BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0120 (malC) DE:MALTODEXTRIN TRANSPORT SYSTEM PERMEASE
PROTEIN
(302 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G75206 maltodextrin transport system permease protein PAB01... 615 e-175
dbj|BAB18103.1| (AB034969) cyclomaltodextrin transport membrane ... 369 e-101
emb|CAB65652.1| (AJ252161) putative maltose transport membrane p... 160 2e-38
dbj|BAB06644.1| (AP001517) maltose/maltodextrin transport system... 158 7e-38
pir||A72283 maltose ABC transporter, permease protein - Thermoto... 157 1e-37
emb|CAC11274.1| (AL445063) inner membrane protein of trehalose/m... 157 2e-37
dbj|BAB05739.1| (AP001514) maltose/maltodextrin transport system... 153 3e-36
sp|Q04698|MALC_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROT... 152 7e-36
emb|CAB90878.1| (AL355752) putative maltose permease [Streptomyc... 151 1e-35
gb|AAK41418.1| Sugar transport protein, hypothetical [Sulfolobus... 149 3e-35
emb|CAB08006.1| (Z94043) hypothetical protein [Bacillus subtilis] 149 5e-35
pir||D70038 maltodextrin transport system permease homolog yvfL ... 149 5e-35
pir||H70033 maltodextrin transport system permease homolog yvdH ... 148 6e-35
pir||H75503 maltose ABC transporter, permease protein - Deinococ... 148 6e-35
gb|AAG09707.1|AF218837_2 (AF218837) unknown [Pasteurella multocida] 146 3e-34
emb|CAB61807.1| (AL133236) putative integral membrane transport ... 146 4e-34
gb|AAC44394.1| (U43526) ORF-3 [Streptococcus pneumoniae] 144 1e-33
emb|CAA68973.1| (Y07706) putative maltose permease [Streptomyces... 143 3e-33
pir||D82557 ABC transporter sugar permease XF2447 [imported] - X... 142 6e-33
sp|P02916|MALF_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 139 3e-32
pir||T46751 inner membrane protein malF [validated] - Thermococc... 139 3e-32
sp|P18812|MALF_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 139 4e-32
sp|P26467|MALF_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 139 4e-32
pir||G75395 ABC transporter, permease protein, MalFG family - De... 139 5e-32
dbj|BAB04796.1| (AP001510) glycerol-3-phosphate ABC transporter ... 136 4e-31
gb|AAF70321.1|AF260245_1 (AF260245) MalF [Vibrio cholerae] 134 1e-30
pir||G82397 maltose ABC transporter, permease protein VCA0944 [i... 134 1e-30
pir||T36087 probable binding protein dependent transport protein... 132 4e-30
dbj|BAB07408.1| (AP001519) sugar transport system (permease) [Ba... 130 2e-29
dbj|BAB05584.1| (AP001513) sugar transport system (permease) (bi... 130 3e-29
pir||D72395 sugar ABC transporter, permease protein - Thermotoga... 129 3e-29
emb|CAB59596.1| (AL132662) probable sugar transporter inner memb... 129 6e-29
emb|CAB95283.1| (AL359779) putative sugar transport integral mem... 128 7e-29
emb|CAB11326.1| (Z98604) possible sugar transport protein [Mycob... 127 2e-28
pir||F72292 glycerol-3-phosphate ABC transporter, permease prote... 126 4e-28
dbj|BAA28360.1| (D85027) integral membrane protein [Thermus sp. A4] 125 5e-28
pir||G70943 hypothetical protein Rv2040c - Mycobacterium tubercu... 125 6e-28
gb|AAD33665.1|AF135398_2 (AF135398) putative integral membrane p... 123 2e-27
gb|AAD51828.1|AF175299_3 (AF175299) ThuF [Sinorhizobium meliloti] 123 2e-27
emb|CAB94618.1| (AL359214) putative sugar transporter integral m... 123 2e-27
pir||B71369 probable sugar ABC transporter, permease protein (y4... 123 3e-27
sp|O58968|YC15_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 122 6e-27
pir||T35790 probable transmembrane sugar transport protein - Str... 120 2e-26
pir||G72379 sugar ABC transporter, permease protein - Thermotoga... 120 2e-26
sp|Q9Z3R6|AGLF_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE ... 119 5e-26
emb|CAB95276.1| (AL359779) putative sugar transport integral mem... 119 5e-26
emb|CAC10105.1| (AL442165) putative cellobiose transport permeas... 119 5e-26
emb|CAB55533.1| (AL117322) putative binding-protein-dependent tr... 118 6e-26
emb|CAB71197.1| (AL138538) putative sugar transport system perme... 118 6e-26
dbj|BAB05644.1| (AP001513) sugar transport system (permease) [Ba... 118 6e-26
emb|CAA91221.1| (Z56279) integral membrane protein [Thermoanaero... 117 2e-25
emb|CAB72191.1| (AL138851) putative sugar transporter inner memb... 116 2e-25
dbj|BAB06444.1| (AP001516) lactose transport system (permease) [... 115 5e-25
sp|O31519|YESP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 115 7e-25
emb|CAB86098.1| (AL163003) putative sugar transporter inner memb... 115 9e-25
pir||S63615 malF protein homolog cymF - Klebsiella oxytoca >gi|8... 114 2e-24
sp|P77653|YCJO_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 113 2e-24
dbj|BAB04964.1| (AP001511) unknown conserved protein in others [... 113 3e-24
pir||T46603 permease cebF [imported] - Streptomyces reticuli >gi... 112 6e-24
emb|CAB88145.1| (AL352956) putative binding protein dependent tr... 112 6e-24
emb|CAC16436.1| (AL450165) putative sugar transport permease [St... 111 1e-23
pir||S77536 lactose transport system permease protein lacF - Syn... 109 4e-23
pir||D72331 sugar ABC transporter, permease protein - Thermotoga... 109 5e-23
sp|P29823|LACF_AGRRD LACTOSE TRANSPORT SYSTEM PERMEASE PROTEIN L... 109 5e-23
pir||T47064 hypothetical protein [imported] - Yersinia pestis >g... 108 9e-23
dbj|BAB07400.1| (AP001519) sugar ABC transporter (permease) [Bac... 108 9e-23
sp|P37730|AMYD_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANS... 107 2e-22
pir||E70703 probable uspA protein - Mycobacterium tuberculosis (... 107 2e-22
emb|CAB76329.1| (AL158061) putative binding-protein dependent tr... 107 2e-22
pir||T45202 probable transport protein malf [imported] - Mycobac... 106 3e-22
pir||C70952 probable sugA protein - Mycobacterium tuberculosis (... 106 5e-22
emb|CAB70940.1| (AL137778) putative transport system inner membr... 106 5e-22
pir||F70693 probable ugpA protein - Mycobacterium tuberculosis (... 104 1e-21
sp|O32155|YURN_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 104 1e-21
pir||T36901 probable integral membrane transport protein - Strep... 102 4e-21
emb|CAB55715.1| (AL117387) putative binding protein dependent tr... 102 4e-21
