BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0119 (malE) DE:MALTOSE-BINDING PERIPLASMIC PROTEIN PRECURSOR
(MALTODEXTRIN-BINDING PROTEIN) (MMBP)
(453 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F75206 maltose-binding periplasmic protein precursor (malt... 949 0.0
dbj|BAB18102.1| (AB034969) cyclomaltodextrin binding protein [Th... 557 e-158
pir||B72283 maltose ABC transporter, periplasmic maltose-binding... 191 2e-47
pir||G75503 maltose ABC transporter, periplasmic maltose-binding... 178 9e-44
pir||B72204 maltose ABC transporter, periplasmic maltose-binding... 178 1e-43
emb|CAA72193.1| (Y11359) putative periplasmic maltose-binding pr... 176 3e-43
emb|CAB65651.1| (AJ252161) maltose binding protein [Alicyclobaci... 142 9e-33
gb|AAB86559.1| (AF031088) maltose binding protein-lacZ alpha pep... 138 2e-31
pdb|1MDP|1 Chain 1, Maltodextrin-Binding Protein (Male178 Mutant... 137 2e-31
sp|P02928|MALE_ECOLI MALTOSE-BINDING PERIPLASMIC PROTEIN PRECURS... 135 9e-31
gb|AAB87675.1| (AF031813) maltose binding protein-lacZ-alpha fus... 135 1e-30
pdb|3MBP| Maltodextrin-Binding Protein With Bound Maltotriose ... 134 2e-30
pdb|1A7L|A Chain A, Dominant B-Cell Epitope From The Pres2 Regio... 134 2e-30
gb|AAC83813.1| (AF097412) maltose binding protein [Expression ve... 134 2e-30
sp|P19576|MALE_SALTY MALTOSE-BINDING PERIPLASMIC PROTEIN PRECURS... 134 3e-30
pdb|1IUD| Maltodextrin-Binding Protein InsertionDELETION MUTAN... 133 3e-30
pdb|1MDQ| Maltodextrin-Binding Protein (Male322) (Maltose-Bind... 133 5e-30
pdb|1MG1|A Chain A, Htlv-1 Gp21 EctodomainMALTOSE-Binding Protei... 133 5e-30
pir||H82397 maltose ABC transporter, periplasmic maltose-binding... 133 5e-30
pir||T46750 trehalose/maltose binding protein malE [validated] -... 131 1e-29
sp|P18815|MALE_ENTAE MALTOSE-BINDING PERIPLASMIC PROTEIN PRECURS... 131 1e-29
pdb|1MPB| Maltodextrin-Binding Protein (Maltose-Binding Protei... 129 7e-29
pir||B71123 hypothetical protein PH0753 - Pyrococcus horikoshii ... 128 2e-28
dbj|BAB06645.1| (AP001517) maltose/maltodextrin transport system... 127 3e-28
gb|AAD42742.1|AF105219_3 (AF105219) putative maltose binding pro... 122 1e-26
dbj|BAB05738.1| (AP001514) maltose/maltodextrin transport system... 117 3e-25
pir||C70038 maltose/maltodextrin-binding protein homolog yvfK - ... 114 3e-24
pir||G70033 maltose/maltodextrin-binding protein homolog yvdG - ... 109 5e-23
gb|AAK41419.1| Maltose ABC transporter [Sulfolobus solfataricus] 102 1e-20
pir||S63614 malE protein homolog cymE precursor - Klebsiella oxy... 102 1e-20
sp|P29850|MALX_STRPN MALTOSE/MALTODEXTRIN-BINDING PROTEIN PRECUR... 100 5e-20
pir||E72292 glycerol-3-phosphate ABC transporter, periplasmic gl... 99 9e-20
sp|O58969|YC14_PYRHO HYPOTHETICAL ABC TRANSPORTER EXTRACELLULAR ... 93 7e-18
gb|AAA26922.1| (J01796) phosphorylase [Streptococcus pneumoniae] 92 1e-17
emb|CAA68972.1| (Y07706) putative maltose-binding pootein [Strep... 92 2e-17
dbj|BAB04963.1| (AP001511) unknown conserved protein in others [... 87 4e-16
dbj|BAB07409.1| (AP001519) sugar transport system (sugar-binding... 85 2e-15
pir||T47065 hypothetical protein [imported] - Yersinia pestis >g... 80 7e-14
dbj|BAA31541.1| (AB015670) maltose/maltodextrin-binding protein ... 78 2e-13
emb|CAB71196.1| (AL138538) putative sugar-binding protein [Strep... 75 2e-12
gb|AAC45766.1| (AF018073) periplasmic sorbitol-binding protein; ... 73 9e-12
pir||C71014 hypothetical protein PH1409 - Pyrococcus horikoshii ... 71 3e-11
pir||H83352 probable binding protein component of ABC maltose/ma... 71 3e-11
pir||S18119 malE protein homolog - Alicyclobacillus acidocaldari... 69 8e-11
>pir||F75206 maltose-binding periplasmic protein precursor
(maltodextrin-binding protein) (mmbp) PAB0119 -
Pyrococcus abyssi (strain Orsay)
>gi|5457610|emb|CAB49101.1| (AJ248283) MALTOSE-BINDING
PERIPLASMIC PROTEIN PRECURSOR (MALTODEXTRIN-BINDING
PROTEIN) (MMBP) [Pyrococcus abyssi]
Length = 453
Score = 949 bits (2426), Expect = 0.0
Identities = 453/453 (100%), Positives = 453/453 (100%)
Query: 1 MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTS 60
MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTS
Sbjct: 1 MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTS 60
Query: 61 QTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLEN 120
QTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLEN
Sbjct: 61 QTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLEN 120
Query: 121 ALKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHY 180
ALKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHY
Sbjct: 121 ALKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHY 180
Query: 181 YALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQ 240
YALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQ
Sbjct: 181 YALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQ 240
Query: 241 AFGGYYFDDKTEQPGLDKPETIEGFKFFFENIWPYMAPTADYNTQQSIFLEGRAPIMVNG 300
AFGGYYFDDKTEQPGLDKPETIEGFKFFFENIWPYMAPTADYNTQQSIFLEGRAPIMVNG
Sbjct: 241 AFGGYYFDDKTEQPGLDKPETIEGFKFFFENIWPYMAPTADYNTQQSIFLEGRAPIMVNG 300
Query: 301 PWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFT 360
PWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFT
Sbjct: 301 PWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFT 360
Query: 361 TNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGV 420
TNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGV
Sbjct: 361 TNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGV 420
Query: 421 QGAIDEILKDPKHADIEAILKKYQEEILKNMQG 453
QGAIDEILKDPKHADIEAILKKYQEEILKNMQG
Sbjct: 421 QGAIDEILKDPKHADIEAILKKYQEEILKNMQG 453
>dbj|BAB18102.1| (AB034969) cyclomaltodextrin binding protein [Thermococcus sp.
B1001]
Length = 441
Score = 557 bits (1420), Expect = e-158
Identities = 274/455 (60%), Positives = 340/455 (74%), Gaps = 17/455 (3%)
Query: 1 MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTS 60
MK+ ++A+LL+GVL VVASGCIGG T T +PT T + TTT+SPTQTT+
Sbjct: 1 MKKALFALLLIGVLAIGVVASGCIGGGGT---------TSSPTQTTQT-TTTSSPTQTTT 50
Query: 61 QTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLEN 120
T + T+T T E +VIWH + PNEL+ F+ L E+ P+++I EQK DLE
Sbjct: 51 TTSSPTQTTTTTTEEKKVTIVIWHAIGPNELKAFEDLIAEFEIEYPNIDIQLEQKADLET 110
Query: 121 ALKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHY 180
+LK AIPAGQGPDLF+WAHDWIGKFAEAGLLEPIDEYIT ++L KF+PMA+ AIEY GHY
Sbjct: 111 SLKAAIPAGQGPDLFMWAHDWIGKFAEAGLLEPIDEYITPEILNKFSPMAQNAIEYGGHY 170
Query: 181 YALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQ 240
YA+P+AAETVA+IYNK +V PPKTFDE+K +MEKYY+ YG+A P++ YF+S
Sbjct: 171 YAMPYAAETVALIYNKDMVPNPPKTFDEMKAIMEKYYNEAEGTYGLATPMDPYFLSGWVH 230
Query: 241 AFGGYYFDDKTEQPGLDKPETIEGFKFFFENIWPYMAPTADYNTQQSIFLEGRAPIMVNG 300
AFGGYYFDDKT+ PGLDKPET++GFKFFFE I+PY+A T DYN Q S+F +G+AP+M+NG
Sbjct: 231 AFGGYYFDDKTKTPGLDKPETLQGFKFFFEQIFPYVAKTQDYNAQVSLFHDGKAPMMING 290
Query: 301 PWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAA--GTHNKDAAWKFVKW 358
PWSI V++AGI+FG+ PLPPI ++ P PYGGV+LIY A KDA W F+KW
Sbjct: 291 PWSIPDVRNAGINFGIVPLPPI---DDKHRPHPYGGVRLIYVAKLNDPSKKDAIWTFLKW 347
Query: 359 FTTNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWG 418
FTTNP+VIK L+L GYIPVL+EVLNDPEI+NDPV+YGFGQAVQ+A MPKSP+MGAVWG
Sbjct: 348 FTTNPDVIKTLSLQNGYIPVLTEVLNDPEIQNDPVLYGFGQAVQYAIPMPKSPEMGAVWG 407
Query: 419 GVQGAIDEILKDPKHADIEAILKKYQEEILKNMQG 453
V AI +I+ K IE L+ Q+EIL + G
Sbjct: 408 PVGTAITDIIAGKK--TIEQALQDAQKEILDAISG 440
>pir||B72283 maltose ABC transporter, periplasmic maltose-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4981756|gb|AAD36279.1|AE001777_5 (AE001777) maltose
ABC transporter, periplasmic maltose-binding protein
[Thermotoga maritima]
Length = 391
Score = 191 bits (480), Expect = 2e-47
Identities = 127/389 (32%), Positives = 200/389 (50%), Gaps = 33/389 (8%)
Query: 79 KVVIWHNMQPNELQVFQSLAEEYMAMCP-DVEIVFEQKPDLENALKVAIPAGQGPDLFIW 137
K+ IW ++ + Q L EE+ A +VE+ + D+++ A P GQG D+ +
Sbjct: 21 KLTIW--CSEKQVDILQKLGEEFKAKYGVEVEVQYVNFQDIKSKFLTAAPEGQGADIIVG 78
Query: 138 AHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKK 197
AHDW+G+ A GL+EPI + L+ F A A Y G Y +P+A E +A+IYNK
Sbjct: 79 AHDWVGELAVNGLIEPIPNFSD---LKNFYETALNAFSYGGKLYGIPYAMEAIALIYNKD 135
Query: 198 IVSEPPKTFDELKEVMEKYYDPNNEKYG------IAWPINAYFISAIAQAFGGYYFDDKT 251
V EPPKT DEL E+ ++ +E++G I Y+I+ +GGY F K
Sbjct: 136 YVPEPPKTMDELIEIAKQI----DEEFGGEVRGFITSAAEFYYIAPFIFGYGGYVF--KQ 189
Query: 252 EQPGLDKPE-------TIEGFKFFFENIWP-YMAPTADYNTQQSIFLEGRAPIMVNGPWS 303
+ GLD + I+G K + + P+ +Y S+F EG+A +++NGPW+
Sbjct: 190 TEKGLDVNDIGLANEGAIKGVKLLKRLVDEGILDPSDNYQIMDSMFREGQAAMIINGPWA 249
Query: 304 IGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNP 363
I + KDAGID+GVAP+P ++ G RP+ GV+ A + NK A +F+ F
Sbjct: 250 IKAYKDAGIDYGVAPIPD-LEPGVP--ARPFVGVQGFMVNAKSPNKLLAIEFLTSFIAKK 306
Query: 364 EVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGA 423
E + ++ L +P +VL +K++P + GF + + MP P+M AVW + A
Sbjct: 307 ETMYRIYLGDPRLPSRKDVLE--LVKDNPDVVGFTLSAANGIPMPNVPQMAAVWAAMNDA 364
Query: 424 IDEILKDPKHADIEAILKKYQEEILKNMQ 452
++ ++ A +E LK E I +Q
Sbjct: 365 LNLVVNG--KATVEEALKNAVERIKAQIQ 391
>pir||G75503 maltose ABC transporter, periplasmic maltose-binding protein -
Deinococcus radiodurans (strain R1)
>gi|6458256|gb|AAF10141.1|AE001914_3 (AE001914) maltose
