR +A + Q YAL+PHMTVYDN+AFG+++ R S++EIDR+V+ + +L +
Sbjct: 64 GERVNDVPPSKRGIAMVFQSYALYPHMTVYDNMAFGMRIARESKEEIDRRVRGAADMLQL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
L R P+ LSGG++QRVAI RA+ P++ L DEP +NLD + E + ++ +
Sbjct: 124 TPYLDRLPKALSGGQRQRVAIGRAICRNPKVFLFDEPLSNLDAALRVATAIENRQAQRAM 183
Query: 181 GFTS-LHVTHSFEEAISLGDRVGVM-LRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NI 236
T+ ++VTH EA++L DR+ V R Q G E++ P + VARF+G N+
Sbjct: 184 SNTTMIYVTHDQVEAMTLADRIVVFSRRSTFEQFGAPFELYERPANFFVARFIGSPPMNV 243
Query: 237 IEGVAKGN-----ILEANGVKITLPI----SVEGK-VRIGVRPEDI 272
I + A G +TL + S GK GVRPED+
Sbjct: 244 IPATITATGQQTAVSLAGGKSVTLDVPTNASENGKTASFGVRPEDL 289
>emb|CAA67415.1| (X98917) orf4 [Methanopyrus kandleri]
Length = 228
Score = 178 bits (448), Expect = 6e-44
Identities = 94/218 (43%), Positives = 141/218 (64%), Gaps = 5/218 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
MLRVE V Y + + LR + +V+ E ++ GP+G+GK+ LL+I+AGI+ PDEGR+I+
Sbjct: 1 MLRVEGVKFSYGDREVLRGVDLEVEPGEVRVLFGPNGSGKSTLLKIVAGILRPDEGRVII 60
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
DVT PPE+R++ Y+PQ ALFPHMTV DNI + L+ R +D E+ ++LG
Sbjct: 61 GEEDVTDLPPEERHVGYVPQQPALFPHMTVEDNITYSLQNGRGDPDRLD----ELVELLG 116
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
++ L RKP LSGG + RV++ARAL +P+++LLDEP +++D+ K+ + + KE
Sbjct: 117 LKEHLDRKPDELSGGYQSRVSLARALFSDPKVMLLDEPLSDVDLAVKAGLVPRFREVLKE 176
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKE 217
G +L+VTH EA +GD V++ G+ V V V E
Sbjct: 177 TGIPALYVTHDPWEAERIGDSFTVLIGGKAVDVNSVDE 214
>pir||T36641 probable ABC-type transport system ATP-binding chain - Streptomyces
coelicolor >gi|5019356|emb|CAB44409.1| (AL078610)
putative ABC transporter ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 374
Score = 178 bits (447), Expect = 8e-44
Identities = 109/324 (33%), Positives = 171/324 (52%), Gaps = 4/324 (1%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNLAYI 77
D++ + +LGP+GAGKT L +AG++ +G + L+G ++ PPE R + +
Sbjct: 46 DVALTAAPGDVVALLGPNGAGKTTALRALAGLVPLSDGHLRLDGAELDRTPPESRPVGVV 105
Query: 78 PQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQ 137
QDY LFPH+T DN+AFG + R ++ + + + LG+ KPR LSGG+ Q
Sbjct: 106 FQDYLLFPHLTALDNVAFGPRCRGATKAQARTQAAAWLERLGLAGHAAAKPRRLSGGQAQ 165
Query: 138 RVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISL 197
RVA+ARAL P LLLLDEP A LD +T+ +++ + ++ VTH +A+ L
Sbjct: 166 RVALARALATRPRLLLLDEPLAALDARTRLDVRAQLRRHLADFEAVAVLVTHDPLDAMVL 225
Query: 198 GDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNILE-ANGVKITLP 256
D + V+ G +VQ G + P + +A +G N+ G A+G+ + G IT
Sbjct: 226 ADHLVVVEDGHVVQEGTPSHIARRPRTDYIAHLVGL-NLYRGRAEGHTVRLEGGPAITTT 284
Query: 257 ISVEGKVRIGVRPEDIILSTE-PVKTSARNEFRAEVIGIEELGPLVRVNLKIGGITLKAF 315
+ G + P + L E P +SARN +R EV G+E G +R +L G + L A
Sbjct: 285 EELTGPAFVAFPPSAVTLHRERPTGSSARNVWRCEVAGLETHGDQIRADL-TGDLPLAAD 343
Query: 316 ITRSSLIELGISEGREVYVSFKTS 339
+T + EL + G V+ + K +
Sbjct: 344 LTTLAAAELDLHPGATVWAAVKAT 367
>gi|10955064 motB [Agrobacterium tumefaciens] >gi|3064078|gb|AAC18650.1|
(AF242881) motB [Agrobacterium tumefaciens]
Length = 394
Score = 177 bits (445), Expect = 1e-43
Identities = 100/285 (35%), Positives = 166/285 (58%), Gaps = 4/285 (1%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ + V+K Y K L DI+ ++ E +LGPSG+GKT LL +AG I PD G +
Sbjct: 44 ISIAGVTKSYGPVKVLSDINLHIRSGEFMTLLGPSGSGKTTLLMTLAGFIRPDFGSLKFG 103
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
+V P R + + Q+YALFPHM+V NIA+ LK+R R+ I +V+++ + + +
Sbjct: 104 EEEVILRAPHLRGVGMMFQNYALFPHMSVEANIAYPLKIRGEDRETIKARVRDVLETVQL 163
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
R+ LSGG++QR+A+ARA+V +P++LL+DEP + LD + E++ ++L
Sbjct: 164 GGYGSRRISELSGGQRQRIALARAIVFKPKILLMDEPLSALDKNLRELMQLELRTMHEQL 223
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G T++ VTH EA+++ DR+ V+ G++ Q+ + ++S P E VA F+G + +
Sbjct: 224 GMTTVLVTHDQREALTMSDRIAVLRNGKIAQIDTSETLYSEPNSEFVAAFMGESSFLTVE 283
Query: 241 AKGNILEANGVKI-TLPISVEGKVR--IGVRPEDIILSTEPVKTS 282
G +G K+ T ++VEG R + +RPE + TE ++S
Sbjct: 284 HDGASFCFHGRKLATESVTVEGARRHLLVLRPEKLDFITERERSS 328
>gb|AAB59057.1| (J01648) malK [Escherichia coli]
Length = 370
Score = 176 bits (442), Expect = 3e-43
Identities = 108/324 (33%), Positives = 181/324 (55%), Gaps = 20/324 (6%)
Query: 2 LRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+++++V+K + E + +DI+ D+ + E + +GPSG GK+ LL +IAG+ G + +
Sbjct: 4 VQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIG 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
+ PP +R + + Q YAL+PH++V +N++FGLK ++ I+++V ++++VL +
Sbjct: 64 EKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKPAGAKKEVINQRVNQVAEVLQL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
HLL RKP+ LSGG++QRVAI R LV EP + LLDEP +NLD + + E+ K L
Sbjct: 124 AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL 183
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEV--FSNPVDEGVARFLGFENIIE 238
G T ++VTH EA++L D++ V+ GR+ QVG V P + RF E +
Sbjct: 184 GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLAVPLSGRPFCRRIYRFAKDELLPV 243
Query: 239 GVAKGNILEA-------NGVKITLP-----ISVEGKVRIGVRPEDIILSTEPVKTSARNE 286
V I + N ++ LP + V + +G+RPE ++ S A
Sbjct: 244 KVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPS-----DIADVI 298
Query: 287 FRAEVIGIEELGPLVRVNLKIGGI 310
EV +E+LG +++++I I
Sbjct: 299 LEGEVQVVEQLGNETQIHIQIPSI 322
>sp|O34992|OPCA_BACSU GLYCINE BETAINE/CARNITINE/CHOLINE TRANSPORT ATP-BINDING PROTEIN
OPUCA >gi|7442620|pir||C69670 glycine
betaine/carnitine/choline ABC transporter (ATP-bindin)
opuCA - Bacillus subtilis >gi|2271389|gb|AAB63768.1|
(AF009352) ATPase [Bacillus subtilis]
>gi|2635896|emb|CAB15388.1| (Z99121) glycine
betaine/carnitine/choline ABC transporter (ATP-binding
protein) [Bacillus subtilis]
Length = 380
Score = 176 bits (441), Expect = 4e-43
Identities = 94/243 (38%), Positives = 141/243 (57%), Gaps = 5/243 (2%)
Query: 1 MLRVESVSKDYKEFK--LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
ML++E VSK YK K + I D+ K E +GPSG GKT +++I +IEP GRI
Sbjct: 1 MLKLEQVSKVYKGGKKAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINRLIEPSSGRIF 60
Query: 59 LNGVDVTSYPPE--KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
++G ++ P +R + Y+ Q LFPHMT+ NI+ KL + ++ + +E+ K
Sbjct: 61 IDGENIMEQDPVELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEEKRKERARELLK 120
Query: 117 VLGI-EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ + L R P LSGG++QR+ + RAL EP L+L+DEPF LD T+ E K
Sbjct: 121 LVDMGPEYLDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKK 180
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
++ L T + VTH +EAI L DR+ ++ G +VQVG E+ NP +E V F+G E
Sbjct: 181 LQRTLNKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDEILRNPANEFVEEFIGKER 240
Query: 236 IIE 238
+I+
Sbjct: 241 LIQ 243
>dbj|BAB07815.1| (AB036417) CysA protein [Acetabularia acetabulum]
Length = 357
Score = 176 bits (441), Expect = 4e-43
Identities = 113/325 (34%), Positives = 178/325 (54%), Gaps = 22/325 (6%)
Query: 2 LRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGR 56
++++ + K YK K + + ++ E +LGPSG+GKT LL ++AG+ E EG+
Sbjct: 8 VKLQGIVKHYKTRKGIFKAVNGVDLEINSGEIVALLGPSGSGKTTLLRVMAGLEEITEGK 67
Query: 57 IILNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
I +G D T + E R + ++ Q YALF H+TV DNIAFG +++++ +I ++VKE+
Sbjct: 68 IFYDGEDATDWSLEDRQIGFVFQGYALFKHLTVGDNIAFGPRMKKMDI-DIRKRVKELLD 126
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++ + L R P+ LSGG++QR+A+ARAL EP LLLLDEPF LD + + +K
Sbjct: 127 LVQLPGLESRFPQQLSGGQRQRIALARALAYEPRLLLLDEPFGALDPEIREDLRNSLKRI 186
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
L TS+ VTH EEA + DRV V +G + QVG +++++ NP V F+G N
Sbjct: 187 ISSLNLTSVMVTHDQEEAFEVADRVVVFNKGSIEQVGSLEDIYRNPQTAFVMDFVGEANH 246
Query: 237 IEGVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSAR--NEFRAEVIGI 294
I + A +K + K +I RP +I EP +T + A+V
Sbjct: 247 I----PSRCVFAKRMKF-----ISNKPQIMFRPTEI----EPYETFREDISVCPAQVTYK 293
Query: 295 EELGPLVRVNLKI-GGITLKAFITR 318
+GP + LK G+ ++ + R
Sbjct: 294 CPVGPWTKYQLKFDDGVEIEMILDR 318
>sp|Q45460|OPBA_BACSU CHOLINE TRANSPORT ATP-BINDING PROTEIN OPUBA >gi|7442619|pir||G69669
choline ABC transporter (ATP-binding protein) opuBA -
Bacillus subtilis >gi|2293447|gb|AAC14356.1| (AF008930)
ATPase [Bacillus subtilis] >gi|2635886|emb|CAB15378.1|
(Z99121) choline ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 381
Score = 175 bits (438), Expect = 9e-43
Identities = 94/264 (35%), Positives = 152/264 (56%), Gaps = 6/264 (2%)
Query: 1 MLRVESVSKDYKEFK--LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
ML +E+VSK YK K + +++ + K E +GPSG GKT +++I +IEP G+I
Sbjct: 1 MLTLENVSKTYKGGKKAVNNVNLKIAKGEFICFIGPSGCGKTTTMKMINRLIEPSAGKIF 60
Query: 59 LNGVDVTSYPPE--KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
++G ++ P +R + Y+ Q LFPHMT+ NI+ KL + Q+ + +E+ K
Sbjct: 61 IDGENIMDQDPVELRRKIGYVIQQIGLFPHMTIQQNISLVPKLLKWPEQQRKERARELLK 120
Query: 117 VLGI-EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ + + R P LSGG++QR+ + RAL EP L+L+DEPF LD T+ E K
Sbjct: 121 LVDMGPEYVDRYPHELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRDSLQEEFKK 180
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
+K L T + VTH +EAI L DR+ ++ G +VQVG ++ NP DE V F+G E
Sbjct: 181 LQKTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGTPDDILRNPADEFVEEFIGKER 240
Query: 236 IIEGVAKGNILEANGVKITLPISV 259
+I+ + ++ + + T P+++
Sbjct: 241 LIQS-SSPDVERVDQIMNTQPVTI 263
>pir||T47062 hypothetical protein [imported] - Yersinia pestis
>gi|4106650|emb|CAA21405.1| (AL031866) ORF80, len=296
aa, 59.6% identity in 265 aa overlap with MalK E. coli
(371 aa), Fasta scores: opt: 1024, E(): 0 [Yersinia
pestis]
Length = 296
Score = 174 bits (436), Expect = 2e-42
Identities = 91/239 (38%), Positives = 142/239 (59%), Gaps = 8/239 (3%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+R+ +V K + + + + + ++K E + +GPSG GK+ LL +IAG+ G I +
Sbjct: 4 IRLSNVFKRFHDTQVINQVDLEIKNGEFCVFIGPSGCGKSTLLRMIAGLETISSGEISIG 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
V P R +A + Q YAL+PHMT+YDN+AF LKL + EI+R+V +K+L +
Sbjct: 64 DKVVNKLAPADRGVAMVFQSYALYPHMTIYDNMAFNLKLAKTEPAEIERRVLNAAKILQL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E LL R P+ LSGG++QRVAI RA+V P++ L DEP +NLD + E+ +L
Sbjct: 124 ELLLQRLPKALSGGQRQRVAIGRAIVRNPDVFLFDEPLSNLDASLRVATRVEIAKLHHQL 183
Query: 181 GFTSLHVTHSFEEAISLGDRV-------GVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
G T ++VTH EA++L D++ ++ G + Q G E++ +PV+E VA F+G
Sbjct: 184 GNTMVYVTHDQVEAMTLADKIVLLNSGAAMLNEGSIAQTGHPLELYHHPVNEFVAGFIG 242
>sp|Q57293|AFUC_ACTPL FERRIC TRANSPORT ATP-BINDING PROTEIN AFUC
>gi|1469284|gb|AAB05030.1| (U05042) afuC gene product
[Actinobacillus pleuropneumoniae]
>gi|1477453|gb|AAB17216.1| (U04954) afuC [Actinobacillus
pleuropneumoniae]
Length = 348
Score = 173 bits (435), Expect = 2e-42
Identities = 97/296 (32%), Positives = 171/296 (57%), Gaps = 7/296 (2%)
Query: 2 LRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L +++++K + K + ++ +K+ +LGPSG GKT +L ++AG+ P G+I ++
Sbjct: 6 LVLKNITKSFGKATVIDNLDLVIKRGTMVTLLGPSGCGKTTVLRLVAGLENPTSGQIFID 65
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G DVT + R++ + Q YALFPHM++ DN+ +GL+++ +S +E ++VKE +++ +
Sbjct: 66 GEDVTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGLRMQGVSNEERKQRVKEALELVDL 125
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
R +SGG++QRVA+ARALV++P++L+LDEP +NLD + +++ ++ L
Sbjct: 126 AGFADRFVDQISGGQQQRVALARALVLKPKVLILDEPLSNLDANLRRSMREKIRELQQRL 185
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G TSL+VTH EA ++ D V VM +G ++Q K + + + F+G I +G
Sbjct: 186 GITSLYVTHDQTEAFAVSDEVIVMNKGTIMQKARQKIFIYDRILYSLRNFMGESTICDGN 245
Query: 241 AKGNILEANGVKITLPIS-----VEGKVRIGVRPEDIILSTEPVKTSARNEFRAEV 291
+ + L + +G +GVRPE I L T +TS R + ++ V
Sbjct: 246 LNQGTVSIGDYRFPLHNAADFSVADGACLVGVRPEAIRL-TATGETSQRCQIKSAV 300
>gb|AAF64239.1|AF249736_3 (AF249736) ABC transporter [Pseudomonas putida]
Length = 282
Score = 172 bits (432), Expect = 5e-42
Identities = 91/235 (38%), Positives = 143/235 (60%), Gaps = 3/235 (1%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
++V ++ K + F L D+S D+ E +LGPSG GKT LL IAG+ D G + +
Sbjct: 10 MKVRNIHKRFGAFTALNDVSLDIAAGELVCLLGPSGCGKTTLLRCIAGLERQDRGTLYIG 69
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
D++ PP+ R+ + Q YALFP++TV NIA+GL R++ ++V E+ +++G+
Sbjct: 70 ERDISELPPQARDYGILFQSYALFPNLTVEANIAYGLT--GSGREQARQRVTEMLELVGL 127
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
+ P LSGG++QRVA+ARAL P LLLLDEP + LD + + TE++ +++L
Sbjct: 128 AGSEKKYPGQLSGGQQQRVALARALAPSPSLLLLDEPMSALDARVREHLCTELRQLQRQL 187
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
G T+L VTH+ +EA+ + DR+ VM G++ Q +E++ P VA F+G N
Sbjct: 188 GITTLMVTHNQDEAMLMADRIAVMNNGQVEQYATPQEIYDQPATPFVAEFVGQGN 242
>pir||T10888 iron utilization protein C - Haemophilus influenzae
>gi|619400|gb|AAB32112.1| (S72674) HitC=iron utilization
protein [Haemophilus influenzae, type b, DL42, NTHI
TN106, Peptide, 356 aa]
Length = 356
Score = 172 bits (431), Expect = 6e-42
Identities = 115/349 (32%), Positives = 191/349 (53%), Gaps = 20/349 (5%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L V++++K + E + L DISF +++ E +LG SG GKT LL IAG +P G I L
Sbjct: 11 LLTVKNLNKFFNEQQVLHDISFSLQRGEILFLLGASGCGKTTLLRAIAGFEQPSNGEIWL 70
Query: 60 NGVDVT----SYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEIS 115
+ + P ++R+L Y+ Q+ LFPH+ VY NIA+GL + E ++++I
Sbjct: 71 KERLIFGENFNLPTQQRHLGYVVQEGILFPHLNVYRNIAYGLGNGKGKNSEEKTRIEQIM 130
Query: 116 KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ GI L R P LSGG++QRVA+ARAL PEL+LLDEPF+ LD + + EM
Sbjct: 131 QLTGIFELADRFPHQLSGGQQQRVALARALAPNPELILLDEPFSALDEHLRQQIRQEMLQ 190
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
++ G +++ VTH +EA+ D++ ++ +G+++Q+ + ++ +P A+F+G E+
Sbjct: 191 ALRQSGASAIFVTHDRDEALRYADKIAIIQQGKILQIDTPRTLYWSPNHLETAKFMG-ES 249
Query: 236 IIEGVAKGNILEANGVKITL---PIS----VEGKVRIGVRPEDIILSTEPVKTSARNEFR 288
I V N+L+ N + L PI + + RI +RPE L +A F
Sbjct: 250 I---VLPANLLDENTAQCQLGNIPIKNKSISQNQGRILLRPEQFSLFKTSENPTAL--FN 304
Query: 289 AEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFK 337
++ IE G + + ++I G + +I +L I + VY+ K
Sbjct: 305 GQIKQIEFKGKITSIQIEINGYAI--WIENVISPDLSIGDNLPVYLHKK 351
>gb|AAG19353.1| (AE005030) spermidine/putrescine ABC transporter ATP-binding; PotA1
[Halobacterium sp. NRC-1]
Length = 377
Score = 172 bits (431), Expect = 6e-42
Identities = 99/237 (41%), Positives = 145/237 (60%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L ++ V+K+Y E +RD+S V++ E +LGPSG GKT L ++AG+ P G I L
Sbjct: 26 VLELDGVTKEYGAETAVRDLSLSVREGELLTLLGPSGCGKTTTLRMLAGLERPTGGTIEL 85
Query: 60 NGVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEIS 115
+ V T E R + + QD+ALFPH++V +N+AFGL R +V E+
Sbjct: 86 DAQRVAGPDTFVAAEDREIGIVFQDFALFPHLSVAENVAFGLTDR--DEDATAARVDEML 143
Query: 116 KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ + + R LSGG++QRVA+AR+L EP++LLLDEPF+NLDV+ + E++
Sbjct: 144 ALVDMPEMGDRSVDQLSGGQQQRVAVARSLAPEPDILLLDEPFSNLDVRLRVEMREEVRR 203
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
KE G T++ VTH EEA+S+ DRV V+ G + QVGD + VF +P VA FLG
Sbjct: 204 ILKEAGVTAVSVTHDQEEALSISDRVAVLNDGCIEQVGDPEGVFEHPESRFVASFLG 260
>sp|P44513|HITC_HAEIN IRON(III)-TRANSPORT ATP-BINDING PROTEIN HITC
>gi|1075080|pir||E64048 nucleotide-binding protein sfuC
homolog - Haemophilus influenzae (strain Rd KW20)
Length = 356
Score = 171 bits (429), Expect = 1e-41
Identities = 114/349 (32%), Positives = 191/349 (54%), Gaps = 20/349 (5%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L V++++K + E + L DISF +++ E +LG SG GKT LL IAG +P G I L
Sbjct: 11 LLTVKNLNKFFNEQQVLHDISFSLQRGEILFLLGSSGCGKTTLLRAIAGFEQPSNGEIWL 70
Query: 60 NGVDVT----SYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEIS 115
+ + P ++R+L Y+ Q+ LFPH+ VY NIA+GL + E ++++I
Sbjct: 71 KERLIFGENFNLPTQQRHLGYVVQEGVLFPHLNVYRNIAYGLGNGKGKNSEEKTRIEQIM 130
Query: 116 KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ GI L R P LSGG++QRVA+ARAL PEL+LLDEPF+ LD + + EM
Sbjct: 131 QLTGIFELADRFPHQLSGGQQQRVALARALAPNPELILLDEPFSALDEHLRQQIRQEMLQ 190
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
++ G +++ VTH +E++ D++ ++ +G+++Q+ + ++ +P A+F+G E+
Sbjct: 191 ALRQSGASAIFVTHDRDESLRYADKIAIIQQGKILQIDTPRTLYWSPNHLETAKFMG-ES 249
Query: 236 IIEGVAKGNILEANGVKITL---PIS----VEGKVRIGVRPEDIILSTEPVKTSARNEFR 288
I V N+L+ N + L PI + + RI +RPE L +A F
Sbjct: 250 I---VLPANLLDENTAQCQLGNIPIKNKSISQNQGRILLRPEQFSLFKTSENPTAL--FN 304
Query: 289 AEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFK 337
++ IE G + + ++I G + +I +L I + VY+ K