pir||S75971 hypothetical protein - Synechocystis sp. (strain PCC... 101 9e-21
pir||F75187 probable sugar abc transporter, permease protein PAB... 101 1e-20
sp|O58759|YA38_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 101 2e-20
emb|CAB61917.1| (AL133278) putative transport system permease pr... 100 2e-20
pir||T36913 probable integral membrane sugar transport protein -... 100 4e-20
dbj|BAB04837.1| (AP001511) lactose transport system (permease) [... 100 4e-20
emb|CAB59589.1| (AL132662) putative sugar transporter inner memb... 98 1e-19
sp|P55602|Y4OQ_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 98 1e-19
pir||E71220 probable sugar transport membrane protein - Pyrococc... 98 1e-19
pir||G72203 sugar ABC transporter, permease protein - Thermotoga... 98 2e-19
pir||E72357 sugar ABC transporter, permease protein - Thermotoga... 97 3e-19
gb|AAG20919.1| (AE005158) sn-glycerol-3-phosphate transport syst... 96 5e-19
emb|CAB51940.1| (AJ132472) Putative ABC-type Sugar Transporter [... 96 7e-19
pir||C72378 sugar ABC transporter, permease protein - Thermotoga... 95 9e-19
pir||C75208 sugar transport system permease protein PAB2230 - Py... 92 6e-18
emb|CAB72405.1| (AL138978) putative integral membrane transport ... 92 6e-18
gb|AAF37728.1| (AF086819) cellobiose transport permease BglA [Th... 92 6e-18
emb|CAC01655.1| (AL391072) putative sugar-transporter integral m... 92 6e-18
sp|P10905|UGPA_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT SYSTEM PE... 92 8e-18
dbj|BAA14894.1| (D90770) Sn-glycerol-3-phosphate transport syste... 92 1e-17
gb|AAC04469.1| (AF007800) MtlF [Pseudomonas fluorescens] 92 1e-17
pir||B69588 L-arabinose transport (integral membrane protein) ar... 91 1e-17
emb|CAA61935.1| (X89810) putative integral membrane protein [Bac... 91 1e-17
pir||A72756 probable multiple sugar-binding transport system per... 91 1e-17
dbj|BAB04621.1| (AP001510) L-arabinose transport system (permeas... 91 1e-17
pir||C71243 hypothetical protein PH0205 - Pyrococcus horikoshii ... 90 3e-17
pir||T37228 probable sugar transport system permease protein - S... 90 3e-17
pir||T03552 maltose transport inner membrane protein - Rhodobact... 90 4e-17
pir||T30266 suger transport protein protein - Streptomyces livid... 89 5e-17
gb|AAK43167.1| Arabinose ABC transporter, permease [Sulfolobus s... 89 9e-17
emb|CAC11828.1| (AL445065) probable sugar ABC transporter, perme... 89 9e-17
pir||C72279 sugar ABC transporter, permease protein - Thermotoga... 88 1e-16
pir||T35671 probable transmembrane transport protein - Streptomy... 88 2e-16
pir||A83353 probable binding-protein-dependent maltose/mannitol ... 86 4e-16
dbj|BAB04513.1| (AP001509) sugar transport system (permease) (bi... 86 4e-16
pir||T37130 probable transport system integral membrane protein ... 85 1e-15
dbj|BAB07565.1| (AP001520) ABC transporter (permease) [Bacillus ... 85 1e-15
emb|CAB61178.1| (AL132973) putative binding protein dependent tr... 83 3e-15
pir||C71123 probable sugar transport system permease protein - P... 83 4e-15
pir||G83248 probable permease of ABC sugar transporter PA3189 [i... 83 4e-15
gb|AAC45767.1| (AF018073) sorbitol/mannitol transport inner memb... 82 9e-15
gi|10954681 probable mikimopine transporter gene~similar to motC... 82 9e-15
gb|AAK41271.1| Maltose transport inner membrane protein [Sulfolo... 80 4e-14
sp|Q00750|MSMF_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PER... 80 4e-14
emb|CAB91123.1| (AL355913) putative transport system integral me... 79 6e-14
pir||D72543 probable sugar transport system permease protein APE... 78 1e-13
gb|AAK42958.1| ABC transporter, permease (glucose) [Sulfolobus s... 78 1e-13
dbj|BAB05944.1| (AP001514) sugar transport system (permease) [Ba... 78 2e-13
gb|AAC98811.1| (U75905) putative ABC-type sugar transporter [Pse... 77 2e-13
pir||T36479 probable binding protein dependent transport protein... 76 5e-13
emb|CAB56684.1| (AL121596) binding-protein dependent transport p... 76 5e-13
emb|CAC11292.1| (AL445063) trehalose/maltose transporter, inner ... 76 7e-13
pir||E69585 sugar transport amyD - Bacillus subtilis >gi|2293307... 73 3e-12
emb|CAB88162.1| (AL352956) possible binding-protein-dependent tr... 72 7e-12
pir||A72451 probable lactose transport system permease protein A... 72 1e-11
gb|AAC99626.1| (AF043654) BxlF [Streptomyces lividans] 69 5e-11
gb|AAC98126.1| (AF098273) integral membrane protein [Bacillus st... 69 8e-11
>pir||G75206 maltodextrin transport system permease protein PAB0120 - Pyrococcus
abyssi (strain Orsay) >gi|5457611|emb|CAB49102.1|
(AJ248283) MALTODEXTRIN TRANSPORT SYSTEM PERMEASE
PROTEIN [Pyrococcus abyssi]
Length = 302
Score = 615 bits (1568), Expect = e-175
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MGEDEMKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVG 60
MGEDEMKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVG
Sbjct: 1 MGEDEMKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVG 60
Query: 61 LENFKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIP 120
LENFKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIP
Sbjct: 61 LENFKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIP 120
Query: 121 WALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPF 180
WALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPF
Sbjct: 121 WALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPF 180
Query: 181 MMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMV 240
MMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMV
Sbjct: 181 MMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMV 240
Query: 241 PYLYNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGA 300
PYLYNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGA
Sbjct: 241 PYLYNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGA 300
Query: 301 KE 302
KE
Sbjct: 301 KE 302
>dbj|BAB18103.1| (AB034969) cyclomaltodextrin transport membrane protein
[Thermococcus sp. B1001]
Length = 231
Score = 369 bits (937), Expect = e-101
Identities = 176/231 (76%), Positives = 203/231 (87%), Gaps = 2/231 (0%)
Query: 6 MKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEK--AGTLKFVGLEN 63