ABC transporter, periplasmic maltose-binding protein
[Deinococcus radiodurans]
Length = 393
Score = 178 bits (448), Expect = 9e-44
Identities = 128/390 (32%), Positives = 192/390 (48%), Gaps = 22/390 (5%)
Query: 74 ECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPD-VEIVFEQKPDLENALKVAIPAGQGP 132
+ + + +W + NEL + A+ + A + V IV DL + P GQGP
Sbjct: 15 QASAATLTVWTHFGENELVWLRDQAKTFEAKTKNKVNIVSVPFDDLTTKFLQSAPKGQGP 74
Query: 133 DLFIW-AHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVA 191
DL + AHD IG+ A AG++EP+D+Y+T A +A+ YKG + +P AE+VA
Sbjct: 75 DLIVTQAHDRIGQMAAAGVIEPMDKYVTSKT--DLDKTAVQAMTYKGKLFGIPMFAESVA 132
Query: 192 MIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPI-NAYFISAIAQAFGGYYFDDK 250
+IYNKK+V + P T++ L + N G P+ NAY A+GGY F +
Sbjct: 133 LIYNKKLVPQAPTTWNALLSAAQSAQKAGN--LGFVMPLDNAYLTYGFTSAYGGYVFKNN 190
Query: 251 -----TEQPGLDKPETIEGFKFFFENIWPYMAPTADYNTQ--QSIFLEGRAPIMVNGPWS 303
T+ GL ++ F + + Y N +S F +GRA +M++GPW
Sbjct: 191 GGTLNTKDIGLGNAGAVKAASFINDLRYKYNLIPEGINGDAVKSAFTQGRAAMMISGPWD 250
Query: 304 IGSVKDAGIDFGVAPLP-PIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTN 362
I ++ AGIDFG+AP P P GK W P+ GV+ A + NK A +F K TT
Sbjct: 251 IDDIRKAGIDFGIAPFPTPPGASGK--W-SPFVGVQGTVMNAYSKNKAVAAQFAKSITTA 307
Query: 363 PEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQG 422
I G IPV + ++K++PV+ GF + + MP P+MGAVWG
Sbjct: 308 DAQISFNTAG-GRIPV--SLAARTKLKSNPVVAGFSRTISAGTPMPNIPEMGAVWGPWTN 364
Query: 423 AIDEILKDPKHADIEAILKKYQEEILKNMQ 452
AI ++ + P + +L K EI N++
Sbjct: 365 AITQVAQKPGQ-NYSQLLTKAVGEIKGNIK 393
>pir||B72204 maltose ABC transporter, periplasmic maltose-binding protein -
Thermotoga maritima (strain MSB8)
>gi|4982422|gb|AAD36901.1|AE001821_1 (AE001821) maltose
ABC transporter, periplasmic maltose-binding protein
[Thermotoga maritima]
Length = 393
Score = 178 bits (446), Expect = 1e-43
Identities = 123/381 (32%), Positives = 190/381 (49%), Gaps = 27/381 (7%)
Query: 79 KVVIWHNMQPNELQVFQSLAEEYMAMCP-DVEIVFEQKPDLENALKVAIPAGQGPDLFIW 137
K+ IW ++ + Q L EE+ A VE+ + +++ A P GQG D+ +
Sbjct: 22 KLTIW--CSEKQVDILQKLGEEFKAKYGIPVEVQYVDFGSIKSKFLTAAPQGQGADIIVG 79
Query: 138 AHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKK 197
AHDW+G+ A GL+EPI + L+ F A +A Y G Y +P+A E VA+IYNK
Sbjct: 80 AHDWVGELAVNGLIEPIPNFSD---LKNFYDTALKAFSYGGKLYGVPYAMEAVALIYNKD 136
Query: 198 IVSEPPKTFDEL----KEVMEKYYDPNNEKYGIAWPI-NAYFISAIAQAFGGYYFDDKTE 252
V PKT DEL K++ E+Y E G + + N YF + +GGY F + +
Sbjct: 137 YVDSVPKTMDELIEKAKQIDEEY---GGEVRGFIYDVANFYFSAPFILGYGGYVFKETPQ 193
Query: 253 -----QPGLDKPETIEGFKFFFENIWP-YMAPTADYNTQQSIFLEGRAPIMVNGPWSIGS 306
GL ++G K I + P +Y T S+F EG A +++NG W+I S
Sbjct: 194 GLDVTDIGLANEGAVKGAKLIKRMIDEGVLTPGDNYGTMDSMFKEGLAAMIINGLWAIKS 253
Query: 307 VKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVI 366
KDAGI++GVAP+P ++ G +P+ GV+ A + NK A +F+ F E +
Sbjct: 254 YKDAGINYGVAPIPE-LEPGVP--AKPFVGVQGFMINAKSPNKVIAMEFLTNFIARKETM 310
Query: 367 KQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGAIDE 426
++ L +P +VL +K++P + F Q+ MP P+M VW + A+
Sbjct: 311 YKIYLADPRLPARKDVLE--LVKDNPDVVAFTQSASMGTPMPNVPEMAPVWSAMGDALSI 368
Query: 427 ILKDPKHADIEAILKKYQEEI 447
I+ A +E LK+ E+I
Sbjct: 369 IING--QASVEDALKEAVEKI 387
>emb|CAA72193.1| (Y11359) putative periplasmic maltose-binding protein [Thermotoga
maritima]
Length = 393
Score = 176 bits (443), Expect = 3e-43
Identities = 122/381 (32%), Positives = 190/381 (49%), Gaps = 27/381 (7%)
Query: 79 KVVIWHNMQPNELQVFQSLAEEYMAMCP-DVEIVFEQKPDLENALKVAIPAGQGPDLFIW 137
K+ IW ++ + Q L EE+ A VE+ + +++ A P GQG D+ +
Sbjct: 22 KLTIW--CSEKQVDILQKLGEEFKAKYGIPVEVQYVDFGSIKSKFLTAAPQGQGADIIVG 79
Query: 138 AHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKK 197
AHDW+G+ A GL+EPI + L+ F A +A Y G Y +P+A E VA+IYNK
Sbjct: 80 AHDWVGELAVNGLIEPIPNFSD---LKNFYDTALKAFSYGGKLYGVPYAMEAVALIYNKD 136
Query: 198 IVSEPPKTFDEL----KEVMEKYYDPNNEKYGIAWPI-NAYFISAIAQAFGGYYFDDKTE 252
V PKT DEL K++ E+Y E G + + N YF + +GGY F + +
Sbjct: 137 YVDSVPKTMDELIEKAKQIDEEY---GGEVRGFIYDVANFYFSAPFILGYGGYVFKETPQ 193
Query: 253 -----QPGLDKPETIEGFKFFFENIWP-YMAPTADYNTQQSIFLEGRAPIMVNGPWSIGS 306
GL ++G K I + P +Y T S+F EG A +++NG W+I S
Sbjct: 194 GLDVTDIGLANEGAVKGAKLIKRMIDEGVLTPGDNYGTMDSMFKEGLAAMIINGLWAIKS 253
Query: 307 VKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVI 366
KDAGI++GVAP+P ++ G +P+ GV+ A + NK A +F+ F E +
Sbjct: 254 YKDAGINYGVAPIPE-LEPGVP--AKPFVGVQGFMINAKSPNKVIAMEFLTNFIARKETM 310
Query: 367 KQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGAIDE 426
++ L +P +VL +K++P + F Q+ MP P+M VW + A+
Sbjct: 311 YKIYLADPRLPARKDVLE--LVKDNPDVVAFTQSASMGTPMPNVPEMAPVWSAMGDALSI 368
Query: 427 ILKDPKHADIEAILKKYQEEI 447
I+ A +E LK+ ++I
Sbjct: 369 IING--QASVEDALKEAVDKI 387
>emb|CAB65651.1| (AJ252161) maltose binding protein [Alicyclobacillus
acidocaldarius]
Length = 427
Score = 142 bits (354), Expect = 9e-33
Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 26/378 (6%)
Query: 52 TTSPTQTTSQTPTETETHTQEAECGSGKVV-IWHNMQPNELQVFQSLAEEYMAMCPDVEI 110
T++ Q TS + + + + + G+ + +W ELQ + +A ++ D I
Sbjct: 28 TSNGGQNTSPSTSSSSAKGEASALPKGQTITVWSWQTGPELQDVKQIAAQWAKAHGDKVI 87
Query: 111 VFEQKPDLENALKVAIPA--GQGPDL-FIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFA 167
V +Q + + A A G+GPD+ F HD G FAE GL+ P+ + + L +A
Sbjct: 88 VVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPVPSGVLNTGL--YA 145
Query: 168 PMAREAIEYKGHYYALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIA 227
P +AI+ G Y++P + + A+ YNKK+V +PP+T+ E + D N +G
Sbjct: 146 PNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVPQPPQTWAEFVK------DAN--AHGFM 197
Query: 228 W-PINAYFISAIAQAFGGYYFDDK--TEQP---GLDKPETIEGFKFFFENIWPY--MAPT 279
+ N YF AI +GGY F D T P GLD P ++ + + + Y M P+
Sbjct: 198 YDQANLYFDYAIIGGYGGYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHWMTPS 257
Query: 280 ADYNTQQSIFLEGRAPIMVNGPWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKL 339
+ + ++ FL G+ + V+GPW ++ A IDFGV P P + +GK P+ GV
Sbjct: 258 TNGSIAKAEFLAGKIGMYVSGPWDTADIEKAKIDFGVTPW-PTLPNGKH--ATPFLGVIT 314
Query: 340 IYFAAGTHNKDAAWKFVKWFTTNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQ 399
+ + + A W V+ T+ + + D IP L V +++ P F +
Sbjct: 315 AFVNKESKTQAADWSLVQ-ALTSAQAQQMYFRDSQQIPALLSVQRSSAVQSSPTFKAFVE 373
Query: 400 AVQHAYLMPKSPKMGAVW 417
+++A MP P+M AVW
Sbjct: 374 QLRYAVPMPNIPQMQAVW 391
>gb|AAB86559.1| (AF031088) maltose binding protein-lacZ alpha peptide fusion
protein precursor [Shuttle vector pMAL-pIII]
Length = 482
Score = 138 bits (343), Expect = 2e-31
Identities = 106/385 (27%), Positives = 173/385 (44%), Gaps = 38/385 (9%)
Query: 68 THTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVA 125
+H+ + + GK+VIW N + LAE D +++ E LE
Sbjct: 16 SHSADMKIEEGKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQV 71
Query: 126 IPAGQGPDLFIWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYAL 183
G GPD+ WAHD G +A++GLL I D+ D K P +A+ Y G A
Sbjct: 72 AATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAY 127
Query: 184 PFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFG 243
P A E +++IYNK ++ PPKT++E+ ++K + + YF + A G
Sbjct: 128 PIAVEALSLIYNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADG 186
Query: 244 GYYFDDKT-----EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIM 297
GY F + + G+D G F + I +M DY+ ++ F +G +
Sbjct: 187 GYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMT 246
Query: 298 VNGPWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVK 357
+NGPW+ ++ + +++GV LP K +P+ GV A + NK+ A +F++
Sbjct: 247 INGPWAWSNIDTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLE 302
Query: 358 WFTTNPEVIKQLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGA 415
+ E ++ + D LG + + S + E+ DP I + Q +MP P+M A
Sbjct: 303 NYLLTDEGLEAVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSA 359
Query: 416 VWGGVQGA----------IDEILKD 430
W V+ A +DE LKD
Sbjct: 360 FWYAVRTAVINAASGRQTVDEALKD 384
>pdb|1MDP|1 Chain 1, Maltodextrin-Binding Protein (Male178 Mutant)
(Maltose-Binding Protein) Mutant With Asp 134 And Pro
135 Inserted And Residues Ala 134 - Lys 142 Deleted
(Ins(D134,P135),Del(136-142)) Complexed With Maltose
>gi|809264|pdb|1MDP|2 Chain 2, Maltodextrin-Binding
Protein (Male178 Mutant) (Maltose-Binding Protein)
Mutant With Asp 134 And Pro 135 Inserted And Residues
Ala 134 - Lys 142 Deleted (Ins(D134,P135),Del(136-142))
Complexed With Maltose
Length = 363
Score = 137 bits (342), Expect = 2e-31
Identities = 106/375 (28%), Positives = 169/375 (44%), Gaps = 45/375 (12%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQGPDLF 135
GK+VIW N + LAE D +++ E LE G GPD+
Sbjct: 5 GKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 60
Query: 136 IWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMI 193
WAHD G +A++GLL I D+ D K P +A+ Y G A P A E +++I
Sbjct: 61 FWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVEALSLI 116
Query: 194 YNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDDKT-- 251
YNK ++ PPKT++E+ + + N ++ WP+ A A GGY F +
Sbjct: 117 YNKDLLPNPPKTWEEIPDPGKSALMFNLQEPYFTWPLIA--------ADGGYAFKYENGK 168
Query: 252 ---EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSV 307
+ G+D G F + I +M DY+ ++ F +G + +NGPW+ ++
Sbjct: 169 YDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNI 228
Query: 308 KDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIK 367
