BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0118 (amyA) DE:Alpha-amylase (or
4-alpha-glucanotransferase)
(655 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||E75206 alpha-amylase (or 4-alpha-glucanotransferase) PAB011... 1359 0.0
dbj|BAA22063.1| (D88253) 4-alpha-glucanotransferase [Thermococcu... 1034 0.0
dbj|BAA22062.1| (D87907) 4-alpha-glucanotransferase [Pyrococcus ... 1021 0.0
sp|O57932|AMY_PYRHO ALPHA-AMYLASE >gi|7435332|pir||G71241 probab... 994 0.0
sp|P49067|AMY_PYRFU ALPHA-AMYLASE >gi|1361921|pir||A49512 alpha-... 956 0.0
sp|P09961|AMY1_DICTH ALPHA-AMYLASE 1 (1,4-ALPHA-D-GLUCAN GLUCANO... 483 e-135
>pir||E75206 alpha-amylase (or 4-alpha-glucanotransferase) PAB0118 - Pyrococcus
abyssi (strain Orsay) >gi|5457609|emb|CAB49100.1|
(AJ248283) Alpha-amylase (or
4-alpha-glucanotransferase) [Pyrococcus abyssi]
Length = 655
Score = 1359 bits (3479), Expect = 0.0
Identities = 655/655 (100%), Positives = 655/655 (100%)
Query: 1 MPRINFIFGIHNHQPLGNFGWVMEEAYEKAYRPFLEILEEYPNMKVAIHISGILVEWLEE 60
MPRINFIFGIHNHQPLGNFGWVMEEAYEKAYRPFLEILEEYPNMKVAIHISGILVEWLEE
Sbjct: 1 MPRINFIFGIHNHQPLGNFGWVMEEAYEKAYRPFLEILEEYPNMKVAIHISGILVEWLEE 60
Query: 61 NKPDYIDLLKSLVRKGQVEIVVAGFYEPVLAAIPKEDRLEQIYLLKEWAKKIGYDAKGLW 120
NKPDYIDLLKSLVRKGQVEIVVAGFYEPVLAAIPKEDRLEQIYLLKEWAKKIGYDAKGLW
Sbjct: 61 NKPDYIDLLKSLVRKGQVEIVVAGFYEPVLAAIPKEDRLEQIYLLKEWAKKIGYDAKGLW 120
Query: 121 LTERVWQPELVKTLREAGIEYVVVDDYHFMSAGLSKDQLFWPYYTEDGGEVITVFPIDEK 180
LTERVWQPELVKTLREAGIEYVVVDDYHFMSAGLSKDQLFWPYYTEDGGEVITVFPIDEK
Sbjct: 121 LTERVWQPELVKTLREAGIEYVVVDDYHFMSAGLSKDQLFWPYYTEDGGEVITVFPIDEK 180
Query: 181 LRYLIPFRPVDKVISYLHSLASEDESKVAVFHDDGEKFGIWPMTYEWVYEKGWLREFFDR 240
LRYLIPFRPVDKVISYLHSLASEDESKVAVFHDDGEKFGIWPMTYEWVYEKGWLREFFDR
Sbjct: 181 LRYLIPFRPVDKVISYLHSLASEDESKVAVFHDDGEKFGIWPMTYEWVYEKGWLREFFDR 240
Query: 241 VSSDEAINIMLYSEYLQKFKPKGLVYLPIASYFEMSEWSLPAQQAKLFVEFVEKLKELNM 300
VSSDEAINIMLYSEYLQKFKPKGLVYLPIASYFEMSEWSLPAQQAKLFVEFVEKLKELNM