M K TIAAL LILPG+ AFLFFN++PI+YSIY+AFTNA+LGNFP++ A L+FVGLEN
Sbjct: 1 MDKKTIAALALILPGMIAFLFFNIYPILYSIYIAFTNAKLGNFPIQAPTAEPLRFVGLEN 60
Query: 64 FKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWAL 123
F+W LSD KFRSAF WTW+FVATSVTLKV+VGI LS+LYN+KYV+GK YRALLIIPWAL
Sbjct: 61 FRWALSDPKFRSAFVWTWVFVATSVTLKVVVGILLSVLYNNKYVKGKFFYRALLIIPWAL 120
Query: 124 PLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMT 183
PLLFS+ VW+FMFDPV GPIN +L+ +GI+NPP+W+ W F+ALNIIEVWLAYPFMMT
Sbjct: 121 PLLFSVMVWRFMFDPVVGPINIMLRDLGITNPPDWMTSVTWGFVALNIIEVWLAYPFMMT 180
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAAS 234
VIT+ALQSVPDTLIEAAIIDGANYWQR V++P VSKPIAFATILTSAAS
Sbjct: 181 VITSALQSVPDTLIEAAIIDGANYWQRLTKVVIPIVSKPIAFATILTSAAS 231
>emb|CAB65652.1| (AJ252161) putative maltose transport membrane protein
[Alicyclobacillus acidocaldarius]
Length = 321
Score = 160 bits (401), Expect = 2e-38
Identities = 85/235 (36%), Positives = 135/235 (57%), Gaps = 12/235 (5%)
Query: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK-----F 73
P + ++ PI Y+IY++FTN +F + +FVGL+N++ +L+ F
Sbjct: 30 PALVTICVLSILPIFYTIYISFTNFNQMHFL-----SYQFVGLKNYEELLNPHDPLSNLF 84
Query: 74 RSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWK 133
F WT ++ + L LVG+ L++L N+K++R + +YR LLI+PWA+P L S+ W+
Sbjct: 85 LPTFIWTLVYALCTTALAYLVGLFLAVLLNNKHMRERTLYRTLLIVPWAVPNLISMLAWQ 144
Query: 134 FMFDPVFGPINQLLKSI-GISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSV 192
+ + +G IN LL + G+ P W+ WA +A+ ++ VW +P+MMTV ALQS+
Sbjct: 145 GLLNDQYGQINALLHGVFGLPRIP-WLTSALWARIAVIMVNVWAGFPYMMTVCLGALQSI 203
Query: 193 PDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
P EAA IDGAN+WQ FR+V +P+V + I + + +F F YL G
Sbjct: 204 PTDQYEAAEIDGANWWQVFRYVTMPSVWRISLPLLIPSFSYNFNNFNASYLLTGG 258
>dbj|BAB06644.1| (AP001517) maltose/maltodextrin transport system (permease)
[Bacillus halodurans]
Length = 430
Score = 158 bits (396), Expect = 7e-38
Identities = 89/241 (36%), Positives = 138/241 (56%), Gaps = 14/241 (5%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILS----D 70
+LI PG+ +F ++P+++ + LAFTN L N P L +VG +NF +++
Sbjct: 133 MLIGPGLIFLIFTVVFPLLFMLGLAFTNYNLYNAPPRNL--LDWVGFDNFVQLVTVPIWR 190
Query: 71 EKFRSAFKWT--WIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFS 128
E F S F WT W FVATS ++ +G+ L+++ N ++ K R +LI+PWA+P +
Sbjct: 191 ETFFSVFSWTLIWTFVATSC--QIALGLFLAMMVNDPRIKFKKFIRTILILPWAVPAFVT 248
Query: 129 ITVWKFMFDPVFGPINQ--LLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVIT 186
I ++ MF+ FG IN+ L+ G P W+ DPFW+ AL +I+ WL +PF+ + T
Sbjct: 249 ILIFSAMFNDNFGAINRDILIPLFGHGAP--WLTDPFWSRFALIMIQTWLGFPFVFALFT 306
Query: 187 AALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNA 246
LQS+ EAA +DGAN Q+FRH+ +P + A I+ A +F F + YL+N
Sbjct: 307 GVLQSISSDWYEAADMDGANRLQKFRHITMPHILFATAPLLIMQYAGNFNNFTIIYLFNQ 366
Query: 247 G 247
G
Sbjct: 367 G 367
>pir||A72283 maltose ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981755|gb|AAD36278.1|AE001777_4
(AE001777) maltose ABC transporter, permease protein
[Thermotoga maritima]
Length = 577
Score = 157 bits (394), Expect = 1e-37
Identities = 87/258 (33%), Positives = 140/258 (53%), Gaps = 17/258 (6%)
Query: 54 GTLKFVGLENFKWILSDEK----FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRG 109
G + FVG +NF I+ D K F F WT+++ SV L + VG+ +L+ N+ ++G
Sbjct: 312 GFIDFVGWKNFLRIVKDPKVSGPFFRIFLWTFVWAVLSVVLSLAVGLPFALVLNNPRLKG 371
Query: 110 KMIYRALLIIPWALPLLFSITVWKF-MFDPVFGPINQLLKSIGISNPPNWINDPFWAFLA 168
+ +YR LLIIPWA+P+ S VW+ + + +G IN+ L + P W NDPFWA +
Sbjct: 372 RNLYRTLLIIPWAIPVFISALVWRNGLLNESYGVINKFLLPLFGLEPIKWFNDPFWARVG 431
Query: 169 LNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATI 228
+ ++ VWL +P+MMT+ ALQS+P L E A IDGA ++RF H+ P + IA +
Sbjct: 432 VLLVNVWLTFPYMMTISLGALQSIPPELYEVAAIDGAGRFRRFVHITFPLLMTIIAPLLV 491
Query: 229 LTSAASFQYFMVPYLYNAG----------LFEDKFILLYGFRKAF--GATPHYGRATAVM 276
+ A SF F + YL G ++ Y ++ AF G +G A+A+
Sbjct: 492 SSFAFSFNNFTIIYLITGGGPPIPNSTTPTGYTDILISYVYKLAFEGGQGQDFGFASAIS 551
Query: 277 VIATMVLAIYMYINVKIT 294
++ ++ ++N K++
Sbjct: 552 ILIFFLVGGISFVNFKLS 569
>emb|CAC11274.1| (AL445063) inner membrane protein of trehalose/maltose (malF)
related protein [Thermoplasma acidophilum]
Length = 304
Score = 157 bits (393), Expect = 2e-37
Identities = 88/288 (30%), Positives = 151/288 (51%), Gaps = 9/288 (3%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
+++ +LP I +F + +PI IY +FTN + +F F+GL N+ I++
Sbjct: 21 SIIYVLPVIAVLIFLDFYPIGVGIYFSFTNLNVVHFY-----DYSFIGLANYVSIVTSSA 75
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
F T I+ S L V +G L+L+ N K + GK YR L++ PWA P ++ +W
Sbjct: 76 FLQIILHTIIWSVGSTALMVPMGFALALVINQKGLIGKRFYRTLILFPWAYPAFITLLIW 135
Query: 133 KFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSV 192
K M FG IN++L +IGI W+ P A L+L ++ +WL++P+ V TA++QS+
Sbjct: 136 KNMLSYHFGIINEVLNAIGIKG-LFWLGSPSLAMLSLILVNLWLSFPYYTYVFTASIQSI 194
Query: 193 PDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--LFE 250
P L +AA +DG + R + +P +S+ AF TI ++ F +L G L
Sbjct: 195 PSELYDAAEMDGYGTLRTLRRITIPMLSRQFAFITIFGFIFTWNNFYPVFLLTGGGPLIS 254
Query: 251 DKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQE 298
+ ++ Y + +AF YG A +I+ ++L + + + K T++ +
Sbjct: 255 TQILITYSYYEAFTYLA-YGVGIAYAIISILILLVLVVLANKYTKMMQ 301
>dbj|BAB05739.1| (AP001514) maltose/maltodextrin transport system (permease)
[Bacillus halodurans]
Length = 418
Score = 153 bits (382), Expect = 3e-36
Identities = 86/234 (36%), Positives = 136/234 (57%), Gaps = 8/234 (3%)
Query: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAF- 77
P + +F ++PI++S LAFTN L + P A + +VGLE F I + + +R+ F
Sbjct: 127 PSLFILIFAVIFPILFSFALAFTNYNLYHSP--PANLVDWVGLETFSKIFTVDIWRATFF 184
Query: 78 ---KWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
WT I+ + T +V +GI L+++ N K ++ K +R +LI+PWA+P +I ++
Sbjct: 185 DVLSWTVIWTLVASTFQVSLGILLAVVVNQKDLQFKKFFRTILILPWAVPGFVTILIFAG 244
Query: 135 MFDPVFGPI-NQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVP 193
+F+ FG I N +L + GI +P W+ + W +AL I+ WL +P++ V T LQS+P
Sbjct: 245 LFNDSFGAINNDILAAFGI-DPIPWMTNSTWTKVALITIQGWLGFPYIFLVTTGVLQSIP 303
Query: 194 DTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