+ +++GV LP K +P+ GV A + NK+ A +F++ + E ++
Sbjct: 229 DTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLE 284
Query: 368 QLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGA-- 423
+ D LG + + S + E+ DP I + Q +MP P+M A W V+ A
Sbjct: 285 AVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVI 341
Query: 424 --------IDEILKD 430
+DE LKD
Sbjct: 342 NAASGRQTVDEALKD 356
>sp|P02928|MALE_ECOLI MALTOSE-BINDING PERIPLASMIC PROTEIN PRECURSOR (MALTODEXTRIN-BINDING
PROTEIN) (MMBP) >gi|72544|pir||JGECM periplasmic
maltose-binding protein precursor - Escherichia coli
>gi|396369|gb|AAC43128.1| (U00006) periplasmic
maltose-binding protein [Escherichia coli]
>gi|457109|gb|AAB59056.1| (J01648) periplasmic
maltose-binding protein [Escherichia coli]
>gi|1790466|gb|AAC77004.1| (AE000476) periplasmic
maltose-binding protein; substrate recognition for
transport and chemotaxis [Escherichia coli K12]
Length = 396
Score = 135 bits (337), Expect = 9e-31
Identities = 106/380 (27%), Positives = 170/380 (43%), Gaps = 38/380 (10%)
Query: 73 AECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQ 130
A+ GK+VIW N + LAE D +++ E LE G
Sbjct: 26 AKIEEGKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGD 81
Query: 131 GPDLFIWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAE 188
GPD+ WAHD G +A++GLL I D+ D K P +A+ Y G A P A E
Sbjct: 82 GPDIIFWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVE 137
Query: 189 TVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFD 248
+++IYNK ++ PPKT++E+ ++K + + YF + A GGY F
Sbjct: 138 ALSLIYNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFK 196
Query: 249 DKT-----EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPW 302
+ + G+D G F + I +M DY+ ++ F +G + +NGPW
Sbjct: 197 YENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPW 256
Query: 303 SIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTN 362
+ ++ + +++GV LP K +P+ GV A + NK+ A +F++ +
Sbjct: 257 AWSNIDTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLT 312
Query: 363 PEVIKQLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGV 420
E ++ + D LG + + S + E+ DP I + Q +MP P+M A W V
Sbjct: 313 DEGLEAVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAV 369
Query: 421 QGA----------IDEILKD 430
+ A +DE LKD
Sbjct: 370 RTAVINAASGRQTVDEALKD 389
>gb|AAB87675.1| (AF031813) maltose binding protein-lacZ-alpha fusion protein
[Expression vector pMal-X]
Length = 496
Score = 135 bits (336), Expect = 1e-30
Identities = 106/380 (27%), Positives = 169/380 (43%), Gaps = 38/380 (10%)
Query: 73 AECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQ 130
A GK+VIW N + LAE D +++ E LE G
Sbjct: 33 AAAEEGKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGD 88
Query: 131 GPDLFIWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAE 188
GPD+ WAHD G +A++GLL I D+ D K P +A+ Y G A P A E
Sbjct: 89 GPDIIFWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVE 144
Query: 189 TVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFD 248
+++IYNK ++ PPKT++E+ ++K + + YF + A GGY F
Sbjct: 145 ALSLIYNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFK 203
Query: 249 DKT-----EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPW 302
+ + G+D G F + I +M DY+ ++ F +G + +NGPW
Sbjct: 204 YENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPW 263
Query: 303 SIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTN 362
+ ++ + +++GV LP K +P+ GV A + NK+ A +F++ +
Sbjct: 264 AWSNIDTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLT 319
Query: 363 PEVIKQLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGV 420
E ++ + D LG + + S + E+ DP I + Q +MP P+M A W V
Sbjct: 320 DEGLEAVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAV 376
Query: 421 QGA----------IDEILKD 430
+ A +DE LKD
Sbjct: 377 RTAVINAASGRQTVDEALKD 396
>pdb|3MBP| Maltodextrin-Binding Protein With Bound Maltotriose
>gi|2982167|pdb|4MBP| Maltodextrin Binding Protein With
Bound Maltetrose >gi|2781044|pdb|1ANF| Maltodextrin
Binding Protein With Bound Maltose >gi|442835|pdb|1DMB|
D-Maltodextrin-Binding Protein >gi|494421|pdb|1OMP|
D-Maltodextrin-Binding Protein
Length = 370
Score = 134 bits (335), Expect = 2e-30
Identities = 105/375 (28%), Positives = 168/375 (44%), Gaps = 38/375 (10%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQGPDLF 135
GK+VIW N + LAE D +++ E LE G GPD+
Sbjct: 5 GKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 60
Query: 136 IWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMI 193
WAHD G +A++GLL I D+ D K P +A+ Y G A P A E +++I
Sbjct: 61 FWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVEALSLI 116
Query: 194 YNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDDKT-- 251
YNK ++ PPKT++E+ ++K + + YF + A GGY F +
Sbjct: 117 YNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGK 175
Query: 252 ---EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSV 307
+ G+D G F + I +M DY+ ++ F +G + +NGPW+ ++
Sbjct: 176 YDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNI 235
Query: 308 KDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIK 367
+ +++GV LP K +P+ GV A + NK+ A +F++ + E ++
Sbjct: 236 DTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLE 291
Query: 368 QLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGA-- 423
+ D LG + + S + E+ DP I + Q +MP P+M A W V+ A
Sbjct: 292 AVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVI 348
Query: 424 --------IDEILKD 430
+DE LKD
Sbjct: 349 NAASGRQTVDEALKD 363
>pdb|1A7L|A Chain A, Dominant B-Cell Epitope From The Pres2 Region Of Hepatitis
B Virus In The Form Of An Inserted Peptide Segment In
Maltodextrin-Binding Protein >gi|3318912|pdb|1A7L|B
Chain B, Dominant B-Cell Epitope From The Pres2 Region
Of Hepatitis B Virus In The Form Of An Inserted Peptide
Segment In Maltodextrin-Binding Protein
>gi|3318913|pdb|1A7L|C Chain C, Dominant B-Cell Epitope
From The Pres2 Region Of Hepatitis B Virus In The Form
Of An Inserted Peptide Segment In Maltodextrin-Binding
Protein
Length = 389
Score = 134 bits (335), Expect = 2e-30
Identities = 105/375 (28%), Positives = 168/375 (44%), Gaps = 38/375 (10%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQGPDLF 135
GK+VIW N + LAE D +++ E LE G GPD+
Sbjct: 5 GKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 60
Query: 136 IWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMI 193
WAHD G +A++GLL I D+ D K P +A+ Y G A P A E +++I
Sbjct: 61 FWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVEALSLI 116
Query: 194 YNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDDKT-- 251
YNK ++ PPKT++E+ ++K + + YF + A GGY F +
Sbjct: 117 YNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGK 175
Query: 252 ---EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSV 307
+ G+D G F + I +M DY+ ++ F +G + +NGPW+ ++
Sbjct: 176 YDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNI 235
Query: 308 KDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIK 367
+ +++GV LP K +P+ GV A + NK+ A +F++ + E ++
Sbjct: 236 DTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLE 291
Query: 368 QLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGA-- 423
+ D LG + + S + E+ DP I + Q +MP P+M A W V+ A
Sbjct: 292 AVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVI 348
Query: 424 --------IDEILKD 430
+DE LKD
Sbjct: 349 NAASGRQTVDEALKD 363
>gb|AAC83813.1| (AF097412) maltose binding protein [Expression vector
pMBP-parallel1]
Length = 488
Score = 134 bits (335), Expect = 2e-30
Identities = 105/375 (28%), Positives = 168/375 (44%), Gaps = 38/375 (10%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQGPDLF 135
GK+VIW N + LAE D +++ E LE G GPD+
Sbjct: 6 GKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 61
Query: 136 IWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMI 193
WAHD G +A++GLL I D+ D K P +A+ Y G A P A E +++I
Sbjct: 62 FWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVEALSLI 117
Query: 194 YNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDDKT-- 251
YNK ++ PPKT++E+ ++K + + YF + A GGY F +
Sbjct: 118 YNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGK 176
Query: 252 ---EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSV 307
+ G+D G F + I +M DY+ ++ F +G + +NGPW+ ++
Sbjct: 177 YDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNI 236
Query: 308 KDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIK 367
+ +++GV LP K +P+ GV A + NK+ A +F++ + E ++
Sbjct: 237 DTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLE 292
Query: 368 QLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGA-- 423
+ D LG + + S + E+ DP I + Q +MP P+M A W V+ A
Sbjct: 293 AVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVI 349
Query: 424 --------IDEILKD 430
+DE LKD
Sbjct: 350 NAASGRQTVDEALKD 364
>sp|P19576|MALE_SALTY MALTOSE-BINDING PERIPLASMIC PROTEIN PRECURSOR (MALTODEXTRIN-BINDING
PROTEIN) (MMBP) >gi|79095|pir||S05331 maltose-binding
protein precursor - Salmonella typhimurium
>gi|47773|emb|CAA38189.1| (X54292) malE [Salmonella
typhimurium]
Length = 396
Score = 134 bits (333), Expect = 3e-30
Identities = 108/388 (27%), Positives = 173/388 (43%), Gaps = 28/388 (7%)
Query: 73 AECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQ 130
A+ GK+VIW N + LAE D +++ E LE G
Sbjct: 26 AKIEEGKLVIWINGDKG----YNGLAEVGKKFEQDTGIKVTVEHPDKLEEKFPQVAATGD 81