Sbjct: 241 VSSDEAINIMLYSEYLQKFKPKGLVYLPIASYFEMSEWSLPAQQAKLFVEFVEKLKELNM 300
Query: 301 FERYRVFVRGGIWKNFFYKYPEANYMHKRMLMLSRLLRDNPSARRFVLRAQCNDAYWHGV 360
FERYRVFVRGGIWKNFFYKYPEANYMHKRMLMLSRLLRDNPSARRFVLRAQCNDAYWHGV
Sbjct: 301 FERYRVFVRGGIWKNFFYKYPEANYMHKRMLMLSRLLRDNPSARRFVLRAQCNDAYWHGV 360
Query: 361 FGGIYLPHLRRAIWSNLIKAHSHLEPKNKILDVDFDGREEVFLENDNFIIVVKPHYGGSI 420
FGGIYLPHLRRAIWSNLIKAHSHLEPKNKILDVDFDGREEVFLENDNFIIVVKPHYGGSI
Sbjct: 361 FGGIYLPHLRRAIWSNLIKAHSHLEPKNKILDVDFDGREEVFLENDNFIIVVKPHYGGSI 420
Query: 421 FELSSKRRAVNYADVIARRWEHYHNLGESESDDNENQEGVSSIHEIGKRIPEDIRKELAY 480
FELSSKRRAVNYADVIARRWEHYHNLGESESDDNENQEGVSSIHEIGKRIPEDIRKELAY
Sbjct: 421 FELSSKRRAVNYADVIARRWEHYHNLGESESDDNENQEGVSSIHEIGKRIPEDIRKELAY 480
Query: 481 DRYRRGILQDHFFSANETLDRYRLAKYWELGDFIEGVYNYEVGNGLVLWRRGKVLNVTVD 540
DRYRRGILQDHFFSANETLDRYRLAKYWELGDFIEGVYNYEVGNGLVLWRRGKVLNVTVD
Sbjct: 481 DRYRRGILQDHFFSANETLDRYRLAKYWELGDFIEGVYNYEVGNGLVLWRRGKVLNVTVD 540
Query: 541 VKKSIEVREDGFSVRYTVLSEEDIEALFGIELNIAVHSIKESPEELIGKRIKVNDKYGVG 600
VKKSIEVREDGFSVRYTVLSEEDIEALFGIELNIAVHSIKESPEELIGKRIKVNDKYGVG
Sbjct: 541 VKKSIEVREDGFSVRYTVLSEEDIEALFGIELNIAVHSIKESPEELIGKRIKVNDKYGVG 600
Query: 601 EFEIVLNKKARIWKYPVKTLSQSEAGWDYIQQGVSYTIIYPINGRLDIELYFREL 655
EFEIVLNKKARIWKYPVKTLSQSEAGWDYIQQGVSYTIIYPINGRLDIELYFREL
Sbjct: 601 EFEIVLNKKARIWKYPVKTLSQSEAGWDYIQQGVSYTIIYPINGRLDIELYFREL 655
>dbj|BAA22063.1| (D88253) 4-alpha-glucanotransferase [Thermococcus litoralis]
Length = 659
Score = 1034 bits (2644), Expect = 0.0
Identities = 472/659 (71%), Positives = 562/659 (84%), Gaps = 4/659 (0%)
Query: 1 MPRINFIFGIHNHQPLGNFGWVMEEAYEKAYRPFLEILEEYPNMKVAIHISGILVEWLEE 60
M RINFIFGIHNHQPLGNFGWV EEAY ++YRPF+EILEE+P MKV +H SG L+EW+EE
Sbjct: 1 MERINFIFGIHNHQPLGNFGWVFEEAYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEE 60
Query: 61 NKPDYIDLLKSLVRKGQVEIVVAGFYEPVLAAIPKEDRLEQIYLLKEWAKKIGYDAKGLW 120
NKPDY+DLL+SL+++GQ+EIVVAGFYEPVLAAIPKEDRL QI +LK++A+K+GYDAKG+W
Sbjct: 61 NKPDYLDLLRSLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYARKLGYDAKGVW 120