D L EAA IDGA+ + +FRH+ LP + IA I +F F + YL+N G
Sbjct: 304 DDLYEAATIDGASVFSKFRHITLPMILIAIAPVIITQFTFNFNNFNIIYLFNGG 357
>sp|Q04698|MALC_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROTEIN MALC
>gi|479207|pir||S32570 malC protein - Streptococcus
pneumoniae >gi|153724|gb|AAA26926.1| (L08611) MalC
[Streptococcus pneumoniae]
Length = 430
Score = 152 bits (379), Expect = 7e-36
Identities = 93/293 (31%), Positives = 150/293 (50%), Gaps = 22/293 (7%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+LI+P A F ++P+I ++ +AFTN + P K L +VGL NF I S FR
Sbjct: 126 LLIIPSYVAMTFAIIFPVIVTLMIAFTNYDFQHLPPNKL--LDWVGLTNFTNIWSLSTFR 183
Query: 75 SAF----KWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT 130
SAF WT I+ + TL++++GI +++ N +++GK I+ + A+P +I
Sbjct: 184 SAFGSVLSWTIIWALAASTLQIVIGIFTAIIANQPFIKGKRIFGVIFPSSLAVPAFITIL 243
Query: 131 VWKFMFDPVFGPINQLLKSIGISNPP-------NWINDPFWAFLALNIIEVWLAYPFMMT 183
+ MF+ G IN + I P W DP W +AL +++ WL +P++
Sbjct: 244 TFSNMFNDSVGAINTQVLPILAKFLPFLDGALIPWKTDPTWTKIALIMMQGWLGFPYIYV 303
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
+ LQS+P+ L EAA IDGAN WQ+FR++ P + A I +F F + YL
Sbjct: 304 LTLGILQSIPNDLYEAAYIDGANAWQKFRNITFPMILAVAAPTLISQYTFNFNNFSIMYL 363
Query: 244 YN--------AGLFEDKFILLYGFRKAFGATPHYGRATAV-MVIATMVLAIYM 287
+N G ++ + +R G +P Y A AV ++I+ +V++I M
Sbjct: 364 FNGGGPGSVGGGAGSTDILISWIYRLTTGTSPQYSMAAAVTLIISIIVISISM 416
>emb|CAB90878.1| (AL355752) putative maltose permease [Streptomyces coelicolor
A3(2)]
Length = 334
Score = 151 bits (377), Expect = 1e-35
Identities = 93/285 (32%), Positives = 147/285 (50%), Gaps = 14/285 (4%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPV-----EKAGTLKFVGLENFKWI 67
A +I P L+P+ Y +YL T+A N E T KFVGL+N+ I
Sbjct: 36 AYAMIAPVAVVIGVLVLYPLGYGLYLTLTDANSLNSARTIGVNEIEATYKFVGLDNYADI 95
Query: 68 L----SDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWAL 123
L + ++F S F WT ++ A V L +G+GL+LL N K +RG+ YR +L++PWA+
Sbjct: 96 LWGPTAYDRFWSHFIWTIVWTAVCVGLHFFIGLGLALLLNQK-LRGRTFYRLILVLPWAV 154
Query: 124 PLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMT 183
P ++ W+FM G IN L + + P W+ D FW + ++ W PFMM
Sbjct: 155 PTFVTVFGWRFMLADQ-GIINSALDWLHLPTPA-WLEDTFWQRFSAIMVNTWCGVPFMMV 212
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
+ LQS+ ++L EA+ +DGAN WQRFR+V LP + + +L +F F V +L
Sbjct: 213 SLLGGLQSIDNSLYEASEMDGANAWQRFRYVTLPGLRSVSSTVVLLGIIWTFNQFAVIFL 272
Query: 244 YNAGLFEDKFILL-YGFRKAFGATPH-YGRATAVMVIATMVLAIY 286
D IL+ + ++ FG P + ++ A ++ +L ++
Sbjct: 273 LFGNTAPDAQILVTWAYQLGFGQQPRDFAQSAAYGILLLAILIVF 317
>gb|AAK41418.1| Sugar transport protein, hypothetical [Sulfolobus solfataricus]
Length = 297
Score = 149 bits (373), Expect = 3e-35
Identities = 92/299 (30%), Positives = 162/299 (53%), Gaps = 10/299 (3%)
Query: 1 MGEDEMKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVG 60
M EMKK + +L ILP + +F ++P++YS+Y++FTN L +F T +VG
Sbjct: 1 MVNQEMKKEKLFSLFYILPIVIVTVFLFVFPLLYSVYISFTNLSLLHFL-----TYSYVG 55
Query: 61 LENFKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIP 120
L N+ I F K T I+ S+ + +G L+L+ N ++G+ I+ A+LI+P
Sbjct: 56 LRNYLIIFQYGYFLELLKNTLIWTIGSLLTMMSLGFVLALILNQTDLKGRSIFYAILILP 115
Query: 121 WALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPF 180
WA P SI +W+ ++ +G +N+L+ + N + A++ L WL++P+
Sbjct: 116 WAFPGFISILIWQGLWVDPYGMMNRLILPLLHLPKVNSLTSTTDAWIELIATNDWLSFPY 175
Query: 181 MMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMV 240
MTV +ALQS+P L + A +DGAN + +F + LP++ + IAF I + ++ F
Sbjct: 176 FMTVFYSALQSIPRELYDIADLDGANAFTKFLTITLPSLKRTIAFVFITSFVFTWNNFYP 235
Query: 241 PYLYNA---GLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRL 296
Y+ G+ + FI +Y +++AF ++ A A +I+T+ + + I +K TR+
Sbjct: 236 IYVLTGGGPGISTETFI-VYAYQEAFSYN-NFALAAAWSIISTIFVIVLGIIVIKYTRI 292
>emb|CAB08006.1| (Z94043) hypothetical protein [Bacillus subtilis]
Length = 421
Score = 149 bits (372), Expect = 5e-35
Identities = 84/234 (35%), Positives = 136/234 (57%), Gaps = 8/234 (3%)
Query: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAF- 77
P + +F ++PI++S LAFTN L + P K + +VG + F I + + +RS F
Sbjct: 130 PSLFILIFAVIFPILFSFALAFTNYDLYHSPPAKL--IDWVGFQTFANIFTVDIWRSTFF 187
Query: 78 ---KWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
WT ++ + TL+V +GI L+++ N K +R K +R +LI+PWA+P +I ++
Sbjct: 188 DVLAWTVVWTLAASTLQVTLGIFLAIIVNQKDLRFKRFFRTILILPWAVPGFVTILIFAG 247
Query: 135 MFDPVFGPIN-QLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVP 193
+F+ FG +N +L GI +P W+ D W+ LAL +++ WL +P++ V T LQS+P
Sbjct: 248 LFNDSFGAMNHDILAFFGI-DPLPWMTDANWSRLALILMQGWLGFPYIFLVSTGVLQSIP 306
Query: 194 DTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
D L EAA IDGA+ + + R++ LP V +A I +F F + YL+N G
Sbjct: 307 DDLYEAATIDGASVFSKLRYITLPMVFIAMAPIIITQFTFNFNNFNIIYLFNGG 360
>pir||D70038 maltodextrin transport system permease homolog yvfL - Bacillus
subtilis >gi|2635928|emb|CAB15420.1| (Z99121) similar to
maltodextrin transport system permease [Bacillus
subtilis]
Length = 418
Score = 149 bits (372), Expect = 5e-35
Identities = 84/234 (35%), Positives = 136/234 (57%), Gaps = 8/234 (3%)
Query: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAF- 77
P + +F ++PI++S LAFTN L + P K + +VG + F I + + +RS F
Sbjct: 127 PSLFILIFAVIFPILFSFALAFTNYDLYHSPPAKL--IDWVGFQTFANIFTVDIWRSTFF 184
Query: 78 ---KWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
WT ++ + TL+V +GI L+++ N K +R K +R +LI+PWA+P +I ++
Sbjct: 185 DVLAWTVVWTLAASTLQVTLGIFLAIIVNQKDLRFKRFFRTILILPWAVPGFVTILIFAG 244
Query: 135 MFDPVFGPIN-QLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVP 193
+F+ FG +N +L GI +P W+ D W+ LAL +++ WL +P++ V T LQS+P
Sbjct: 245 LFNDSFGAMNHDILAFFGI-DPLPWMTDANWSRLALILMQGWLGFPYIFLVSTGVLQSIP 303
Query: 194 DTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
D L EAA IDGA+ + + R++ LP V +A I +F F + YL+N G
Sbjct: 304 DDLYEAATIDGASVFSKLRYITLPMVFIAMAPIIITQFTFNFNNFNIIYLFNGG 357
>pir||H70033 maltodextrin transport system permease homolog yvdH - Bacillus
subtilis >gi|1945667|emb|CAB08037.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635973|emb|CAB15465.1| (Z99121) similar to
maltodextrin transport system permease [Bacillus
subtilis]
Length = 435