Query: 131 GPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQ-KFAPMAREAIEYKGHYYALPFAAET 189
GPD+ WAHD G +A++GLL E D Q K P +A+ Y G+ A P A E
Sbjct: 82 GPDIIFWAHDRFGGYAQSGLLA---EVTPDKAFQDKLYPFTWDAVRYNGNVIAYPIAVEA 138
Query: 190 VAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDD 249
+++IYNK +V PPKT++E+ ++K + + YF + A GGY F
Sbjct: 139 LSLIYNKDLVPNPPKTWEEI-PALDKELKVKGKSAIMFNLQEPYFTWPLIAADGGYAFKF 197
Query: 250 K-----TEQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPWS 303
+ + G+D G F + I M+ DY+ ++ F +G + +NGPW+
Sbjct: 198 ENGKYDVKDVGVDNAGAKAGLTFLIDMIKNKNMSADTDYSIAEAAFNKGETAMTINGPWA 257
Query: 304 IGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNP 363
++ + +++GV LP GK +P+ GV A + NK+ A +F++ +
Sbjct: 258 WSNIDKSKVNYGVTLLPTF--KGKP--SKPFVGVLSAGINAASPNKELAKEFLENYLLTD 313
Query: 364 EVIKQLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQ 421
+ ++ + D LG + + S ++ DP I Q +MP P+M A W V+
Sbjct: 314 QGLEAVNKDKPLGAVALKS---FQEQLAKDPRIAATMDNAQKGEIMPNIPQMSAFWYAVR 370
Query: 422 GAIDEILKDPKHADIEAILKKYQEEILK 449
A+ I ++A LK Q I K
Sbjct: 371 TAV--INAASGRQTVDAALKDAQSRITK 396
>pdb|1IUD| Maltodextrin-Binding Protein InsertionDELETION MUTANT With An
Inserted B-Cell Epitope From The Pres2 Region Of
Hepatitis B Virus
Length = 380
Score = 133 bits (332), Expect = 3e-30
Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 52/387 (13%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQGPDLF 135
GK+VIW N + LAE D +++ E LE G GPD+
Sbjct: 5 GKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 60
Query: 136 IWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMI 193
WAHD G +A++GLL I D+ D K P +A+ Y G A P A E +++I
Sbjct: 61 FWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVEALSLI 116
Query: 194 YNKKIVSEPPKTFDELKE-----VMEKYY-----DPNNE--KYGIAWPINAYFISAIAQA 241
YNK ++ PPKT++E+ + V Y+ DP + + P YF + A
Sbjct: 117 YNKDLLPNPPKTWEEIPDPQDPRVRGLYFPAGGLDPGKSALMFNLQEP---YFTWPLIAA 173
Query: 242 FGGYYFDDKT-----EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAP 295
GGY F + + G+D G F + I +M DY+ ++ F +G
Sbjct: 174 DGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETA 233
Query: 296 IMVNGPWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKF 355
+ +NGPW+ ++ + +++GV LP K +P+ GV A + NK+ A +F
Sbjct: 234 MTINGPWAWSNIDTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEF 289
Query: 356 VKWFTTNPEVIKQLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKM 413
++ + E ++ + D LG + + S + E+ DP I + Q +MP P+M
Sbjct: 290 LENYLLTDEGLEAVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQM 346
Query: 414 GAVWGGVQGA----------IDEILKD 430
A W V+ A +DE LKD
Sbjct: 347 SAFWYAVRTAVINAASGRQTVDEALKD 373
>pdb|1MDQ| Maltodextrin-Binding Protein (Male322) (Maltose-Binding Protein)
Mutant With Ala 301 Replaced By Gly Ser (A301gs)
Complexed With Maltose
Length = 371
Score = 133 bits (331), Expect = 5e-30
Identities = 102/373 (27%), Positives = 165/373 (43%), Gaps = 33/373 (8%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQGPDLF 135
GK+VIW N + LAE D +++ E LE G GPD+
Sbjct: 5 GKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 60
Query: 136 IWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMI 193
WAHD G +A++GLL I D+ D K P +A+ Y G A P A E +++I
Sbjct: 61 FWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVEALSLI 116
Query: 194 YNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDDKT-- 251
YNK ++ PPKT++E+ ++K + + YF + A GGY F +
Sbjct: 117 YNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGK 175
Query: 252 ---EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSV 307
+ G+D G F + I +M DY+ ++ F +G + +NGPW+ ++
Sbjct: 176 YDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNI 235
Query: 308 KDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIK 367
+ +++GV LP K +P+ GV A + NK+ A +F++ + E ++
Sbjct: 236 DTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLE 291
Query: 368 QLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGA---- 423
+ D ++ + E+ DP I + Q +MP P+M A W V+ A
Sbjct: 292 AVNKDKPLGGSVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINA 351
Query: 424 ------IDEILKD 430
+DE LKD
Sbjct: 352 ASGRQTVDEALKD 364
>pdb|1MG1|A Chain A, Htlv-1 Gp21 EctodomainMALTOSE-Binding Protein Chimera
Length = 450
Score = 133 bits (331), Expect = 5e-30
Identities = 100/359 (27%), Positives = 163/359 (44%), Gaps = 28/359 (7%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQGPDLF 135
GK+VIW N + LAE D +++ E LE G GPD+
Sbjct: 1 GKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 56
Query: 136 IWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMI 193
WAHD G +A++GLL I D+ D K P +A+ Y G A P A E +++I
Sbjct: 57 FWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVEALSLI 112
Query: 194 YNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDDKT-- 251
YNK ++ PPKT++E+ ++K + + YF + A GGY F +
Sbjct: 113 YNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGK 171
Query: 252 ---EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSV 307
+ G+D G F + I +M DY+ ++ F +G + +NGPW+ ++
Sbjct: 172 YDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNI 231
Query: 308 KDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIK 367
+ +++GV LP K +P+ GV A + NK+ A +F++ + E ++
Sbjct: 232 DTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLE 287
Query: 368 QLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGAI 424
+ D LG + + S + E+ DP I + Q +MP P+M A W V+ A+
Sbjct: 288 AVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAV 343
>pir||H82397 maltose ABC transporter, periplasmic maltose-binding protein
VCA0945 [imported] - Vibrio cholerae (group O1 strain
N16961) >gi|9658382|gb|AAF96841.1| (AE004421) maltose
ABC transporter, periplasmic maltose-binding protein
[Vibrio cholerae]
Length = 406
Score = 133 bits (331), Expect = 5e-30
Identities = 109/407 (26%), Positives = 180/407 (43%), Gaps = 27/407 (6%)
Query: 41 TPTTTQPSPTTTTSPTQTTS-QTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAE 99
+PTT + + T + T + A G++ IW N + LAE
Sbjct: 3 SPTTQKEKDMNMKNALSTVALSTLVALGSFGAHAAIEEGQLTIWINGDKG----YNGLAE 58
Query: 100 EYMAMCPDVEI-VFEQKPD-LENALKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEY 157
D I V PD L++ G GPD+ WAHD G +AEAGLL I
Sbjct: 59 VGKKFEADTGIKVTVAHPDALQDKFPQTAATGDGPDIVFWAHDRFGGYAEAGLLVEIKP- 117
Query: 158 ITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYY 217
+ + + A +A++Y G P A E++++IYNK +V PPK+++E+ E+ K
Sbjct: 118 -SAKIQEGIVDFAWDAVKYNGKIIGYPIAVESLSLIYNKDLVPNPPKSWEEVAELDAKL- 175
Query: 218 DPNNEKYGIAWPINA-YFISAIAQAFGGYYFDDKTE-----QPGLDKPETIEGFKFFFEN 271
K I W + YF + A GGY F + G++ + F
Sbjct: 176 -KKEGKSAIMWNLKEPYFTWPLMAADGGYAFKYGVDGYDVKDAGINNKGVKDAMNFVKGL 234
Query: 272 IWP-YMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSVKDAGIDFGVAPLPPIIKDGKEYW 330
+ ++P DY+ +S F +G + +NGPWS G+++ +GI++GV LP +G+
Sbjct: 235 VDKGVISPDMDYSVSESAFNQGNTAMTINGPWSWGNIEKSGINYGVTTLPKF--NGQA-- 290
Query: 331 PRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIKQLALDLGYIPVLSEVLN--DPEI 388
+P+ GV + + NKD A +F++ + + ++ + D P+ + LN E+
Sbjct: 291 SKPFVGVLTAGISTASPNKDLAVEFIENYLLTNDGLRMVNNDK---PLGAVALNSFQREL 347
Query: 389 KNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGAIDEILKDPKHAD 435
D I + +MP P+M A W + AI I+ + D
Sbjct: 348 DADARIAATMDNAMNGEIMPNIPQMNAFWSSAKNAIINIVDGRQTVD 394
>pir||T46750 trehalose/maltose binding protein malE [validated] - Thermococcus
litoralis >gi|2828820|gb|AAC38136.1| (AF012836)
trehalose/maltose binding protein [Thermococcus
litoralis]
Length = 450
Score = 131 bits (327), Expect = 1e-29
Identities = 121/429 (28%), Positives = 186/429 (43%), Gaps = 88/429 (20%)
Query: 1 MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTS 60
+K+ + + LVGVL +VVASGCIGG QT T T TP
Sbjct: 3 VKKVLLGLFLVGVLGIAVVASGCIGGQQTSTVTSTP------------------------ 38
Query: 61 QTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKP---- 116
TET Q GK+V PNE++ ++ + E+ P V + +++
Sbjct: 39 -----TETSLQ------GKIVFAVGGAPNEIEYWKGVIAEFEKKYPGVTVELKRQATDTE 87
Query: 117 ----DLENALKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITD---DLLQKFAPM 169
DL NAL+ PD+F+ W+G+F +G LEP+D+Y+ DL F +
Sbjct: 88 QRRLDLVNALR---GKSSDPDVFLMDVAWLGQFIASGWLEPLDDYVQKDNYDLSVFFQSV 144
Query: 170 AREAIEYKGHYYALPFAAETVAMIYNKKIV-----SEPPKTFDELKEVMEKYY----DPN 220
A + G YALP + + Y K ++ S+PP+T+ EL E+ +K + N
Sbjct: 145 INLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGERETN 204
Query: 221 NEKYGIAWPINAY------FISAIAQAFGGY-YFDDKTEQPGLDKPETIEGFKFFFENIW 273
+G W Y F+ + G F D P L+KPE +E +F + I
Sbjct: 205 PNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIH 264
Query: 274 PYMAPTADYNTQQS------IFLEGRAPIMVNGP--WSIGSVKDAGI--DFGVAPLPPII 323
Y + T+ + +F +G A N P W + + D+ + GVAPLP
Sbjct: 265 KYKISPPNTYTEMTEEPVRLMFQQGNAAFERNWPYAWGLHNADDSPVKGKVGVAPLP--- 321
Query: 324 KDGKEYWPRPYGGVKL----IYFAAGTHNKDAAWKFVKWFTTNPEVIKQLALDLGYIPVL 379
++P L I + + NK AW+FVK F + V K A++LG+ P
Sbjct: 322 -----HFPGHKSAATLGGWHIGISKYSDNKALAWEFVK-FVESYSVQKGFAMNLGWNPGR 375
Query: 380 SEVLNDPEI 388
+V +DP +
Sbjct: 376 VDVYDDPAV 384
>sp|P18815|MALE_ENTAE MALTOSE-BINDING PERIPLASMIC PROTEIN PRECURSOR (MALTODEXTRIN-BINDING
PROTEIN) (MMBP) >gi|78248|pir||S05330 maltose-binding
protein precursor - Enterobacter aerogenes
Length = 396
Score = 131 bits (327), Expect = 1e-29
Identities = 109/389 (28%), Positives = 173/389 (44%), Gaps = 30/389 (7%)