Sbjct: 305 GQIKQIEFKGKITSIQIEINGYAI--WIENVISPDLSIGDNLPVYLHRK 351
>gb|AAC21775.1| (U32695) iron(III) ABC transporter, ATP-binding protein (hitC)
[Haemophilus influenzae Rd]
Length = 351
Score = 171 bits (429), Expect = 1e-41
Identities = 114/349 (32%), Positives = 191/349 (54%), Gaps = 20/349 (5%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L V++++K + E + L DISF +++ E +LG SG GKT LL IAG +P G I L
Sbjct: 6 LLTVKNLNKFFNEQQVLHDISFSLQRGEILFLLGSSGCGKTTLLRAIAGFEQPSNGEIWL 65
Query: 60 NGVDVT----SYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEIS 115
+ + P ++R+L Y+ Q+ LFPH+ VY NIA+GL + E ++++I
Sbjct: 66 KERLIFGENFNLPTQQRHLGYVVQEGVLFPHLNVYRNIAYGLGNGKGKNSEEKTRIEQIM 125
Query: 116 KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ GI L R P LSGG++QRVA+ARAL PEL+LLDEPF+ LD + + EM
Sbjct: 126 QLTGIFELADRFPHQLSGGQQQRVALARALAPNPELILLDEPFSALDEHLRQQIRQEMLQ 185
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
++ G +++ VTH +E++ D++ ++ +G+++Q+ + ++ +P A+F+G E+
Sbjct: 186 ALRQSGASAIFVTHDRDESLRYADKIAIIQQGKILQIDTPRTLYWSPNHLETAKFMG-ES 244
Query: 236 IIEGVAKGNILEANGVKITL---PIS----VEGKVRIGVRPEDIILSTEPVKTSARNEFR 288
I V N+L+ N + L PI + + RI +RPE L +A F
Sbjct: 245 I---VLPANLLDENTAQCQLGNIPIKNKSISQNQGRILLRPEQFSLFKTSENPTAL--FN 299
Query: 289 AEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFK 337
++ IE G + + ++I G + +I +L I + VY+ K
Sbjct: 300 GQIKQIEFKGKITSIQIEINGYAI--WIENVISPDLSIGDNLPVYLHRK 346
>pir||T43920 YfuC protein [imported] - Yersinia enterocolitica
>gi|619575|emb|CAA87396.1| (Z47200) YfuC protein
[Yersinia enterocolitica]
Length = 349
Score = 171 bits (428), Expect = 1e-41
Identities = 110/313 (35%), Positives = 167/313 (53%), Gaps = 10/313 (3%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L + K Y+ + L I V I+GPSG+GKT LL IIAG PD G++IL
Sbjct: 4 LDFNKIGKSYQSVRVLEGIDLQVTAGSRTAIVGPSGSGKTTLLRIIAGFETPDSGKVILQ 63
Query: 61 GVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
G + T P KR + ++PQD ALFPH T NIA+GLK S+Q+ R++ ++ +
Sbjct: 64 GNPLFDQSTHVPAHKRGIGFVPQDGALFPHFTAAGNIAYGLKG---SKQDKARRIDKLME 120
Query: 117 VLGIEHLLHRK-PRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ ++ L + P +SGG++QRVA+ARAL P L+LL EPF+ LD ++ +
Sbjct: 121 MVALDRRLAQLWPHEISGGQQQRVALARALGQRPALMLLVEPFSTLDTALRASTRKAVAE 180
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
+ S+ VTH EA+S D+V VM G+LV VG +E++ P+DE A FLG
Sbjct: 181 LLSQANIASILVTHDQSEALSFADQVAVMRAGKLVHVGAPQELYLRPIDEPTATFLGETL 240
Query: 236 IIE-GVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGI 294
I+ + G A G + +G+ RI +RPE + ++ P A+++ I
Sbjct: 241 ILSPNIEPGWPDCALGRVKVDDATRQGQTRIMLRPEQVTITPLPSAHHYPTHCLAKIVSI 300
Query: 295 EELGPLVRVNLKI 307
+ G + + L I
Sbjct: 301 DFAGFISTLTLSI 313
>pir||F81929 probable iron-uptake permease ATP-binding protein NMA0842
[imported] - Neisseria meningitidis (group A strain
Z2491) >gi|7379558|emb|CAB84123.1| (AL162754) putative
iron-uptake permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 352
Score = 170 bits (427), Expect = 2e-41
Identities = 113/341 (33%), Positives = 174/341 (50%), Gaps = 25/341 (7%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L + +SK ++ L DIS + E I+G SG GKT LL +AG +PD G I L+
Sbjct: 5 LHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKTTLLRCLAGFEQPDFGEISLS 64
Query: 61 GVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
G + T+ P +R L Y+ Q+ LFPH+TVY N A+GL + + ++++ + +
Sbjct: 65 GRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTAYGLGNGKGKTAQERQRIEAMLE 124
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
+ GI L R P LSGG++QRVA+ARAL +PEL+LLDEPF+ LD Q + + +M
Sbjct: 125 LTGISELAGRYPHELSGGQQQRVALARALAPDPELILLDEPFSALDEQLRRQIREDMIAA 184
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
+ G +++ V+H EEA+ DR+ VM +GR++Q E++ P D A F+G
Sbjct: 185 LRANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADLDAALFIG---- 240
Query: 237 IEGVAKGNILEANG----------VKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNE 286
EG+ L A+G V+ P G + I RPE L T++
Sbjct: 241 -EGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTLLI--RPEQFSLHPHSAPTAS--- 294
Query: 287 FRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGIS 327
A V+ ++L++G L + + + GIS
Sbjct: 295 IHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGIS 335
>gb|AAD51830.1|AF175299_5 (AF175299) ThuK [Sinorhizobium meliloti]
Length = 342
Score = 168 bits (420), Expect = 1e-40
Identities = 88/233 (37%), Positives = 142/233 (60%), Gaps = 2/233 (0%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L++ + K + F ++ +S ++K E + +GPSG GK+ LL +IAG+ E G + +
Sbjct: 4 LQLRDIRKSFGAFDVIKGVSMEIKPGEFMVFVGPSGCGKSTLLRLIAGLEEITSGTLAFD 63
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
G V P +R +A + Q YAL+PHMTVY+N+AFG++L +Q+ ++V+ +++L +
Sbjct: 64 GQIVNQLTPSRRGIAMVFQSYALYPHMTVYENMAFGMQLAGKDKQQCRKRVEAAAEMLQL 123
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEM-KVWRKE 179
L R PR LSGG++QRVAI RA+V +P++ L DEP +NLD + E+ K+ R
Sbjct: 124 TPYLERLPRQLSGGQRQRVAIGRAIVRDPKVFLFDEPLSNLDAALRVATRLEIAKLHRSM 183
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
T ++VTH EA++L DR+ V+ G + Q+G E++ P VA F+G
Sbjct: 184 HKTTMIYVTHDQVEAMTLADRICVLRDGLVEQIGTPLELYETPNSVFVAGFIG 236
>sp|P21410|SFUC_SERMA IRON(III)-TRANSPORT ATP-BINDING PROTEIN SFUC >gi|72462|pir||QRSEUC
nucleotide-binding protein sfuC - Serratia marcescens
>gi|152862|gb|AAA26575.1| (M33815) iron transport
protein (sufC) [Serratia marcescens]
Length = 345
Score = 166 bits (415), Expect = 5e-40
Identities = 114/314 (36%), Positives = 168/314 (53%), Gaps = 16/314 (5%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L + + K Y + L I V I+GPSG+GKT LL IIAG PD G+I+L
Sbjct: 4 LELHGIGKSYNAIRVLEHIDLQVAAGSRTAIVGPSGSGKTTLLRIIAGFEIPDGGQILLQ 63
Query: 61 GVDVTS----YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
G + + P R + ++PQD ALFPH TV NI FGLK ++E R+++ + +
Sbjct: 64 GQAMGNGSGWVPAHLRGIGFVPQDGALFPHFTVAGNIGFGLKG---GKREKQRRIEALME 120
Query: 117 VLGIEHLLHRK-PRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
++ ++ L P LSGG++QRVA+ARAL +P L+LLDEPF+ LD ++ +
Sbjct: 121 MVALDRRLAALWPHELSGGQQQRVALARALSQQPRLMLLDEPFSALDTGLRAATRKAVAE 180
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
E S+ VTH EA+S D+V VM GRL QVG ++++ PVDE A FLG
Sbjct: 181 LLTEAKVASILVTHDQSEALSFADQVAVMRSGRLAQVGAPQDLYLRPVDEPTASFLGETL 240
Query: 236 IIEG-VAKGNILEANGVKITLPISVEGKVRIGVRPEDIILS-TEPVKTSARNEFRAEVIG 293
++ +A G A G G RI +RPE I + ++P + +A + G
Sbjct: 241 VLTAELAHGWADCALGRIAVDDRQRSGPARIMLRPEQIQIGLSDPAQRG-----QAVITG 295
Query: 294 IEELGPLVRVNLKI 307
I+ G + +NL++
Sbjct: 296 IDFAGFVSTLNLQM 309
>pir||T36808 probable sugar transport system ATP-binding chain - Streptomyces
coelicolor >gi|5441781|emb|CAB46805.1| (AL096811)
putative ABC sugar transporter, ATP-binding subunit
[Streptomyces coelicolor A3(2)]
Length = 445
Score = 165 bits (413), Expect = 8e-40
Identities = 114/343 (33%), Positives = 184/343 (53%), Gaps = 20/343 (5%)
Query: 2 LRVESVSKDY-KEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+ + VSK Y + ++ D +S D+ E ++LGPSG GK+ +L +IAG+ E EG + L
Sbjct: 5 ISLHDVSKTYARGVRVVDRLSLDIAPGEFLVLLGPSGCGKSTVLRMIAGLEEITEGELTL 64
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+G P +R +A + Q++AL+P+MT NI F L++ R V +++LG
Sbjct: 65 DGAYANDLLPAERRMAMVFQNFALYPNMTTRGNIGFPLRVEDPQTDHTPR-VDATARMLG 123
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
IE LL R P LSGGE+QRVA+ RA+ P L+DEP +NLD + ++ E+ +E
Sbjct: 124 IEDLLDRLPAQLSGGERQRVAMGRAISRHPTAFLMDEPLSNLDAKLRNHLRAEITRLTRE 183
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE--NII 237
LG T+++VTH EA+SLGDRV V+ G L QV + V++ P + VA F+G N++
Sbjct: 184 LGVTTIYVTHDQSEAMSLGDRVAVLRGGVLQQVDTPRAVYALPRNVFVAAFIGTPRINLL 243
Query: 238 EGVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEEL 297
G+ + + A + + GK + + PE + L + ++ + R ++G+
Sbjct: 244 RGLVRAPLDGAMTISL-------GKQFLRL-PEPLSLDHQLLRV---QQGREVIVGLR-- 290
Query: 298 GPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSA 340
VR+ + +T L+E +G EV V F T +
Sbjct: 291 SEAVRIAKPSSARPGEVLLT--GLVEHVEFQGHEVLVHFNTGS 331
>emb|CAB61861.1| (AL133252) putative ABC-transporter ATP binding protein
[Streptomyces coelicolor A3(2)]
Length = 354
Score = 165 bits (413), Expect = 8e-40
Identities = 102/289 (35%), Positives = 153/289 (52%), Gaps = 8/289 (2%)
Query: 2 LRVESVSKDY---KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
LR+E ++ Y +E L + DV +LGPSG GKT +++ +G++ P G +
Sbjct: 12 LRLEQITVTYPGHREPVLDGLDLDVADGRLLALLGPSGCGKTTTVQVASGLLTPGRGAVH 71
Query: 59 LNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
L G +VT PPE R A + Q L PH T DN+AF ++R SR++ + +
Sbjct: 72 LRGTEVTRVPPEHRGAAVVFQQPMLLPHRTALDNVAFPARMRGRSRRDARTSALAHLERV 131
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G+ L R PR LSGG+ QRVA+ARAL EP +LLLDEPF+ LD + + ++
Sbjct: 132 GLGALAARYPRQLSGGQAQRVALARALAAEPAVLLLDEPFSALDPSLRHTMRDLLTTVQR 191
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
EL T++ VTH EA S+ D + ++ RG L+Q ++++ P VA FLG +
Sbjct: 192 ELAVTTVLVTHDQTEAASVADTIALLDRGGLLQQAQPADLYARPASLAVAHFLGCPTALP 251
Query: 239 G--VAKGNILEANGVKITLPISV--EGKVRIGVRPEDIILSTEPVKTSA 283
G +G G ++ LP +V G + +RPE + L T P +A
Sbjct: 252 GHVTPQGRFACPLG-ELDLPDTVTHRGPGHLVIRPEAVQLGTGPDTVAA 299
>pir||F83203 probable ATP-binding component of ABC transporter PA3538 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9949688|gb|AAG06926.1|AE004774_4 (AE004774) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 360
Score = 164 bits (412), Expect = 1e-39
Identities = 110/319 (34%), Positives = 174/319 (54%), Gaps = 21/319 (6%)
Query: 1 MLRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L ++ ++ Y K+ +D+ + + +LGPSG GKT L IAG G+I L
Sbjct: 6 LLNLKDLACGYASQKVVQDLDLHLNAGDIGCLLGPSGCGKTTTLRAIAGFEPVLAGQIEL 65
Query: 60 NGVDVTSYP-----PEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEI 114
G +V S P PEKR + + QDYALFPH++V DN+ FG++ + +R V+E+
Sbjct: 66 GG-EVISRPGFTLAPEKRRIGMVFQDYALFPHLSVADNVGFGIR----KHPQRERLVREL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+++ ++HL R P LSGG++QRVA+ARAL EP LLLLDEPF+NLDV+ + E++
Sbjct: 121 LELVKLDHLAARHPHELSGGQQQRVALARALAPEPLLLLLDEPFSNLDVELRRSLSQEVR 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE 234
K G +++ VTH EEA ++ D +GV G L Q ++ P+ VA F+G
Sbjct: 181 EILKARGTSAILVTHDQEEAFAVCDHIGVFKEGHLEQWDTPYNLYHEPLTPFVASFVGQG 240
Query: 235 NIIEGVAKGNILEANGVKITLPISVEGKVRIGV---RPEDIILSTEPVKTSARNEFRAEV 291
I +G +L + V+ L + + G + D++L + + + + E +A +
Sbjct: 241 YFI----RGQLLSPDTVQTELGV-IRGNRAYSLPSGSAVDVLLRPDDLVHAPQGELKARI 295
Query: 292 IGIEELG--PLVRVNLKIG 308
+G LG L R+ L G
Sbjct: 296 VGKTFLGAATLYRLQLPTG 314
>dbj|BAB04231.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 349
Score = 162 bits (407), Expect = 4e-39
Identities = 102/309 (33%), Positives = 168/309 (54%), Gaps = 22/309 (7%)
Query: 19 ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVT----SYPPEKRNL 74
+ ++K E +LGPSG GKT L +IAG +P G I + G V + PPEKR +
Sbjct: 24 VHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPTSGSIKIGGEVVYENQFTVPPEKRGI 83
Query: 75 AYIPQDYALFPHMTVYDNIAFGLKL--RRISRQEIDRKVKEISKVLGIEHLLHRKPRTLS 132
+ QDYALFPH+T+ N+ FGL R R+ + KE+ +++G+ R P LS
Sbjct: 84 GMVFQDYALFPHLTIAKNVMFGLSKWGTRAKRE----RAKEVLELVGLADYAARYPHELS 139
Query: 133 GGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFE 192
GG++QRVA+ARAL +P ++L+DEPF+NLD + + E+ ++ T++ VTH +
Sbjct: 140 GGQQQRVALARALAPKPHVVLMDEPFSNLDAGLREKMRFEVTTILRKANATAIIVTHDQK 199
Query: 193 EAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNI--LEANG 250
+A ++ DRV VM G + Q+ +E++ P + VA+F+G N++ G ++ ++ +
Sbjct: 200 DAFAVADRVVVMNEGVIQQIATPREMYRCPKNCFVAQFVGKTNLLSGRLCEDMRHVDTHI 259
Query: 251 VKITLPISVE---GKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKI 307
+++LP E V++ +RPE L+ E F +V + G V + +
Sbjct: 260 GRVSLPAQSEVMLENVKVSIRPEGCKLAEE-------GRFTGKVERVTYSGEYQEVVVNL 312
Query: 308 GGITLKAFI 316
G T + I
Sbjct: 313 GAGTTEPMI 321
>pir||T36154 probable ABC-type transport system ATP-binding protein -
Streptomyces coelicolor >gi|5531380|emb|CAB51012.1|
(AL096852) putative ABC transporter ATP-binding protein
[Streptomyces coelicolor A3(2)]
Length = 424
Score = 161 bits (404), Expect = 9e-39
Identities = 93/239 (38%), Positives = 142/239 (58%), Gaps = 8/239 (3%)
Query: 2 LRVESVSKDYK---EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
+ +E+++K Y + + ++S ++K E I +GPSG GK+ L++I +IEP GRI
Sbjct: 22 IELEALTKRYPGSPQPAVENVSMEIKAGETVIFVGPSGCGKSTTLKMINRLIEPSGGRIR 81
Query: 59 LNGVDVTSYPPEK--RNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
+NG DVT P K R + Y Q LFPHMTV NIA ++ S+ I +V+E+
Sbjct: 82 INGEDVTDIDPVKLRRKVGYAIQSSGLFPHMTVAQNIALVPRMIGWSKARIRERVEEMLD 141
Query: 117 VLGIE--HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
++G++ R PR LSGG++QRV +ARAL +P +LL+DEPF +D T+ E+
Sbjct: 142 LVGLDAGEFHGRYPRQLSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRDHLQDELI 201
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVML-RGRLVQVGDVKEVFSNPVDEGVARFLG 232
+ EL T + VTH F+EAI LGDR+ V+ R + Q + + +NP D+ V+ F+G
Sbjct: 202 RLQHELHKTIVFVTHDFDEAIKLGDRIAVLRERSHIAQFDTPEAILTNPADDFVSGFVG 260
>dbj|BAA75384.1| (AB013374) MsmX [Bacillus halodurans]
Length = 349
Score = 161 bits (402), Expect = 2e-38
Identities = 101/309 (32%), Positives = 168/309 (53%), Gaps = 22/309 (7%)
Query: 19 ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVT----SYPPEKRNL 74
+ ++K E +LGPSG GKT L +IAG +P G I + G V + PPEKR +
Sbjct: 24 VHLTIEKGEIIALLGPSGCGKTTTLRMIAGFEQPTSGSIKIGGEVVYENQFTVPPEKRGI 83
Query: 75 AYIPQDYALFPHMTVYDNIAFGLKL--RRISRQEIDRKVKEISKVLGIEHLLHRKPRTLS 132
+ QDYALFPH+T+ N+ FGL R R+ + KE+ +++G+ R P LS
Sbjct: 84 GMVFQDYALFPHLTIAKNVMFGLSKWGTRAKRE----RAKEVLELVGLADYAARYPHELS 139
Query: 133 GGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFE 192
GG++QRVA+ARAL +P ++L+DEPF+NLD + + E+ ++ T++ VTH +
Sbjct: 140 GGQQQRVALARALAPKPHVVLMDEPFSNLDAGLREKMRFEVTTILRKANATAIIVTHDQK 199
Query: 193 EAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNI--LEANG 250
+A ++ DRV VM G + Q+ +E++ P + VA+F+G N++ G ++ ++ +
Sbjct: 200 DAFAVADRVVVMNEGVIQQIATPREMYRCPKNCFVAQFVGKTNLLSGRLCEDMRHVDTHI 259
Query: 251 VKITLPIS---VEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKI 307
+++LP + V++ +RPE L+ E F +V + G V + +
Sbjct: 260 GRVSLPAQSGVMLENVKVSIRPEGCKLAEE-------GRFTGKVERVTYSGEYQEVVVNL 312
Query: 308 GGITLKAFI 316
G T + I
Sbjct: 313 GAGTTEPMI 321
>gi|11497707 nitrate ABC transporter, ATP-binding protein (nrtC-1)
[Archaeoglobus fulgidus] >gi|7445759|pir||G69260 nitrate
ABC transporter, ATP-binding protein (nrtC-1) homolog -
Archaeoglobus fulgidus >gi|2650561|gb|AAB91142.1|
(AE001100) nitrate ABC transporter, ATP-binding protein
(nrtC-1) [Archaeoglobus fulgidus]
Length = 243
Score = 159 bits (399), Expect = 3e-38
Identities = 92/220 (41%), Positives = 136/220 (61%), Gaps = 6/220 (2%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ V+ +SK + E K D +SF+V+ E I+GPSG GK+ LL I+AG+++P EG +++
Sbjct: 1 MITVKGISKFFGELKALDGVSFEVEDGETCAIIGPSGCGKSTLLLIMAGLLKPSEGEVLV 60
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+ V S +N A I QD+ LFP TVYDN+A GLK+R SR+ +V + + G
Sbjct: 61 DDRAVNS---PLKNAALILQDFGLFPWKTVYDNVALGLKIRGFSRRAERERVTALLEKFG 117
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
++ P+ LSGG KQRVAIARA+ IEP++LL+DEP ++LD ++ + KE
Sbjct: 118 LKGFEKSYPKQLSGGMKQRVAIARAIAIEPQILLMDEPLSSLDALSREEMQNFLLNLWKE 177
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLR--GRLVQVGDVKE 217
T + VTHS EEA+ LG ++ V+ GR+ V D +E
Sbjct: 178 TKTTMVLVTHSIEEAVFLGRKIVVLTERPGRVKAVVDNRE 217
>gb|AAD45529.1|AF162655_1 (AF162655) choline transporter [Streptococcus pneumoniae]
Length = 242
Score = 159 bits (398), Expect = 4e-38
Identities = 84/237 (35%), Positives = 143/237 (59%), Gaps = 5/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ ++V+ Y E LRD++ ++ E +++GPSG+GKT +L++I ++EP +G I +
Sbjct: 1 MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYM 60
Query: 60 NGVDVTSYPPEKRNLA--YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKV 117
+G + Y + L+ Y+ Q ALFP++TV +NIA +++ S++EI +K +E+
Sbjct: 61 DGKRIKDYDERELRLSTGYVLQAIALFPNLTVAENIALIPEMKGWSKEEITKKTEELLAK 120
Query: 118 LG--IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
+G + HR P LSGGE+QRV I RA++ +P++ L+DEPF+ LD ++ + K
Sbjct: 121 VGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMDEPFSALDAISRKQLQVLTKE 180
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
KE G T++ VTH +EA+ L DR+ V+ G + QV + + + P + VA G
Sbjct: 181 LHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVANPETILKAPATDFVADLFG 237
>pir||S77084 ABC-type transport protein sll0739 - Synechocystis sp. (strain PCC
6803) >gi|1006620|dbj|BAA10776.1| (D64005) ABC
transporter [Synechocystis sp.]