Score = 148 bits (371), Expect = 6e-35
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 20/284 (7%)
Query: 18 LPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAF 77
LP +F ++P++ ++++A TN + P + + +VG +NF I +R F
Sbjct: 134 LPAYIMMVFVIIFPVLVTLFVALTNYDFYHIPPNRL--IDWVGFKNFLNIFFLGSYRETF 191
Query: 78 K----WTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWK 133
WT I+ + TL++++GI +L N +++GK I+R + + PWA+P +I +
Sbjct: 192 VNVLGWTVIWTICATTLQIILGIVTALFVNQDFIKGKRIFRMIFLFPWAVPAFITIMSFS 251
Query: 134 FMFDPVFGPINQ----LLKSIGISNPPN--WINDPFWAFLALNIIEVWLAYPFMMTVITA 187
MF+ G +N L + P W DPFW AL +I+ WL +P++ ++T
Sbjct: 252 NMFNDSIGAVNAQVIPLFNHLPFVELPAIAWKTDPFWTKTALIMIQTWLGFPYIYVMVTG 311
Query: 188 ALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYN-- 245
LQ++P L EAA IDGA + QRFRH+ P + A I +F F + YL+N
Sbjct: 312 VLQAIPGELYEAAKIDGATFIQRFRHITFPMILFATAPVMITQYTFNFNNFSIIYLFNEG 371
Query: 246 ------AGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVL 283
AG ++ + ++ G +P Y A AV ++ + ++
Sbjct: 372 GPGSAGAGAGSTDILISWIYKLTTGTSPQYSVAAAVTLLISFIV 415
>pir||H75503 maltose ABC transporter, permease protein - Deinococcus radiodurans
(strain R1) >gi|6458257|gb|AAF10142.1|AE001914_4
(AE001914) maltose ABC transporter, permease protein
[Deinococcus radiodurans]
Length = 468
Score = 148 bits (371), Expect = 6e-35
Identities = 82/259 (31%), Positives = 138/259 (52%), Gaps = 15/259 (5%)
Query: 57 KFVGLENFKWILS--DEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYR 114
++VGL NF+ I + F WT F +V L L G+ L +L +K ++G+ IYR
Sbjct: 210 QYVGLANFQEIFAKASRALWPVFVWTVAFAFFTVILNALAGLILGILLYNKRLKGRNIYR 269
Query: 115 ALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEV 174
LL +PWA+P + S+ +WK + D FG +N+ L +G+ P W+NDP WA +++ + +
Sbjct: 270 TLLFLPWAIPAVISVQMWKALLDQNFGIVNKTLGLLGLFAVP-WLNDPLWAKISILFVNL 328
Query: 175 WLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAAS 234
WL +P+MMT +AL ++ + L EAA IDGA+ WQ+ ++ LP + + + T A +
Sbjct: 329 WLGFPYMMTATISALATINEDLYEAASIDGASRWQQITNITLPLLRQSFTPILLSTFAFN 388
Query: 235 FQYFMVPYLYNAG----------LFEDKFILLYGFRKAFGAT--PHYGRATAVMVIATMV 282
F F + YL AG +L +G+ AF ++ +Y A+A+ +I +
Sbjct: 389 FNNFGIIYLLTAGGPAQEGRESTAQSTDILLSWGYNTAFASSGGQNYALASAIALIIFFL 448
Query: 283 LAIYMYINVKITRLQEGAK 301
+N K + + A+
Sbjct: 449 TLAISLVNFKAAGVFDEAR 467
>gb|AAG09707.1|AF218837_2 (AF218837) unknown [Pasteurella multocida]
Length = 294
Score = 146 bits (365), Expect = 3e-34
Identities = 97/285 (34%), Positives = 148/285 (51%), Gaps = 17/285 (5%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+ +LP I ++P + SI+ +FTN L FVGL N++ +LSD F
Sbjct: 12 IFVLPAILVVSVLFIYPFLSSIFYSFTNKNL------IMPHYSFVGLANYRAVLSDPNFW 65
Query: 75 SAF----KWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT 130
+F KWT IF S+T +VLVG L+L N + K +Y+ LLIIPWA P +
Sbjct: 66 MSFFNSLKWT-IF---SLTGQVLVGFFLALALN-RVKHFKWLYKILLIIPWAFPTIVIAF 120
Query: 131 VWKFMFDPVFGPINQLLKSIGISN-PPNWINDPFWAFLALNIIEVWLAYPFMMTVITAAL 189
W+++ + V+G + +L +G+ PN+++D WAF+ L I +W P +M + +AL
Sbjct: 121 SWQWILNGVYGYLPNMLVQLGLMEIAPNFLSDRTWAFVCLVFINIWFGAPMIMVNVLSAL 180
Query: 190 QSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLF 249
Q+VP EAA IDGAN WQ FR++ LP + + +L + F F + YL G
Sbjct: 181 QTVPTDQYEAAKIDGANAWQIFRYITLPHIKVVVGLLVVLRTVWVFNNFDIIYLITGGGP 240
Query: 250 EDKFILLYGFRKAFG-ATPHYGRATAVMVIATMVLAIYMYINVKI 293
+ + L F G + GR++AV V+ + L +I KI
Sbjct: 241 ANATMTLPIFAYDMGWGSKLLGRSSAVTVLLFIFLLSVYFIYFKI 285
>emb|CAB61807.1| (AL133236) putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 315
Score = 146 bits (364), Expect = 4e-34
Identities = 90/291 (30%), Positives = 155/291 (52%), Gaps = 15/291 (5%)
Query: 8 KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWI 67
K T+AA+ + P I + N +P+ Y++ + + + AG +F+GLEN+
Sbjct: 32 KKTMAAM--LAPSIFLLIALNAYPLFYAVSQSLRDGGI-------AGPGEFIGLENYTTA 82
Query: 68 LSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLF 127
L D F A ++T +F SV + ++G L+L+ + G+ ++R LL++PW +P++
Sbjct: 83 LQDPAFWEAVRFTLLFTVVSVFVAWVIGTALALVLRRSFP-GRSVFRVLLLLPWVVPVVV 141
Query: 128 SITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITA 187
S T W F+ P+ LL+ +G + N P A + I ++W PFMM ++++
Sbjct: 142 STTSWNFLVATPSSPVPTLLRELGFGDVQILAN-PGSAMAIVIIFKIWGTVPFMMMMMSS 200
Query: 188 ALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
ALQ+V ++ EA +DGA+ WQR RHVILP +SKP+ A +L S + F +L G
Sbjct: 201 ALQAVDPSVEEACRLDGASRWQRIRHVILPIMSKPVYIAWVLASIFTINDFPSVFLLTGG 260
Query: 248 --LFEDKFILLYGFRKAF-GATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+ ++++ +R F YG A A +I T ++A+ +Y +I R
Sbjct: 261 GPVGSTSTLVVFAYRLVFQDFRTGYGVAVA-FLITTALIAMSIYFFRRINR 310
>gb|AAC44394.1| (U43526) ORF-3 [Streptococcus pneumoniae]
Length = 294
Score = 144 bits (360), Expect = 1e-33
Identities = 95/290 (32%), Positives = 148/290 (50%), Gaps = 17/290 (5%)
Query: 6 MKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFK 65
+K+ + + +LP + ++P SI+ +FTN L KFVGL N+K
Sbjct: 2 VKERNLTRWIFVLPAMIIVGLLFVYPFFSSIFYSFTNKHL------IMPNYKFVGLANYK 55
Query: 66 WILSDEKFRSAF----KWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPW 121
+LSD F +AF KWT IF S+ +VLVG L+L + + K +YR LLI+PW
Sbjct: 56 AVLSDPNFFNAFFNSIKWT-IF---SLVGQVLVGFVLALALH-RVRHFKKLYRTLLIVPW 110
Query: 122 ALPLLFSITVWKFMFDPVFGPINQLLKSIGI-SNPPNWINDPFWAFLALNIIEVWLAYPF 180
A P + W+++ + V+G + L+ +G+ + P ++ D WAFL L I +W P
Sbjct: 111 AFPTIVIAFSWQWILNGVYGYLPNLIVKLGLMEHTPAFLTDSTWAFLCLVFINIWFGAPM 170
Query: 181 MMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMV 240
+M + +ALQ+VP+ EAA IDGA+ WQ F+ ++ P + + +L + F F +
Sbjct: 171 IMVNVLSALQTVPEEQFEAAKIDGASSWQVFKFIVFPHIKVVVGLLVVLRTVWIFNNFDI 230
Query: 241 PYLYNAGLFEDKFILLYGFRKAFG-ATPHYGRATAVMVIATMVLAIYMYI 289
YL G + L F G T GRA+AV V+ + L +I
Sbjct: 231 IYLITGGGPANATTTLPIFAYNLGWGTKLLGRASAVTVLLFIFLVAICFI 280
>emb|CAA68973.1| (Y07706) putative maltose permease [Streptomyces coelicolor]
Length = 334
Score = 143 bits (356), Expect = 3e-33
Identities = 90/285 (31%), Positives = 144/285 (49%), Gaps = 14/285 (4%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPV-----EKAGTLKFVGLENFKWI 67
A +I P L+P+ Y +YL T+A N E T KFVGL+N+ I
Sbjct: 36 AYAMIAPVAVVIGDLVLYPLGYGLYLTLTDANSLNSARTIGVNEIEATYKFVGLDNYADI 95