Query: 73 AECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQ 130
A+ GK+VIW N + LAE D +++ E LE G
Sbjct: 26 AKIEEGKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVSVEHPDKLEEKFPQVAATGD 81
Query: 131 GPDLFIWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAE 188
GPD+ WAHD G +A++GLL I D+ D K P +A+ Y G A P A E
Sbjct: 82 GPDIIFWAHDRFGAYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPVAVE 137
Query: 189 TVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFD 248
+++IYNK +V PPKT++E+ ++K + + YF + A GGY F
Sbjct: 138 ALSLIYNKDLVPNPPKTWEEI-PALDKALKAKGKSALMFNLQEPYFTWPLIAADGGYAFK 196
Query: 249 DK-----TEQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPW 302
+ + G+D G F + I +M DY+ ++ F +G + +NGPW
Sbjct: 197 FENGKYDVKNVGVDSAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPW 256
Query: 303 SIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTN 362
+ ++ + +++GV LP GK +P+ GV A + NK+ A +F++ +
Sbjct: 257 AWSNIDKSKVNYGVTLLPTF--KGKP--SKPFVGVLSAGINAASPNKELAKEFLENYLMT 312
Query: 363 PEVIKQLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGV 420
++ + D LG + V S +++ DP I Q +MP P+M A W V
Sbjct: 313 DPGLEAVNNDKPLGAVAVKS---FQEKLEKDPRIAATMANAQKGEIMPNIPQMSAFWYAV 369
Query: 421 QGAIDEILKDPKHADIEAILKKYQEEILK 449
+ A+ I ++A LK Q I K
Sbjct: 370 RTAV--INAASARQTVDAALKDAQGRITK 396
>pdb|1MPB| Maltodextrin-Binding Protein (Maltose-Binding Protein) Mutant,
With Arginine Replacing Tryptophan At Position 230
(Trp-230-Arg), Complexed With Maltose
>gi|1311293|pdb|1MPD| Maltodextrin-Binding Protein
(Maltose-Binding Protein) Mutant, With Arginine
Replacing Tryptophan At Position 230 (Trp-230-Arg),
Complexed With Maltose >gi|1311294|pdb|1MPC|
Maltodextrin-Binding Protein (Maltose-Binding Protein)
Mutant, With Arginine Replacing Tryptophan At Position
230 (Trp-230-Arg), Complexed With Maltose
Length = 370
Score = 129 bits (321), Expect = 7e-29
Identities = 104/375 (27%), Positives = 167/375 (43%), Gaps = 38/375 (10%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPD--VEIVFEQKPDLENALKVAIPAGQGPDLF 135
GK+VIW N + LAE D +++ E LE G GPD+
Sbjct: 5 GKLVIWINGDKG----YNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDII 60
Query: 136 IWAHDWIGKFAEAGLLEPI--DEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMI 193
WAHD G +A++GLL I D+ D K P +A+ Y G A P A E +++I
Sbjct: 61 FWAHDRFGGYAQSGLLAEITPDKAFQD----KLYPFTWDAVRYNGKLIAYPIAVEALSLI 116
Query: 194 YNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDDKT-- 251
YNK ++ PPKT++E+ ++K + + YF + A GGY F +
Sbjct: 117 YNKDLLPNPPKTWEEI-PALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGK 175
Query: 252 ---EQPGLDKPETIEGFKFFFENIW-PYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSV 307
+ G+D G F + I +M DY+ ++ F +G + +NGP + ++
Sbjct: 176 YDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPRAWSNI 235
Query: 308 KDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIK 367
+ +++GV LP K +P+ GV A + NK+ A +F++ + E ++
Sbjct: 236 DTSKVNYGVTVLPTF----KGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLE 291
Query: 368 QLALD--LGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGA-- 423
+ D LG + + S + E+ DP I + Q +MP P+M A W V+ A
Sbjct: 292 AVNKDKPLGAVALKS---YEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVI 348
Query: 424 --------IDEILKD 430
+DE LKD
Sbjct: 349 NAASGRQTVDEALKD 363
>pir||B71123 hypothetical protein PH0753 - Pyrococcus horikoshii
>gi|3257161|dbj|BAA29844.1| (AP000003) 464aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 464
Score = 128 bits (318), Expect = 2e-28
Identities = 115/425 (27%), Positives = 188/425 (44%), Gaps = 63/425 (14%)
Query: 1 MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTE-TQTPEKTQTPTTTQPSPTTTTSPTQTT 59
M++ + L+ L+ S +A+GCIGG TQT TQ+P TQ+PT TQ TT + T+T
Sbjct: 4 MRKPLLVGFLILALVLSTIAAGCIGGGTTQTSPTQSPTGTQSPTPTQ----TTETITKTE 59
Query: 60 SQTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDL- 118
++T + + + A +G+ E++ +Q + E + P++++ +E +
Sbjct: 60 TKTMIQNQVFIRFAGWSAGET---------EMKNYQRMIELFEKENPNIKVKYEVITQMF 110
Query: 119 -ENALKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYK 177
EN L + AG PD+F W F E G L PI E + + KF P E +
Sbjct: 111 HENIL-ASFGAGVAPDVFYVDSSWAPIFIEKGALYPISELADESFINKFYPFLLEPFKKN 169
Query: 178 GHYYALPFAAETVAMIYNKKI-----VSEPPKTFDELKEVMEKYYDPNNEKYGIA---WP 229
G Y LP +A+ YNKK+ +++PP+T+DEL E K K G+A
Sbjct: 170 GKLYGLPKDWSMLALFYNKKLFEQAGLTKPPETWDELLE-YAKIITEKTGKPGLAIYLGG 228
Query: 230 INAYFISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFF------------ENIWPYMA 277
N Y A++ +F+ + D P E ++ + + PY+
Sbjct: 229 FNRYVPVAVSNGAPKPWFEKPEDASWFDNPVVRETLTWYINLYRKGKVEREKKGLPPYVV 288
Query: 278 PTADYNT--QQSIFLEGRAPIMVNGPWSIGSVKDA------GIDFGVAPLPPIIKDGKEY 329
D F + + ++++G W I + D G D+ +APLP GK
Sbjct: 289 APEDVGAGWLGDAFGQQKVAMVISGNWMIPFLADQFPNFKYGEDWDIAPLPA----GKN- 343
Query: 330 WPRPYGGVKLIY-----FAAGTHNKDAAWKFVKWFTTNPEVIKQLALDLGY-IPVLSEVL 383
G V ++Y + T + AWKFV+ F P K+L + G +P +
Sbjct: 344 -----GRVTMVYTVILGINSKTKHPKEAWKFVE-FILGPRGQKELVVKAGQTLPSMKGFE 397
Query: 384 NDPEI 388
NDP++
Sbjct: 398 NDPDL 402
>dbj|BAB06645.1| (AP001517) maltose/maltodextrin transport system
(maltose/maltodextrin-binding protein) [Bacillus
halodurans]
Length = 429
Score = 127 bits (316), Expect = 3e-28
Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 28/370 (7%)
Query: 80 VVIWHNMQPNELQVFQSLAEEYMAMCP-DVEIVFEQKPDLENALKVAIPAGQGPDLFIWA 138
+ +W N + +L ++ + E+Y VEI D +AL + AG GPDLF
Sbjct: 58 LTMWVNDEDAQLSAYEQIVEKYEEETGISVEITPFSMLDQLDALSLDAAAGGGPDLFFQP 117
Query: 139 HDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKKI 198
+D +G GL ++ +T + L+ + A +A+ Y+G +P ET A+ YN ++
Sbjct: 118 NDRMGDIYLQGLAAELE--LTPEQLEGYPEGAIDALNYEGAQLGIPAVIETYALFYNTEL 175
Query: 199 VSEPPKTFDELKEVMEKYYDPNNEKYG-IAWPINAYFISAIAQAFGGYYFDDKTE----- 252
V E P+TF+E++++ + + + ++YG + N Y++ +A GGY F+ E
Sbjct: 176 VPEAPETFEEMEQIAAELTNASADEYGFLMEATNFYYLYPFLEAHGGYVFEQDAEGVYDS 235
Query: 253 -QPGLDKPETIEG---FKFFFENIWPYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSVK 308
GL IEG + +FE Y+ + + F +G+ ++ GPWSI
Sbjct: 236 ASIGLANEGAIEGASLIQSWFEE--GYLPVGINGDIMSGYFRDGQVGAVITGPWSIPEFS 293
Query: 309 DA-GIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKF-VKWFTTNPEVI 366
+A G + VAPLP I +GK P + GVK + ++ + W + F TNPE
Sbjct: 294 EALGDNLAVAPLPKI--NGKN--PASFSGVK--GWLVNEYSANQYWATDLALFITNPENS 347
Query: 367 KQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGAIDE 426
G +P ++V D E++ P++ + ++A MP P M +VW ++ A +
Sbjct: 348 LTYFEVAGELPARTDVEIDDELR-QPIL----EQSEYAVPMPNIPAMSSVWEPMEDAFEF 402
Query: 427 ILKDPKHADI 436
I + A++
Sbjct: 403 ISQGEDPAEV 412
>gb|AAD42742.1|AF105219_3 (AF105219) putative maltose binding protein [Thermomonospora
curvata]
Length = 416
Score = 122 bits (302), Expect = 1e-26
Identities = 92/355 (25%), Positives = 159/355 (43%), Gaps = 24/355 (6%)
Query: 78 GKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKP--DLENALKVAIPAGQGPDLF 135
G +VIW + PN V AE + + + E P DL++ A AG PDL
Sbjct: 38 GAMVIWAD--PNRTDVLIPYAERF-GEAHGITVKVESIPNEDLQDNFVTAHQAGSPPDLV 94
Query: 136 IWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYN 195
+ AHDW G G ++P+ + + F +A +A+ ++G Y +P+A E + + N
Sbjct: 95 VGAHDWTGNLVRNGAIDPVQ--LPQKVADGFEQVALDAVTFEGQLYGVPYAMENLVLFRN 152
Query: 196 KKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPI----NAYFISAIAQAFGGYYFDDKT 251
+ E P T +EL + +K + + ++ + +AY I + + GGY F
Sbjct: 153 TDLAPEAPDTIEELIKEGKKLKESGKVEEIMSLQVGSEGDAYHIYPLYTSAGGYLFGKDD 212
Query: 252 E------QPGLDKPETIEGFKFFFE---NIWPYMAPTADYNTQQSIFLEGRAPIMVNGPW 302
E G+ +I+ F+ E + + D +F E + +++GPW
Sbjct: 213 EGNLDPSDMGVGSESSIKAFEKIAELGEKGEGALKRSIDSQNAGPLFNEAKTAFLISGPW 272
Query: 303 SIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTN 362
+I +K+AGI + ++P+P K RP+ GV+ + A+G NK A +F F T
Sbjct: 273 AIADMKEAGIPYEISPVPGFANGDK---ARPFIGVQAFFVASGGANKVFAQEFATNFVTE 329
Query: 363 PEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVW 417
E+ L P L+ L + +DP + +A + +P P+M A+W
Sbjct: 330 TELAVALYEADPRPPALTAAL-EKVSADDPDLLKIVEAGANGDPLPAIPEMAAIW 383
>dbj|BAB05738.1| (AP001514) maltose/maltodextrin transport system
(maltose/maltodextrin-binding protein) [Bacillus
halodurans]
Length = 424
Score = 117 bits (290), Expect = 3e-25
Identities = 98/368 (26%), Positives = 168/368 (45%), Gaps = 29/368 (7%)
Query: 77 SGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLENALKVAIPAGQGPDLFI 136
S +++IW + + +E + +++A+ V +V + L++ PAG GPD+F
Sbjct: 40 SNELLIWEDQEKSE-GIEEAVAQFEAEHGVTVTVVEKPYAQQLEDLRLDGPAGTGPDVFT 98
Query: 137 WAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNK 196
D IG GL + + + +D+ + A + G Y LP A ET + YNK
Sbjct: 99 MPGDQIGTAVTEGLEKEL--VMGEDIQSLYTEAAMLSQIVDGKVYGLPKAVETTMLYYNK 156
Query: 197 KIVSEPPKTFDELKEVMEKYYDPNNE-----KYGI-AWPINAYFISAIAQAFGGYYF--- 247
+++SE D+L E +++++D + E YG+ A Y+ ++ +GGY F
Sbjct: 157 ELISE-----DDLPETLDEWFDLSKEFREDDMYGLLALFDQIYYAQSVLGGYGGYVFGLD 211
Query: 248 DDKTEQP---GLDKPETIEGF----KFFFENIWPY-MAPTADYNTQQSIFLEGRAPIMVN 299
D P GLD IEG +F+ E ++P + N S+F EG+A +++
Sbjct: 212 DQGNYDPTDIGLDTEGAIEGAEQIQRFYGEGLFPSGIIGEQGINVLDSLFTEGKAAAVIS 271
Query: 300 GPWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWF 359
GPW++ AGI++GV LP + +G + GVK ++ + N + A +FVK F
Sbjct: 272 GPWNLEPYARAGINYGVVKLPE-LDNGLNM--SSFMGVKSYNVSSYSKNAELAEEFVK-F 327