Length = 615
Score = 159 bits (397), Expect = 6e-38
Identities = 113/316 (35%), Positives = 173/316 (53%), Gaps = 19/316 (6%)
Query: 6 SVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDV- 64
++ K +F L D++F + E +LG SG+GKT+ L IAGI P +GRIILNG +
Sbjct: 261 NIQKQLAQFSL-DVTFTTQGET-VGLLGASGSGKTMTLRCIAGIETPTQGRIILNGRTLF 318
Query: 65 -----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+ P +R + + Q+YALFPH+TV NIAFGL R +S Q +V+E ++
Sbjct: 319 DSQRNINVPSHERKVGLVLQNYALFPHLTVAQNIAFGL--RHLSPQRRSLRVEEQLTLVN 376
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTE-MKVWRK 178
+E + R P LSGG++QRVA+ARAL EP +LLLDEPF+ LD + + +K+
Sbjct: 377 LEKMGDRYPHQLSGGQQQRVALARALAPEPNVLLLDEPFSALDTHLRYELEKQLLKILSG 436
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI-- 236
GFT L V+H+ EEA + ++ V+ +G+LV GD + +F P +A+ G +N
Sbjct: 437 YKGFT-LFVSHNLEEAYRICQKLLVLSQGKLVATGDKQAIFDRPGSVTIAQLTGCKNYSP 495
Query: 237 IEGVAKGNILEAN---GVKITLPISVEGKVRIGVRPEDI-ILSTEPVKTSARNEFRAEVI 292
I+ + + + + ++ T P+S + + IG+R I L S N F V+
Sbjct: 496 IQVIDRHTVRALDWQCTLQTTEPVSSD-QTHIGIRAHQIRFLDAGDHHQSPVNTFPGWVV 554
Query: 293 GIEELGPLVRVNLKIG 308
E + V LK+G
Sbjct: 555 WTSETPHRMTVYLKLG 570
>sp|Q57855|Y412_METJA HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MJ0412
>gi|2129162|pir||D64351 nitrate transport ATP-binding
protein - Methanococcus jannaschii
>gi|1591118|gb|AAB98401.1| (U67493) nitrate transporter
protein (nrtC) homolog (cmpC) [Methanococcus jannaschii]
Length = 267
Score = 158 bits (395), Expect = 1e-37
Identities = 101/256 (39%), Positives = 149/256 (57%), Gaps = 16/256 (6%)
Query: 2 LRVESVSKDYKEFK------LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
L+VE+++K + EF L +I+ +V + E ++GPSG GKT LL IIAG+ P EG
Sbjct: 17 LKVENLTKIF-EFNGNRVKALDNINLEVYENEFLTVMGPSGCGKTTLLRIIAGLDYPTEG 75
Query: 56 RIILNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEIS 115
+++L+G +V P R + + Q Y L P TV N+ FGL+L+ I + E K+
Sbjct: 76 KVLLDGKEVKG-PGADRGVVF--QQYTLMPWRTVLKNVTFGLELKGIPKNERIEIAKKFI 132
Query: 116 KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTE-MK 174
K++G+E P LSGG +QRVAIAR L +PE++L+DEPFA LD QT++ E +K
Sbjct: 133 KMVGLEGFEDAYPYQLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLK 192
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLR--GRLVQVGDVKEVFSNPVDEGVARFLG 232
+W+KE T VTHS +EA+ L DRV V+ GR+ ++ VK P D FL
Sbjct: 193 IWQKEKK-TVFFVTHSVDEAVYLSDRVVVLTARPGRIKEI--VKIDLERPRDRTSIEFLE 249
Query: 233 FENIIEGVAKGNILEA 248
+ I + K +L++
Sbjct: 250 YRKKILNILKDEVLKS 265
>gb|AAD29279.1|AF112365_2 (AF112365) ProVL [Streptomyces coelicolor A3(2)]
Length = 429
Score = 157 bits (394), Expect = 1e-37
Identities = 91/239 (38%), Positives = 140/239 (58%), Gaps = 8/239 (3%)
Query: 2 LRVESVSKDYK---EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
+ +E+++K Y + + ++S ++K E I +GPSG GK+ L++I +IEP GRI
Sbjct: 27 IELEALTKRYPGSPQPAVENVSMEIKAGETVIFVGPSGCGKSTTLKMITRLIEPSGGRIR 86
Query: 59 LNGVDVTSYPPEK--RNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
+NG DVT P K R + Y Q LFPHM NIA ++ S+ I +V+E+
Sbjct: 87 INGEDVTDIDPVKLRRKVGYAIQSSGLFPHMNRRQNIALVPRMIGWSKARIRERVEEMLD 146
Query: 117 VLGIE--HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
++G++ R PR LSGG++QRV +ARAL +P +LL+DEPF +D T+ E+
Sbjct: 147 LVGLDAGEFHGRYPRQLSGGQQQRVGVARALAADPPVLLMDEPFGAVDPITRDHLQDELI 206
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVML-RGRLVQVGDVKEVFSNPVDEGVARFLG 232
+ EL T + VTH F+EAI LGDR+ V+ R + Q + + +NP D+ V+ F+G
Sbjct: 207 RLQHELHKTIVFVTHDFDEAIKLGDRIAVLRERSHIAQFDTPEAILTNPADDFVSGFVG 265
>pir||T44856 molybdenum transport ATPase (EC 3.6.1.-) [imported] - Arthrobacter
nicotinovorans plasmid pAO1 >gi|2288881|emb|CAA71778.1|
(Y10817) ATPase [Arthrobacter nicotinovorans]
Length = 349
Score = 155 bits (387), Expect = 9e-37
Identities = 112/340 (32%), Positives = 169/340 (48%), Gaps = 20/340 (5%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL--------NGVDVTSYPP 69
+++F ++ E +LGP+GAGK+ LL I+AG+I PD G +L +G PP
Sbjct: 15 NVAFTMEATETVAVLGPNGAGKSTLLGILAGLIRPDSGNAMLGRKRCFKLDGGTNNFLPP 74
Query: 70 EKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPR 129
R A + Q+ LFPHM+V +N+AFG + +R + + + + R+P
Sbjct: 75 HTRGTALLAQEPLLFPHMSVLENVAFGPRAAGANRSKALQTGRHWLTEVEAAGFADRRPG 134
Query: 130 TLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTH 189
LSGG+ QRVAIARAL +PELLLLDEP A LD+ +K R ++ +TH
Sbjct: 135 QLSGGQAQRVAIARALATDPELLLLDEPMAALDIHAAPMLRRLLK--RVLSNRRAIIITH 192
Query: 190 SFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKG-NILEA 248
+A+ L DR V+ GR+ + G + V P + A G N++ G G +
Sbjct: 193 DVLDALVLADRAVVLEGGRITEEGPTRRVLEKPRSKFAAGLAGM-NLLPGTITGYGLTSD 251
Query: 249 NGVKITL---PISVEGKVRIGV-RPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVN 304
G+ IT +V G+ + V P + + S RN F + +E G +RV+
Sbjct: 252 GGLDITAHPEDGAVPGQNGVAVFSPTAVSVFPSAKHGSPRNSFAVNITELEPHGDQIRVH 311
Query: 305 LKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
GG L A IT ++ +LG+ G VY K +AI V+
Sbjct: 312 --AGG--LSADITPAASADLGLMPGMIVYFVIKATAIAVY 347
>pir||G83159 probable ATP-binding component of ABC transporter PA3891 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9950072|gb|AAG07278.1|AE004806_5 (AE004806) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 387
Score = 154 bits (385), Expect = 1e-36
Identities = 88/248 (35%), Positives = 140/248 (55%), Gaps = 10/248 (4%)
Query: 1 MLRVESVSKDY-----KEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDE 54
M+ ++ +SK + KEF+ D +S V+K E + LGPSG GKT L++I II P
Sbjct: 1 MIELDKLSKTFTQKNGKEFRAVDSVSLTVEKGEICVFLGPSGCGKTTTLKMINRIIPPTS 60
Query: 55 GRIILNGVDVTSYPPE--KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVK 112
GR++++G D +R++ Y+ Q LFP+MT+ +NI +L + K +
Sbjct: 61 GRVLIDGQDTADLDEVTLRRHIGYVIQQIGLFPNMTIEENIMVVPRLLGWDKARCKEKAR 120
Query: 113 EISKVLGIE--HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
E+ ++ +E L R PR LSGG++QRV + RAL + LLL+DEPF +D +
Sbjct: 121 ELMSMVKLEPKQYLQRYPRELSGGQQQRVGVIRALAADAPLLLMDEPFGAVDPINRESIQ 180
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARF 230
E +++LG T + V+H +EAI LGD+V V GRL+Q + ++P DE V+ F
Sbjct: 181 NEFFEMQRKLGMTVIMVSHDIDEAIKLGDKVAVFKSGRLLQYDHPDTLLAHPADEFVSAF 240
Query: 231 LGFENIIE 238
G ++ ++
Sbjct: 241 TGQDSTLK 248
>gb|AAB63561.1| (U33937) FbpC [Neisseria gonorrhoeae] >gi|1588874|prf||2209379C
fbpC gene [Neisseria gonorrhoeae]
Length = 352
Score = 152 bits (381), Expect = 4e-36
Identities = 106/326 (32%), Positives = 160/326 (48%), Gaps = 23/326 (7%)
Query: 2 LRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
L + +SK ++ L DIS + E I+G SG GKT LL +AG +PD G I L+
Sbjct: 5 LHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLS 64
Query: 61 GVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
G + T+ P + PH+TVY NIA+GL + + ++++ + +
Sbjct: 65 GKTIFSKNTNLPVRETTFGLPRTGRCSVPHLTVYRNIAYGLGNGKGRTAQERQRIEAMLE 124
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
+ GI L R P LSGG++QRVA+ARAL +PEL+LLDEPF+ LD Q + + +M
Sbjct: 125 LTGISELAGRYPHELSGGQQQRVALARALAPDPELILLDEPFSALDEQLRRQIREDMIAA 184
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENI 236
+ G +++ V+H EEA+ DR+ VM +GR++Q E++ P D F+G
Sbjct: 185 LRANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADLDAVLFIG---- 240
Query: 237 IEGVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIE- 295
EG+ L A+G R+G P + S P T R E +
Sbjct: 241 -EGIVFPAALNADGT---------ADCRLGRLP---VQSGAPAGTRGTLLIRPEQFSLHP 287
Query: 296 ELGPLVRVNLKIGGITLKAFITRSSL 321
P+V ++ + T KA T SL
Sbjct: 288 HSAPVVSIHAVVLKTTPKARYTEISL 313
>pir||H83412 molybdenum transport protein ModC PA1861 [imported] - Pseudomonas
aeruginosa (strain PAO1)
>gi|9947850|gb|AAG05250.1|AE004612_4 (AE004612)
molybdenum transport protein ModC [Pseudomonas
aeruginosa]
Length = 361
Score = 151 bits (377), Expect = 1e-35
Identities = 113/352 (32%), Positives = 181/352 (51%), Gaps = 25/352 (7%)
Query: 11 YKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTS---- 66
Y F+L DI + + G SG+GK+ L IAG+ + EG + +NG
Sbjct: 12 YPGFEL-DIDLALPGRGVTALFGHSGSGKSTCLRCIAGLEKAAEGEVTINGETWQDSRRN 70
Query: 67 --YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLL 124
P +R L Y+ QD LF H+TV N+AFGLK RI+ E ++++ +LGIEHLL
Sbjct: 71 LFVAPHRRALGYVFQDANLFRHLTVRRNLAFGLK--RIAAAERRVELEQACALLGIEHLL 128
Query: 125 HRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTS 184
R P LSGGE+QRV IARAL+ P LLL+DEP A+LD++ K + ++ +EL
Sbjct: 129 ERMPERLSGGEQQRVGIARALLTSPRLLLMDEPLASLDLKRKGEILPYLERLHEELDIPV 188
Query: 185 LHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGN 244
L+V+HS +E L D + ++ G++ G + E + VD +A +IEG +
Sbjct: 189 LYVSHSPDEVARLADHLVLLENGKVRASGPIGETLAR-VDLPLALDDDAGVVIEGTVSDH 247
Query: 245 ---------ILEANGVKITL---PISVEGKVRIGVRPEDIILS-TEPVKTSARNEFRAEV 291
+L + +++ + P++ ++R V+ D+ L+ + ++S N V
Sbjct: 248 DPAYGLLTLVLPGSALQMRVAHAPLAPGKRLRFKVQARDVSLNLRDDAQSSILNRLPVRV 307
Query: 292 IGI--EELGPLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAI 341
+ + + V V L GG L A ITR S +L + G+ ++ K+ A+
Sbjct: 308 LELVDTDTAAHVLVRLDAGGNPLLARITRYSRDQLQLRPGQLLWAQIKSVAV 359
>sp|Q08381|MODC_RHOCA MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MODC
>gi|541289|pir||C36914 integral membrane protein ModC -
Rhodobacter capsulatus >gi|310274|gb|AAA71909.1|
(L06254) part of molybdenum transport system
[Rhodobacter capsulatus]
Length = 363
Score = 148 bits (369), Expect = 1e-34
Identities = 108/344 (31%), Positives = 174/344 (50%), Gaps = 24/344 (6%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTS----YPPEKRN 73
D +FDV + + GPSG GKT +L +AG+ G +++NGV PP +R
Sbjct: 16 DAAFDVPGQGVTALFGPSGCGKTTVLRCMAGLTRLPGGHLVVNGVTWQEGRQITPPHRRA 75
Query: 74 LAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSG 133
+ Y+ Q+ +LF H++V +N+ +GL R +R + E++++LGI+ LL R TLSG
Sbjct: 76 VGYVFQEASLFTHLSVRENLVYGL---RRARGPLRISEAEVTQLLGIDPLLRRPTATLSG 132
Query: 134 GEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEE 193
GE+QRVAI RAL+ +PELLL+DEP + LD ++ + ++ L + V+H E
Sbjct: 133 GERQRVAIGRALLSQPELLLMDEPLSALDRISRDEILPYLERLHASLQMPVILVSHDLSE 192
Query: 194 AISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKG-------NIL 246
L D + +M GR+ G + + ++P + R +IEGV + L
Sbjct: 193 VERLADTLVLMEAGRVRAAGPIAAMQADPNLPLIHR-PDLAAVIEGVVIALDPAYGLSTL 251
Query: 247 EANGVKITLPIS---VEGKVRIGVRPEDIILSTE-PVKTSARNEFRAEVIGIEEL-GPLV 301
+ G +I +P + + + R+ V D+ L P T+ N A ++G E G +
Sbjct: 252 QVPGGRIVVPGNLGPIGARRRLRVPATDVSLGRHAPTDTTILNALPAVILGAEAAEGYQI 311
Query: 302 RVNLKIG----GITLKAFITRSSLIELGISEGREVYVSFKTSAI 341
V L +G G +L A ++R S LG G +V K A+
Sbjct: 312 TVRLALGASGEGASLLARVSRKSFDLLGFQPGEQVVARLKAMAL 355
>sp|P95155|MODC_MYCTU MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MODC
>gi|7430359|pir||C70666 probable membrane-bound ABC
transporter modC - Mycobacterium tuberculosis (strain
H37RV) >gi|1781188|emb|CAB06128.1| (Z83859) modC
[Mycobacterium tuberculosis]
Length = 369
Score = 148 bits (369), Expect = 1e-34
Identities = 116/350 (33%), Positives = 171/350 (48%), Gaps = 34/350 (9%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN---------GVDVTSYP 68
D+ F V E +LGP+GAGK+ L +IAG++ PD G + L GV+V ++
Sbjct: 16 DVEFSVSAGEVLAVLGPNGAGKSTALHVIAGLLRPDAGLVRLGDRVLTDTEAGVNVATHD 75
Query: 69 PEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRR--------ISRQEIDRKVKEISKVLGI 120
R + + QD LFPH++V N+AFG + RR +R R ++E++
Sbjct: 76 ---RRVGLLLQDPLLFPHLSVAKNVAFGPQCRRGMFGSGRARTRASALRWLREVNA---- 128
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
E RKPR LSGG+ QRVAIARAL EP++LLLDEP LDV + + ++
Sbjct: 129 EQFADRKPRQLSGGQAQRVAIARALAAEPDVLLLDEPLTGLDVAAAAGIRSVLRSVVARS 188
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV 240
G + TH + +L DRV V+ G + ++G V +V + P AR G N++ G
Sbjct: 189 GCAVVLTTHDLLDVFTLADRVLVLESGTIAEIGPVADVLTAPRSRFGARIAGV-NLVNGT 247
Query: 241 --AKGNILEANGVK-ITLPIS--VEGKVRIGV-RPEDIILSTEPVKTSARNEFRAEVIGI 294
G++ +G P+ G I V P + + EP S RN V +
Sbjct: 248 IGPDGSLRTQSGAHWYGTPVQDLPTGHEAIAVFPPTAVAVYPEPPHGSPRNIVGLTVAEV 307
Query: 295 EELGP--LVRVNLKIGGIT-LKAFITRSSLIELGISEGREVYVSFKTSAI 341
+ GP LVR + + GG L A IT + EL ++ G V+ S K +
Sbjct: 308 DTRGPTVLVRGHDQPGGAPGLAACITVDAATELRVAPGSRVWFSVKAQEV 357
>pir||H82425 molybdenum ABC transporter, ATP-binding protein VCA0724 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658144|gb|AAF96623.1| (AE004401) molybdenum ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 366
Score = 146 bits (365), Expect = 3e-34
Identities = 109/330 (33%), Positives = 171/330 (51%), Gaps = 30/330 (9%)
Query: 31 ILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTS------YPPEKRNLAYIPQDYALF 84
I G SGAGKT L+ +I+G+ PD G I L G + S P E+R + Y+ QD LF
Sbjct: 31 IFGRSGAGKTSLINLISGLTTPDVGEIHLAGRTLFSSSQGIQLPIEQRKIGYVFQDARLF 90
Query: 85 PHMTVYDNIAFGLKLRRISRQEIDRKV-KEISKVLGIEHLLHRKPRTLSGGEKQRVAIAR 143
PH TV N+ +G+ + D + ++++L +E LL R PR LSGGEKQRVAI R
Sbjct: 91 PHYTVRGNLNYGVT-------DADPEYFASVTRLLALEPLLVRYPRDLSGGEKQRVAIGR 143
Query: 144 ALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGV 203
AL+ +P+LLL+DEP A+LD+ K M ++ + L+V+HS +E + L D + V
Sbjct: 144 ALLSKPDLLLMDEPLASLDMPRKKEVMPFLENLAQHFRLPILYVSHSMQEILRLADHLVV 203
Query: 204 MLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG-VAKGN-------ILEANGVKI-- 253
+ +G+++ G +++V+S+ F + VAK + + A V +
Sbjct: 204 LEQGKVLSAGPIEQVWSSKAMRPWQSFSEQSTLFSATVAKHHQTYGLTQVRLAEDVWLWV 263
Query: 254 -TLPISVEGKVRIGVRPEDIILSTE-PVKTSARNEFRAEVIGIEELGPLVR-VNLKI--- 307
+ V VR+ VR D+ ++ + P +S RN A ++ IE P + V+LK+
Sbjct: 264 QQVEADVGSSVRMQVRANDVSIALDKPTASSIRNILPARIVAIEHQQPSKKSVSLKLELA 323
Query: 308 GGITLKAFITRSSLIELGISEGREVYVSFK 337
L A +T + EL + G V+ K
Sbjct: 324 PHCYLWAVVTEWAHAELALEVGMPVFAQIK 353
>sp|P33360|YEHX_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YEHX
>gi|7445780|pir||H64980 hypothetical ABC transporter in
molR-bglX intergenic region - Escherichia coli (strain
K-12) >gi|405860|gb|AAA60492.1| (U00007) yehX
[Escherichia coli] >gi|1788450|gb|AAC75190.1| (AE000302)
putative ATP-binding component of a transport system
[Escherichia coli K12] >gi|744167|prf||2014253AA yehX
gene [Escherichia coli]
Length = 308
Score = 146 bits (365), Expect = 3e-34
Identities = 84/236 (35%), Positives = 137/236 (57%), Gaps = 4/236 (1%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ VSK + K + D++ + ++ +++G SG+GK+ L++I ++E D G I
Sbjct: 1 MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTLKMINRLVEHDSGEIRF 60
Query: 60 NGVDVTSYP--PEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKV 117
G ++ S P +R + Y Q LFPH +V NIA +L++ SR ID ++ E+ +
Sbjct: 61 AGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQLQKWSRARIDDRIDELMAL 120
Query: 118 LGIE-HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
LG+E +L R P LSGG++QRV +ARAL +P++LL+DEPF LD T+ EM
Sbjct: 121 LGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDEPFGALDPVTRGALQQEMTRI 180
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
+ LG T + VTH +EA+ L + + +M G +VQ G+ + + P ++ V +F G
Sbjct: 181 HRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGNPLTMLTRPANDFVRQFFG 236
>gb|AAG37225.1|AF298223_3 (AF298223) glutamine ABC transporter, ATP-binding subunit
[Methanococcus maripaludis]
Length = 243
Score = 146 bits (365), Expect = 3e-34
Identities = 86/238 (36%), Positives = 137/238 (57%), Gaps = 7/238 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ + ++ K +KE L+ + V K E +I+GPSG+GK+ LL I G+ + EG I
Sbjct: 1 MIEMVNIHKKFKEAHVLKGVDLKVAKGEVLVIVGPSGSGKSTLLRCINGLEKTTEGHIFF 60
Query: 60 NGVDVTSYPPE----KRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
G D+T ++ + + Q + LFPH+TV DNI F K+ +S++E + +E+
Sbjct: 61 EGDDITDKKVNINKIRQKIGMVFQQFNLFPHLTVLDNITFAPRKVLNVSKKEAEELAREL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
K +G+E ++ P LSGG++QRVAIARAL ++P+ +L DEP + LD + + MK
Sbjct: 121 LKKVGLEGKENQYPIQLSGGQQQRVAIARALAMKPDAMLFDEPTSALDPELVKEVLDVMK 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
E G T + VTH A +GDR+ + G++++ G+ +VFSNP +E F G
Sbjct: 181 QLAYE-GMTMVVVTHEMGFAKEVGDRLIFIDDGQILEDGNPSDVFSNPKNERTKNFFG 237
>sp|P31548|YABJ_ECOLI HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN YABJ
>gi|7445923|pir||B64728 probable ABC-type transport
protein - Escherichia coli >gi|1786253|gb|AAC73177.1|
(AE000117) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 232
Score = 146 bits (364), Expect = 4e-34
Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 1/220 (0%)
Query: 1 MLRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
ML++ ++ Y +R S V++ E ILGPSGAGK+ LL +IAG + P G + ++
Sbjct: 1 MLKLTDITWLYHHLPMR-FSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTID 59
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
GVD T+ PP +R ++ + Q+ LF H+TV NI GL K+ I++ +GI
Sbjct: 60 GVDHTTMPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAVQQGKMHAIARQMGI 119
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
++L+ R P LSGG++QRVA+AR LV E +LLLDEPF+ LD + +T + ++
Sbjct: 120 DNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSTSCQQQ 179
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFS 220
T L V+HS E+A + R V+ GR+ G E+ S
Sbjct: 180 KMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELLS 219
>sp|P37732|MODD_AZOVI MOLYBDENUM TRANSPORT ATP-BINDING PROTEIN MODD
>gi|419536|pir||S31045 hypothetical protein 4 -
Azotobacter vinelandii >gi|49180|emb|CAA48821.1|
(X69077) unnamed protein product [Azotobacter
vinelandii]
Length = 380
Score = 145 bits (362), Expect = 7e-34