Query: 68 L----SDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWAL 123
L + ++F S F WT ++ A V L +G+GL+LL N K +RG+ YR +L++PWA+
Sbjct: 96 LWGPTAYDRFWSHFIWTIVWTAVCVGLHFFIGLGLALLLNQK-LRGRTFYRLILVLPWAV 154
Query: 124 PLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMT 183
P ++ W+FM G IN L + + P W+ D FW + ++ W PFMM
Sbjct: 155 PTFVTVFGWRFMLADQ-GIINSALDWLHLPTPA-WLEDTFWQRFSAIMVNTWCGVPFMMV 212
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
+ + ++L EA+ +DGAN WQRFR+V LP + + +L +F F V +L
Sbjct: 213 SLLGGPPVIDNSLYEASEMDGANAWQRFRYVTLPGLRSVSSTVVLLGIIWTFNQFAVIFL 272
Query: 244 YNAGLFEDKFILL-YGFRKAFGATPH-YGRATAVMVIATMVLAIY 286
D IL+ + ++ FG P + ++ A ++ +L ++
Sbjct: 273 LFGNTAPDAQILVTWAYQLGFGQQPRDFAQSAAYGILLLAILIVF 317
>pir||D82557 ABC transporter sugar permease XF2447 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9107640|gb|AAF85246.1|AE004053_9 (AE004053) ABC
transporter sugar permease [Xylella fastidiosa]
Length = 293
Score = 142 bits (354), Expect = 6e-33
Identities = 85/280 (30%), Positives = 145/280 (51%), Gaps = 6/280 (2%)
Query: 6 MKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFK 65
M++ ++A V P + F P++ ++ L+ T+ L + + L+FVGL+N+
Sbjct: 1 MRRASLAGWVFAGPAVLVIGMFFGVPVLMALVLSLTDFDL--YALANPMYLRFVGLDNYL 58
Query: 66 WILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPL 125
+L F A T FV + + + V +G +LL NS+ R K ++R +L P L
Sbjct: 59 ELLHTPLFWKALWNTTYFVLLGMPMSITVSLGAALLLNSRAARFKGLFRTVLFAPVVTTL 118
Query: 126 LFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVI 185
+ +W+++F +G +N LL +GI +P +W+ DP A + + VW + + M +
Sbjct: 119 VAVALIWRYLFHLKYGVVNWLLNCVGI-HPIDWLGDPHLAMPMIMLFAVWKNFGYNMVIF 177
Query: 186 TAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYN 245
A LQ++P L EAA IDGA+ WQ+F H+ LP + + I+T + FQ F PY+
Sbjct: 178 LAGLQAIPQDLYEAARIDGASKWQQFLHITLPMLGPVLMVVGIITVSGYFQLFAEPYVMT 237
Query: 246 AG--LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVL 283
G L +L + F + F + GRA+AV + +V+
Sbjct: 238 RGDPLQSTVSVLYFMFEEGF-KWWNLGRASAVAFLLFLVV 276
>sp|P02916|MALF_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALF
>gi|72500|pir||MMECMF maltose transport inner membrane
protein malF - Escherichia coli
>gi|396368|gb|AAC43127.1| (U00006) maltose transport
inner membrane protein [Escherichia coli]
>gi|455175|gb|AAB59055.1| (J01648) cytoplasmic
maltose-binding protein [Escherichia coli]
>gi|1790465|gb|AAC77003.1| (AE000476) part of maltose
permease, periplasmic [Escherichia coli K12]
Length = 514
Score = 139 bits (348), Expect = 3e-32
Identities = 89/270 (32%), Positives = 141/270 (51%), Gaps = 19/270 (7%)
Query: 46 GNFPVEKA--GTLKFVGLENFKWILSDE----KFRSAFKWTWIFVATSVTLKVLVGIGLS 99
GN+ EK G G +NF + +DE F + F WT +F +V L V VG+ L+
Sbjct: 244 GNWGDEKLSPGYTVTTGWKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLA 303
Query: 100 LLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWI 159
L + +RGK +YR LLI+P+A+P SI ++K +F+ FG IN +L ++ P W
Sbjct: 304 CLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSAL-FGVKPAWF 362
Query: 160 NDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTV 219
+DP A L I+ WL YP+MM + L+++PD L EA+ +DGA +Q F + LP +
Sbjct: 363 SDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLL 422
Query: 220 SKPIAFATILTSAASFQYF-MVPYLYNAG---------LFEDKFILLYGFRKAF--GATP 267
KP+ I + A +F F ++ L N G ++ Y +R AF G
Sbjct: 423 IKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQ 482
Query: 268 HYGRATAVMVIATMVLAIYMYINVKITRLQ 297
+G A A+ + +++ +N+K TR++
Sbjct: 483 DFGLAAAIATLIFLLVGALAIVNLKATRMK 512
>pir||T46751 inner membrane protein malF [validated] - Thermococcus litoralis
>gi|2828821|gb|AAC38137.1| (AF012836) inner membrane
protein MalF [Thermococcus litoralis]
Length = 300
Score = 139 bits (348), Expect = 3e-32
Identities = 81/283 (28%), Positives = 153/283 (53%), Gaps = 8/283 (2%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
++ILP +T L F + P++ + +++ F EK FVGL N+ +LS +F
Sbjct: 24 LMILPLLTVVLVFIILPVMGTFWISLHRDV--TFIPEKP----FVGLRNYLRVLSAREFW 77
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
+ T F SV+L+ ++G+ +L+ N + ++G+ + RA+++IPWA+P + S W+
Sbjct: 78 YSTFVTVSFSFVSVSLETILGLSFALILNER-LKGRGVLRAIVLIPWAVPTIISARTWEL 136
Query: 135 MFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPD 194
M++ +G N +L +G+S P NW+ P AF A+ I +VW P M ++ A LQ++P
Sbjct: 137 MYNYSYGLFNWILSILGVS-PVNWLGTPISAFFAIVIADVWKTTPLMTLLLLAGLQAIPQ 195
Query: 195 TLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFEDKFI 254
L EAA+IDGA+ ++RF+ + LP + + A IL + + + F + Y+ G
Sbjct: 196 DLYEAALIDGASMFERFKSITLPLLKPVLIVALILRTIDALRVFDIIYVLTGGGPGGATT 255
Query: 255 LLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQ 297
+ + YG +A+ ++ +++ + + +K+ R +
Sbjct: 256 SISLLAFNYYNLGDYGIGSAISILTFVLVLSFTIVYLKVGRFR 298
>sp|P18812|MALF_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALF
>gi|78245|pir||S05332 inner membrane protein malF -
Enterobacter aerogenes
Length = 514
Score = 139 bits (347), Expect = 4e-32
Identities = 85/256 (33%), Positives = 137/256 (53%), Gaps = 19/256 (7%)
Query: 59 VGLENFKWILSDE----KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYR 114
+G +NF + DE F + F WT +F +V L V VG+ L+ L + ++GK IYR
Sbjct: 259 IGWDNFTRVFQDEGIQKPFFAIFVWTVVFSVLTVILTVAVGMVLACLVQWEALKGKAIYR 318
Query: 115 ALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSI-GISNPPNWINDPFWAFLALNIIE 173
LLI+P+A+P SI ++K +F+ FG IN +L ++ GI P W +DP A + I+
Sbjct: 319 VLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGIK--PAWFSDPTTARTMIIIVN 376
Query: 174 VWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAA 233
WL YP+MM + L+++PD L EA+ +DGA +Q F + LP + KP+ I + A
Sbjct: 377 TWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAF 436
Query: 234 SFQYF-MVPYLYNAG---------LFEDKFILLYGFRKAF--GATPHYGRATAVMVIATM 281
+F F ++ L N G ++ Y +R AF G +G A A+ + +
Sbjct: 437 NFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVSYTYRIAFEGGGGQDFGLAAAIATLIFL 496
Query: 282 VLAIYMYINVKITRLQ 297
++ +N+K TR++
Sbjct: 497 LVGALAIVNLKATRMK 512
>sp|P26467|MALF_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALF
>gi|96792|pir||S20604 inner membrane protein malF -
Salmonella typhimurium >gi|47774|emb|CAA38190.1|