Query: 360 TTNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGG 419
N E + +P + + DP + + Q + L P P+M VW
Sbjct: 328 IANEENSRTRYERTKEVPAVQVLAEDPVVTESDAAKAVAEQSQFSELTPNIPEMNEVWTP 387
Query: 420 VQGAIDEI 427
A+ I
Sbjct: 388 TDAALQTI 395
>pir||C70038 maltose/maltodextrin-binding protein homolog yvfK - Bacillus
subtilis >gi|1945711|emb|CAB08005.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635929|emb|CAB15421.1| (Z99121) similar to
maltose/maltodextrin-binding protein [Bacillus subtilis]
Length = 421
Score = 114 bits (282), Expect = 3e-24
Identities = 93/389 (23%), Positives = 179/389 (45%), Gaps = 34/389 (8%)
Query: 67 ETHTQEAECGSGKVVIWHNMQPNE--LQVFQSLAEEYMAMCPDVEIVFEQKPDLENA--L 122
E+ + ++ ++V+W + + + + +E+ DV++ +KP + L
Sbjct: 27 ESSSAKSSSKGSELVVWEDKEKSNGIKDAVAAFEKEH-----DVKVKVVEKPYAKQIEDL 81
Query: 123 KVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYA 182
++ PAG GPD+ D IG GLL+ + ++ D+ + + ++ Y
Sbjct: 82 RMDGPAGTGPDVLTMPGDQIGTAVTEGLLKEL--HVKKDVQSLYTDASIQSQMVDQKLYG 139
Query: 183 LPFAAETVAMIYNKKIVSEP--PKTFDELKEVMEKYYDPNNEKYG-IAWPINAYFISAIA 239
LP A ET + YNK +++E PKT +E + +K D K+G +A Y+ ++
Sbjct: 140 LPKAVETTVLFYNKDLITEKELPKTLEEWYDYSKKTAD--GSKFGFLALFDQIYYAESVM 197
Query: 240 QAFGGYYFD---DKTEQP---GLDKPETIEGF----KFFFENIWPY-MAPTADYNTQQSI 288
+GGY F D + P G++ ++G KF+ + ++P + N +S+
Sbjct: 198 SGYGGYIFGKAKDGSYNPSDIGINNEGAVKGAALIQKFYKDGLFPAGIIGEQGINVLESL 257
Query: 289 FLEGRAPIMVNGPWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHN 348
F EG+A +++GPW++ + +AGI++G+ LP +++GK + GVK +A + N
Sbjct: 258 FTEGKAAAIISGPWNVEAFSNAGINYGITKLPK-LENGKNM--SSFIGVKSYNVSAFSKN 314
Query: 349 KDAAWKFVKWFTTNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMP 408
++ A + F N + K + +P + + NDP I + + + P
Sbjct: 315 EELAQELAV-FLANEKNSKTRYEETKEVPAVKSLANDPAIMKSEAARAVTEQSRFSEPTP 373
Query: 409 KSPKMGAVWGGVQGAIDEIL---KDPKHA 434
P+M +W A+ + DPK A
Sbjct: 374 NIPEMNEIWTPADSALQTVATGKADPKQA 402
>pir||G70033 maltose/maltodextrin-binding protein homolog yvdG - Bacillus
subtilis >gi|1945666|emb|CAB08036.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635974|emb|CAB15466.1| (Z99121) similar to
maltose/maltodextrin-binding protein [Bacillus subtilis]
Length = 417
Score = 109 bits (271), Expect = 5e-23
Identities = 89/345 (25%), Positives = 152/345 (43%), Gaps = 23/345 (6%)
Query: 108 VEIVFEQKPDLENALKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFA 167
V+IV +Q + AL + PAG PD+ + A+D IG + G L I T + F
Sbjct: 65 VKIVEKQMFEQLEALPLDGPAGNAPDVMLAAYDRIGGLGQQGHLLDIKPSNT----KSFG 120
Query: 168 PMAREAIEYKGHYYALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEK----YYDPNNEK 223
+ + G Y +P ET+ + YNK ++ PKTF +L+++ E + +
Sbjct: 121 DKEMQQVTVDGKVYGMPLVIETLILYYNKDLLKTAPKTFKDLEKLTEDPRFAFASEKGKS 180
Query: 224 YGIAWPINAYFIS-AIAQAFGGYYFDDKTEQPG---LDKPETIEGFKF---FFENIWPYM 276
G +++S + +GGY F G L+ +E K+ +FE WP
Sbjct: 181 TGFLAKWTDFYMSYGLLAGYGGYVFGKNGTDSGDIGLNNKGAVEAVKYAEKWFETYWPKG 240
Query: 277 AP---TADYNTQQSIFLEGRAPIMVNGPWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRP 333
+AD QQ +FLEG+A ++ GPWS + K+A +++G AP+ P + +G+EY P
Sbjct: 241 MQDNSSADDFIQQ-MFLEGKAAAIIGGPWSAANYKEAKLNYGAAPI-PTLPNGEEY--AP 296
Query: 334 YGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPV 393
+ G K + T + A K+++ + N D +P + + + + +
Sbjct: 297 FAGGKGWVASKYTKEPELAEKWLE-YAANDANAYAFYEDTNEVPANTAARKKADEQKNEL 355
Query: 394 IYGFGQAVQHAYLMPKSPKMGAVWGGVQGAIDEILKDPKHADIEA 438
+ + A P P+M VW G + I + K A
Sbjct: 356 TSAVIKQYETATPTPNIPEMAEVWTGAESLIFDAASGKKSTQTSA 400
>gb|AAK41419.1| Maltose ABC transporter [Sulfolobus solfataricus]
Length = 523
Score = 102 bits (251), Expect = 1e-20
Identities = 102/461 (22%), Positives = 181/461 (39%), Gaps = 32/461 (6%)
Query: 1 MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTS 60
+ + + AV++V V++ ++ G +Q P T T T+ S TTT+S T++
Sbjct: 13 ISKTLVAVIIVVVIVIAI--GGVYAFLSSQHSPAAPSSTTTSFTSTTSSTTTSSVLNTSN 70
Query: 61 QTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLEN 120
+ +W++ +E Q F ++ P + + +
Sbjct: 71 PQALMQLVGISTPPSTPVTITVWNSYSTSENQAFNETLAQFEQAFPWIHVQVTYGVGVGT 130
Query: 121 A-LKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGH 179
+ + A AGQ P ++ D G AGL+ + +Y+ + + P A + E G
Sbjct: 131 SQFETAAKAGQAPIVYRDTSDSGGALFAAGLVLNLSQYLPQSITSLYVPTAIKDWELNGS 190
Query: 180 YYALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPIN---AYFIS 236
Y LP + M YNKK V PP T ++L ++ E + +GIA+ Y +
Sbjct: 191 LYGLPDNVNYIVMFYNKKFVPYPPNTTEQLVQIAES-VNKTYHVWGIAYGAGDEYGYRFA 249
Query: 237 AIAQAFGGYYFDDKTEQ--PGLDKPETIEGFKFFFENIW----PYMAP-TADYNTQQSIF 289
A FGG F + P L+ + F++ + Y+AP T + +F
Sbjct: 250 AWFAGFGGQIFTTNNGKIVPALNSTAMVNALNFWYNLTYNLKVNYLAPSTGAGGAEGQLF 309
Query: 290 LEGRAPIMVNGPWSIGSVKDA-GIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFA----- 343
+ + I+ +GPW + + A G + G APLP + + G P G + +
Sbjct: 310 VANQTAIIFDGPWDLNAYLQALGPNLGAAPLPVVSQTGLRAAPF-IGSTGFLVSSPQASG 368
Query: 344 AGTHNKDAAWKFVKWFTTNPEVIK--QLALDL--------GYIPVLSEVLNDPEIKNDPV 393
A AA FV +FT ++ ++A D+ + L E + P N +
Sbjct: 369 ATPLQIKAALLFVLYFTNYQADLRLWEVAHDIPANLQAYNEALTQLKEGMLQPTYLNQ-I 427
Query: 394 IYGFGQAVQHAYLMPKSPKMGAVWGGVQGAIDEILKDPKHA 434
+ G + Q+ P P+M W E + +A
Sbjct: 428 MEGILEQAQYGQQFPNIPQMAYYWNSFHQYASEFFANKVNA 468
>pir||S63614 malE protein homolog cymE precursor - Klebsiella oxytoca
>gi|854232|emb|CAA60004.1| (X86014) cymE [Klebsiella
oxytoca]
Length = 409
Score = 102 bits (251), Expect = 1e-20
Identities = 74/300 (24%), Positives = 144/300 (47%), Gaps = 21/300 (7%)
Query: 139 HDWIGKFAEAGLLEPIDEYITDDLL-QKFAPMAREAIEYKGHYYALPFAAETVAMIYNKK 197
HD +G+ AG + ++ I+ + + +KF A A Y+G+ Y P + TVA+ YNK
Sbjct: 94 HDLLGRLVVAGGV--MENLISAERINKKFMSNAINASRYEGNNYGFPVSYATVALFYNKD 151
Query: 198 IVSEPPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAI-AQAFGGYYFDDK---TEQ 253
I+ PP F+EL ++ ++ + KY + W + Y+ S + +G Y F + +
Sbjct: 152 ILRLPPDKFEELIQLSAEFNNVKENKYTLLWDVQNYYESRMFLTLYGAYEFGQEGTNVKD 211
Query: 254 PGLDKPETIEGFKFFFENIWPYMAPTADYNTQQ---SIFLEGRAPIMVNGPWSIGSVKDA 310
G++ +G + D Q +F EG+ +++GPW+I ++
Sbjct: 212 LGINSELAQKGLAAMKRLKTANPSNPVDMRNPQVRRGLFSEGKVAAIIDGPWAIQGYNNS 271
Query: 311 GIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIKQLA 370
I+FGV P+P + +GK+ PR + V+L ++ + + AA F + +++ ++K+
Sbjct: 272 KINFGVVPIPTL--EGKQ--PRSFSTVRLAVVSSYSKSPKAAQLFADYLSSDEMLMKRYE 327
Query: 371 LDLGYIPV---LSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGAIDEI 427
+ PV ++++L +I + H+ MP P+MG +W + AI ++
Sbjct: 328 MTESIPPVPNLMNKILPTANEATSAII----KQGLHSDAMPSIPEMGYLWSPLANAITDM 383
>sp|P29850|MALX_STRPN MALTOSE/MALTODEXTRIN-BINDING PROTEIN PRECURSOR
>gi|479206|pir||S32569 malX protein - Streptococcus
pneumoniae >gi|153723|gb|AAA26925.1| (L08611) MalX
[Streptococcus pneumoniae]
Length = 423
Score = 99.8 bits (245), Expect = 5e-20
Identities = 102/402 (25%), Positives = 167/402 (41%), Gaps = 51/402 (12%)
Query: 66 TETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLENALKVA 125
++T + A+ GS +V EL V+ + E Y + +V +E++ ++ LK
Sbjct: 27 SKTADKPADSGSSEV--------KELTVY--VDEGYKSYIEEVAKAYEKEAGVKVTLKTG 76
Query: 126 IP------------AGQGPDLFIWAHDWIGKFAEAGLLEPI---DEYITDDLLQKFAPMA 170
+G PD+ + +D +G G L + D TDD + A
Sbjct: 77 DALGGLDKLSLDNQSGNVPDVMMAPYDRVGSLGSDGQLSEVKLSDGAKTDDTTKSLVTAA 136
Query: 171 REAIEYKGHYYALPFAAETVAMIYNKKIVSEPPKTFDELKEVME--KYY----DPNNEKY 224
G Y P E++ M YNK +V + PKTF +L+ + + KY D +
Sbjct: 137 N------GKVYGAPAVIESLVMYYNKDLVKDAPKTFADLENLAKDSKYAFAGEDGKTTAF 190
Query: 225 GIAWPINAYFISAIAQAFGGYYFDDKTEQP---GLDKPETIEGFKF---FFENIWPYMAP 278
W N Y+ + G Y F + GL +I G + ++E WP
Sbjct: 191 LADWT-NFYYTYGLLAGNGAYVFGQNGKDAKDIGLANDGSIAGINYAKSWYEK-WPKGMQ 248
Query: 279 TADY--NTQQSIFLEGRAPIMVNGPWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGG 336
+ N Q+ F EG+ +++GPW + KDA +++GVA + P + +GKEY +GG
Sbjct: 249 DTEGAGNLIQTQFQEGKTAAIIDGPWKAQAFKDAKVNYGVATI-PTLPNGKEY--AAFGG 305
Query: 337 VKLIYFAAGTHNKDAAWKFVKWFTTNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYG 396
K N +A+ KFV F E K L IP +E + E KND +
Sbjct: 306 GKAWVIPQAVKNLEASQKFVD-FLVATEQQKVLYDKTNEIPANTEARSYAEGKNDELTTA 364
Query: 397 FGQAVQHAYLMPKSPKMGAVWGGVQGAIDEILKDPKHADIEA 438
+ ++ +P +M AVW + + + + K A A
Sbjct: 365 VIKQFKNTQPLPNISQMSAVWDPAKNMLFDAVSGQKDAKTAA 406
>pir||E72292 glycerol-3-phosphate ABC transporter, periplasmic
glycerol-3-phosphate-binding protein - Thermotoga
maritima (strain MSB8)
>gi|4981666|gb|AAD36196.1|AE001770_8 (AE001770)
glycerol-3-phosphate ABC transporter, periplasmic
glycerol-3-phosphate-binding protein [Thermotoga
maritima]
Length = 436
Score = 99.1 bits (243), Expect = 9e-20
Identities = 85/339 (25%), Positives = 148/339 (43%), Gaps = 40/339 (11%)
Query: 79 KVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLENALKVAIPAGQG--PDLFI 136
K+ WH M +++ Q++AE++M PD+E+ + + L + A QG P +
Sbjct: 21 KIQFWHAMGGWRIELLQNMAEDFMKTHPDIEVEVQYTGSYRDTLNKLVAAVQGGTPPHVV 80
Query: 137 WAHDWIGKF-AEAGLLEPIDEYITDDL---LQKFAPMAREAIEYKGHYYALPFAAETVAM 192
++ +F ++G+ PI + I D + KF P + KG Y++PF + +
Sbjct: 81 QIYEIGTQFMIDSGIAVPIGDLIEKDPSFDVGKFLPQVLDYYRVKGKLYSMPFNSSNPIL 140
Query: 193 IYNKKIVSE-------PPKTFDEL----KEVMEKYYDPNNEKYGIAWPINAYFISAIAQA 241
YNK + E PP+TF+EL K++ K N + GI WP++++F
Sbjct: 141 YYNKTLFKEVGLDPNKPPRTFNELIEYCKKLTVKDEKGNIVRAGITWPLHSWFFEQFVAL 200
Query: 242 FGGYYFDDKTEQPGLDKPETI--EGFKFFFENIWPYMAPTA--------DYNTQQSIFLE 291