Query: 121 LTERVWQPELVKTLREAGIEYVVVDDYHFMSAGLSKDQLFWPYYTEDGGEVITVFPIDEK 180
LTERVWQPELVK+LREAGIEYVVVDDYHFMSAGLSK++LFWPYYTEDGGEVITVFPIDEK
Sbjct: 121 LTERVWQPELVKSLREAGIEYVVVDDYHFMSAGLSKEELFWPYYTEDGGEVITVFPIDEK 180
Query: 181 LRYLIPFRPVDKVISYLHSLASEDESKVAVFHDDGEKFGIWPMTYEWVYEKGWLREFFDR 240
LRYLIPFRPV K I YL SL S+D SKVAVFHDDGEKFG+WP TYEWVYEKGWLREFFD
Sbjct: 181 LRYLIPFRPVKKTIEYLESLTSDDPSKVAVFHDDGEKFGVWPGTYEWVYEKGWLREFFDA 240
Query: 241 VSSDEAINIMLYSEYLQKFKPKGLVYLPIASYFEMSEWSLPAQQAKLFVEFVEKLKELNM 300
++S+E IN+M YSEYL KF P+GLVYLPIASYFEMSEWSLPA+QAKLFVEFVE+LKE
Sbjct: 241 ITSNEKINLMTYSEYLSKFTPRGLVYLPIASYFEMSEWSLPAKQAKLFVEFVEQLKEEGK 300
Query: 301 FERYRVFVRGGIWKNFFYKYPEANYMHKRMLMLSRLLRDNPSARRFVLRAQCNDAYWHGV 360
FE+YRVFVRGGIWKNFF+KYPE+N+MHKRMLM+S+ +RDNP AR+++L+AQCNDAYWHGV
Sbjct: 301 FEKYRVFVRGGIWKNFFFKYPESNFMHKRMLMVSKAVRDNPEARKYILKAQCNDAYWHGV 360
Query: 361 FGGIYLPHLRRAIWSNLIKAHSHLEPKNKILDVDFDGREEVFLENDNFIIVVKPHYGGSI 420
FGGIYLPHLRR +W N+IKA +L+P+NKILDVDFDGR E+ +END FI +KPHYGGSI
Sbjct: 361 FGGIYLPHLRRTVWENIIKAQRYLKPENKILDVDFDGRAEIMVENDGFIATIKPHYGGSI 420
Query: 421 FELSSKRRAVNYADVIARRWEHYHNLGESESDDNENQEGVSSIHEIGKRIPEDIRKELAY 480
FELSSKR+AVNY DV+ RRWEHYH + E+ + E++EG++SIHE+GK+IPE+IR+ELAY
Sbjct: 421 FELSSKRKAVNYNDVLPRRWEHYHEVPEATKPEKESEEGIASIHELGKQIPEEIRRELAY 480
Query: 481 DRYRRGILQDHFFSANETLDRYRLAKYWELGDFIEGVYNYE-VGNGLVLWRRGKVL---N 536
D R ILQDHF ETLD YRL KY ELGDF+ Y YE + NG+ LWR G V
Sbjct: 481 DWQLRAILQDHFIKPEETLDNYRLVKYHELGDFVNQPYEYEMIENGVKLWREGGVYAEEK 540
Query: 537 VTVDVKKSIEVREDGFSVRYTVLSEEDIEALFGIELNIAVHSIKESPEELIGKRIKVNDK 596
+ V+K IE+ EDGF +Y VL E+ +ALFG+E+N+AVHS+ E PEE K +VND
Sbjct: 541 IPARVEKKIELTEDGFIAKYRVLLEKPYKALFGVEINLAVHSVMEKPEEFEAKEFEVNDP 600
Query: 597 YGVGEFEIVLNKKARIWKYPVKTLSQSEAGWDYIQQGVSYTIIYPINGRLDIELYFREL 655
YG+G+ I L+K A++WK+P+KTLSQSEAGWD+IQQGVSYT+++PI L+ + FREL
Sbjct: 601 YGIGKVRIELDKAAKVWKFPIKTLSQSEAGWDFIQQGVSYTMLFPIEKELEFTVRFREL 659
>dbj|BAA22062.1| (D87907) 4-alpha-glucanotransferase [Pyrococcus sp.]