(X54292) malF [Salmonella typhimurium]
Length = 514
Score = 139 bits (347), Expect = 4e-32
Identities = 85/256 (33%), Positives = 138/256 (53%), Gaps = 19/256 (7%)
Query: 59 VGLENFKWILSDE----KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYR 114
+G +NF + +DE F + F WT +F +V L V VG+ L+ L + ++GK IYR
Sbjct: 259 IGAKNFTRVFTDEGSQKPFFAIFVWTVVFSVLTVVLTVAVGMVLACLVQWEALKGKAIYR 318
Query: 115 ALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSI-GISNPPNWINDPFWAFLALNIIE 173
LLI+P+A+P SI ++K +F+ FG IN +L ++ GI P W +DP A + I+
Sbjct: 319 VLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGIK--PAWFSDPNTARAMVIIVN 376
Query: 174 VWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAA 233
WL YP+MM + L+++PD L EA+ +DGA +Q F + LP + KP+ I + A
Sbjct: 377 TWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMIASFAF 436
Query: 234 SFQYF-MVPYLYNAG---------LFEDKFILLYGFRKAF--GATPHYGRATAVMVIATM 281
+F F ++ L N G ++ Y +R AF G +G A A+ + +
Sbjct: 437 NFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVSYTYRIAFEGGGGQDFGLAAAIATLIFL 496
Query: 282 VLAIYMYINVKITRLQ 297
++ +N+K TR++
Sbjct: 497 LVGALAIVNLKATRMK 512
>pir||G75395 ABC transporter, permease protein, MalFG family - Deinococcus
radiodurans (strain R1)
>gi|6459198|gb|AAF11009.1|AE001988_5 (AE001988) ABC
transporter, permease protein, MalFG family [Deinococcus
radiodurans]
Length = 327
Score = 139 bits (346), Expect = 5e-32
Identities = 84/302 (27%), Positives = 162/302 (52%), Gaps = 19/302 (6%)
Query: 7 KKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKW 66
K + A+++++P + +P++ +IYL+FT+ N P K ++GL+N+ W
Sbjct: 32 KTRSRTAVLMLIPMLLVLAAVAGYPLLRTIYLSFTDYNFLNDPAPK-----WIGLQNY-W 85
Query: 67 ILSDEKFRSAF----KW------TWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRAL 116
++E +W T F SV+L+ L+G+ +L+ NS + +GK + R
Sbjct: 86 FTTEEGVGLGLLQTPEWWQSVWNTVKFTLLSVSLETLLGLAFALVINSNF-KGKGLMRTA 144
Query: 117 LIIPWALPLLFSITVWKFMFDPVFGPINQLLKSIG-ISNPPNWINDPFWAFLALNIIEVW 175
+++PWA+P + S +W +M++ FG I+Q +S+G + +++++P A AL ++VW
Sbjct: 145 ILVPWAIPTVVSAQMWNWMYNDSFGIISQWGQSLGFLKTGESFLSNPDTALGALVAVDVW 204
Query: 176 LAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASF 235
PFM ++ A LQ++P + EAA +DGA+ W +F + LP ++ + A I + S
Sbjct: 205 KTTPFMALLLLAGLQTIPGDMYEAADVDGASAWTKFWRLTLPLLTPALLVALIFRTLDSL 264
Query: 236 QYFMVPYLYNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+ F +PY+ E + +Y R+ A +G +AV V+ +++ ++ I V R
Sbjct: 265 RVFDMPYIVKGNAPETMTMSIYA-RQELIANSQFGFGSAVSVLIFLIIMVFTAIYVTSLR 323
Query: 296 LQ 297
++
Sbjct: 324 VK 325
>dbj|BAB04796.1| (AP001510) glycerol-3-phosphate ABC transporter (permease)
[Bacillus halodurans]
Length = 315
Score = 136 bits (338), Expect = 4e-31
Identities = 89/285 (31%), Positives = 148/285 (51%), Gaps = 14/285 (4%)
Query: 11 IAALVLILPGITAFLFFNLWPIIYSIYLAF--TNAQLGNFPVEKAGTLKFVGLENFKWIL 68
IAAL L P + F F +P+I ++YL+F T+AQ GN + FVGLEN+ ++
Sbjct: 33 IAALYLF-PSLLLFSIFLFYPMIRTVYLSFFLTDAQ-GNAAL-------FVGLENYLYLF 83
Query: 69 SDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFS 128
+ FR + T++FV +V VL+ + L+L+ N K +RG ++R + + + S
Sbjct: 84 QSDPFRKSASATFLFVLYTVPTGVLLALFLALIANEK-LRGIGLFRTIFSSTMGMSVAAS 142
Query: 129 ITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAA 188
+W F+F P G +N +L IGI + P W+ DP WA +++ I +W+ F V+
Sbjct: 143 AVIWLFLFHPTVGILNSILGFIGIDSIP-WLLDPKWALISIAITTIWMNTGFSFLVLLGG 201
Query: 189 LQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYF-MVPYLYNAG 247
LQ++ L E+A IDGA Y+ + + +P +S + F +T SFQ F V L G
Sbjct: 202 LQNIDQHLYESARIDGAGYFYQLFRITVPMLSPTLFFIITITFIHSFQSFGQVDILTGGG 261
Query: 248 LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVK 292
E +++Y + +G A+A VI +++ + + K
Sbjct: 262 PAEATNLIVYSIYQDAFINYQFGTASAQAVILFLLVLLLTLVQFK 306
>gb|AAF70321.1|AF260245_1 (AF260245) MalF [Vibrio cholerae]
Length = 283
Score = 134 bits (334), Expect = 1e-30
Identities = 81/272 (29%), Positives = 142/272 (51%), Gaps = 21/272 (7%)
Query: 46 GNFPVEKA--GTLKFVGLENFKWILSDE----KFRSAFKWTWIFVATSVTLKVLVGIGLS 99
G F E+ G + +G NF+ + DE F + F WT IF +V +++G+ L+
Sbjct: 13 GEFVGERVSPGFVVSIGTHNFERVWKDEGIKEPFINIFIWTVIFSVLTVIFTLMIGLVLA 72
Query: 100 LLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSI-GISNPPNW 158
+ + ++G+ +YR LLI+P+A+P SI +++ +F+ FG IN +L + G+S P W
Sbjct: 73 SVVQWEALKGRAVYRVLLILPYAVPAFISILIFRGLFNQSFGEINMVLNGLFGLS--PAW 130
Query: 159 INDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPT 218
+DP A + I+ WL +P+MM L+++PD L EA+ IDGAN+ F + LP
Sbjct: 131 FSDPLLAKTMVLIVNTWLGFPYMMIFCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPM 190
Query: 219 VSKPIAFATILTSAASFQYFMVPYLYNAG----------LFEDKFILLYGFRKAFGAT-- 266
+ KP+ I + A +F F++ L G ++ Y +R AF T
Sbjct: 191 MIKPLTPLLIASFAFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGG 250
Query: 267 PHYGRATAVMVIATMVLAIYMYINVKITRLQE 298
+G A+A+ + +++ +N++ T+L +
Sbjct: 251 QDFGLASAIATLIFLLVGALALLNLRFTKLSQ 282
>pir||G82397 maltose ABC transporter, permease protein VCA0944 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658381|gb|AAF96840.1| (AE004421) maltose ABC
transporter, permease protein [Vibrio cholerae]
Length = 524
Score = 134 bits (334), Expect = 1e-30
Identities = 81/272 (29%), Positives = 142/272 (51%), Gaps = 21/272 (7%)
Query: 46 GNFPVEKA--GTLKFVGLENFKWILSDE----KFRSAFKWTWIFVATSVTLKVLVGIGLS 99
G F E+ G + +G NF+ + DE F + F WT IF +V +++G+ L+
Sbjct: 254 GEFVGERVSPGFVVSIGTHNFERVWKDEGIKEPFINIFIWTVIFSVLTVIFTLMIGLVLA 313
Query: 100 LLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSI-GISNPPNW 158
+ + ++G+ +YR LLI+P+A+P SI +++ +F+ FG IN +L + G+S P W
Sbjct: 314 SVVQWEALKGRAVYRVLLILPYAVPAFISILIFRGLFNQSFGEINMVLNGLFGLS--PAW 371
Query: 159 INDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPT 218
+DP A + I+ WL +P+MM L+++PD L EA+ IDGAN+ F + LP
Sbjct: 372 FSDPLLAKTMVLIVNTWLGFPYMMIFCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPM 431
Query: 219 VSKPIAFATILTSAASFQYFMVPYLYNAG----------LFEDKFILLYGFRKAFGAT-- 266
+ KP+ I + A +F F++ L G ++ Y +R AF T
Sbjct: 432 MIKPLTPLLIASFAFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGG 491
Query: 267 PHYGRATAVMVIATMVLAIYMYINVKITRLQE 298
+G A+A+ + +++ +N++ T+L +
Sbjct: 492 QDFGLASAIATLIFLLVGALALLNLRFTKLSQ 523