Identities = 112/354 (31%), Positives = 173/354 (48%), Gaps = 29/354 (8%)
Query: 10 DYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNG------VD 63
DY F L D+ + + G SG+GKT LL +AG+ E R+ +NG
Sbjct: 32 DYAGFAL-DVDLTLPGHGVTALFGHSGSGKTTLLRCVAGLERAAEARLEINGELWQDSAA 90
Query: 64 VTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHL 123
P +R L Y+ Q+ +LFPH++V N+ +G+K R+ + + ++LGI HL
Sbjct: 91 GVFLPTHRRALGYVFQEASLFPHLSVRRNLEYGMK--RVDAASRQVSWERVLELLGIGHL 148
Query: 124 LHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFT 183
L R P LSGGE+QRV IARAL+ P LLL+DEP A LD++ K+ + ++ EL
Sbjct: 149 LERLPGRLSGGERQRVGIARALLTSPRLLLMDEPLAALDLKRKNEILPYLERLHDELDIP 208
Query: 184 SLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKG 243
L V+H +E L D V ++ +GR+ G ++++ + +D A +IE V
Sbjct: 209 MLFVSHLPDEVARLADHVVLLDQGRVTAQGSLQDIMAR-LDLPTAFHEDAGVVIESVVAE 267
Query: 244 NILEANGVKITLPISVEGKVRIGVRPE-------------DIILSTEPVK-TSARNEFRA 289
+ + ++ P G V + RPE D+ L+ ++ +S N A
Sbjct: 268 HDDHYHLTRLAFP---GGAVLVARRPEAPGQRLRLRVHARDVSLANSRIEDSSITNVLPA 324
Query: 290 EVIGIEELG--PLVRVNLKIGGITLKAFITRSSLIELGISEGREVYVSFKTSAI 341
V + E V V L+ G L A ITR S +LGI+ GR ++ K A+
Sbjct: 325 TVREVVEADTPAHVLVRLEAEGTPLIARITRRSCDQLGIAPGRRMWAQIKAVAL 378
>pir||H81391 amino-acid ABC transporter ATP-binding protein Cj0469 [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6967940|emb|CAB75107.1| (AL139075) amino-acid ABC
transporter ATP-binding protein [Campylobacter jejuni]
Length = 253
Score = 145 bits (362), Expect = 7e-34
Identities = 88/251 (35%), Positives = 140/251 (55%), Gaps = 8/251 (3%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L++E++ K Y L+DI+ +VK +E +ILGPSG GK+ LL I G+ E G I +
Sbjct: 3 ILKIENLQKYYGSHHALKDINLEVKAKEVVVILGPSGCGKSTLLRCINGLEEIASGNIYI 62
Query: 60 NGV----DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
+ D +P ++ + + Q Y LF H++V +NI G +K+++ + E+ ++ K
Sbjct: 63 DNEKIDKDFKEWPRMRQKVGMVFQSYELFEHLSVEENILLGPMKVQKRKKDEVLKEAKIW 122
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ +G+ H +H PR LSGG+KQR+AI R+L + PEL+L DE A LD + + M
Sbjct: 123 LEKVGLLHKIHAYPRELSGGQKQRIAIVRSLCMNPELMLFDEVTAALDPEIVREVLEVML 182
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFE 234
KE G T L VTH A ++ D++ M G++++ D K F NP E +FL
Sbjct: 183 NLAKE-GMTMLIVTHEMGFAKAVADKIIFMDEGKIIEENDPKSFFKNPKSERAKKFLNLF 241
Query: 235 NIIEGVAKGNI 245
+ + K NI
Sbjct: 242 D-YHNIDKNNI 251
>pir||H72356 amino acid ABC transporter, ATP-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981110|gb|AAD35676.1|AE001734_3 (AE001734) amino
acid ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 242
Score = 143 bits (358), Expect = 2e-33
Identities = 85/235 (36%), Positives = 139/235 (58%), Gaps = 5/235 (2%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L++E + K + K + LR I +VKK E I+GPSG+GK+ LL I + E G+I
Sbjct: 3 VLKIEDLHKYFGKLYVLRGIDLEVKKGEVISIIGPSGSGKSTLLRCINLLEEYQRGKIYF 62
Query: 60 NGVDVT--SYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEISK 116
G +T + + ++ + Q + LFPH++V +N+ +K++ + + E K K++ +
Sbjct: 63 KGELITHRNINRIRSSIGMVFQQFNLFPHLSVLNNLTLAPMKVKNMQKDEAVEKAKKLLE 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
+G+ ++ KP LSGG++QRVAIARAL+++PEL+L DEP + LD + + +K
Sbjct: 123 RVGLIEKINEKPGNLSGGQQQRVAIARALMMDPELMLFDEPTSALDPELVKEVLDVIKDL 182
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
+ G T L VTH A + DRV M GR+V++G +++FSNP +E FL
Sbjct: 183 AQS-GMTMLIVTHEMRFARDVSDRVVFMDEGRIVEMGPPEKIFSNPENERTREFL 236
>pir||E75122 hypothetical protein PAB1845 - Pyrococcus abyssi (strain Orsay)
>gi|5458205|emb|CAB49694.1| (AJ248285) hypothetical
protein [Pyrococcus abyssi]
Length = 305
Score = 143 bits (357), Expect = 3e-33
Identities = 76/220 (34%), Positives = 139/220 (62%), Gaps = 3/220 (1%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++ +E+++K Y +FK D +S +V+K F LGP+GAGKT + + GII PD G + L
Sbjct: 3 VIEIENLTKSYGKFKAVDNLSLEVEKGIIFGFLGPNGAGKTTTILSMLGIIIPDSGSVRL 62
Query: 60 NGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G D+ P + K L ++P++ ++ +T + N+ F I +QE +++++E+ K++
Sbjct: 63 LGYDIFKEPIKAKERLGFLPENATIYEELTAWRNLDFFASFYNIPKQEKEKRIEELLKLV 122
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G+ + +RK ++ S G KQR+ +A+AL+ +PELL+LDEP + LD Q +R + ++ + +K
Sbjct: 123 GLWDVRYRKVKSFSKGMKQRLLLAQALINDPELLILDEPTSGLDPQ-GARLVKDIILEQK 181
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEV 218
+ G T +H E L D+VG++++G+L VG ++E+
Sbjct: 182 KQGKTVFFSSHILSEVEELADKVGIIVKGKLRTVGTLEEI 221
>pir||S40582 hypothetical protein - Escherichia coli >gi|216486|dbj|BAA01337.1|
(D10483) inner membrane protein malK homolog(PIR:MMECMK)
[Escherichia coli]
Length = 232
Score = 142 bits (354), Expect = 6e-33
Identities = 83/220 (37%), Positives = 126/220 (56%), Gaps = 1/220 (0%)
Query: 1 MLRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
ML++ ++ Y +R S V++ E ILGPSGAGK+ LL +IAG + P G + ++
Sbjct: 1 MLKLTDITWLYHHLPMR-FSLTVERGEQVAILGPSGAGKSTLLNLIAGFLTPASGSLTID 59
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
GVD T+ PP +R ++ + Q+ LF H+TV NI GL K+ I++ +GI
Sbjct: 60 GVDHTTMPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAVQQGKMHAIARQMGI 119
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
++L+ R P LSGG++QRVA+AR LV E +LLLDE F+ LD + +T + ++
Sbjct: 120 DNLMARLPGELSGGQRQRVALARCLVREQPILLLDELFSALDPALRQEMLTLVSTSCQQQ 179
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFS 220
T L V+HS E+A + R V+ GR+ G E+ S
Sbjct: 180 KMTLLMVSHSVEDAARIATRSVVVADGRIAWQGMTNELLS 219
>pir||E70337 ABC transporter - Aquifex aeolicus >gi|2983089|gb|AAC06695.1|
(AE000689) ABC transporter [Aquifex aeolicus]
Length = 238
Score = 142 bits (354), Expect = 6e-33
Identities = 87/225 (38%), Positives = 130/225 (57%), Gaps = 5/225 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
ML V V K +K+ K L+ S V K E +LGP+GAGKT L I G I D+G+++L
Sbjct: 1 MLEVREVEKSFKKKKVLKGGSLSVNKGEIVGLLGPNGAGKTTLFNSIIGFISVDKGKVLL 60
Query: 60 NGVDVTSYPPEKR---NLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
+G DVT PP KR LA++PQ++ LF +TV +N+ L+ S++E K + + +
Sbjct: 61 DGEDVTHLPPFKRAQKGLAFLPQEHTLFEDLTVLENLLIFLEFFTDSKEEAITKAEALLE 120
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
G+ L +K LSGG+K+R+ IAR+L+ P+ +LLDEPFA LD S + E+
Sbjct: 121 DFGLLELKDQKAYALSGGQKRRLEIARSLITTPKYVLLDEPFAGLDPIIVSE-IREIVKN 179
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSN 221
K G L H+ E I + DRV ++ G+++ G +EV +N
Sbjct: 180 LKNNGIGVLITDHNVRETIKMVDRVYIISEGKVLAHGKPEEVVNN 224
>pir||D83356 probable ATP-binding component of ABC transporter PA2308 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9948341|gb|AAG05696.1|AE004657_3 (AE004657) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 282
Score = 142 bits (354), Expect = 6e-33
Identities = 81/207 (39%), Positives = 124/207 (59%), Gaps = 8/207 (3%)
Query: 1 MLRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
+L V+ VS +Y+ + +SF+V + F++LGPSG GK+ LL+ +AG I P EG
Sbjct: 16 LLAVDGVSLEYRTRSRVVRATQRVSFEVDPADRFVLLGPSGCGKSTLLKAVAGFITPSEG 75
Query: 56 RIILNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLR-RISRQEIDRKVKEI 114
I L G V + P++ + + L P TV N+ F L++ +++R E +R+ E
Sbjct: 76 EIRLQGQAVRAPGPDR--IVVFQEFDQLPPWKTVRQNVLFPLRVSGQVTRDEAERRADEC 133
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ +G+ P TLSGG K RVAIARAL ++P++LL+DEPFA LD T+ + E+
Sbjct: 134 LEKVGLAGFAEAYPHTLSGGMKARVAIARALAMQPKILLMDEPFAALDALTRRKMQEELL 193
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRV 201
+E+ FT L VTHS EEA+ +G+R+
Sbjct: 194 RLWEEVRFTLLFVTHSIEEALVVGNRI 220
>pir||H64716 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2314761|gb|AAD08616.1| (AE000655) ABC
transporter, ATP-binding protein (abc) [Helicobacter
pylori 26695]
Length = 327
Score = 140 bits (350), Expect = 2e-32
Identities = 76/242 (31%), Positives = 141/242 (57%), Gaps = 7/242 (2%)
Query: 1 MLRVESVSKDYKE--FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
++ ++++ K Y+ L+ ++ ++KK + ++G SGAGK+ L+ +I + P G ++
Sbjct: 2 VVELKNIEKIYENGFHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSSGEVL 61
Query: 59 LNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKE 113
+NGV++ P+ ++ + I Q + L V++N+AF L++ R + +I +V E
Sbjct: 62 VNGVNLLKLKPKELQKARQKIGMIFQHFNLLSAKNVFENVAFALEIARWEKNKIKSRVHE 121
Query: 114 ISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEM 173
+ +++G+E +H P+ LSGG+KQRVAIAR+L P+LLL DE + LD +T +T +
Sbjct: 122 LLELVGLEDKMHFYPKQLSGGQKQRVAIARSLANCPDLLLCDEATSALDSKTTHSILTLL 181
Query: 174 KVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGF 233
+K+L + + +TH E L +++ V+ G +V+ G V+E+F+NP LG
Sbjct: 182 SGIQKKLDLSIVFITHEIEVVKELCNQMCVISSGEIVERGSVEEIFANPKHAVTKELLGI 241
Query: 234 EN 235
N
Sbjct: 242 RN 243
>pir||G69803 ABC transporter (ATP-binding protein) homolog yfiL - Bacillus
subtilis >gi|1817536|dbj|BAA11402.1| (D78508) YfiL
[Bacillus subtilis] >gi|2633155|emb|CAB12660.1| (Z99108)
similar to ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 311
Score = 139 bits (347), Expect = 4e-32
Identities = 77/245 (31%), Positives = 139/245 (56%), Gaps = 12/245 (4%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
ML+ E++ K Y K+ ++ ISF +KK E F +LGP+GAGK+ + +I+G++ D G I +
Sbjct: 1 MLQAENIKKAYGKKTIVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVPHDSGNITV 60
Query: 60 NGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G + + K+ + +PQ+ AL+P +T ++N+ F K+ ++ E ++ E+ + +
Sbjct: 61 GGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHDEAKKRAAEVLEYV 120
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G+ K T SGG K+R+ I AL+ +PELL++DEP +D Q+++ + +K
Sbjct: 121 GLTERAKDKIETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVK-QLN 179
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
E G T ++ +H EE L DR+G++ +G ++ +G ++ S LG + II+
Sbjct: 180 ETGMTVIYTSHYMEEVEFLCDRIGIIDQGEMIAIGTKTDLCSR---------LGGDTIIQ 230
Query: 239 GVAKG 243
G
Sbjct: 231 LTVSG 235
>sp|P39459|NASD_KLEPN NITRATE TRANSPORT PROTEIN NASD >gi|2642137|gb|AAB86901.1| (L27431)
nitrate transporter ATPase component; NasD [Klebsiella
oxytoca]
Length = 262
Score = 138 bits (345), Expect = 7e-32
Identities = 79/226 (34%), Positives = 135/226 (58%), Gaps = 11/226 (4%)
Query: 1 MLRVESVSKDYK----EF-KLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
+++V+ VS+ + EF L+++SFD+ + E ++G SG GK+ LL +IAGI P EG
Sbjct: 4 LIQVQGVSQRFSTASGEFLALQNVSFDIYEGETISLIGHSGCGKSTLLNLIAGIALPTEG 63
Query: 56 RIILNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKL---RRISRQEIDRKVK 112
++ + ++ PE+ A + Q+++L P +T +DN+A + R +S+ E ++
Sbjct: 64 GLLCDNREIAGPGPER---AVVFQNHSLLPWLTCFDNVALAVDQVFRRSMSKGERKEWIE 120
Query: 113 EISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTE 172
+ + + H LH++P +SGG KQRV IARAL ++P++LLLDEPF LD T++
Sbjct: 121 HNLERVQMGHALHKRPGEISGGMKQRVGIARALAMKPKVLLLDEPFGALDALTRAHLQDA 180
Query: 173 MKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEV 218
+ ++ L T + +TH +EA+ L DRV +M G VG++ +V
Sbjct: 181 VMQIQQSLNTTIVMITHDVDEAVLLSDRVLMMTNGPAATVGEILDV 226
>gb|AAC45666.1| (AF010307) AbcC [Helicobacter pylori]
Length = 327
Score = 138 bits (344), Expect = 1e-31
Identities = 75/242 (30%), Positives = 141/242 (57%), Gaps = 7/242 (2%)
Query: 1 MLRVESVSKDYKE--FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
++ ++++ K Y+ L+ ++ ++KK + ++G SGAGK+ L+ +I + P G ++
Sbjct: 2 VVELKNIEKIYENGFHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSSGEVL 61
Query: 59 LNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKE 113
+NGV++ P+ ++ + I Q + L V++N+AF L++ R + +I +V E
Sbjct: 62 VNGVNLLKLKPKELQKARQKIGMIFQHFNLLSAKDVFENVAFALEIARWEKTKIKSRVHE 121
Query: 114 ISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEM 173
+ +++G+E +H P+ LSGG+K+RVAIAR+L P+LLL DE + LD +T +T +
Sbjct: 122 LLELVGLEDKVHFYPKQLSGGQKERVAIARSLANCPDLLLCDEATSALDSKTTHSILTLL 181
Query: 174 KVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGF 233
+K+L + + +TH E L +++ V+ G +V+ G V+E+F+NP LG
Sbjct: 182 SGIQKKLDLSVVFITHQIEVVKELCNQMCVISSGEIVERGSVEEIFANPKHAVTKELLGI 241
Query: 234 EN 235
N
Sbjct: 242 RN 243
>pir||F71800 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
J99) >gi|4156118|gb|AAD07069.1| (AE001570) abc
transporter, ATP-binding protein [Helicobacter pylori
J99]
Length = 327
Score = 138 bits (344), Expect = 1e-31
Identities = 75/242 (30%), Positives = 141/242 (57%), Gaps = 7/242 (2%)
Query: 1 MLRVESVSKDYKE--FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
++ ++++ K Y+ L+ ++ ++KK + ++G SGAGK+ L+ +I + P G ++
Sbjct: 2 VVELKNIEKIYENGFHALKGVNLELKKGDILGVIGYSGAGKSTLIRLINCLERPSSGEVL 61
Query: 59 LNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKE 113
+NGV++ + P+ ++ + I Q + L V++N+AF L++ R + +I +V E
Sbjct: 62 VNGVNLLNLKPKELQKARQKIGMIFQHFNLLSAKNVFENVAFALEIARWEKTKIKSRVHE 121
Query: 114 ISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEM 173
+ +++G+E +H P+ LSGG+KQRVAIAR+L P LLL DE + LD +T +T +
Sbjct: 122 LLELVGLEDKVHFYPKQLSGGQKQRVAIARSLANCPNLLLCDEATSALDSKTTHSILTLL 181
Query: 174 KVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGF 233
+K+ + + +TH E L +++ V+ G +V+ G V+E+F+NP LG
Sbjct: 182 SGIQKKFDLSIVFITHQIEVVKELCNQMCVISSGEIVERGSVEEIFANPKHAVTKELLGI 241
Query: 234 EN 235
+N
Sbjct: 242 KN 243
>pir||C82266 ABC transporter, ATP-binding protein VC0907 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9655363|gb|AAF94069.1| (AE004174) ABC transporter,
ATP-binding protein [Vibrio cholerae]
Length = 344
Score = 138 bits (344), Expect = 1e-31
Identities = 81/241 (33%), Positives = 137/241 (56%), Gaps = 10/241 (4%)
Query: 1 MLRVESVSK-----DYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
M+ ++SV+K D + L+DI+ + + F ++G SGAGK+ L+ + + +P G
Sbjct: 1 MIEIKSVNKVFYQGDKQIHALKDINLFIPQGTIFGVIGSSGAGKSTLIRCVNMLEKPTSG 60
Query: 56 RIILNGVDVTSYP-----PEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRK 110
++I++GVD+T+ +RN+ I Q + L TV++N+A L+L S+Q I+ K
Sbjct: 61 QVIVDGVDLTTLSNPQLCAARRNIGMIFQHFNLLSSRTVFENVALPLELAGQSQQHIETK 120
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
V E+ ++G+ P LSGG+KQRVAIARAL +P++LL DE + LD T +
Sbjct: 121 VTELLALVGLSEKRESYPANLSGGQKQRVAIARALASDPKVLLCDEATSALDPATTQSIL 180
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARF 230
+K ++L T L +TH + S+ V ++ G LV+ G V ++F++P E +F
Sbjct: 181 ELLKEINRQLNLTILLITHEMDVVKSICHEVAIIGGGELVEKGTVGDIFAHPKTELAHQF 240
Query: 231 L 231
+
Sbjct: 241 I 241
>sp|P44785|ABC_HAEIN ATP-BINDING PROTEIN ABC >gi|1073885|pir||C64082 ATP-binding protein
homolog HI0621 - Haemophilus influenzae (strain Rd
KW20) >gi|1573615|gb|AAC22280.1| (U32744) ABC
transporter, ATP-binding protein [Haemophilus influenzae
Rd]
Length = 345
Score = 136 bits (338), Expect = 5e-31
Identities = 79/241 (32%), Positives = 134/241 (54%), Gaps = 10/241 (4%)
Query: 1 MLRVESVSKDY-----KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
M+++ ++ K + K L ++S +++K + ++G SGAGK+ L+ + + +P G
Sbjct: 1 MIKLNNIXKIFELPXKKLTALDNVSLNIEKGQICGVIGASGAGKSTLIRCVNLLEKPTSG 60
Query: 56 RIILNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRK 110
+I++GV++T +R + I Q + L TV++N+A L+L S+ +I K
Sbjct: 61 SVIVDGVELTKLSDRELVLARRQIGMIFQHFNLLSSRTVFENVALPLELESESKAKIQEK 120
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
+ + ++G+ P LSGG+KQRVAIARAL +P++LL DE + LD T +
Sbjct: 121 ITALLDLVGLSEKRDAYPSNLSGGQKQRVAIARALASDPKVLLCDEATSALDPATTQSIL 180
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARF 230
+K + LG T L +TH E + D+V V+ +GRLV+ G V E+F+NP E F
Sbjct: 181 KLLKEINRTLGITILLITHEMEVVKQICDQVAVIDQGRLVEQGTVGEIFANPKTELAQEF 240
Query: 231 L 231
+
Sbjct: 241 I 241
>gb|AAA64722.1| (M20568) ORF 10 [Azotobacter vinelandii]
Length = 358
Score = 135 bits (337), Expect = 6e-31
Identities = 107/330 (32%), Positives = 166/330 (49%), Gaps = 23/330 (6%)
Query: 30 IILGPSGAGKTVLLEIIAGIIEPDEGRIILNGV---DVTSY-PPEKRNLAYIPQDYALFP 85
++LG SG+GKT LL IAG+ E EG + + G D T + PP +R+L Y+ Q L P
Sbjct: 32 VLLGRSGSGKTTLLRAIAGL-ERAEGFLQVGGQLWQDATCFRPPHQRSLGYVRQASELLP 90
Query: 86 HMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARAL 145
H+ V N+ FG RRI R + E+ + G+E LL ++ L G +QRVAIA AL
Sbjct: 91 HLDVRANLEFGY--RRIPRARRRLGLDEVIALFGLEDLLDQRAEWLPNGPRQRVAIACAL 148
Query: 146 VIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVML 205
+ P+LLLLD P LD ++++ + ++ R +L L+VTHS +E L D + ++
Sbjct: 149 LTSPDLLLLDAPLICLDRHSRAQILPALEQLRGQLRIPLLYVTHSQDEVTRLADHLILLD 208
Query: 206 RGRLVQVGDVKEVFSNP------VDEGVARFLGFENIIEGVAKGNILEANGVKIT----- 254
+G+ G + S+P DE +G + + + + G ++
Sbjct: 209 KGKTFASGPPGRLLSDPRLPLNHPDEAAVVLIGQVEHHDPHYRLSTVRVPGGTLSVSLSR 268
Query: 255 LPISVEGKVRIGVRPEDIILSTEPV-KTSARNEFRAEVIGI--EELGPLVRVNLKIGGIT 311
LP E +VRI R D+ LS +P +S N R + + E+ V V L +
Sbjct: 269 LPPGAETRVRIFAR--DVSLSLDPPHNSSILNILRVRIADLFHEQDSARVMVRLDLDSAC 326
Query: 312 LKAFITRSSLIELGISEGREVYVSFKTSAI 341
+ A ITR S LG++ G +VY K+ A+
Sbjct: 327 ILARITRLSADRLGLAPGLQVYAQIKSVAL 356
>gi|11499407 ABC transporter, ATP-binding protein [Archaeoglobus fulgidus]
>gi|7445943|pir||B69477 ABC transporter, ATP-binding
protein homolog - Archaeoglobus fulgidus
>gi|2648727|gb|AAB89431.1| (AE000977) ABC transporter,
ATP-binding protein [Archaeoglobus fulgidus]
Length = 231
Score = 134 bits (335), Expect = 1e-30
Identities = 83/223 (37%), Positives = 126/223 (56%), Gaps = 17/223 (7%)
Query: 1 MLRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
MLR+E V K Y+ K LR I+ ++++ E ++LGPSG GKT +L II GI P G
Sbjct: 1 MLRLEDVWKVYQMGKVEVSALRGINLEIERGEFMVVLGPSGCGKTTMLNIIGGIDRPTRG 60