Length = 653
Score = 1021 bits (2612), Expect = 0.0
Identities = 466/656 (71%), Positives = 564/656 (85%), Gaps = 4/656 (0%)
Query: 1 MPRINFIFGIHNHQPLGNFGWVMEEAYEKAYRPFLEILEEYPNMKVAIHISGILVEWLEE 60
M +NFIFGIHNHQPLGNFGWVME AYE++YRPF+E LEEYPNMKVA+H SG L+EW+ +
Sbjct: 1 MEMVNFIFGIHNHQPLGNFGWVMESAYERSYRPFMETLEEYPNMKVAVHYSGPLLEWIRD 60
Query: 61 NKPDYIDLLKSLVRKGQVEIVVAGFYEPVLAAIPKEDRLEQIYLLKEWAKKIGYDAKGLW 120
NKP+++DLL+SLV++GQ+EIVVAGFYEPVLA+IPKEDR+ QI LKE+A+ +GY+A+G+W
Sbjct: 61 NKPEHLDLLRSLVKRGQLEIVVAGFYEPVLASIPKEDRIVQIEKLKEFARNLGYEARGVW 120
Query: 121 LTERVWQPELVKTLREAGIEYVVVDDYHFMSAGLSKDQLFWPYYTEDGGEVITVFPIDEK 180
LTERVWQPELVK+LR AGI+YV+VDDYHFMSAGLSKD+LFWPYYTEDGGEVITVFPIDEK
Sbjct: 121 LTERVWQPELVKSLRAAGIDYVIVDDYHFMSAGLSKDELFWPYYTEDGGEVITVFPIDEK 180
Query: 181 LRYLIPFRPVDKVISYLHSLASEDESKVAVFHDDGEKFGIWPMTYEWVYEKGWLREFFDR 240
LRYLIPFRPVDK + YLHSL DESKVAVFHDDGEKFG+WP TYEWVYEKGWLREFFDR
Sbjct: 181 LRYLIPFRPVDKTLEYLHSLDDGDESKVAVFHDDGEKFGVWPGTYEWVYEKGWLREFFDR 240
Query: 241 VSSDEAINIMLYSEYLQKFKPKGLVYLPIASYFEMSEWSLPAQQAKLFVEFVEKLKELNM 300
VSSDE IN+MLYSEYLQ+F+P+GLVYLPIASYFEMSEWSLPA+QAKLFVEFVE+LK+ N
Sbjct: 241 VSSDERINLMLYSEYLQRFRPRGLVYLPIASYFEMSEWSLPARQAKLFVEFVEELKKENK 300
Query: 301 FERYRVFVRGGIWKNFFYKYPEANYMHKRMLMLSRLLRDNPSARRFVLRAQCNDAYWHGV 360
F+RYRVFVRGGIWKNFF+KYPE+NYMHKRMLM+S+ +R+NP AR F+LRAQCNDAYWHGV
Sbjct: 301 FDRYRVFVRGGIWKNFFFKYPESNYMHKRMLMVSKAVRNNPEAREFILRAQCNDAYWHGV 360
Query: 361 FGGIYLPHLRRAIWSNLIKAHSHLEPKNKILDVDFDGREEVFLENDNFIIVVKPHYGGSI 420
FGG+YLPHLRRA+W N+IKA SH++ N + D+DFDGR+EVF+EN+NF V KP YGG++
Sbjct: 361 FGGVYLPHLRRAVWENIIKAQSHVKTGNFVRDIDFDGRDEVFIENENFYAVFKPAYGGAL 420
Query: 421 FELSSKRRAVNYADVIARRWEHYHNLGESESDDNENQEGVSSIHEIGKRIPEDIRKELAY 480
FELSSKR+AVNY DV+ARRWEHYH + E+ + + E EGV+SIHE+GK+IP++IR+ELAY
Sbjct: 421 FELSSKRKAVNYNDVLARRWEHYHEVPEAATPE-EGGEGVASIHELGKQIPDEIRRELAY 479
Query: 481 DRYRRGILQDHFFSANETLDRYRLAKYWELGDFIEGVYNYE-VGNGLVLWRRGKVLNVTV 539
D + R ILQDHF TLD YRL++Y ELGDF+ G YN+ + NG+ L R G V
Sbjct: 480 DSHLRAILQDHFLEPETTLDEYRLSRYIELGDFLTGAYNFSLIENGITLERDGSVAKRPA 539
Query: 540 DVKKSIEVREDGFSVRYTVLSEEDIEALFGIELNIAVHSIKESPEELIGKRIKVNDKYGV 599
V+KS+ + EDGF V YTV S D ALFG+ELN+AVHS+ E P E ++ +VND YG+