D++ + G EG F + +W + D+ + +F+
Sbjct: 201 QNAPLVDNENGRAGRATKAVFNHEGALRFLK-LWDTLTKEGLMINTTKEDWTGARQLFIS 259
Query: 292 GRAPIMVNGPWSIGSVKDA----GIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTH 347
+ ++++ + + DA G + G A LP +G E P GG L + G H
Sbjct: 260 QKVAMLISSTSDVKLMMDAAKENGFELGTAFLPK--PEGVELGGTPIGGGSL--WIIGGH 315
Query: 348 NKD---AAWKFVKWFTTNPEVIKQLALDLGYIPVLSEVL 383
++ AAW+FVKW PE + L GY PV + +
Sbjct: 316 PEEEIKAAWEFVKWM-AEPEQQIRWHLGTGYFPVRKDAV 353
>sp|O58969|YC14_PYRHO HYPOTHETICAL ABC TRANSPORTER EXTRACELLULAR BINDING PROTEIN PH1214
PRECURSOR >gi|7520995|pir||H71064 probable cytoplasmic
protein - Pyrococcus horikoshii
>gi|3257631|dbj|BAA30314.1| (AP000005) 441aa long
hypothetical cytoplasmic protein [Pyrococcus horikoshii]
Length = 441
Score = 92.8 bits (227), Expect = 7e-18
Identities = 84/349 (24%), Positives = 150/349 (42%), Gaps = 62/349 (17%)
Query: 2 KRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTSQ 61
++ + ++LLVG L+ SVVASGCIGG SQ
Sbjct: 3 RKYLLSLLLVGALVISVVASGCIGG---------------------------------SQ 29
Query: 62 TPTETETHTQEAECGSGKVVIWHNMQPN-ELQVFQSLAEEYMAMCPDVEIVFEQKP---- 116
TPT + T TQ+ + ++ I+H E + F +LA+++ P+++I
Sbjct: 30 TPTSSPTKTQQVQ----ELEIYHWWTAGGEKEAFDALAKKFEKKYPNIKIKANPVSGGGG 85
Query: 117 -DLENALKVAIPAGQGPDLF-IWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAI 174
+L+ L+ + AG+ PD F + A + ++ +A L PID+ T+D+ + + + ++ +
Sbjct: 86 VNLKMVLQSLMLAGKPPDTFQVHAGYEMARYIKANQLTPIDDIWTEDMKKNYPKVIQQMV 145
Query: 175 EYKGHYYALPFAAETVAMI-YNKKIVSE------PPKTFDELKEVMEKYYDPNNEKYGIA 227
+ HYYA+P +I YNK+I + KT D+L V EK + + +
Sbjct: 146 IFNNHYYAVPINVHRANVIWYNKQIFKKYGIDPSSIKTIDDLFAVAEKLKENGVTPFALG 205
Query: 228 ----WPINAYFISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFFENIWPYMAP---TA 280
WP F + G Y++ T++ +F Y P
Sbjct: 206 DRNKWPATQVFEVMLVAVGGVDYYEKFINGEISANDPTLKKVLEYFVKYVEYSNPDHAAK 265
Query: 281 DYNTQQSIFLEGRAPIMVNGPWSIGSVKDAG----IDFGVAPLPPIIKD 325
++ ++ +G A + + G W+ G K G +D+G P+P + D
Sbjct: 266 TWDEACALVYKGEAAMTLMGDWANGYFKAKGWKPNVDYGAIPIPAGVYD 314
>gb|AAA26922.1| (J01796) phosphorylase [Streptococcus pneumoniae]
Length = 401
Score = 92.1 bits (225), Expect = 1e-17
Identities = 97/379 (25%), Positives = 158/379 (41%), Gaps = 51/379 (13%)
Query: 66 TETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLENALKVA 125
++T + A+ GS +V EL V+ + E Y + +V +E++ ++ LK
Sbjct: 27 SKTADKPADSGSSEV--------KELTVY--VDEGYKSYIEEVAKAYEKEAGVKVTLKTG 76
Query: 126 IP------------AGQGPDLFIWAHDWIGKFAEAGLLEPI---DEYITDDLLQKFAPMA 170
+G PD+ + +D +G G L + D TDD + A
Sbjct: 77 DALGGLDKLSLDNQSGNVPDVMMAPYDRVGSLGSDGQLSEVKLSDGAKTDDTTKSLVTAA 136
Query: 171 REAIEYKGHYYALPFAAETVAMIYNKKIVSEPPKTFDELKEVME--KYY----DPNNEKY 224
G Y P E++ M YNK +V + PKTF +L+ + + KY D +
Sbjct: 137 N------GKVYGAPAVIESLVMYYNKDLVKDAPKTFADLENLAKDSKYAFAGEDGKTTAF 190
Query: 225 GIAWPINAYFISAIAQAFGGYYFDDKTEQP---GLDKPETIEGFKF---FFENIWPYMAP 278
W N Y+ + G Y F + GL +I G + ++E WP
Sbjct: 191 LADWT-NFYYTYGLLAGNGAYVFGQNGKDAKDIGLANDGSIAGINYAKSWYEK-WPKGMQ 248
Query: 279 TADY--NTQQSIFLEGRAPIMVNGPWSIGSVKDAGIDFGVAPLPPIIKDGKEYWPRPYGG 336
+ N Q+ F EG+ +++GPW + KDA +++GVA + P + +GKEY +GG
Sbjct: 249 DTEGAGNLIQTQFQEGKTAAIIDGPWKAQAFKDAKVNYGVATI-PTLPNGKEY--AAFGG 305
Query: 337 VKLIYFAAGTHNKDAAWKFVKWFTTNPEVIKQLALDLGYIPVLSEVLNDPEIKNDPVIYG 396
K N +A+ KFV F E K L IP +E + E KND +
Sbjct: 306 GKAWVIPQAVKNLEASQKFVD-FLVATEQQKVLYDKTNEIPANTEARSYAEGKNDELTTA 364
Query: 397 FGQAVQHAYLMPKSPKMGA 415
+ ++ +P +M A
Sbjct: 365 VIKQFKNTQPLPNISQMSA 383
>emb|CAA68972.1| (Y07706) putative maltose-binding pootein [Streptomyces coelicolor]
>gi|7799256|emb|CAB90879.1| (AL355752) putative
maltose-binding protein [Streptomyces coelicolor A3(2)]
Length = 423
Score = 91.7 bits (224), Expect = 2e-17
Identities = 94/367 (25%), Positives = 156/367 (41%), Gaps = 29/367 (7%)
Query: 89 NELQVFQSLAEEYMAMCPDVEIVFEQKP--DLENALKVAIPAGQGPDLFIWAHDWIGKFA 146
NE +++L +E+ A V++ F P +N A + PD+ W FA
Sbjct: 47 NEAPTYKALVKEFEAANKGVKVNFVNVPFDQAQNKFDTAAGSKGAPDVLRSEVGWTPAFA 106
Query: 147 EAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKKIVS----EP 202
+ G P+D KF P E +Y+G Y +P +T+A +YNK++ E
Sbjct: 107 KKGFFLPLDGTEALAEQDKFQPNLIEQAKYEGKTYGVPLVTDTLAFVYNKELFEKAGVEA 166
Query: 203 PKTFDELKEVMEKYYDPNNEKYGI--AWPINA-YFISAIAQAFGGYYFDDKTEQPGLDKP 259
PKT+D+LK+ D K G+ W A Y+ G D ++ ++
Sbjct: 167 PKTWDDLKKAAATVKD----KTGVDGYWASTAGYYAQPFLYGEGTDTVDADAKKVTVNAA 222
Query: 260 ETIEGFKFF---FENIWPYMA-PTAD-YNTQQSIFLEGRAPIMVNGPWSI-----GSVKD 309
+G+ + F+ + A TAD Y Q F+ G+ ++ GPW I G+
Sbjct: 223 AAKKGYGTWLSLFDGKGLHKADTTADAYAHIQEAFVSGKVASIIQGPWEITNFYKGTAFK 282
Query: 310 AGIDFGVAPLPPIIKDGKEYWPRPYGGVKL-IYFAAGTHNKDAAWKFVKWFTTNPEVIKQ 368
+ G+A + P GK P GG L +Y + +++AA KFV F T+ + +
Sbjct: 283 DKNNLGIATV-PAGSTGKA--GAPTGGHNLSVYAGSDKAHQEAALKFVN-FMTSAKSQET 338
Query: 369 LALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYLMPKSPKMGAVWGGVQGAIDEIL 428
+AL +P + ++K DP I GF + A P P+ ++W + + +I
Sbjct: 339 VALKNSTLPTRDDAYT-AKVKADPGIAGFQTVLPAAQPRPALPEYSSLWTPLDDELPQIA 397
Query: 429 KDPKHAD 435
K D
Sbjct: 398 GGKKSLD 404
>dbj|BAB04963.1| (AP001511) unknown conserved protein in others [Bacillus
halodurans]
Length = 440
Score = 87.0 bits (212), Expect = 4e-16
Identities = 95/402 (23%), Positives = 169/402 (41%), Gaps = 36/402 (8%)
Query: 53 TSPTQTTSQTPTETETHTQEAECGSGKVV-IWHNMQPNELQVFQSLAEEYMAMCPDVEIV 111
+ PT ++ PTE T+E +VV I + ++ + L E +M P++++
Sbjct: 27 SDPTDEPAE-PTEPGDETEEEATADDEVVTITYARGYDQTGGNEKLIEAFMEKHPNIKVE 85
Query: 112 FEQKP---DLENALKVAIPAGQGPDLFIWAHD--WIGKFAEAGLLEPIDEYITDDLLQ-- 164
F++ P +++ V + Q ++ ++ D W +FA+A +D +I D +
Sbjct: 86 FQEMPADTGAQHSAYVTAFSAQSSEIDVFDVDVIWPAEFAQANYALELDRFIERDGIDMN 145
Query: 165 KFAPMAREAIEYKGHYYALPFAAETVAMIYNKKIVSEPPKTFDELKEVMEKYYDPNNEKY 224
++ P +A G YA+P + + Y IV PP T+DEL E+ E K+
Sbjct: 146 QYFPGTVQAGNVGGIQYAMPKFTDAGLLYYRSDIVETPPSTWDELLEMAEDLQGEEGTKF 205
Query: 225 GIAWPINAY-----FISAIAQAFGGYYFDDKTEQPGLDKPETIEGFKFFFENIWPYMAPT 279
G Y + A+GG D+ E ++ PE I+G + E + + P+
Sbjct: 206 GYLMQAAQYEGMVVNATEFIAAYGGAVIDENGEVV-INSPEAIKGLEKMKEIVQSDVVPS 264
Query: 280 ADYNTQQ----SIFLEGRAPIMVNGPWSIG------SVKDAGIDFGVAPLPPIIKDGKEY 329
N + + F++G A N P+ S ++F + P G
Sbjct: 265 DITNFMETETANSFIQGNAVFARNWPYMQALSDGDESNVSGNVEFSLLPA------GDAG 318
Query: 330 WPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIKQLALDLGYIPVLSEVLNDPEIK 389
GG ++ + N DAAW+ VK F T PE K A+ G P + + +D E+
Sbjct: 319 NAAGLGG-WMVMINRYSENVDAAWELVK-FMTGPEGQKITAIHGGNAPTIEALYSDDEVL 376
Query: 390 NDPVIYG---FGQAVQHAYLMPKSPKMGAVWGGVQGAIDEIL 428
++ F + +Q+A P SP + +Q I ++L
Sbjct: 377 EASPLFANEEFVETLQNAVPRPVSPIYPEISDIMQVEISKLL 418
>dbj|BAB07409.1| (AP001519) sugar transport system (sugar-binding protein) [Bacillus
halodurans]
Length = 420
Score = 85.0 bits (207), Expect = 2e-15
Identities = 80/323 (24%), Positives = 141/323 (42%), Gaps = 26/323 (8%)
Query: 88 PNELQVFQSLAEEYMAMCPDVEIVFEQKPD-LENALKVAIPAGQGPDLFIWAHDWIGKFA 146
P E + F+ + PD+++ PD + L+ + G+GPD+F
Sbjct: 55 PTEQRYFEETVATFEEQNPDIKVNINTIPDQYMDVLRTRLIGGEGPDVFFLDAFEAPGLI 114
Query: 147 EAGLLEPIDEYITDDL-LQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKKIVSE---- 201
E G +EP+DEYITD+ L F EA E G Y LP T+A+ YN ++ E
Sbjct: 115 ETGAVEPLDEYITDEFDLADFEQPLLEAFERNGVLYGLPKDTSTLALFYNIDMLEEAGFD 174
Query: 202 -PPKTFDELKEVMEKYYDPNNEKYGIAWPINAYFISAIAQAFGGYYFDDKTEQPGLDKPE 260
PP+T++EL+E+ N+++YG + + IAQ+ GG D Q P
Sbjct: 175 GPPETWEELEEMAIAL--TNDDEYGFGVVTDLARLMFIAQSNGGQIATD--NQATFADPR 230
Query: 261 TIEGFKFFFE--NIWPYMAPTADYNTQ--QSIFLEGRAPIMVNGPWSIGSVKD--AGIDF 314
+E + + N+ ++ +F R +++ G W++ + + +++
Sbjct: 231 VVEALQPIVDMRNVDGSAVEPSEVGADWGGEMFGLERVAMVIEGNWTVPFLDENFEDVNY 290
Query: 315 GVAPLPPII-KDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEVIKQLALDL 373
GVA +P I +G + Y + +K+ AW+ ++ F T E ++
Sbjct: 291 GVAEVPTINGNEGTMAYTVSY------VMNRNSEHKEEAWRLIE-FLTGKEGMELWTSSG 343
Query: 374 GYIPVLSEVLNDPEIKNDPVIYG 396
+P + V + +DP IYG
Sbjct: 344 LTLPTRASVSEKLDYADDP-IYG 365
>pir||T47065 hypothetical protein [imported] - Yersinia pestis
>gi|4106653|emb|CAA21408.1| (AL031866) ORF83, len=422
aa, propable sugar ABC transporter binding protein,
similar to AF039956_5 Sinorhizobium fredii, (419 aa),
26.7% identity in 419 aa overlap, Fasta scores: opt:
531, E(): 1.3e-25 [Yersinia pestis]
Length = 422
Score = 79.6 bits (193), Expect = 7e-14
Identities = 62/259 (23%), Positives = 113/259 (42%), Gaps = 31/259 (11%)
Query: 140 DWIGK--FAEAGLLEPIDEYITDDLL----QKFAPMAREAIEYKGHYYALPFAAETVAMI 193
DW+ +A AG + P+D+++ D F + + YK YY LP E+ ++
Sbjct: 86 DWVHAVGYASAGYITPVDQWMESDTAFYDGADFVKSYADTLRYKDGYYGLPVYGESTFLM 145
Query: 194 YNKKIVSE----PPKTFDELKEVMEKYYDPNNEKY------GIAWPINAYFISAIAQAFG 243
Y K + + PKTFDEL + + K G N + ++ +G
Sbjct: 146 YRKDLFEQYGIAVPKTFDELTAAAKTIKEKTEGKVAGITLRGAQGIQNTFAWASFLWGYG 205
Query: 244 GYYFDDKTEQPGLDKPETIEGFKFF---FENIWPYMAPTADYNTQQSIFLEGRAPIMVNG 300
G + DD + + P+ +E K F +N P A + + +F +G+A + ++
Sbjct: 206 GQWIDDNGKS-AITSPQAVEATKSFVNILKNYGPIGAANFGWQENRLVFQQGKAAMTIDS 264
Query: 301 PWSIGSVKDAGID-----FGVAPLPPIIKDGKEYWPRPYGGVKL--IYFAAGTHNKDAAW 353
+ G +D G AP+P ++ G P G +++ +Y ++ + +DAAW
Sbjct: 265 TVNGGFNEDPKESTVVGKVGYAPVP--VQPGDH--PGNSGALQVHGLYISSDSKKQDAAW 320
Query: 354 KFVKWFTTNPEVIKQLALD 372
KF+ W T +K + L+
Sbjct: 321 KFISWATDKQTQMKSVELN 339
>dbj|BAA31541.1| (AB015670) maltose/maltodextrin-binding protein precursor [Bacillus
sp.]