Query: 56 RIILNGVDVTSYPPEK------RNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDR 109
R+I +G D+T+Y ++ N+ +I Q + L P +T +N+ L E R
Sbjct: 61 RVIFDGKDITNYNEDRLTMHRRNNVGFIFQFFNLIPTLTARENVEIAADL-----VESPR 115
Query: 110 KVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRF 169
V E+ K++G+ P LSGGE+QRVAIARALV P ++L DEP +LD +T
Sbjct: 116 DVDEVLKMVGLADRAEHFPAELSGGEQQRVAIARALVKNPPIILADEPTGSLDFETGKAV 175
Query: 170 MTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQV 212
+ M+ ++ G T + VTH+ A ++ DRV + G++ +V
Sbjct: 176 LKVMREINRKEGITFVLVTHNSAIA-AIADRVVYLRDGKVERV 217
>sp|P45073|YHBG_HAEIN PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN HI1148
>gi|1074660|pir||I64167 hypothetical protein HI1148 -
Haemophilus influenzae (strain Rd KW20)
>gi|1574704|gb|AAC22803.1| (U32794) ABC transporter,
ATP-binding protein [Haemophilus influenzae Rd]
Length = 241
Score = 134 bits (333), Expect = 2e-30
Identities = 78/241 (32%), Positives = 139/241 (57%), Gaps = 16/241 (6%)
Query: 1 MLRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L E+++K YK K+ D+S V E +LGP+GAGKT ++ G++ D+G+I++
Sbjct: 3 ILTAENLAKSYKSRKVVSDVSLTVNSNEIVGLLGPNGAGKTTTFYMVVGLVRQDQGKIVI 62
Query: 60 NGVDVTSYPPE---KRNLAYIPQDYALFPHMTVYDNIAFGLKLRR-ISRQEIDRKVKEIS 115
+G D++ P +R + Y+PQ+ ++F +TVY+N+ L++R+ ++ Q+ K E+
Sbjct: 63 DGEDISLLPMHNRAQRGIGYLPQEASIFRRLTVYENLMAVLEIRKDLTPQQRREKADELI 122
Query: 116 KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLD---VQTKSRFMTE 172
+ I H+ + LSGGE++RV IARAL P+ +LLDEPFA +D V + +T+
Sbjct: 123 EEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDIKKIITD 182
Query: 173 MKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVAR-FL 231
+ + G L H+ E + + +R ++ G+++ G ++V + DE V R +L
Sbjct: 183 L----RNRGLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQVMN---DEQVKRVYL 235
Query: 232 G 232
G
Sbjct: 236 G 236
>pir||G71363 probable amino acid ABC transporter, ATP-binding protein (abc) -
syphilis spirochete >gi|3322384|gb|AAC65110.1|
(AE001197) amino acid ABC transporter, ATP-binding
protein (abc) [Treponema pallidum]
Length = 269
Score = 134 bits (333), Expect = 2e-30
Identities = 80/228 (35%), Positives = 127/228 (55%), Gaps = 6/228 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+R+E + K Y LRDIS ++ + I+G SGAGK+ LL I++ + +PDEG +
Sbjct: 1 MVRLERLKKTYAGVPILRDISLEIPAHGMYGIIGKSGAGKSTLLRIMSLLEKPDEGAVFY 60
Query: 60 NGVDV-----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEI 114
+ V + ++R + I Q + LF TV+ N+A+ L++ R +R++ +V +
Sbjct: 61 HTTRVDLLRGAALRAQRRRIGLIFQQFHLFSSRTVFGNVAYPLEIARYARKDAYARVLHL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
++G+ + TLSGG+KQRVAIARAL EP +L DE + LD QT +T +K
Sbjct: 121 LHLVGLADKAQARISTLSGGQKQRVAIARALAAEPAILFCDEATSALDPQTTQSILTLLK 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNP 222
+ L T + +TH E L DR V+ G +V+ G V ++F+ P
Sbjct: 181 NVQCSLRLTVVLITHQMEVVRDLCDRAAVLHEGEIVEEGRVTQLFAAP 228
>pir||D70020 ABC transporter (ATP-binding protein) homolog yusC - Bacillus
subtilis >gi|2635771|emb|CAB15264.1| (Z99120) similar to
ABC transporter (ATP-binding protein) [Bacillus
subtilis]
Length = 341
Score = 133 bits (332), Expect = 2e-30
Identities = 80/241 (33%), Positives = 131/241 (54%), Gaps = 10/241 (4%)
Query: 1 MLRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
M+ ++ VSK YK ++++S +KK E F I+G SGAGK+ L+ ++ G+ +P G
Sbjct: 1 MINLQDVSKVYKSKHGDVNAVQNVSLSIKKGEIFGIIGYSGAGKSSLIRLLNGLEKPTSG 60
Query: 56 RIILNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRK 110
+ + G + + ++ I Q + L TV DNI F L++ + + E ++
Sbjct: 61 TVEVAGTKINEVNGRGLRKARHEISMIFQHFNLLWSRTVRDNIMFPLEIAGVKKSERIKR 120
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
E+ K++G+E P LSGG+KQRV IARAL P++LL DE + LD QT +
Sbjct: 121 ANELIKLVGLEGKEKSYPSQLSGGQKQRVGIARALANNPKVLLCDEATSALDPQTTDSIL 180
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARF 230
+ + LG T + +TH + +RV VM G++V+ G+V +VF NP ++ RF
Sbjct: 181 DLLSDINERLGLTIVLITHEMHVIRKICNRVAVMENGKVVEEGEVLDVFKNPKEQMTKRF 240
Query: 231 L 231
+
Sbjct: 241 V 241
>sp|P27675|GLNQ_BACST GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ >gi|98203|pir||A42478
glutamine transport protein glnQ - Bacillus
stearothermophilus >gi|142988|gb|AAA22483.1| (M61017)
membrane transport protein [Bacillus stearothermophilus]
Length = 242
Score = 132 bits (330), Expect = 4e-30
Identities = 83/237 (35%), Positives = 130/237 (54%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ V+K Y +F L+DI+ + + E +I+GPSG+GK+ L+ I + G +I+
Sbjct: 1 MIYFHQVNKYYGDFHVLKDINLTIHQGEVVVIIGPSGSGKSTLVRCINRLETISSGELIV 60
Query: 60 NGVDVTSYPPE----KRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
+ V V + +RN+ + Q + L+PHMTV NI +K+ RI +E
Sbjct: 61 DNVKVNDKHIDINQLRRNIGMVFQHFNLYPHMTVLQNITLAPMKVLRIPEKEAKETAMYY 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ +GI + P LSGG++QRVAIAR L ++P+++L DEP + LD +T + MK
Sbjct: 121 LEKVGIPDKANAYPSELSGGQQQRVAIARGLAMKPKIMLFDEPTSALDPETIGEVLDVMK 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
KE G T + VTH A + DR+ M +GR+++ +E FSNP +E FL
Sbjct: 181 QLAKE-GMTMVVVTHEMGFAREVADRIVFMDQGRILEEAPPEEFFSNPKEERAKVFL 236
>pir||S75100 ABC transport protein - Synechocystis sp. (strain PCC 6803)
>gi|1653045|dbj|BAA17962.1| (D90910) ABC transporter
[Synechocystis sp.]
Length = 218
Score = 132 bits (329), Expect = 5e-30
Identities = 84/215 (39%), Positives = 116/215 (53%), Gaps = 7/215 (3%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+RVE VSK Y LR + + ILG SG+GKT LL +IAG+ D G I L
Sbjct: 1 MIRVEQVSKTYGSVAVLRQLCLTIPPGGKTAILGRSGSGKTTLLRLIAGLDRLDGGEIYL 60
Query: 60 NGVDVTS----YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEIS 115
V+ PP +R + ++ Q AL+PH+TV NIAFGL +S+ E +++ +
Sbjct: 61 GDRQVSCPQHYLPPHQRGIGFVFQSPALWPHLTVQQNIAFGLA--HLSKTEQQERIEPLL 118
Query: 116 KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
L I L+ R P LSGGE +RVA AR L P LLLDEP +NLD K +T ++
Sbjct: 119 ARLAIAPLIDRYPHQLSGGEAKRVAFARTLAPRPPFLLLDEPLSNLDQGLKEELLTYLQD 178
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLV 210
+ +L+VTH EA L + ++ G+LV
Sbjct: 179 YLDFTQACTLYVTHDLAEAQFLTSDIQLLRDGQLV 213
>pir||G71905 probable ABC transporter, ATP-binding protein - Helicobacter pylori
(strain J99) >gi|4155205|gb|AAD06229.1| (AE001497)
putative abc transporter, ATP-binding protein
[Helicobacter pylori J99]
Length = 240
Score = 131 bits (327), Expect = 9e-30
Identities = 78/228 (34%), Positives = 129/228 (56%), Gaps = 11/228 (4%)
Query: 1 MLRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L+ E ++K K+ K+ D+S +VK E +LGP+GAGKT +I G++EP G + L
Sbjct: 3 ILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSVYL 62
Query: 60 NGVDVTSYPPEKRN---LAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
N VD+ YP KR+ + Y+PQ+ ++F ++V +N+A + + +E + K++ +
Sbjct: 63 NDVDLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESLLD 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLD---VQTKSRFMTEM 173
I+ + RK +LSGGE++RV IARAL+ P+ +LLDEPFA +D V R + +
Sbjct: 123 AFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQRIIESL 182
Query: 174 KVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSN 221
L L H+ E +S+ R V+ G L+ G+ E++ N
Sbjct: 183 ----IGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEIYEN 226
>pir||F71849 amino acid ABC transporter, ATP-binding protein - Helicobacter
pylori (strain J99) >gi|4155696|gb|AAD06680.1|
(AE001537) AMINO ACID ABC TRANSPORTER, ATP-BINDING
PROTEIN [Helicobacter pylori J99]
Length = 248
Score = 131 bits (327), Expect = 9e-30
Identities = 75/237 (31%), Positives = 134/237 (55%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L + + K Y+ + D I+F + K E +ILGPSG GK+ L+ + G+ + DEG I+
Sbjct: 4 ILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEKIDEGEILF 63
Query: 60 NGVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
++ T++ ++ + + Q+Y LFPH+ V DNI LK+++ S+ E+ + E+
Sbjct: 64 ENTNLNTPSTNWNQMRQKIGMVFQNYELFPHLNVLDNILLAPLKVQKRSKDEVLSQAVEL 123
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
K +G+EH P+ LSGG+KQRVAI R+L + P+++L DE A+LD + + E+
Sbjct: 124 LKRVGLEHKQQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEMVKEVL-EVI 182
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
+ + G + + VTH + A + ++ G++ + KE F++P + +FL
Sbjct: 183 LELAKTGMSMVIVTHEMKFAQKIASKIVFFDSGKIAEENSAKEFFNHPKSQRAQKFL 239
>pir||D81435 probable iron-uptake ABC transport system ATP-binding protein
Cj0173c [imported] - Campylobacter jejuni (strain NCTC
11168) >gi|6967666|emb|CAB72656.1| (AL139074) putative
iron-uptake ABC transport system ATP-binding protein
[Campylobacter jejuni]
Length = 302
Score = 131 bits (327), Expect = 9e-30
Identities = 101/328 (30%), Positives = 167/328 (50%), Gaps = 34/328 (10%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
ML ++++SK++ + + L +I+ VK+ E ILG SG+GK+ LL IIA + +
Sbjct: 2 MLEIKNLSKNFGKIQALENINLHVKEGEFLSILGGSGSGKSTLLRIIAKLEQA------- 54
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
+ D+ S K +A + Q+YALFPH+ V NI F L +++ ++ + + K
Sbjct: 55 SSYDLFSC---KGEVALMFQNYALFPHLNVEKNILFAL----YDKKDKNQILNHLLKTFE 107
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKE 179
IE L ++K +SGG+ QRVA ARA+ +LLLLDEPF+NLD K E+K +
Sbjct: 108 IEDLRYKKIDEISGGQAQRVAFARAMARGCKLLLLDEPFSNLDQNLKQDLRRELKKMIEN 167
Query: 180 LGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEG 239
G T++ VTH E+A + D++ + +G+++ + KE++ P D A+ L NIIE
Sbjct: 168 QGITAIMVTHDIEDAYCMSDQIAFLEKGKILAHANPKELYFKP-DFKSAQILPDLNIIEE 226
Query: 240 VAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGP 299
+ +E + + ++ I +K N F A+++ E LG
Sbjct: 227 ----------------KLDLEDEFFAWIASKNYIFGYAELKIG--NRFEAKILQKEFLGA 268
Query: 300 LVRVNLKIGGITLKAFITRSSLIELGIS 327
R+ L I ++ S +E IS
Sbjct: 269 FCRLKLLYKNIIFFILVSSSYDLEEKIS 296
>gb|AAB49429.1| (U73111) glutamine transport ATP-binding protein GLNQ [Salmonella
typhimurium]
Length = 240
Score = 131 bits (326), Expect = 1e-29
Identities = 75/237 (31%), Positives = 136/237 (56%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ ++VSK + + L +I ++++ E +I+GPSG+GK+ LL I + E G +I+
Sbjct: 1 MIEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60
Query: 60 NGVDVTSYPPEKRNL----AYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
+G+ V ++R + + Q + LFPH+T +N+ FG L++R + ++E +++ K +
Sbjct: 61 DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGVKKEEAEKQAKAL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+G+ H P LSGG++QRVAIARAL ++P+++L DEP + LD + + + M+
Sbjct: 121 LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQ 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
+E G T + VTH A + R+ + +GR+ + G + + NP + FL
Sbjct: 181 DLAEE-GMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGSPQALIENPPSPRLQEFL 236
>pir||C64609 ABC transporter, ATP-binding protein - Helicobacter pylori (strain
26695) >gi|2313839|gb|AAD07765.1| (AE000584) ABC
transporter, ATP-binding protein [Helicobacter pylori
26695]
Length = 240
Score = 131 bits (325), Expect = 2e-29
Identities = 76/227 (33%), Positives = 129/227 (56%), Gaps = 9/227 (3%)
Query: 1 MLRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L+ E ++K K+ K+ D+S +VK E +LGP+GAGKT +I G++EP G + L
Sbjct: 3 ILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSVYL 62
Query: 60 NGVDVTSYPPEKRN---LAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
N V++ YP KR+ + Y+PQ+ ++F ++V +N+A + + +E + K++ +
Sbjct: 63 NDVNLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESLLD 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
I+ + RK +LSGGE++RV IARAL+ P+ +LLDEPFA +D + K+
Sbjct: 123 AFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVD---PIAVIDIQKII 179
Query: 177 RKELGFT--SLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSN 221
+G L H+ E +S+ R V+ G L+ G+ E++ N
Sbjct: 180 ESLIGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEIYEN 226
>emb|CAB60755.1| (Y18641) ATP-binding protein [Staphylococcus aureus]
>gi|9501787|dbj|BAB03336.1| (AB035452) ABC transporter
[Staphylococcus aureus]
Length = 252
Score = 131 bits (325), Expect = 2e-29
Identities = 80/233 (34%), Positives = 131/233 (55%), Gaps = 15/233 (6%)
Query: 1 MLRVESVSKDYKEFK----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGR 56
+L V+ VSK Y + L+DI+FD++K E I+GPSG+GKT LL +++ I + G
Sbjct: 3 ILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSGKTTLLNVLSSIDQISSGS 62
Query: 57 IILNGVDVTSYPPE------KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRK 110
+I NG ++ + K +L +I QDY++ P +TV +NI L ++++S+ ++
Sbjct: 63 VIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVKENIMLPLSVQKMSKATMEEN 122
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
K I+ LGI L ++ P LSGG++QR A ARA V +P+++ DEP LD ++ + +
Sbjct: 123 YKAITTALGIYDLGNKYPSELSGGQQQRTAAARAFVHKPQIIFADEPTGALDSKSANDLL 182
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRG----RLVQVGDVKEVF 219
++ K T + VTH A S +RV ++ G +L Q G K+ F
Sbjct: 183 QRLEEMNKSFDTTIVMVTHD-PVAASFAERVIMLKDGQIHTQLYQEGRSKQAF 234
>pir||C82957 probable ATP-binding component of ABC transporter PA5503 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9951839|gb|AAG08888.1|AE004963_1 (AE004963) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 335
Score = 131 bits (325), Expect = 2e-29
Identities = 85/242 (35%), Positives = 128/242 (52%), Gaps = 11/242 (4%)
Query: 1 MLRVESVSKDYKEF-----KLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
M+ V K Y+ L+ +++ + F ++G SGAGK+ LL +I + EP G
Sbjct: 1 MIEFHDVHKTYRVAGREIPALQPTRLNIQAGQIFGLIGHSGAGKSTLLRLINRLEEPSGG 60
Query: 56 RIILNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRR-ISRQEIDR 109
RI++ G DVT+ E ++ + I Q + L TV DNIA L+L SR E+D
Sbjct: 61 RILVEGEDVTALDAEGLRRFRQRVGMIFQHFNLLSSKTVADNIAMPLRLAGGFSRAEVDA 120
Query: 110 KVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRF 169
+V E+ +G+ + P LSGG+KQRV IARAL P +LL DE + LD QT +
Sbjct: 121 RVSELLARVGLSDHARKYPAQLSGGQKQRVGIARALACRPSILLCDEATSALDPQTTASV 180
Query: 170 MTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVAR 229
+ + +EL T + +TH + + D+V VM G +V+ GDV +VF +P R
Sbjct: 181 LQLLAEINRELKLTIVLITHEMDVIRRVCDQVAVMDGGAIVEQGDVADVFLHPQHPTTRR 240
Query: 230 FL 231
F+
Sbjct: 241 FV 242
>sp|P54537|YQIZ_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN IN
BMRU-ANSR INTERGENIC REGION >gi|7442518|pir||H69962
ABC-type transport protein yqiZ - Bacillus subtilis
>gi|1303951|dbj|BAA12606.1| (D84432) YqiZ [Bacillus
subtilis] >gi|2634830|emb|CAB14327.1| (Z99116) similar
to amino acid ABC transporter (ATP-binding protein)
[Bacillus subtilis]
Length = 240
Score = 130 bits (324), Expect = 2e-29
Identities = 79/237 (33%), Positives = 132/237 (55%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M++VE +SK + K L++IS + + E ++GPSG+GK+ L + + +P+ G I +
Sbjct: 1 MIKVEKLSKSFGKHEVLKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLLEKPNGGTITI 60
Query: 60 NGVDVTSYPPE----KRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
++T + N+ + Q + LFPH TV +NI + + +++ S+Q K +++
Sbjct: 61 KDTEITKPKTNTLKVRENIGMVFQHFHLFPHKTVLENIMYAPVNVKKESKQAAQEKAEDL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ +G+ + P LSGG+KQRVAIARAL + P+++L DEP + LD + + MK
Sbjct: 121 LRKVGLFEKRNDYPNRLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVKEVLQVMK 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
E G T + VTH A + DRV M +G +V+ G+ KE F +P + FL
Sbjct: 181 E-LVETGMTMVIVTHEMGFAKEVADRVLFMDQGMIVEDGNPKEFFMSPKSKRAQDFL 236
>sp|P10346|GLNQ_ECOLI GLUTAMINE TRANSPORT ATP-BINDING PROTEIN GLNQ >gi|72464|pir||QRECGQ
glutamine transport protein glnQ - Escherichia coli
>gi|581098|emb|CAA32384.1| (X14180) GlnQ (AA 1-240); gtg
start [Escherichia coli] >gi|1651363|dbj|BAA35481.1|
(D90718) Glutamine transport protein GlnQ. [Escherichia
coli] >gi|1651369|dbj|BAA35491.1| (D90719) Glutamine
transport protein GlnQ. [Escherichia coli]
>gi|1787029|gb|AAC73896.1| (AE000183) ATP-binding
component of glutamine high-affinity transport system
[Escherichia coli K12]
Length = 240
Score = 130 bits (323), Expect = 3e-29
Identities = 75/237 (31%), Positives = 137/237 (57%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ ++VSK + + L +I ++ + E +I+GPSG+GK+ LL I + E G +I+
Sbjct: 1 MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60
Query: 60 NGVDVTSYPPEKRNL----AYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
+G+ V ++R + + Q + LFPH+T +N+ FG L++R +++E ++ +E+
Sbjct: 61 DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLAREL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+G+ H P LSGG++QRVAIARAL ++P+++L DEP + LD + + + M+
Sbjct: 121 LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQ 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
+E G T + VTH A + R+ + +GR+ + G+ + + NP + + FL
Sbjct: 181 DLAEE-GMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGNPQVLIKNPPSQRLQEFL 236
>sp|P42423|YXDL_BACSU HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN IN IDH 3'REGION
>gi|7445619|pir||A70074 ABC transporter (ATP-binding
protein) homolog yxdL - Bacillus subtilis
>gi|709993|dbj|BAA03302.1| (D14399) hypothetical protein
[Bacillus subtilis] >gi|1408484|dbj|BAA08315.1| (D45912)
homologous to FtsE protein of E. coli, belonging to the
ATP-binding-cassette (ABC) family [Bacillus subtilis]
>gi|2636510|emb|CAB16000.1| (Z99124) similar to ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 257
Score = 129 bits (321), Expect = 5e-29