Sbjct: 540 RVEKSVRLTEDGFIVDYTVRS--DARALFGVELNLAVHSVMEEPAEFEAEKFEVNDPYGI 597
Query: 600 GEFEIVLNKKARIWKYPVKTLSQSEAGWDYIQQGVSYTIIYPINGRLDIELYFREL 655
G+ EI L+++A++WKYP+KTLSQSE+GWD+IQQGVSYT+++P+ G L L FREL
Sbjct: 598 GKVEIELDRRAKVWKYPIKTLSQSESGWDFIQQGVSYTVLFPVEGELRFRLRFREL 653
>sp|O57932|AMY_PYRHO ALPHA-AMYLASE >gi|7435332|pir||G71241 probable alpha-amylase -
Pyrococcus horikoshii >gi|3256579|dbj|BAA29262.1|
(AP000001) 633aa long hypothetical alpha-amylase
[Pyrococcus horikoshii]
Length = 633
Score = 994 bits (2542), Expect = 0.0
Identities = 450/654 (68%), Positives = 555/654 (84%), Gaps = 23/654 (3%)
Query: 1 MPRINFIFGIHNHQPLGNFGWVMEEAYEKAYRPFLEILEEYPNMKVAIHISGILVEWLEE 60
MPRINFIFG+HNHQPLGNF W+++ AYEKAYRPFLE LEEYPNMKVA+HISG+LVEWLE
Sbjct: 1 MPRINFIFGVHNHQPLGNFEWIIKRAYEKAYRPFLETLEEYPNMKVAVHISGVLVEWLER 60
Query: 61 NKPDYIDLLKSLVRKGQVEIVVAGFYEPVLAAIPKEDRLEQIYLLKEWAKKIGYDAKGLW 120
N+P+YIDLLKSL++KGQVE+VVAGFYEP+L AIP+EDR+EQI L K WA+K+GY+A+GLW
Sbjct: 61 NRPEYIDLLKSLIKKGQVELVVAGFYEPILVAIPEEDRVEQIKLSKGWARKMGYEARGLW 120
Query: 121 LTERVWQPELVKTLREAGIEYVVVDDYHFMSAGLSKDQLFWPYYTEDGGEVITVFPIDEK 180
LTERVW+PELVKTLREAGIEYV++DDYHFMSAGLSK++LFWPYYTE+GGE I VFPIDEK
Sbjct: 121 LTERVWEPELVKTLREAGIEYVILDDYHFMSAGLSKEELFWPYYTENGGEAIVVFPIDEK 180
Query: 181 LRYLIPFRPVDKVISYLHSLASEDESKVAVFHDDGEKFGIWPMTYEWVYEKGWLREFFDR 240
LRYLIPFRPV++ + YLHSLA EDESKVAVFHDDGEKFG WP T+E VYE+GWL+EFFDR
Sbjct: 181 LRYLIPFRPVNETLEYLHSLADEDESKVAVFHDDGEKFGAWPGTHELVYERGWLKEFFDR 240
Query: 241 VSSDEAINIMLYSEYLQKFKPKGLVYLPIASYFEMSEWSLPAQQAKLFVEFVEKLKELNM 300
+SSD+ IN+MLYSEYL KF+PKGLVYLPIASYFEMSEWSLPA+QAKLF EF++KLKELN+
Sbjct: 241 ISSDDKINLMLYSEYLSKFRPKGLVYLPIASYFEMSEWSLPARQAKLFFEFIKKLKELNL 300
Query: 301 FERYRVFVRGGIWKNFFYKYPEANYMHKRMLMLSRLLRDNPSARRFVLRAQCNDAYWHGV 360
FE+YR+FVRGGIWKNF YKYPE NYMHKRMLMLS+LLR+NP+AR FVLRAQCNDAYWHGV
Sbjct: 301 FEKYRIFVRGGIWKNFLYKYPEGNYMHKRMLMLSKLLRNNPTARIFVLRAQCNDAYWHGV 360
Query: 361 FGGIYLPHLRRAIWSNLIKAHSHLEPKNKILDVDFDGREEVFLENDNFIIVVKPHYGGSI 420
FGGIYLPH+RRA+W NLIKAHS+LEP+N++ D+DFDG EE+ LEN+NFI+VVKPHYGG+I
Sbjct: 361 FGGIYLPHIRRAVWRNLIKAHSYLEPENRVFDLDFDGGEEIMLENENFILVVKPHYGGAI 420
Query: 421 FELSSKRRAVNYADVIARRWEHYHNLGESESDDNENQEGVSSIHEIGKRIPEDIRKELAY 480
FE+SSK++ VNY DV+ARRWEHYH+L K IPE +++EL+Y