Length = 181
Score = 78.4 bits (190), Expect = 2e-13
Identities = 54/211 (25%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 1 MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTS 60
MK+G + L+ + + ++ + C PE+ + TT + P + T
Sbjct: 1 MKKGFSLLSLITMFLMIILLAAC-----------APEREEEAVTTDTNDGEADQPEELT- 48
Query: 61 QTPTETETHTQEAECGSGKVVIWHNMQPNELQVFQSLAEEYMAMCPDVEIVFEQKPDLEN 120
IW N + +L+ + +A +Y + + E KP ++
Sbjct: 49 ---------------------IWANDREEQLEAIEKIANDYTEQT-GINVKVETKPMMDQ 86
Query: 121 A--LKVAIPAGQGPDLFIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEY-- 176
L +A P G GPDLF HD IG GL +P+ ++DD L +A + +A+ Y
Sbjct: 87 LQELSLAGPEGNGPDLFFQPHDQIGNIVAQGLADPLT--LSDDELSNYASSSIDAVTYEF 144
Query: 177 --KGHYYALPFAAETVAMIYNKKIVSEPPKT 205
+ Y +P ET + YNK+IV E P+T
Sbjct: 145 EGETDIYGIPAVIETYGIFYNKEIVPEAPET 175
>emb|CAB71196.1| (AL138538) putative sugar-binding protein [Streptomyces coelicolor
A3(2)]
Length = 273
Score = 74.5 bits (180), Expect = 2e-12
Identities = 65/268 (24%), Positives = 110/268 (40%), Gaps = 18/268 (6%)
Query: 202 PPKTFDELKEVMEKYYDPNNEKY---GIAWPINAY--FISAIAQAFGGYYFDDKTEQPGL 256
PPKT+ E +V +K + Y G + Y + + YFD+
Sbjct: 4 PPKTWSEFAQVAKKLTKTKGDGYRQLGFMPNYHGYETVVDHYMSQWDHAYFDEDGRSAVA 63
Query: 257 DKPETIEGFKFF---------FENIWPYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSV 307
+ P E F + FE + Y D + F G+ + ++G W +G
Sbjct: 64 EDPAFAEMFTYQKKLVDDLGGFEKLEKYRNTFGDEWGAKHPFQTGQVAMQLDGEWRLGMA 123
Query: 308 KDAGIDF--GVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTTNPEV 365
KDAG+DF G AP+P + EY G ++ A + ++AAW+ VK+ TT+
Sbjct: 124 KDAGVDFEIGTAPMPVADDEAAEYGKGFLSGT-VMGIAPQSKKQNAAWELVKYMTTDTGA 182
Query: 366 IKQLALDLGYIPVLSEVLNDPEIKNDPVIYGFGQAVQHAYL-MPKSPKMGAVWGGVQGAI 424
+ A + +P L P++K DP F QH P + GA + +
Sbjct: 183 VVAFANAIRNVPSTFPALKSPDLKTDPEFKTFLDIAQHRESNSPPASVNGATYQLTLQDL 242
Query: 425 DEILKDPKHADIEAILKKYQEEILKNMQ 452
+ K D++A L+K +I ++++
Sbjct: 243 GYQYESGKVKDLKAGLEKAAAQIDRDIE 270
>gb|AAC45766.1| (AF018073) periplasmic sorbitol-binding protein; SmoE [Rhodobacter
sphaeroides]
Length = 436
Score = 72.6 bits (175), Expect = 9e-12
Identities = 75/297 (25%), Positives = 124/297 (41%), Gaps = 42/297 (14%)
Query: 95 QSLAEEYMAMCPDVEIVFEQKPDLENALK------VAIPAGQGPDLFIWAHDWIGKFAEA 148
Q L E+ A PD+ + + EN L+ +A GQ L I ++ + + +
Sbjct: 40 QGLMSEFNAQHPDITVEWVTLE--ENVLRQKVTTDIATKGGQFDVLTIGTYE-VPIWGKQ 96
Query: 149 GLLEPID----EYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKKIVSE--- 201
G L ++ EY DD+L P R + G YA PF E+ ++Y K ++ +
Sbjct: 97 GWLVSLNDLPPEYDADDIL----PAIRNGLTVDGELYAAPFYGESSMIMYRKDLMEKAGL 152
Query: 202 ---PPKTFDELKEVMEKYYDPNNEKYGI------AWPINAYFISAIAQAFGGYYFDDKTE 252
T+D +KE +K D + E YGI W N F+SA+A ++G +FD+
Sbjct: 153 TMPDAPTWDFVKEAAQKMTDKDAEVYGICLRGKAGWGENMAFLSAMANSYGARWFDENW- 211
Query: 253 QPGLDK---PETIEGFKFFFENIWPYMAPTADYNTQQSIFLEGRAPIMVNGPWSIGSVKD 309
QP D T+ + N P A +N ++F +G+ + ++ + V +
Sbjct: 212 QPQFDGEAWKATLTDYLDMMTNYGPPGASKNGFNENLALFQQGKCGMWIDATVAASFVTN 271
Query: 310 -----AGIDFGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWFTT 361
G A P K + W G + AG+ DAA +F+ W T+
Sbjct: 272 PEESTVADKVGFALAPDTGKGKRANWL----GAWNLAIPAGSQKVDAAKQFIAWATS 324
>pir||C71014 hypothetical protein PH1409 - Pyrococcus horikoshii
>gi|3257832|dbj|BAA30515.1| (AP000006) 721aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 721
Score = 71.0 bits (171), Expect = 3e-11
Identities = 40/82 (48%), Positives = 52/82 (62%), Gaps = 4/82 (4%)
Query: 1 MKRGIYAVLLVGVLIFSVVASGCIGGTQTQTETQTPEKTQTPTTTQPSPTTTTSPTQTTS 60
M R + ++LLVGVL+ +ASGCIGG T+TQ+P +TQ+PT TQ SPT T SPTQT S
Sbjct: 1 MNRALLSLLLVGVLVLGTMASGCIGG---GTQTQSPTQTQSPTQTQ-SPTQTGSPTQTQS 56
Query: 61 QTPTETETHTQEAECGSGKVVI 82
T T+ +A KV +
Sbjct: 57 PTQTQAPQGVTKAILELDKVTV 78
>pir||H83352 probable binding protein component of ABC maltose/mannitol
transporter PA2338 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9948374|gb|AAG05726.1|AE004660_2
(AE004660) probable binding protein component of ABC
maltose/mannitol transporter [Pseudomonas aeruginosa]
Length = 436
Score = 71.0 bits (171), Expect = 3e-11
Identities = 77/302 (25%), Positives = 117/302 (38%), Gaps = 40/302 (13%)
Query: 89 NELQVFQSLAEEYMAMCPDVE---IVFEQKPDLENALK------VAIPAGQGPDLFIWAH 139
N++ Q L++ + PD+ +V E EN L+ +A GQ L I +
Sbjct: 34 NDMIRMQRLSKVFEESHPDIALKWVVLE-----ENVLRQRLTTDIATQGGQFDLLTIGMY 88
Query: 140 DWIGKFAEAGLLEPIDEYITDDLLQKFAPMAREAIEYKGHYYALPFAAETVAMIYNKKIV 199
+ + G LEP+ D L P R+ + KG YALPF AE Y K +
Sbjct: 89 E-AALWGAKGWLEPMSGLPADYALDDLLPSVRDGLSVKGTLYALPFYAEASITYYRKDLF 147
Query: 200 SE------PPKTFDELKEVMEKYYDPNNEKYGI------AWPINAYFISAIAQAFGGYYF 247
+ T+ +L E + P+ +YGI W N I +A AFG +F
Sbjct: 148 QQAGLRMPEQPTWTQLGEFAARLNRPDQGQYGICLRGKAGWGENMALIGTLANAFGARWF 207
Query: 248 DDKTEQPGLDKPETIEGFKFFFENIWPYMAPTAD---YNTQQSIFLEGRAPIMVNGPWSI 304
D++ QP E + F+ + Y P A +N ++F G+ I V+ +
Sbjct: 208 DERW-QPEFSGGEWKKALDFYVSTLKRYGPPGASSNGFNENLALFNSGKCAIWVDASVAG 266
Query: 305 GSVKDAGID-----FGVAPLPPIIKDGKEYWPRPYGGVKLIYFAAGTHNKDAAWKFVKWF 359
V D G A P + D W + + A + KDAA F W
Sbjct: 267 SFVTDKSQSKVADATGFAFAPREVTDKGASWLYSWA----LAIPASSRAKDAAKAFATWA 322
Query: 360 TT 361
T+
Sbjct: 323 TS 324
>pir||S18119 malE protein homolog - Alicyclobacillus acidocaldarius (fragment)
>gi|39302|emb|CAA44639.1| (X62835) malE
protein-homologue [Alicyclobacillus acidocaldarius]
Length = 180
Score = 69.5 bits (167), Expect = 8e-11
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 52 TTSPTQTTSQTPTETETHTQEAECGSGKVV-IWHNMQPNELQVFQSLAEEYMAMCPDVEI 110
T++ Q TS + + + + + G+ + +W ELQ + +A ++ D I
Sbjct: 23 TSNGGQNTSPSTSSSSAKGEASALPKGETITVWSWQTGPELQDVKQIAAQWAKAHGDKVI 82
Query: 111 VFEQKPDLENALKVAIPA--GQGPDL-FIWAHDWIGKFAEAGLLEPIDEYITDDLLQKFA 167
V +Q + + A A G+GPD+ F HD G FAE GL+ P+ + + L +A
Sbjct: 83 VVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPVPSGVLNTGL--YA 140
Query: 168 PMAREAIEYKGHYYALPFAAETVAMIYNKKIVSEPPKTF 206
P +AI+ G Y++P + + A+ YNKK+V +PP+T+
Sbjct: 141 PNTIDAIKVNGTMYSVPVSVQVAAIYYNKKLVPQPPQTW 179
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.317 0.136 0.417
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189679305
Number of Sequences: 2977
Number of extensions: 8831071
Number of successful extensions: 72715
Number of sequences better than 1.0e-10: 44
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 72535
Number of HSP's gapped (non-prelim): 48
length of query: 453
length of database: 189,106,746
effective HSP length: 54
effective length of query: 399
effective length of database: 156,788,448
effective search space: 62558590752
effective search space used: 62558590752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.6 bits)
S2: 167 (69.5 bits)