Identities = 86/265 (32%), Positives = 143/265 (53%), Gaps = 23/265 (8%)
Query: 1 MLRVESVSKDYKEF----KLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGR 56
ML V+ ++K YK L+ ISF +++ E ++GPSG+GKT LL II+ I PD G
Sbjct: 4 MLEVKHINKTYKGQVSYQALKQISFSIEEGEFTAVMGPSGSGKTTLLNIISTIDRPDSGD 63
Query: 57 IILNGVDVTSYPPEK------RNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRK 110
I++NG + K + L ++ QD+ L +T+ +NI L L + + ++ K
Sbjct: 64 ILINGENPHRLKRTKLAHFRRKQLGFVFQDFNLLDTLTIGENIMLPLTLEKEAPSVMEEK 123
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
+ I+ LGIE+LL+++ +SGG++QR AIARA++ +P L+L DEP NLD + M
Sbjct: 124 LHGIAAKLGIENLLNKRTFEVSGGQRQRAAIARAVIHKPSLILADEPTGNLDSKATKDVM 183
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARF 230
++ ++ T+L VTH D V R++ + DV V N + G R
Sbjct: 184 ETLQSLNRDDHVTALMVTH---------DPVSASYCRRVIFIKDV--VLFNEIYRGENRQ 232
Query: 231 LGFENIIE--GVAKGNILEANGVKI 253
+ +E I++ + GN + + V++
Sbjct: 233 VFYEQILDVLSMLGGNANDLSSVRL 257
>pir||H72301 ABC transporter, ATP-binding protein - Thermotoga maritima (strain
MSB8) >gi|4981596|gb|AAD36131.1|AE001765_10 (AE001765)
ABC transporter, ATP-binding protein [Thermotoga
maritima]
Length = 236
Score = 129 bits (321), Expect = 5e-29
Identities = 64/225 (28%), Positives = 131/225 (57%), Gaps = 5/225 (2%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+LR E++ K + + + + ++ + + E +LGP+GAGKT + +I G++ P G+II
Sbjct: 3 VLRCENLKKRFGRRYVVNGVNLEFHRGEIVGLLGPNGAGKTTIFNMILGVVVPTSGKIIF 62
Query: 60 NGVDVTSYPPEKR---NLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
VD+T +P +R + Y+ Q+ ++F +TV +NI L+ +++ +RK++E+
Sbjct: 63 RDVDITKFPVYRRARLGITYLQQETSIFGGLTVRENIDLVLRFHEKDKEKRERKIEELLH 122
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVW 176
++HL ++ LSGGEK+++ +AR + + P +LLDEPF+ +D +T + +M +
Sbjct: 123 EFHLKHLENQPASFLSGGEKRKLELARMMCLNPAFILLDEPFSGIDPKTVKE-IQKMTLE 181
Query: 177 RKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSN 221
K+ F + H+ +E + + DR+ V+ +G ++ G + + +
Sbjct: 182 LKQKNFGIVITDHNVDELVEIADRIYVIYKGEILAEGSPERILED 226
>pir||D72492 probable ABC transporter ATP-binding protein APE2579 - Aeropyrum
pernix (strain K1) >gi|5106285|dbj|BAA81596.1|
(AP000064) 333aa long hypothetical ABC transporter
ATP-binding protein [Aeropyrum pernix]
Length = 333
Score = 129 bits (320), Expect = 6e-29
Identities = 99/319 (31%), Positives = 155/319 (48%), Gaps = 21/319 (6%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ E + KDY F+ D +SF + + E F +LGP+GAGKT +++++ ++ P G +
Sbjct: 9 MVVAEELVKDYGGFRAVDGVSFRIARGELFSLLGPNGAGKTTTIKMLSTLLRPTSGEAWI 68
Query: 60 NGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G + P +R + +PQD M+ +DN+ +L + E + +E+ L
Sbjct: 69 AGYSIVREPGNVRRVIGLVPQDLTADDEMSGWDNVYIQARLYGLPSSEARERTREVLDYL 128
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWR- 177
+ HR+ T SGG ++++ IA +LV P++L LDEP LDV ++ +WR
Sbjct: 129 DLMEAAHRRVATYSGGMRRKLEIAMSLVHSPKVLFLDEPTLGLDVHSR------RSLWRY 182
Query: 178 ----KELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGF 233
K T L TH EEA L DRV ++ RGR+V G +E+ + E V L
Sbjct: 183 IEDLKRSAVTILLTTHYMEEAEMLSDRVAIIDRGRIVAEGTPEELKARVKGETVYIELKD 242
Query: 234 ENIIEGVAKGNILEANGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIG 293
E + + E G++ P VEGKV + V D +L P A N F + I
Sbjct: 243 PEYTEPLVLA-LKEKLGLE---PSVVEGKVAVRVDRADTLL---PELARALNGFPVKAIS 295
Query: 294 IEELGPLVRVNLKIGGITL 312
I L V +++ G TL
Sbjct: 296 ITR-ATLEDVFIELTGRTL 313
>pir||B75076 daunorubicin resistance ATP-binding protein drra PAB1703 -
Pyrococcus abyssi (strain Orsay)
>gi|5458423|emb|CAB49911.1| (AJ248286) DAUNORUBICIN
RESISTANCE ATP-BINDING PROTEIN DRRA [Pyrococcus abyssi]
Length = 314
Score = 129 bits (320), Expect = 6e-29
Identities = 76/224 (33%), Positives = 128/224 (56%), Gaps = 6/224 (2%)
Query: 1 MLRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
+L V+SV+K + K + ++SF E ILGP+GAGKT L +IA I PD G
Sbjct: 3 ILEVKSVTKKFPTPKGEVIAVNNVSFSANSGEVLGILGPNGAGKTTTLRMIATIYRPDSG 62
Query: 56 RIILNGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEI 114
++++G+D P E ++ +AY+ Q+ L P ++V D I + + R S+++ + ++I
Sbjct: 63 EVLVDGIDAVKNPLEVRKRIAYMTQEPDLTPPLSVRDYIIYYFRFRGFSKRDAKKHCEDI 122
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
++ G++ H+KP LS G K+RV +A AL + L+ LDEP A +D ++K + +K
Sbjct: 123 LELFGLKTHAHKKPFQLSTGLKRRVQLACALSSDVPLVFLDEPTAGVDPRSKRKTWELIK 182
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEV 218
++ G T + +H E L DRV +M +G++V G KE+
Sbjct: 183 EKLEDKGVTVILTSHDLYEVEYLADRVIIMNQGKIVAEGSPKEL 226
>dbj|BAB05817.1| (AP001514) ABC transporter (ATP-binding protein) (daunorubicin
resistance) [Bacillus halodurans]
Length = 310
Score = 129 bits (320), Expect = 6e-29
Identities = 65/222 (29%), Positives = 131/222 (58%), Gaps = 2/222 (0%)
Query: 1 MLRVESVSKDYK-EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
ML ++ K +K + +++++ + E +LGP+GAGK+ + +I+ +I+P G I L
Sbjct: 1 MLETINLCKTFKGQPAVQEVNMYLNSGESVGLLGPNGAGKSTTISMISTLIKPTSGEIKL 60
Query: 60 NGVDVTSYPPEKRN-LAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
NG+++ S+P + R L +PQ+ AL+ ++ Y+N+ F ++ + ++ +++ +++
Sbjct: 61 NGINIISHPGDIRKILGVVPQELALYQELSAYENLKFFGSTYKMKGKHLENRIQHALEIV 120
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G++ +T SGG K+R+ IA AL+ EP++L+LDEP +D Q+++ + ++ +
Sbjct: 121 GLKDRQKDLVKTFSGGMKRRINIAAALLHEPKILILDEPTVGIDPQSRNHILETVRTLNE 180
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFS 220
G T L+ +H EE L DR+ +M G ++ G +E+ S
Sbjct: 181 NEGTTVLYTSHYMEEVEQLCDRLYIMDHGEIIAAGTKEELLS 222
>sp|P47433|Y187_MYCGE HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG187
>gi|1361456|pir||G64220 ATP-binding protein msmK homolog
- Mycoplasma genitalium >gi|3844784|gb|AAC71406.1|
(U39698) ABC transporter, ATP-binding protein
[Mycoplasma genitalium]
Length = 585
Score = 128 bits (319), Expect = 8e-29
Identities = 83/237 (35%), Positives = 141/237 (59%), Gaps = 13/237 (5%)
Query: 97 LKLRRIS-RQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLD 155
+K R +S +Q I++ E++ L I +L ++P +SGG++QRVAIARA+V P+LLL+D
Sbjct: 333 IKTRIVSIKQFINKTALEVANKLAITKILTKRPDKISGGQQQRVAIARAIVRRPKLLLMD 392
Query: 156 EPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDV 215
EP +NLD + + + ++ +++EL T++ VTH EEA+S+ D + M G++ Q+G
Sbjct: 393 EPLSNLDAKLRVQTRQWIRQFQQELQITTVFVTHDQEEAMSISDVIVCMSTGKVQQIGTP 452
Query: 216 KEVFSNPVDEGVARFLGFE--NIIEGVAKGNILEANG---VKITLPISVEGKVRIGVRPE 270
E++ P +E VARFLG NIIE K N L N V + ++VE K+ +G R E
Sbjct: 453 SELYLKPANEFVARFLGTPEMNIIECSVKNNQLFWNNHLLVTESFKLNVE-KLLVGFRYE 511
Query: 271 DIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELGIS 327
++++T ++ +A++I IE LG + + + TL + +S +++G S
Sbjct: 512 QLVVTTN------KSSLQAKLINIENLGKHLVATISLFDTTLSMRLELNSHLKVGDS 562
Score = 90.9 bits (222), Expect = 2e-17
Identities = 41/97 (42%), Positives = 66/97 (67%), Gaps = 1/97 (1%)
Query: 2 LRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ ++++ D+ E + +I+ V+K + +LGPSG GKT L +IAG+I+P G+++ N
Sbjct: 8 IELKNIVVDFGESVAIDNINLSVEKHQLVSLLGPSGCGKTTTLAVIAGLIKPTSGQVLFN 67
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGL 97
G DVT PP++R L + Q+YAL+PHM V++NI F L
Sbjct: 68 GYDVTKKPPQERKLGLVFQNYALYPHMNVFENIVFPL 104
>pir||F82386 amino acid ABC transporter, ATP-binding protein VCA1037 [imported]
- Vibrio cholerae (group O1 strain N16961)
>gi|9658480|gb|AAF96931.1| (AE004429) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 239
Score = 128 bits (319), Expect = 8e-29
Identities = 82/234 (35%), Positives = 130/234 (55%), Gaps = 6/234 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII- 58
++ VSK Y +F+ L+ IS V K E +I GPSG+GK+ L+ + G+ D G II
Sbjct: 3 VIEFHQVSKWYGQFQALKSISLTVNKGEIVVICGPSGSGKSTLIRTVNGLESIDSGEIIV 62
Query: 59 LNGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEISKV 117
L +D + K + + Q + LFPH+TV +N+ ++ ++S QE + +
Sbjct: 63 LPELDERTRRSGKIGMVF--QHFNLFPHLTVLENLTLAPIRTLKLSAQEAKERAYHFLQR 120
Query: 118 LGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWR 177
+ I H+ P LSGG++QRVAIAR+L ++PE+LL DEP + LD +T + + E+ V
Sbjct: 121 VKITDQTHKYPIQLSGGQQQRVAIARSLCMQPEILLFDEPTSALDPETINEVL-EVMVDL 179
Query: 178 KELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
+ G T + VTH A + RV M G +++VG +++F NP +FL
Sbjct: 180 AQDGITMMCVTHEMGFARKVAHRVMFMDEGEILEVGSPEQLFQNPTHPRTQQFL 233
>pir||C64666 glutamine transport protein glnQ - Helicobacter pylori (strain
26695) >gi|2314330|gb|AAD08217.1| (AE000623) glutamine
ABC transporter, ATP-binding protein (glnQ)
[Helicobacter pylori 26695]
Length = 248
Score = 128 bits (318), Expect = 1e-28
Identities = 73/237 (30%), Positives = 134/237 (55%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L + + K Y+ + D I+F + K E +ILGPSG GK+ L+ + G+ + +EG I+
Sbjct: 4 ILETKGLKKTYQNHLVLDGINFTLNKGEVAVILGPSGCGKSTFLKCLNGLEKINEGEILF 63
Query: 60 NGVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
++ T++ ++ + + Q+Y LFPH+ V DNI +K+++ S+ E+ + E+
Sbjct: 64 ENTNLNNKATNWNQMRQKIGMVFQNYELFPHLNVLDNILLAPMKVQKRSKDEVISQAIEL 123
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
K +G+EH P+ LSGG+KQRVAI R+L + P+++L DE A+LD + + E+
Sbjct: 124 LKRVGLEHKQQAYPKELSGGQKQRVAIVRSLCMRPKIMLFDEVTASLDPEMVKEVL-EVI 182
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
+ G + + VTH + A + ++ G++ + + KE F++P + +FL
Sbjct: 183 LELATTGMSMVIVTHEMKFAQKIAHKIVFFDSGKIAEENNAKEFFNHPKSQRAQKFL 239
>gb|AAC05643.1| (AF033673) unknown [Pseudomonas marginalis pv. alfalfae]
Length = 254
Score = 127 bits (316), Expect = 2e-28
Identities = 74/237 (31%), Positives = 137/237 (57%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+++++ V+K Y +F L+DI+ +VK+ E ++ GPSG+GK+ + + + E +GRI++
Sbjct: 14 IIQMQGVNKWYGQFHVLKDINLNVKQGERIVLCGPSGSGKSTTIRCLNRLEEHQQGRIVV 73
Query: 60 NGVDVTSYPPE----KRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
+GV++T+ + +R + + Q + LFPH+T+ N + +R++ +++ +
Sbjct: 74 DGVELTNDLKQIEAIRREVGMVFQHFNLFPHLTILQNCTLAPMWVRKMPKRKAEEIAMHY 133
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ + I H+ P LSGG++QRVAIARAL ++P+++L DEP + LD + + M
Sbjct: 134 LERVRIPEQAHKFPGQLSGGQQQRVAIARALCMKPKIMLFDEPTSALDPEMVKEVLDTM- 192
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
+ E G T L VTH A ++ +RV M +G +V+ + F NP ++ FL
Sbjct: 193 IGLAEDGMTMLCVTHEMGFARTVANRVIFMDKGEIVEQAAPNDFFDNPQNDRTKLFL 249
>pir||E81936 probable amino acid permease ATP-binding protein NMA0900 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379613|emb|CAB84178.1| (AL162754) putative amino
acid permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 242
Score = 127 bits (315), Expect = 2e-28
Identities = 73/237 (30%), Positives = 134/237 (55%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M++ ++V K +K+ + ++ ++KK E ++ GPSG+GK+ L+ + + + G I +
Sbjct: 1 MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWV 60
Query: 60 NGVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
+GV+V T + + ++ Q + L+PH+TV +NI +K++ + ++ ++K E+
Sbjct: 61 DGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAPMKVKGQNAEQAEKKAMEL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ +G+ H P LSGG++QRVAIAR L +EP ++L DEP + LD + + MK
Sbjct: 121 LERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVLKVMK 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
E G T + VTH A + DRV + +G++++ + F+NP E +FL
Sbjct: 181 D-LAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDETPEAFFTNPKHERAKQFL 236
>sp|P45769|YHDZ_ECOLI HYPOTHETICAL AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YHDZ
>gi|7442515|pir||A65120 ABC-type transport protein yhdZ
- Escherichia coli >gi|606212|gb|AAA58075.1| (U18997)
ORF_o252 [Escherichia coli] >gi|1789672|gb|AAC76303.1|
(AE000406) putative ATP-binding component of a transport
system [Escherichia coli K12]
Length = 252
Score = 126 bits (314), Expect = 3e-28
Identities = 79/238 (33%), Positives = 136/238 (56%), Gaps = 9/238 (3%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ +E+V+K Y +F L++I+ V+ E ++ GPSG+GK+ + I + E +GRI++
Sbjct: 12 MITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVV 71
Query: 60 NGV----DVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEI-DRKVKE 113
+G+ D+ + ++ + + Q + LFPH+TV N + +R++ ++E D V
Sbjct: 72 DGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMPKKEAEDLAVHY 131
Query: 114 ISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEM 173
+ +V EH H+ P +SGG++QRVAIAR+L ++P+++L DEP + LD + + M
Sbjct: 132 LERVRIAEHA-HKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMVKEVLDTM 190
Query: 174 KVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
+ + G T L VTH A ++ DRV M RG +V+ E F++P E FL
Sbjct: 191 -IGLAQSGMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFAHPKSERTRAFL 247
>sp|P45677|PEBC_CAMJE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN PEB1C
>gi|11277299|pir||A81366 ABC-type amino-acid transporter
ATP-binding protein Cj0922c [imported] - Campylobacter
jejuni (strain NCTC 11168) >gi|6968359|emb|CAB73179.1|
(AL139076) ABC-type amino-acid transporter ATP-binding
protein [Campylobacter jejuni]
Length = 242
Score = 126 bits (314), Expect = 3e-28
Identities = 79/238 (33%), Positives = 132/238 (55%), Gaps = 7/238 (2%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ +++V+K Y L++I+ VK+ E +I+GPSG+GK+ + + G+ E G +++
Sbjct: 1 MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVV 60
Query: 60 NGVDVTSYPPE----KRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
N + V ++ + ++ A + Q + L+PHMTV N+ +KL++ S++E + +
Sbjct: 61 NNL-VLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAEETAFKY 119
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
KV+G+ + P TLSGG++QRVAIAR+L + +L DEP + LD +T + MK
Sbjct: 120 LKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVLDVMK 179
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
+ T + VTH A + DR+ M G +V+ E FSNP E FLG
Sbjct: 180 EISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSEFFSNPKTERARLFLG 237
>pir||G81168 amino acid ABC transporter, ATP-binding protein NMB0696 [imported]
- Neisseria meningitidis (group B strain MD58)
>gi|7225924|gb|AAF41113.1| (AE002424) amino acid ABC
transporter, ATP-binding protein [Neisseria meningitidis
MC58]
Length = 242
Score = 126 bits (314), Expect = 3e-28
Identities = 73/237 (30%), Positives = 134/237 (55%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M++ ++V K +K+ + ++ ++KK E ++ GPSG+GK+ L+ + + + G I +
Sbjct: 1 MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLIRTVNQLESIESGEIWV 60
Query: 60 NGVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
+GV+V T + + ++ Q + L+PH+TV +NI +K++ + ++ ++K E+
Sbjct: 61 DGVNVADPKTDLNKIREEVGFVFQGFNLYPHLTVLENITLAPMKVKGQNAEQAEKKAMEL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ +G+ H P LSGG++QRVAIAR L +EP ++L DEP + LD + + MK
Sbjct: 121 LERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLFDEPTSALDPEMVGEVLKVMK 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
E G T + VTH A + DRV + +G++++ + F+NP E +FL
Sbjct: 181 D-LAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDETPEAFFTNPKHERAKQFL 236
>pir||F81947 probable amino acid permease ATP-binding protein NMA1000 [imported]
- Neisseria meningitidis (group A strain Z2491)
>gi|7379702|emb|CAB84269.1| (AL162754) putative amino
acid permease ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 251
Score = 126 bits (314), Expect = 3e-28
Identities = 85/245 (34%), Positives = 132/245 (53%), Gaps = 16/245 (6%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+++ ++ K + K LR I+ DV K + +ILGPSG+GKT L + + P++G+I
Sbjct: 1 MIKIRNIHKTFGKNTILRGINLDVCKGQVVVILGPSGSGKTTFLRCLNALEMPEDGQIEF 60
Query: 60 NG-----VDVTSYPPE------KRNLAYIPQDYALFPHMTVYDNIAFG--LKLRRISRQE 106
+ +D + P + +R + Q Y LFPH T +N+ G + + Q
Sbjct: 61 DNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTALENVMEGPVAVQGKPAAQA 120
Query: 107 IDRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTK 166
+ +K + KV G+ + P LSGG++QRV IARAL I+PEL+L DEP + LD +
Sbjct: 121 REEALKLLEKV-GLGDKVDLYPYQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELV 179
Query: 167 SRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEG 226
+ MK +E G+T + VTH + A+ + V VM G +V+ G KE+F +P E
Sbjct: 180 QDVLNAMKELARE-GWTMVVVTHEIKFALEVATTVVVMDGGVIVEQGSPKELFDHPKHER 238
Query: 227 VARFL 231
RFL
Sbjct: 239 TRRFL 243
>dbj|BAB04773.1| (AP001510) transposase (08)/ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 901
Score = 126 bits (314), Expect = 3e-28
Identities = 68/220 (30%), Positives = 129/220 (57%), Gaps = 2/220 (0%)
Query: 1 MLRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ V +SK Y+ ++ + I+ ++K E +LGP+GAGK+ + +I+ +I+P G +++
Sbjct: 592 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 651
Query: 60 NGVDVTSYPPEKRN-LAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G + R+ L +PQ+ A++ +T +N+AF K+ + +E+ +++ +++
Sbjct: 652 KGGSIHKQSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLV 711
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G+E + + T SGG K+R+ IA AL+ EPEL+++DEP +D Q++S + +K +
Sbjct: 712 GLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQ 771
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEV 218
E T ++ +H EE L DR+ +M RG ++ G EV
Sbjct: 772 EREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEV 811
>pir||G69633 glutamine transport protein glnQ - Bacillus subtilis
>gi|2635188|emb|CAB14684.1| (Z99117) glutamine ABC
transporter (ATP-binding protein) [Bacillus subtilis]
>gi|2635206|emb|CAB14701.1| (Z99118) glutamine ABC