Sbjct: 421 FEMSSKKKYVNYLDVVARRWEHYHSL---------------------KDIPEGMKRELSY 459
Query: 481 DRYRRGILQDHFFSANETLDRYRLAKYWELGDFIEGVYNYEVGNGLVLWRRGKVLNVTVD 540
D++ RG+LQDHF E LD Y L+KY ELGDF+ Y+Y++ + L LWR GKV ++V+
Sbjct: 460 DKWPRGMLQDHFLLPTEVLDNYMLSKYRELGDFLMSSYHYQIEDKLRLWRSGKVKGISVE 519
Query: 541 VKKSIEVREDGFSVRYTVLSEEDIEALFGIELNIAVHSIKESPEELIGKRIKVNDKYGVG 600
V+K + + +DGF+ Y ++S+E++ +FG+E+N+AV E P E + K I+V D + G
Sbjct: 520 VEKVLRLNKDGFTTEYRIVSKEELGLMFGVEINLAVQGTVEYPAEFMSKEIEVKDIF--G 577
Query: 601 EFEIVLNKKARIWKYPVKTLSQSEAGWDYIQQGVSYTIIYPINGRLDIELYFRE 654
+ +I K+A+IWK+P+KTLSQSE+GWD++QQGVSYT +YPI L+I+L F+E
Sbjct: 578 KVKIESEKEAKIWKFPIKTLSQSESGWDFVQQGVSYTFLYPIEKMLNIKLKFKE 631
>sp|P49067|AMY_PYRFU ALPHA-AMYLASE >gi|1361921|pir||A49512 alpha-amylase (EC 3.2.1.1) -
Pyrococcus furiosus >gi|347940|gb|AAA72035.1| (L22346)
alpha-amylase [Pyrococcus furiosus]
Length = 649
Score = 956 bits (2444), Expect = 0.0
Identities = 444/652 (68%), Positives = 541/652 (82%), Gaps = 9/652 (1%)
Query: 3 RINFIFGIHNHQPLGNFGWVMEEAYEKAYRPFLEILEEYPNMKVAIHISGILVEWLEENK 62
+INFIFGIHNHQPLGNFGWV EEAYEK Y PFLE LEEYPNMKVAIH SG L+EWL++N+
Sbjct: 4 KINFIFGIHNHQPLGNFGWVFEEAYEKCYWPFLETLEEYPNMKVAIHTSGPLIEWLQDNR 63
Query: 63 PDYIDLLKSLVRKGQVEIVVAGFYEPVLAAIPKEDRLEQIYLLKEWAKKIGYDAKGLWLT 122
P+YIDLL+SLV++GQVEIVVAGFYEPVLA+IPKEDR+EQI L+KEWAK IG+DA+G+WLT
Sbjct: 64 PEYIDLLRSLVKRGQVEIVVAGFYEPVLASIPKEDRIEQIRLMKEWAKSIGFDARGVWLT 123
Query: 123 ERVWQPELVKTLREAGIEYVVVDDYHFMSAGLSKDQLFWPYYTEDGGEVITVFPIDEKLR 182
ERVWQPELVKTL+E+GI+YV+VDDYHFMSAGLSK++L+WPYYTEDGGEVI VFPIDEKLR
Sbjct: 124 ERVWQPELVKTLKESGIDYVIVDDYHFMSAGLSKEELYWPYYTEDGGEVIAVFPIDEKLR 183
Query: 183 YLIPFRPVDKVISYLHSLASEDESKVAVFHDDGEKFGIWPMTYEWVYEKGWLREFFDRVS 242
YLIPFRPVDKV+ YLHSL DESKVAVFHDDGEKFGIWP TYEWVYEKGWLREFFDR+S
Sbjct: 184 YLIPFRPVDKVLEYLHSLIDGDESKVAVFHDDGEKFGIWPGTYEWVYEKGWLREFFDRIS 243
Query: 243 SDEAINIMLYSEYLQKFKPKGLVYLPIASYFEMSEWSLPAQQAKLFVEFVEKLKELNMFE 302
SDE IN+MLY+EYL+K+KP+GLVYLPIASYFEMSEWSLPA+QA+LFVEFV +LK +FE
Sbjct: 244 SDEKINLMLYTEYLEKYKPRGLVYLPIASYFEMSEWSLPAKQARLFVEFVNELKVKGIFE 303
Query: 303 RYRVFVRGGIWKNFFYKYPEANYMHKRMLMLSRLLRDNPSARRFVLRAQCNDAYWHGVFG 362
+YRVFVRGGIWKNFFYKYPE+NYMHKRMLM+S+L+R+NP AR+++LRAQCNDAYWHG+FG