transporter (ATP-binding protein) [Bacillus subtilis]
Length = 242
Score = 126 bits (313), Expect = 4e-28
Identities = 78/237 (32%), Positives = 129/237 (53%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ ++V+K Y +F L+ I+ ++K E +I+GPSG+GK+ LL I + +EG + +
Sbjct: 1 MITFQNVNKHYGDFHVLKQINLQIEKGEVVVIIGPSGSGKSTLLRCINRLESINEGVLTV 60
Query: 60 NGVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
NG + T ++N+ + Q + L+PH TV NI +K+ R S ++ +
Sbjct: 61 NGTAINDRKTDINQVRQNIGMVFQHFHLYPHKTVLQNIMLAPVKVLRQSPEQAKETARYY 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ +GI P LSGG++QRVAIAR L ++PE++L DEP + LD + + MK
Sbjct: 121 LEKVGIPDKADAYPSQLSGGQQQRVAIARGLAMKPEVMLFDEPTSALDPEMIGEVLDVMK 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
KE G T + VTH A + DR+ + G++++ E ++NP +E FL
Sbjct: 181 TLAKE-GMTMVVVTHEMGFAKEVADRIVFIDEGKILEEAVPAEFYANPKEERARLFL 236
>pir||A70158 ABC transporter, ATP-binding protein homolog - Lyme disease
spirochete >gi|2688376|gb|AAC66828.1| (AE001151) ABC
transporter, ATP-binding protein [Borrelia burgdorferi]
Length = 277
Score = 126 bits (313), Expect = 4e-28
Identities = 75/227 (33%), Positives = 129/227 (56%), Gaps = 8/227 (3%)
Query: 1 MLRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L+ +++ K Y E + I+ ++ K E +LGP+GAGKT I G I+P+ G++++
Sbjct: 39 VLKADNIIKKYGEKLAVNGITINIYKGEVVGLLGPNGAGKTTTFYTIVGFIKPNAGKVLI 98
Query: 60 NGVDVTS---YPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEIS- 115
N +++S Y + + Y+PQD ++F +TV +NI L+ RR + +RK++ ++
Sbjct: 99 NDYNISSLNMYERARIGIVYLPQDASIFRELTVEENIMVALE-RREDLSKAERKIELVNL 157
Query: 116 -KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
K I+ + +K TLSGGE++R IARAL + P LLLDEPFA +D +K
Sbjct: 158 LKEFEIKRIQSQKAYTLSGGERRRAEIARALAVNPYFLLLDEPFAGIDPIAIGDIKNIIK 217
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSN 221
+ KE L H+ +A + DR ++ +G+++ GDV + S+
Sbjct: 218 I-LKEKNIGVLITDHNVRDAFDIIDRAYIVYQGQVLDEGDVDYIISS 263
>pir||G70800 probable ABC transporter ATP-binding protein - Mycobacterium
tuberculosis (strain H37RV) >gi|2960182|emb|CAA18080.1|
(AL022121) proV [Mycobacterium tuberculosis]
Length = 376
Score = 126 bits (313), Expect = 4e-28
Identities = 79/238 (33%), Positives = 128/238 (53%), Gaps = 6/238 (2%)
Query: 1 MLRVESVSKDYKE--FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
M+ + VSK Y + ++ +V + +GPSG GKT L +I +++P G I
Sbjct: 1 MICFDDVSKVYAHGATAVDRLTLEVPNGMLTVFVGPSGCGKTTALRMINRMVDPTSGTIT 60
Query: 59 LNGVDVTSYPPEKRNLA--YIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
++G DV++ K L Y+ Q+ L PH V DN+A L+ R+ + E+ +
Sbjct: 61 VDGTDVSTVNAVKLRLGIGYVIQNAGLMPHQRVIDNVATVPVLKGQPRRAARKAGYEVLE 120
Query: 117 VLGIE-HLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKV 175
+G++ + R P LSGGE+QRV +ARAL +P +LL+DEPF+ +D + E+
Sbjct: 121 RVGLDPKVATRYPAQLSGGEQQRVGVARALAADPPILLMDEPFSAVDPVVRHELQNEILR 180
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVML-RGRLVQVGDVKEVFSNPVDEGVARFLG 232
+ EL T + VTH +EA+ L D V V G L Q + + S+P ++ V++F+G
Sbjct: 181 LQAELHKTIVFVTHDIDEALKLADLVAVFAPGGALAQYDETARLLSSPANDFVSKFIG 238
>dbj|BAA83955.1| (AB024563) YFIL [Bacillus halodurans]
Length = 310
Score = 126 bits (313), Expect = 4e-28
Identities = 68/220 (30%), Positives = 129/220 (57%), Gaps = 2/220 (0%)
Query: 1 MLRVESVSKDYKEFKL-RDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ V +SK Y+ ++ + I+ ++K E +LGP+GAGK+ + +I+ +I+P G +++
Sbjct: 1 MIEVIDLSKTYRNRQVVKGINMFIEKGEMVGLLGPNGAGKSTTISMISSLIQPTSGDVLI 60
Query: 60 NGVDVTSYPPEKRN-LAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G + R+ L +PQ+ A++ +T +N+AF K+ + +E+ +++ +++
Sbjct: 61 KGGSIHKRSKAIRSILGVVPQEIAVYHDLTARENLAFFGKIYGLKGEELKHRMESTLQLV 120
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G+E + + T SGG K+R+ IA AL+ EPEL+++DEP +D Q++S + +K +
Sbjct: 121 GLEERQNDRVHTFSGGMKRRLNIAVALLHEPELIIMDEPTVGIDPQSRSHILETVKTLNQ 180
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEV 218
E T ++ +H EE L DR+ +M RG ++ G EV
Sbjct: 181 EREMTVIYTSHYMEEVEYLCDRLYIMDRGEVIASGTKDEV 220
>sp|P75264|Y187_MYCPN HYPOTHETICAL ABC TRANSPORTER ATP-BINDING PROTEIN MG187 HOMOLOG
(E07_ORF586) >gi|2146652|pir||S73346
sn-glycerol-3-phosphate transport system permease ugpC -
Mycoplasma pneumoniae (strain ATCC 29342)
>gi|1673667|gb|AAB95668.1| (AE000003)
sn-glycerol-3-phosphate transport system permease
protein [Mycoplasma pneumoniae]
Length = 586
Score = 125 bits (311), Expect = 7e-28
Identities = 80/237 (33%), Positives = 134/237 (55%), Gaps = 15/237 (6%)
Query: 97 LKLRRISRQE-IDRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLD 155
L+ R +S ++ I+R KE+++ L I +LH++P +SGG++QRVAIARA+V P++LL+D
Sbjct: 329 LQKRIVSLKDFINRTAKEVAEKLEITKILHKRPANISGGQQQRVAIARAIVRRPKVLLMD 388
Query: 156 EPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDV 215
EP +NLD + + + ++ ++++L T++ VTH EEA+S+ D + M G++ Q+G
Sbjct: 389 EPLSNLDAKLRVQTRQWIRKFQQDLQITTVFVTHDQEEAMSISDTIVCMSTGKVQQIGSP 448
Query: 216 KEVFSNPVDEGVARFLGFE--NIIEGVAKGNILEAN-----GVKITLPISVEGKVRIGVR 268
E++ P +E VA FLG NI+ K L N K LP +G +R+G R
Sbjct: 449 SELYLKPANEFVATFLGSPEMNIVNATVKAGQLLWNENPLVKTKFDLP---DGAIRVGFR 505
Query: 269 PEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIGGITLKAFITRSSLIELG 325
+++ T P K F +I +E LG + ++ G+ L + S E+G
Sbjct: 506 YDEV---TAP-KNDGSPVFSGTLISVENLGKHMVGVVESNGVQLNVRLELSHQFEVG 558
Score = 93.2 bits (228), Expect = 4e-18
Identities = 43/97 (44%), Positives = 66/97 (67%), Gaps = 1/97 (1%)
Query: 2 LRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
+ +++ D+ E + +I+ VKK+E +LGPSG GKT L +IAG+I P G+++ N
Sbjct: 13 IEFKNIVVDFGESIAIDNINLTVKKKELVTLLGPSGCGKTTSLSVIAGLIAPTSGQVLFN 72
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGL 97
G DVT PP++R L + Q+YAL+PHM+V++NI F L
Sbjct: 73 GYDVTKKPPQQRKLGLVFQNYALYPHMSVFENIVFPL 109
>dbj|BAB04005.1| (AP001508) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 259
Score = 125 bits (311), Expect = 7e-28
Identities = 67/200 (33%), Positives = 117/200 (58%), Gaps = 11/200 (5%)
Query: 1 MLRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
+L V+ + K+Y + L+ ++FD+ E I+GPSG+GKT LL IA II+P G
Sbjct: 7 LLEVQDLQKNYGKKNNLTKALKGVNFDILPGEFLGIMGPSGSGKTTLLNCIATIIKPTSG 66
Query: 56 RIILNGVDVTSYPPEK------RNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDR 109
R++L+G +++++ + + Y+ QD+ L ++T +NI L + + +
Sbjct: 67 RVLLHGKNISAFDSKDLAKYRGSRIGYLFQDFELLDNLTGQENILLPLAIHGVDFTKARV 126
Query: 110 KVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRF 169
K+ E++ +L I +LH+ P +SGG+KQRVA AR L+ +P+++L DEP LD ++
Sbjct: 127 KLDELASILDIADILHKFPSQMSGGQKQRVAAARCLISDPDIVLADEPTGALDTRSARTL 186
Query: 170 MTEMKVWRKELGFTSLHVTH 189
MT+++ + G T L V+H
Sbjct: 187 MTKLESINRSSGRTILMVSH 206
>pir||F81348 ABC transport system ATP-binding protein Cj0774c [imported] -
Campylobacter jejuni (strain NCTC 11168)
>gi|6968220|emb|CAB73039.1| (AL139076) ABC transport
system ATP-binding protein [Campylobacter jejuni]
Length = 336
Score = 125 bits (310), Expect = 9e-28
Identities = 77/255 (30%), Positives = 134/255 (52%), Gaps = 24/255 (9%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M++++++ K Y KE + D+S ++KK E + I+G SGAGK+ LL I G+ EG + +
Sbjct: 1 MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQEGSLKV 60
Query: 60 NGVDVTSYPPEK--------RNLAYIPQDYALFPHMTVYDNIAFGLKLRR---------- 101
++ +K +++ I Q++AL V++N+A L+
Sbjct: 61 FDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTHYTQCKFHAKLF 120
Query: 102 ----ISRQEIDRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEP 157
+S +EI +KV + +++G++H PR LSGG+KQRVAIARAL + P++LL DE
Sbjct: 121 NKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPKILLSDEA 180
Query: 158 FANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKE 217
+ LD T + + E G T + VTH + + + ++ G+++ G + E
Sbjct: 181 TSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQIIGSGAIDE 240
Query: 218 VFSNPVDEGVARFLG 232
+F P + + FLG
Sbjct: 241 LFLRP-NAKMKEFLG 254
>gb|AAK40417.1| ABC transporter, ATP binding protein [Sulfolobus solfataricus]
Length = 246
Score = 124 bits (309), Expect = 1e-27
Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++ V+ + K+YK+ + LR ISF V K E F +LGP+GAGKT ++I++ +++P G + +
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 60 NGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G V + + + + +PQDY F +TV +NI + +KL ++D E+ +L
Sbjct: 65 IGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYNGKETQVD----ELISLL 120
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
+E + ++K R LSGG +RV IA A E+L LDEP LD + + F +K+ K
Sbjct: 121 DLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKM-MK 179
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFS 220
G T TH +EA L DRV ++ G+L++V E+ +
Sbjct: 180 NKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMA 221
>sp|Q47538|TAUB_ECOLI TAURINE TRANSPORT ATP-BINDING PROTEIN TAUB >gi|7445736|pir||F64764
taurine transport protein - Escherichia coli
>gi|1384059|dbj|BAA12839.1| (D85613) ATP-binding protein
[Escherichia coli] >gi|1657561|gb|AAB18089.1| (U73857)
ATP-binding protein [Escherichia coli]
>gi|1786563|gb|AAC73469.1| (AE000143) taurine
ATP-binding component of a transport system [Escherichia
coli K12]
Length = 255
Score = 124 bits (309), Expect = 1e-27
Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 6/209 (2%)
Query: 1 MLRVESVSKDYK-EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
ML++ + DY + L DI+ ++ E ++LGPSG GKT LL +IAG + G I L
Sbjct: 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIQL 60
Query: 60 NGVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLG 119
G + P +R + + Q+ L P V DN+AFGL+L I + + ++ K +G
Sbjct: 61 AGKRIEG-PGAERGVVF--QNEGLLPWRNVQDNVAFGLQLAGIEKMQRLEIAHQMLKKVG 117
Query: 120 IEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMT-EMKVWRK 178
+E R LSGG++QRV IARAL P+LLLLDEPF LD T+ + T +K+W +
Sbjct: 118 LEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTRDQMQTLLLKLW-Q 176
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRG 207
E G L +TH EEA+ + + ++ G
Sbjct: 177 ETGKQVLLITHDIEEAVFMATELVLLSSG 205
>pir||S75436 hypothetical protein c05019 - Sulfolobus solfataricus
>gi|1707842|emb|CAA69520.1| (Y08257) putative ABC
transporter [Sulfolobus solfataricus]
Length = 246
Score = 124 bits (309), Expect = 1e-27
Identities = 77/222 (34%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++ V+ + K+YK+ + LR ISF V K E F +LGP+GAGKT ++I++ +++P G + +
Sbjct: 5 IVEVKDLYKEYKDKEVLRGISFTVYKGEIFSLLGPNGAGKTTTVKILSCVLKPTRGEVKV 64
Query: 60 NGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G V + + + + +PQDY F +TV +NI + +KL ++D E+ +L
Sbjct: 65 IGYKVPNECGKIRERIGVMPQDYQGFLDLTVRENIEYFVKLYNGKETQVD----ELISLL 120
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
+E + ++K R LSGG +RV IA A E+L LDEP LD + + F +K+ K
Sbjct: 121 DLEKVKNQKLRYLSGGYVRRVGIASAFAGSQEILFLDEPTVGLDPKARRGFWEIIKM-MK 179
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFS 220
G T TH +EA L DRV ++ G+L++V E+ +
Sbjct: 180 NKGVTIFLTTHYLDEAQKLSDRVAILYGGKLIKVSTADEIMA 221
>pir||C82063 probable thiamin ABC transporter, ATP-binding protein VC2537
[imported] - Vibrio cholerae (group O1 strain N16961)
>gi|9657121|gb|AAF95678.1| (AE004323) thiamine ABC
transporter, ATP-binding protein, putative [Vibrio
cholerae]
Length = 244
Score = 124 bits (309), Expect = 1e-27
Identities = 75/231 (32%), Positives = 124/231 (53%), Gaps = 1/231 (0%)
Query: 1 MLRVESVSKDYKEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILN 60
ML ++ V +Y E + + +V + ++GPSGAGK+ LL ++AG IEP G I +N
Sbjct: 7 MLALDKVRYEY-EHEWFEFDLNVADGDIVALMGPSGAGKSTLLSLVAGFIEPVSGSIKVN 65
Query: 61 GVDVTSYPPEKRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGI 120
V P +R + + Q++ LF H+TV +NI GL E ++V + ++ +GI
Sbjct: 66 DQSVLGLAPYQRPFSMLFQEHNLFAHLTVRENIGLGLHPGLKLNAEQKQQVVDAAQQVGI 125
Query: 121 EHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKEL 180
L R P LSGG++QRVA+AR V + LLDEPF+ LD + + +K E
Sbjct: 126 ADYLDRLPEQLSGGQRQRVALARCFVQPNPIWLLDEPFSALDPLLREEMLALVKQLASER 185
Query: 181 GFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
T + VTH +A ++ ++ + +G++ V D + V + +A+F+
Sbjct: 186 QRTVVMVTHHLSDARAIASQIAFLSQGKVKVVSDCQAVTAQHPHPELAQFV 236
>dbj|BAB04472.1| (AP001509) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 260
Score = 124 bits (309), Expect = 1e-27
Identities = 71/202 (35%), Positives = 120/202 (59%), Gaps = 13/202 (6%)
Query: 1 MLRVESVSKDYKEFK-------LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPD 53
+L+ E+VSK Y K L + VK+ E I+GPSG+GK+ LL I+A I +P
Sbjct: 2 LLQAENVSKIYTSGKGGASHQALDQFNLHVKRGEFVGIMGPSGSGKSTLLHILAMIDKPS 61
Query: 54 EGRIILNGVDVTSYPPE------KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEI 107
G + ++GV++ + + ++ L +I QD+ L + V +NI L L + + E+
Sbjct: 62 AGTVKIDGVNMKALSRKEVALFRRKRLGFIFQDFNLLDTLNVKENILLPLVLESVDKAEM 121
Query: 108 DRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKS 167
+R+++E++ +LGI+ +L ++ +SGG++QR A ARAL+ PEL+L DEP NLD ++ +
Sbjct: 122 ERRLQELTGILGIQDILLKRTYEISGGQQQRTAAARALIHNPELILADEPTGNLDSKSAT 181
Query: 168 RFMTEMKVWRKELGFTSLHVTH 189
MT ++ +E + L VTH
Sbjct: 182 SLMTALEALNREQERSILMVTH 203
>sp|P24693|YHBG_THIFE PROBABLE ABC TRANSPORTER ATP-BINDING PROTEIN IN NTRA/RPON 5'REGION
(ORF1) >gi|97388|pir||A37761 hypothetical protein 1
(ntrA 5' region) - Thiobacillus ferrooxidans
>gi|154643|gb|AAA27378.1| (M58480) 5' end potential;
putative [Acidithiobacillus ferrooxidans]
Length = 241
Score = 124 bits (308), Expect = 2e-27
Identities = 73/230 (31%), Positives = 125/230 (53%), Gaps = 11/230 (4%)
Query: 1 MLRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
+L+ +S+ K Y+ +RD+S V E +LGP+GAGKT ++ G++ PD G I L
Sbjct: 4 LLQAQSLFKSYRRRVVVRDVSVQVATGEVVGLLGPNGAGKTTTFYMMVGLVRPDRGHIFL 63
Query: 60 NGVDVTSYPPEKR---NLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISK 116
D+T+ P +R L Y+PQ+ ++F M+ DN+ L+ +S E + +++
Sbjct: 64 QQRDITALPMHERARMGLGYLPQEPSVFRQMSAADNVLAVLETLPLSPVERQERQEQLLS 123
Query: 117 VLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLD---VQTKSRFMTEM 173
L + L K +LSGGE++RV IARAL + P +LLDEPFA +D V R + ++
Sbjct: 124 ELHLHALRDTKGHSLSGGERRRVEIARALAMSPRFILLDEPFAGIDPISVLEIQRLIRDL 183
Query: 174 KVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPV 223
+ G L H+ E + + +R ++ G+++ G +E+ +P+
Sbjct: 184 RA----RGIGVLITDHNVRETLGICERAYILHDGKVLTAGSPQEIVDDPM 229
>sp|P30750|ABC_ECOLI ATP-BINDING PROTEIN ABC >gi|7445928|pir||G64744 probable ABC-type
transport protein abc - Escherichia coli
>gi|1552775|gb|AAB08627.1| (U70214) ATP-binding protein
[Escherichia coli] >gi|1786398|gb|AAC73310.1| (AE000129)
ATP-binding component of a transporter [Escherichia coli
K12]
Length = 343
Score = 124 bits (308), Expect = 2e-27
Identities = 74/241 (30%), Positives = 128/241 (52%), Gaps = 10/241 (4%)
Query: 1 MLRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
M+++ +++K + + L ++S V + + ++G SGAGK+ L+ + + P EG
Sbjct: 1 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEG 60
Query: 56 RIILNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRK 110
++++G ++T+ +R + I Q + L TV+ N+A L+L + E+ R+
Sbjct: 61 SVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRR 120
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
V E+ ++G+ P LSGG+KQRVAIARAL P++LL DE + LD T +
Sbjct: 121 VTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL 180
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARF 230
+K + LG T L +TH + + D V V+ G L++ V EVFS+P +F
Sbjct: 181 ELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKF 240
Query: 231 L 231
+
Sbjct: 241 I 241
>dbj|BAA77876.1| (D83536) ATP-binding protein ABC. [Escherichia coli]
Length = 343
Score = 124 bits (308), Expect = 2e-27
Identities = 74/241 (30%), Positives = 128/241 (52%), Gaps = 10/241 (4%)
Query: 1 MLRVESVSKDYKEFK-----LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
M+++ +++K + + L ++S V + + ++G SGAGK+ L+ + + P EG
Sbjct: 1 MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEG 60
Query: 56 RIILNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRK 110
++++G ++T+ +R + I Q + L TV+ N+A L+L + E+ R+
Sbjct: 61 SVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALRLELDNTPKDEVKRR 120
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
V E+ ++G+ P LSGG+KQRVAIARAL P++LL DE + LD T +
Sbjct: 121 VTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL 180
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARF 230
+K + LG T L +TH + + D V V+ G L++ V EVFS+P +F
Sbjct: 181 ELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKF 240
Query: 231 L 231
+
Sbjct: 241 I 241
>sp|O34900|YTMN_BACSU PROBABLE AMINO-ACID ABC TRANSPORTER ATP-BINDING PROTEIN YTMN
>gi|7442519|pir||F69641 histidine transport protein hisP
- Bacillus subtilis >gi|2293251|gb|AAC00329.1|
(AF008220) putative amino acid transporter [Bacillus
subtilis] >gi|2635399|emb|CAB14894.1| (Z99118) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis] >gi|2635418|emb|CAB14912.1| (Z99119) histidine
transport protein (ATP-binding protein) [Bacillus
subtilis]
Length = 259
Score = 123 bits (307), Expect = 2e-27
Identities = 83/240 (34%), Positives = 129/240 (53%), Gaps = 10/240 (4%)
Query: 1 MLRVESVSKDYK-EFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ ++++ K + L+ I+ V+K E I+GPSG+GKT L + + PDEG I +
Sbjct: 1 MIEIKNIHKQFGIHHVLKGINLTVRKGEVVTIIGPSGSGKTTFLRCLNLLERPDEGIISI 60
Query: 60 NGVDVTSYPPEKRNL-------AYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVK 112
+ + P K+ + A + Q Y LF H TV +N+ GL + R R++ V
Sbjct: 61 HDKVINCRFPSKKEVHWLRKQTAMVFQQYHLFAHKTVIENVMEGLTIARKMRKQDAYAVA 120
Query: 113 EIS-KVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMT 171
E + +G++ L+ P LSGG+KQRV IARAL I P++LL DEP A LD + +
Sbjct: 121 ENELRKVGLQDKLNAYPSQLSGGQKQRVGIARALAIHPDVLLFDEPTAALDPELVGEVL- 179
Query: 172 EMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
E+ + + G T + VTH E A + D+V M G +V+ G +EVF + + +FL
Sbjct: 180 EVMLEIVKTGATMIVVTHEMEFARRVSDQVVFMDEGVIVEQGTPEEVFRHTKKDRTRQFL 239
>pir||T34822 ABC-transporter ATP binding protein - Streptomyces coelicolor
>gi|2815356|emb|CAA16479.1| (AL021530) ABC-transporter
ATP binding protein [Streptomyces coelicolor A3(2)]
Length = 230
Score = 123 bits (307), Expect = 2e-27
Identities = 74/222 (33%), Positives = 120/222 (53%), Gaps = 12/222 (5%)
Query: 1 MLRVESVSKDYKE-----FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEG 55
M+RVE V K Y LR +SFDV + E + G SG+GKT LL I+ G+ PD G
Sbjct: 9 MVRVEDVRKSYGRDSAAVHALRGVSFDVPRGELIALKGRSGSGKTTLLNIVGGLDTPDAG 68
Query: 56 RIILNGVDVTSYPPE------KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDR 109
R+ ++G D+ + + + ++ Q + L P +T +N+ ++LRR + +E +
Sbjct: 69 RVEVDGRDLAELDEDGLLALRRDRVGFVFQSFGLIPILTAAENVGVPMRLRRAAAREREE 128
Query: 110 KVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRF 169
+V+ + ++G+ ++P +SGG++QRVAIARAL P LL+ DEP LD +T
Sbjct: 129 RVELLLSLVGLADHAAQRPGEMSGGQQQRVAIARALANNPALLIADEPTGQLDAETGHSV 188
Query: 170 MTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQ 211
M ++ + T+L TH + L DRV + G +V+
Sbjct: 189 MELLRAVVRSEQVTALVATHD-ATLLDLADRVLELRDGEIVE 229
>pir||E82210 amino acid ABC transporter, ATP-binding protein VC1359 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9655852|gb|AAF94517.1| (AE004215) amino acid ABC
transporter, ATP-binding protein [Vibrio cholerae]
Length = 251
Score = 123 bits (307), Expect = 2e-27
Identities = 77/237 (32%), Positives = 133/237 (55%), Gaps = 7/237 (2%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M++++ ++K Y EF L++I+ +VKK E +I GPSG+GK+ ++ I + E +G+II+
Sbjct: 10 MIQIKDMNKWYGEFHVLKNINLNVKKGERIVICGPSGSGKSTMIRCINRLEEHQKGQIIV 69
Query: 60 NGVDVT----SYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
G ++T + +R + Q + LFPH+TV +N + ++++ + + + +
Sbjct: 70 AGNELTEDLKNIELVRREVGMCFQHFNLFPHLTVLENCTLAPIWVKKMPKDKAEEIAMKY 129
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ I + P LSGG++QRVAIAR+L + P+++L DEP + LD + R + ++
Sbjct: 130 LTRVRIPEQADKYPGQLSGGQQQRVAIARSLCMNPQIMLFDEPTSALDPE-MVREVLDVM 188
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFL 231
V E G T L VTH A + DRV M G +++ + KE F NP + FL
Sbjct: 189 VELAEEGMTMLCVTHEMGFAKEVADRVIFMDAGEIIEENNPKEFFENPQSDRTQNFL 245
>pir||C48518 ABC-type transport protein (PEB1 5' region) - Campylobacter jejuni
>gi|388564|gb|AAA02918.1| (L13662) major cell-binding
factor receptor [Campylobacter jejuni]
Length = 242
Score = 123 bits (306), Expect = 3e-27
Identities = 78/238 (32%), Positives = 130/238 (53%), Gaps = 7/238 (2%)
Query: 1 MLRVESVSKDY-KEFKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ +++V+K Y L+ + VK+ E +I+GPSG+GK+ + + G+ E G +++
Sbjct: 1 MIELKNVNKYYGTHHVLKIFNLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVV 60
Query: 60 NGVDVTSYPPE----KRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
N + V ++ + ++ A + Q + L+PHMTV N+ +KL++ S++E + +
Sbjct: 61 NNL-VLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAEETAFKY 119
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
KV+G+ + P TLSGG++QRVAIAR+L + +L DEP + LD +T + MK
Sbjct: 120 LKVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVLDVMK 179
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLG 232
+ T + VTH A + DR+ M G +V+ E FSNP E FLG
Sbjct: 180 EISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSEFFSNPKTERARLFLG 237
>pir||C69049 ABC transporter (ATP-binding protein) - Methanobacterium
thermoautotrophicum (strain Delta H)
>gi|2622479|gb|AAB85847.1| (AE000900) ABC transporter
(ATP-binding protein) [Methanobacterium
thermoautotrophicum]
Length = 319
Score = 123 bits (305), Expect = 4e-27
Identities = 87/273 (31%), Positives = 143/273 (51%), Gaps = 18/273 (6%)
Query: 1 MLRVESVSKDYKEFKLRD-ISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ VESVSK + + D +SF V + E I+G +GAGKT + IIAGI+ PD G + +
Sbjct: 18 MIEVESVSKSFGRIRALDNLSFSVAEGELMGIIGHNGAGKTTAIRIIAGILHPDSGTVRV 77
Query: 60 NGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G DVT P K + Y+P++ L+ D + + +L + R +D ++ E+ +++
Sbjct: 78 GGHDVTEDPLSVKSMIGYLPEEPNLYERFRAGDLLRYFGELYGVPRDVLDDRIAELLELV 137
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTK---SRFMTEMKV 175
G+ T S G +QR+ IARAL+ +P +++ DEP LD T F+ ++K
Sbjct: 138 GMTDRAMDPINTFSKGLRQRIGIARALIHDPPIIIFDEPTMGLDPATAFSIREFIRDLKG 197
Query: 176 WRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFEN 235
+ T + TH EEA L DRV ++ +GR++ +G E+ S + V +
Sbjct: 198 SK-----TMILCTHYMEEAEYLCDRVAIINQGRILDIGTPDELKSKIRGDLVLEVKVRD- 251
Query: 236 IIEGVAKGNILEANGVK------ITLPISVEGK 262
I V +G+++ GVK TL +S+E +
Sbjct: 252 -ISSVGEGDLMMIPGVKSVEVDGSTLRVSLENR 283
>pir||A70482 ABC transporter - Aquifex aeolicus >gi|2984331|gb|AAC07852.1|
(AE000774) ABC transporter [Aquifex aeolicus]
Length = 305
Score = 123 bits (305), Expect = 4e-27
Identities = 77/236 (32%), Positives = 134/236 (56%), Gaps = 15/236 (6%)
Query: 1 MLRVESVSKDYKE----------FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGII 50
+L +++++K YK F L+++S +K+ + I+G SG+GK+ L +II +
Sbjct: 3 LLSIQNLTKVYKVPAGFLRKKNFFALKEVSLSIKQGDFLAIVGESGSGKSTLGKIILRLE 62
Query: 51 EPDEGRIILNGVDVTSYPPE-KRNLAYIPQD--YALFPHMTVYDNIAFGLKLRRISRQEI 107
+P +G++ G D+ S E R ++ + QD +L P M V + + L + R+ ++
Sbjct: 63 KPTKGKVSFKGKDIFSMGKEYTRKVSAVFQDPRSSLNPRMKVEEILEEPLIVHRVKGRK- 121
Query: 108 DRKVKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKS 167
+R +K + +V E LL ++P +SGG+ QRVAIARAL++EPEL++ DEP A+LDV +
Sbjct: 122 ERVLKVLQRVRLSEELLEKRPLQISGGQAQRVAIARALILEPELIVADEPTASLDVSVQE 181
Query: 168 RFMTEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPV 223
+ K + G + VTH + + VGV+ G L+++G +EV NP+
Sbjct: 182 EILELFKELNSK-GISFFFVTHDIRVVEKVANMVGVIYAGILMELGKKEEVLKNPL 236
>pir||B72097 dipeptide transporter ATPase - Chlamydophila pneumoniae (strain
CWL029) >gi|4376554|gb|AAD18429.1| (AE001613) Dipeptide
Transporter ATPase [Chlamydophila pneumoniae CWL029]
>gi|8163441|gb|AAF73675.1| (AE002208) ABC transporter,
ATP-binding protein [Chlamydophila pneumoniae AR39]
>gi|8978654|dbj|BAA98490.1| (AP002546) dipeptide
transporter ATPase [Chlamydophila pneumoniae J138]
Length = 341
Score = 123 bits (305), Expect = 4e-27
Identities = 79/231 (34%), Positives = 127/231 (54%), Gaps = 11/231 (4%)
Query: 1 MLRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++ V+ VSK + L +SF V E F I+G SG+GKT LL + + P G I +
Sbjct: 8 IISVQDVSKKLGDHILLSKVSFSVYPGEVFGIVGHSGSGKTTLLRCLDFLDMPTSGSISV 67
Query: 60 NGVDVTSYPPEK-------RNLAYIPQDYALFPHMTVYDNIAFGLKLRR--ISRQEIDRK 110
G D S P +K + +AYI Q+Y LF TV++NIA+ L++ +S+ E++ +
Sbjct: 68 AGFD-NSLPTQKFSRRNFSKKVAYISQNYGLFSSKTVFENIAYPLRIHHSEMSKSEVEEQ 126
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
V + L + H P LSGG+KQ+VAIARA+V +PE++L DE + LD ++ +
Sbjct: 127 VYDTLNFLNLYHRHDAYPGNLSGGQKQKVAIARAIVCQPEVVLCDEITSALDPKSTENII 186
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSN 221
+ +E G T + V+H + + V VM +G + ++G +E+F N
Sbjct: 187 ERLLQLNQERGITLVLVSHEIDVVKKICSHVLVMHQGAVEELGTTEELFLN 237
>pir||E83478 probable ATP-binding component of ABC transporter PA1339 [imported]
- Pseudomonas aeruginosa (strain PAO1)
>gi|9947279|gb|AAG04728.1|AE004563_5 (AE004563) probable
ATP-binding component of ABC transporter [Pseudomonas
aeruginosa]
Length = 244
Score = 123 bits (305), Expect = 4e-27
Identities = 73/227 (32%), Positives = 133/227 (58%), Gaps = 7/227 (3%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
M+ +++VSK Y +F+ L D S +V K E ++ GPSG+GK+ L++ + + +G I++
Sbjct: 1 MISIKNVSKWYGDFQVLTDCSTEVAKGEVVVVCGPSGSGKSTLIKCVNALEPFQKGDIVV 60
Query: 60 NGVDV----TSYPPEKRNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRKVKEI 114
+G + T+ P + + + Q + LFPH+++ +N+ +K+ S++E +K +
Sbjct: 61 DGTSIADPKTNLPKLRSRVGMVFQHFELFPHLSITENLTIAQIKVLGRSKEEATKKGLAL 120
Query: 115 SKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMK 174
+ +G++ H+ P LSGG++QRVAIARAL ++P ++L DEP + LD + + + M
Sbjct: 121 LERVGLKEHAHKHPGQLSGGQQQRVAIARALAMDPVVMLFDEPTSALDPEMVNEVLDVMV 180
Query: 175 VWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSN 221
E G T + VTH A + +RV M RG++V+ + +E F +
Sbjct: 181 QLAHE-GMTMMCVTHEMGFARKVANRVIFMDRGQIVEDCEKEEFFGD 226
>gb|AAG24255.1| (AY009114) YckI [Bacillus subtilis]
Length = 247
Score = 123 bits (305), Expect = 4e-27
Identities = 78/241 (32%), Positives = 132/241 (54%), Gaps = 11/241 (4%)
Query: 1 MLRVESVSKDYKEFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
ML V+ ++K + E + L+ I ++K + ILGPSG+GKT LL + + P+ G +
Sbjct: 1 MLTVKGLNKSFGENEILKKIDMKIEKGKVIAILGPSGSGKTTLLRCLNALEIPNRGELAF 60
Query: 60 NGVDVTSYPPEK--------RNLAYIPQDYALFPHMTVYDNIAFG-LKLRRISRQEIDRK 110
+ + K R + Q Y LFPH T +N+ G +++++ +++E+ ++
Sbjct: 61 DDFSIDFSKKVKQSDILQLRRKSGMVFQAYHLFPHRTALENVMEGPVQVQKRNKEEVRKE 120
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
++ +G++ + P LSGG++QRV IARAL I+PEL+L DEP + LD + +
Sbjct: 121 AIQLLDKVGLKDKMDLYPFQLSGGQQQRVGIARALAIQPELMLFDEPTSALDPELVGEVL 180
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARF 230
+K E G+T + VTH + A + D V + G +V+ G +E+FS P +E RF
Sbjct: 181 KVIKDLANE-GWTMVVVTHEIKFAQEVADEVIFIDGGVIVEQGPPEEIFSAPKEERTQRF 239
Query: 231 L 231
L
Sbjct: 240 L 240
>pir||C82360 cell division ATP-binding protein FtsE VC0148 [imported] - Vibrio
cholerae (group O1 strain N16961)
>gi|9654549|gb|AAF93325.1| (AE004104) cell division
ATP-binding protein FtsE [Vibrio cholerae]
Length = 233
Score = 122 bits (304), Expect = 5e-27
Identities = 73/196 (37%), Positives = 110/196 (55%), Gaps = 8/196 (4%)
Query: 1 MLRVESVSKDYKEFK--LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRII 58
++R + VSK Y+ + L+ + F +++ E + G SGAGK+ LL++I I P +G+I
Sbjct: 10 VIRFQQVSKAYRGGRQALQKVDFHLRRGEMAFLGGHSGAGKSTLLKLICAIERPTDGKIS 69
Query: 59 LNGVDVTSYPPE-----KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKE 113
NG D+T P + +RN+ + QD+ L ++YDN+A +++ IS EI R+V
Sbjct: 70 FNGHDITRIPNKDIPFLRRNIGIVFQDHRLLMDRSIYDNVALPMRIESISENEIKRRVSA 129
Query: 114 ISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEM 173
G+ P LSGGE+QRV IARA+V P LLL DEP NLD + SR +
Sbjct: 130 ALDKTGLLDKARCLPSQLSGGEQQRVGIARAVVNRPTLLLADEPTGNLDPELSSRVLRLF 189
Query: 174 KVWRKELGFTSLHVTH 189
+ + + G T L TH
Sbjct: 190 EEFNR-AGVTILLATH 204
>dbj|BAB03992.1| (AP001507) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 253
Score = 122 bits (304), Expect = 5e-27
Identities = 84/245 (34%), Positives = 131/245 (53%), Gaps = 15/245 (6%)
Query: 1 MLRVESVSKDYK---EFK-LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGR 56
+L V+ + KDY +K L+ I F +K+ E ++GPSG+GKT L I+ I P G
Sbjct: 5 ILNVQQLHKDYVGEVNYKALKGIDFQLKRNEFVSVMGPSGSGKTTFLNCISTIDRPTNGS 64
Query: 57 IILNGVDVTSYPPE------KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRK 110
I +N + E + L ++ QD+ L +TV +NI L L ++ +E+ +
Sbjct: 65 ITINQKNPYELNDEDLAKFRRSELGFVFQDFNLVHTLTVEENILLPLTLDAVNAKEMTSR 124
Query: 111 VKEISKVLGIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFM 170
+ E+ + LGIE ++ ++ +SGG+KQRVAIARA++ +P LLL DEP NLD + + M
Sbjct: 125 LAEVVEFLGIEEIMKKRTFEISGGQKQRVAIARAVIHQPSLLLADEPTGNLDSKAANSVM 184
Query: 171 TEMKVWRKELGFTSLHVTHSFEEAISLGDRVGVMLRGRL---VQVGDVKEVFSNPVDEGV 227
T + + + L VTH S +RV M G L +Q GD K+ F + + +
Sbjct: 185 TLFQSIHETFQTSLLMVTHD-PYVASFAERVIFMQDGMLYNEIQRGDHKKQFYQEIVDTL 243
Query: 228 ARFLG 232
FLG
Sbjct: 244 T-FLG 247
>dbj|BAB06933.1| (AP001518) ABC transporter (ATP-binding protein) [Bacillus
halodurans]
Length = 318
Score = 122 bits (304), Expect = 5e-27
Identities = 71/250 (28%), Positives = 131/250 (52%), Gaps = 10/250 (4%)
Query: 1 MLRVESVSKDYKE-FKLRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIIL 59
++++ ++K Y + + + +S ++K E F +LGP+GAGKT + ++ G+ EP G + +
Sbjct: 5 IIKLNEITKRYDDHYAVDHLSLSIRKGEIFGLLGPNGAGKTTSILMMLGLSEPTSGTVQV 64
Query: 60 NGVDVTSYPPE-KRNLAYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVL 118
G+D T YP E KR + Y+P + +P MT +N+ + L I + E + + + +
Sbjct: 65 AGIDSTKYPIEVKRKVGYLPDNVGFYPDMTGMENLLYTASLNGIQKIEAIERANTLLEKV 124
Query: 119 GIEHLLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRK 178
G+ +K S G KQR+ +A L+ PE+++LDEP +D + F+ ++ +
Sbjct: 125 GLTEAAKKKTGQYSRGMKQRLGLADVLMKGPEIIILDEPTLGIDPEGVRDFLHLIRNLNQ 184
Query: 179 ELGFTSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIE 238
T L +H + + DRVG+ + G+L+ GD +D+ V R E+++
Sbjct: 185 NENLTVLLCSHHLHQVQQVCDRVGIFVDGKLLAYGD--------LDQLVKRLFKHESVVI 236
Query: 239 GVAKGNILEA 248
VA I E+
Sbjct: 237 HVAASPIDES 246
>emb|CAA71848.1| (Y10908) sulfate transport ATP-binding protein [Bacillus cereus]
Length = 233
Score = 122 bits (302), Expect = 8e-27
Identities = 83/226 (36%), Positives = 117/226 (51%), Gaps = 14/226 (6%)
Query: 126 RKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSL 185
R P LSGG++QR+A+ARAL +EP++LLLDEPF LD + + ++ E TS+
Sbjct: 8 RYPAQLSGGQRQRIALARALAVEPKILLLDEPFGALDAKVRKELRRWLRKLHDEFQITSV 67
Query: 186 HVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGNI 245
VTH EEA+ + DR+ VM GR+ Q+G +EV+ NP V FLG N+ G
Sbjct: 68 FVTHDQEEALDVADRIVVMNEGRIEQMGTPEEVYENPASPFVYDFLGNVNLFHGRVHKGK 127
Query: 246 LEANGVKITLP-----ISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPL 300
L V++ P +V+G VRP + +S A A+V +GP+
Sbjct: 128 LNVGSVELEAPEHKHISNVDGVAY--VRPHHLSISRTKQSVDA---IPAKVSYSHAVGPV 182
Query: 301 VRVNLKIGGIT--LKAFITRSSLIELGISEGREVYVSFKTSAIKVF 344
V V LK G L+A I++ +L I G VYV K +KVF
Sbjct: 183 VYVELKRDGTDEYLEAEISKEQFRQLSIQAGDVVYVQPK--EVKVF 226
>emb|CAA67644.1| (X99258) ATP-binding subunit of ABC-transport system [Mycobacterium
tuberculosis]
Length = 370
Score = 117 bits (290), Expect = 2e-25
Identities = 103/348 (29%), Positives = 156/348 (44%), Gaps = 29/348 (8%)
Query: 18 DISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSY-------PPE 70
D+ F V E +LGP+GAGK+ L +IAG++ P G G V + P
Sbjct: 16 DVEFSVSAGEVLAVLGPNGAGKSTALHVIAGLLRPRRGLGTFGGPGVDRHRGRGECGDPR 75
Query: 71 KRNLAYIPQDYALFPH--------MTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEH 122
+ A + + + T + ++ R +R R ++E++ E
Sbjct: 76 PSSRAAVARPVVVSTPERGQKRGLRTTMPSRDVWVRARARTRASALRWLREVNA----EQ 131
Query: 123 LLHRKPRTLSGGEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGF 182
RKPR LSGG+ QRVAIARAL EP++LLLDEP LDV + + ++ G
Sbjct: 132 FADRKPRQLSGGQAQRVAIARALAAEPDVLLLDEPLTGLDVAAAAGIRSVLRSVVARSGC 191
Query: 183 TSLHVTHSFEEAISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGV-- 240
+ TH + +L DRV V+ G + ++G V +V + P AR G N++ G
Sbjct: 192 AVVLTTHDLLDVFTLADRVLVLESGTIAEIGPVADVLTAPRSRFGARIAGV-NLVNGTIG 250
Query: 241 AKGNILEANGVK-ITLPIS--VEGKVRIGV-RPEDIILSTEPVKTSARNEFRAEVIGIEE 296
G++ +G P+ G I V P + + EP S RN V ++
Sbjct: 251 PDGSLRTQSGAHWYGTPVQDLPTGHEAIAVFPPTAVAVYPEPPHGSPRNIVGLTVAEVDT 310
Query: 297 LGP--LVRVNLKIGGIT-LKAFITRSSLIELGISEGREVYVSFKTSAI 341
GP LVR + + GG L A IT + EL ++ G V+ S K +
Sbjct: 311 RGPTVLVRGHDQPGGAPGLAACITVDAATELRVAPGSRVWFSVKAQEV 358
>pir||D72484 probable ATP-binding protein APE2516 - Aeropyrum pernix (strain
K1) >gi|5106221|dbj|BAA81532.1| (AP000064) 323aa long
hypothetical ATP-binding protein [Aeropyrum pernix]
Length = 323
Score = 114 bits (282), Expect = 2e-24
Identities = 94/321 (29%), Positives = 154/321 (47%), Gaps = 34/321 (10%)
Query: 16 LRDISFDVKKEEHFIILGPSGAGKTVLLEIIAGIIEPDEGRIILNGVDVTSYPPEKRNL- 74
L + V + F +LGP+GAGKT L++I++ ++ PD G + G DV R+
Sbjct: 29 LDGVDLKVGRGTLFSLLGPNGAGKTTLVKILSTLLLPDSGWARVAGFDVVREANNVRSRI 88
Query: 75 -AYIPQDYALFPHMTVYDNIAFGLKLRRISRQEIDRKVKEISKVLGIEHLLHRKPRTLSG 133
+ + AL+ ++ +DN+ F +L I +E R+VKE+ +++G+E H + S
Sbjct: 89 GVVLGGERALYWRLSGWDNLWFFSQLYGIPPREAKRRVKELLEIVGLEEWAHVRVENYSK 148
Query: 134 GEKQRVAIARALVIEPELLLLDEPFANLDVQTKSRFMTEMKVWRKELGFTSLHVTHSFEE 193
G KQR+ IAR L+ +PE+LLLDEP LD + + ++ +E G T L TH E
Sbjct: 149 GMKQRLHIARGLINDPEVLLLDEPTIGLDPKAAREVRSIIRRIVRE-GRTVLLTTHYMVE 207
Query: 194 AISLGDRVGVMLRGRLVQVGDVKEVFSNPVDEGVARFLGFENIIEGVAKGN-----ILEA 248
A L DRV ++ +GR+V G +++ S +G E++IE G +LE
Sbjct: 208 AEELSDRVAIISKGRIVAEGPPEDLKS---------LVGGESVIELKVMGGDRVSMLLER 258
Query: 249 NGVKITLPISVEGKVRIGVRPEDIILSTEPVKTSARNEFRAEVIGIEELGPLVRVNLKIG 308
G ++ + R G R +++S A L L R+N I
Sbjct: 259 LGGRVISVVE-----RDGARVFRVLVSEPDSFIEAL------------LAELTRINASIR 301
Query: 309 GITLKAFITRSSLIELGISEG 329
G+ +++ I+L EG
Sbjct: 302 GLDVRSPSLEDVFIKLAGGEG 322
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.320 0.141 0.389
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119021120
Number of Sequences: 2977
Number of extensions: 4958399
Number of successful extensions: 24123
Number of sequences better than 1.0e-10: 2275
Number of HSP's better than 0.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 1690
Number of HSP's that attempted gapping in prelim test: 19591
Number of HSP's gapped (non-prelim): 2780
length of query: 344
length of database: 189,106,746
effective HSP length: 58
effective length of query: 286
effective length of database: 154,394,500
effective search space: 44156827000
effective search space used: 44156827000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 165 (68.7 bits)