Sbjct: 304 KYRVFVRGGIWKNFFYKYPESNYMHKRMLMVSKLVRNNPEARKYLLRAQCNDAYWHGLFG 363
Query: 363 GIYLPHLRRAIWSNLIKAHSHLEPKNKILDVDFDGREEVFLENDNFIIVVKPHYGGSIFE 422
G+YLPHLRRAIW+NLIKA+S++ I D+D+DG EEV +ENDNF V KP YGGS+ E
Sbjct: 364 GVYLPHLRRAIWNNLIKANSYVSLGKVIRDIDYDGFEEVLIENDNFYAVFKPSYGGSLVE 423
Query: 423 LSSKRRAVNYADVIARRWEHYHNLGESESDDNENQEGVSSIHEIGKRIPEDIRKELAYDR 482
SSK R VNY DV+ARRWEHYH ES+ D GV+SIHE+ K+IP++IRKE+AYD+
Sbjct: 424 FSSKNRLVNYVDVLARRWEHYHGYVESQFD------GVASIHELEKKIPDEIRKEVAYDK 477
Query: 483 YRRGILQDHFFSANETLDRYRLAKYWELGDFIEGVYNYEVGNGLVLWRRGKVLNVTVDVK 542
YRR +LQDH TL+ + ++ E+G+F Y+YE+ +G + +R ++ ++V+
Sbjct: 478 YRRFMLQDHVVPLGTTLEDFMFSRQQEIGEFPRVPYSYELLDGGIRLKRE---HLGIEVE 534
Query: 543 KSIEVREDGFSVRYTVLSEEDIEALFGIELNIAVHSIKESPEELIGKRIKVNDKYGVGEF 602
K++++ DGF V Y V ++ LF +ELN+AV SI ESP L GK I V+DKY VG+F
Sbjct: 535 KTVKLVNDGFEVEYIVNNKTGNPVLFAVELNVAVQSIMESPGVLRGKEIVVDDKYAVGKF 594
Query: 603 EIVLNKKARIWKYPVKTLSQSEAGWDYIQQGVSYTIIYPINGRLDIELYFRE 654
+ + +WKYPVKTLSQSE+GWD IQQGVSY + + ++ +L F E
Sbjct: 595 ALKFEDEMEVWKYPVKTLSQSESGWDLIQQGVSYIVPIRLEDKIRFKLKFEE 646
>sp|P09961|AMY1_DICTH ALPHA-AMYLASE 1 (1,4-ALPHA-D-GLUCAN GLUCANOHYDROLASE)
>gi|67391|pir||ALDYAT amylase A (EC 3.2.1.-) -
Dictyoglomus thermophilum >gi|2689|emb|CAA30735.1|
(X07896) amylase (AA -1 to 685) [Dictyoglomus
thermophilum]
Length = 686
Score = 483 bits (1231), Expect = e-135
Identities = 272/674 (40%), Positives = 401/674 (59%), Gaps = 42/674 (6%)
Query: 4 INFIFGIHNHQPLGNFGWVMEEAYEKAYRPFLEILEEYPNMKVAIHISGILVEWLEENKP 63
I F GIHNHQP+GNF +V+E AYE +Y+P + ++P+ + +H SG L+ WLE+N P
Sbjct: 5 IYFSLGIHNHQPVGNFDFVIERAYEMSYKPLINFFFKHPDFPINVHFSGFLLLWLEKNHP 64
Query: 64 DYIDLLKSLVRKGQVEIVVAGFYEPVLAAIPKEDRLEQIYLLKEWA-KKIGYDAKGLWLT 122
+Y + LK + +GQ+E V GFYEP+L IP +D+++QI L ++ K G KG+WL
Sbjct: 65 EYFEKLKIMAERGQIEFVSGGFYEPILPIIPDKDKVQQIKKLNKYIYDKFGQTPKGMWLA 124
Query: 123 ERVWQPELVKTLREAGIEYVVVDDYHFMSAGLSKDQLFWPYYTEDGGEVITVFPIDEKLR 182
ERVW+P LVK + EAGIEYVVVDD HF S GL ++ LF Y E+ G + VFPI KLR
Sbjct: 125 ERVWEPHLVKYIAEAGIEYVVVDDAHFFSVGLKEEDLFGYYLMEEQGYKLAVFPISMKLR 184
Query: 183 YLIPFRPVDKVISYLHSLASEDESKVAVFHDDGEKFGIWPMTYEWVYEKGWLREFFDRVS 242
YLIPF ++ I+YL ASED+SK+A+ DDGEKFG+WP TY VYE+GWL F ++
Sbjct: 185 YLIPFADPEETITYLDKFASEDKSKIALLFDDGEKFGLWPDTYRTVYEEGWLETFVSKIK 244
Query: 243 SDEAI--NIMLYSEYLQKFKPKGLVYLPIASYFEMSEWSLPAQQAKLFVEFVEKLKELNM 300
+ + + LY+ Y+Q+ KPKG +YLP ASY EM EW L + K E VEKLK N+
Sbjct: 245 ENFLLVTPVNLYT-YMQRVKPKGRIYLPTASYREMMEWVLFPEAQKELEELVEKLKTENL 303
Query: 301 FERYRVFVRGGIWKNFFYKYPEANYMHKRMLMLSRLLRDNPS------ARRFVLRAQCND 354
++++ +V+GG W+NF KY E+N+M K+ML + + ++D+P+ A V + Q ND
Sbjct: 304 WDKFSPYVKGGFWRNFLAKYDESNHMQKKMLYVWKKVQDSPNEEVKEKAMEEVFQGQAND 363
Query: 355 AYWHGVFGGIYLPHLRRAIWSNLIKAHSHLEPKN---KILDVDFDGREEVFLENDNFIIV 411
AYWHG+FGG+YLPHLR AI+ +LIKA ++LE I D D DG +E+ +E+ F +
Sbjct: 364 AYWHGIFGGLYLPHLRTAIYEHLIKAENYLENSEIRFNIFDFDCDGNDEIIVESPFFNLY 423
Query: 412 VKPHYGGSIFELSSKRRAVNYADVIARRWEHYHNLGESESDDNENQEGVSSIHEIGKRIP 471
+ P++GGS+ E K +A N +V+ RR E YH+ + + + + SIHE
Sbjct: 424 LSPNHGGSVLEWDFKTKAFNLTNVLTRRKEAYHSKLSYVTSEAQGK----SIHERWTAKE 479
Query: 472 EDIRKELAYDRYRRGILQDHFFSANETL-DRYRLAKYWELGDFIEGVYNYEVG---NGLV 527
E + L YD +RR + F + L D ++ + E+ F E Y+YE+ N +
Sbjct: 480 EGLENILFYDNHRRVSFTEKIFESEPVLEDLWKDSSRLEVDSFYEN-YDYEINKDENKIR 538
Query: 528 LWRRGKVLNVTVDVKKSIEVREDGF-SVRYTV--LSEEDIEALFGIELNIAVHSIKESPE 584
+ G + K I ++ F V Y + +SE I FG E+N+ + P+
Sbjct: 539 VLFSGVFRGFEL-CKSYILYKDKSFVDVVYEIKNVSETPISLNFGWEINLNFLA-PNHPD 596
Query: 585 E--LIGKR---------IKVND---KYGVG-EFEIVLNKKARIWKYPVKTLSQSEAGWDY 629
LIG + KVN+ G+G E E VL+ +A +++YP++T+S SE G++
Sbjct: 597 YYFLIGDQKYPLSSFGIEKVNNWKIFSGIGIELECVLDVEASLYRYPIETVSLSEEGFER 656
Query: 630 IQQGVSYTIIYPIN 643
+ QG + Y ++
Sbjct: 657 VYQGSALIHFYKVD 670
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.321 0.141 0.433
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 263686440
Number of Sequences: 2977
Number of extensions: 11780558
Number of successful extensions: 27641
Number of sequences better than 1.0e-10: 6
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27614
Number of HSP's gapped (non-prelim): 6
length of query: 655
length of database: 189,106,746
effective HSP length: 53
effective length of query: 602
effective length of database: 157,386,935
effective search space: 94746934870
effective search space used: 94746934870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 168 (69.9 bits)