>pir||T36087 probable binding protein dependent transport protein - Streptomyces
coelicolor >gi|4678630|emb|CAB41203.1| (AL049661)
putative binding protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 327
Score = 132 bits (330), Expect = 4e-30
Identities = 84/291 (28%), Positives = 149/291 (50%), Gaps = 10/291 (3%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
AL+L+ P + +++ P++ + LAFT+ + AGT+ F GL+NF+ I SD
Sbjct: 45 ALLLLAPSLVHLVWWIGLPVVATFALAFTDYDI------LAGTVTFNGLDNFQEIFSDPT 98
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
+ ++ T +F +V + +++ + L+LL N K +RG YR + +P + VW
Sbjct: 99 WNASIWHTVVFTFFTVPVAMVIAVVLALLLNVK-MRGAAWYRTAVFLPHVTATVAIALVW 157
Query: 133 KFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSV 192
+MF+P G +N +L IGI P W+ DP WA A+ ++ +W M + AALQ++
Sbjct: 158 MWMFEPRLGVVNTMLGWIGIDGPV-WLADPDWALTAVIVVSIWKGIGIKMLIYLAALQAM 216
Query: 193 PDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY--NAGLFE 250
P+ + EAA IDGA+ ++F + LP + F +++ SFQ F Y+ + G
Sbjct: 217 PNDVYEAARIDGASQVRQFFSITLPLLKPATFFVLVVSIIDSFQAFDQLYVLTPDGGPGN 276
Query: 251 DKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGAK 301
++ Y + + G A A V+ L + M I+ ++T ++ +
Sbjct: 277 STTVMTYEIYRTAFKEFNMGAACAQSVVLFAFLLVLMLISRRLTGKEDDVR 327
>dbj|BAB07408.1| (AP001519) sugar transport system (permease) [Bacillus halodurans]
Length = 300
Score = 130 bits (324), Expect = 2e-29
Identities = 82/286 (28%), Positives = 144/286 (49%), Gaps = 12/286 (4%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+ P + F L PI+Y+IYL+F L AG +FVG N+ I D + A
Sbjct: 21 LTPALVTIGVFILLPILYAIYLSFQKVNL------LAGFSEFVGFNNYARITDDYRAGIA 74
Query: 77 FKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMF 136
+ T +VA V + ++ + L+ N+K ++G +R + +P ++ FM+
Sbjct: 75 LRNTAFYVAIVVPTQTILALILAACLNAK-IKGTNFFRVVFFLPTLTSSAVLALIFMFMY 133
Query: 137 DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTL 196
+ G +NQ+L S+G+ NW+ DP A LA+ I+ +W PF M + AAL+ +P +L
Sbjct: 134 NNQNGLVNQVLASLGLPTY-NWLGDPSVALLAIMIMNIWATAPFYMVIYLAALKDIPASL 192
Query: 197 IEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGL----FEDK 252
EAA +DGA+ Q+FR++ +P + +F I+ +FQ F Y+++ G
Sbjct: 193 YEAADLDGASTIQKFRYITVPMLRPITSFVVIMGIIGTFQLFDQSYIFSGGSGGPDNSTL 252
Query: 253 FILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQE 298
I+L ++ AF + G A A+ + +++ I I K + ++
Sbjct: 253 TIVLLIYQYAFQSYDQMGYAAALAFLLAVIILIATLIQRKFQKNEQ 298
>dbj|BAB05584.1| (AP001513) sugar transport system (permease) (binding protein
dependent transporter) [Bacillus halodurans]
Length = 309
Score = 130 bits (323), Expect = 3e-29
Identities = 88/286 (30%), Positives = 147/286 (50%), Gaps = 18/286 (6%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENF-KWILSDEKF 73
+ I P I F F L P++YSIY++FT+ L N PV + G +N+ + ++D+ F
Sbjct: 32 LFIAPPIIGFAIFALGPMLYSIYVSFTDFDLYNEPV-------WTGADNYYRLFVTDDLF 84
Query: 74 RSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWK 133
R T+ + A + + + V +G+++ N K V+G ++R +P ++ +W+
Sbjct: 85 RKTVFNTF-YAALGIPIGMAVSLGIAVALNQK-VKGIALFRTAFFLPAVSSVVAITLLWR 142
Query: 134 FMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVP 193
++F+ FG +N +L +GI P W++D WA A+ I VW M + AALQ V
Sbjct: 143 WIFNADFGLLNIMLNYVGIHGP-GWLSDEKWAMPAMIIQGVWGGLGINMILYLAALQGVN 201
Query: 194 DTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSA----ASFQYFMVPYLYNAGLF 249
L EAA IDG N WQ+F H+ +P++S P F ++TS FQ FM+ +
Sbjct: 202 PALYEAADIDGGNAWQKFIHITVPSIS-PTTFFILITSTIGALQDFQRFMI-MTEGGPNY 259
Query: 250 EDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
++ Y F AF G A+A+ + +++ I IN K+ +
Sbjct: 260 STTTVVYYLFLNAF-RYMEMGYASAMAWVLGIIILIITIINFKLAK 304
>pir||D72395 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4980776|gb|AAD35366.1|AE001710_1
(AE001710) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 294
Score = 129 bits (322), Expect = 3e-29
Identities = 80/293 (27%), Positives = 148/293 (50%), Gaps = 12/293 (4%)
Query: 11 IAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSD 70
I +++LP + FL ++P + I+ +F + + + K+ F+GL N+ I D
Sbjct: 5 IVPWLMVLPVLALFLAMTIYPFGFMIWASFRD-----YDLSKSAETHFIGLSNYFQIFRD 59
Query: 71 EKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT 130
+ K+T ++ +V +++++G+ ++ L V+G+ I R+ L+IP +P S
Sbjct: 60 STAIESMKFTAKLLSIAVPVELVLGVLIAFLIRG--VKGEKIIRSSLLIPMMIPPAVSGV 117
Query: 131 VWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
WK +++ FGP+N L G+ +W+ DPF+A L + II+VW PF+ +I A LQ
Sbjct: 118 AWKMLYNFAFGPVNWFLSLFGVPKI-SWLGDPFYAQLGIIIIDVWQWTPFIFLMIYAGLQ 176
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--- 247
S+P LI+AA +DGA++ + F HV P + I A +L + F + ++ G
Sbjct: 177 SIPQDLIDAARVDGADWGRVFLHVEFPLLRPLILVALVLRIIDCLKTFDIVFMTTWGGPG 236
Query: 248 -LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEG 299
+Y +FG Y A +V+++ ++ + + + R Q G
Sbjct: 237 SATHTYSFYIYKVGISFGWNIGYASALSVLLLIVAIVLVNVVFRLVRMRQQLG 289
>emb|CAB59596.1| (AL132662) probable sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 316
Score = 129 bits (320), Expect = 6e-29
Identities = 82/280 (29%), Positives = 143/280 (50%), Gaps = 12/280 (4%)
Query: 7 KKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKW 66
++ T A + P + L ++ P+++S+ L+F + L ++VGL+N++
Sbjct: 25 RRETGTAWAFVSPAVLIVLGLSIVPVVWSLLLSFQASDL-------VTPSRWVGLDNYRA 77
Query: 67 ILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLL 126
+ D F A + T ++ V L +L G+ L+++ N + +R +YR L+ +P+ L
Sbjct: 78 LAQDPNFSQAVRNTLLYTVLYVPLSLLFGLALAMVLNRR-IRFVGLYRTLIFVPFVLSAT 136
Query: 127 FSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVIT 186
++ F+ DP FG N +L +G+S+ +++DP A L L I +W F + V
Sbjct: 137 AQGVLFSFILDPEFGAANSVLHRLGVSSQ-GFLSDPSQALLVLVAITLWSGTGFCVVVYL 195
Query: 187 AALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNA 246
AALQ VP +LIEAA +DGA RHV +PT++ F + + S Q F + Y+
Sbjct: 196 AALQDVPQSLIEAARLDGAGRRHLLRHVTMPTLTPVTVFLVLWQAIQSLQVFDLVYVTTK 255
Query: 247 G--LFEDKFILLYGFRKAF-GATPHYGRATAVMVIATMVL 283
G L I+ + + +AF AT YG + A ++ + L
Sbjct: 256 GGPLGSTTVIVYFIWEQAFKNATAGYGASAAYVLAVALGL 295
>emb|CAB95283.1| (AL359779) putative sugar transport integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 128 bits (319), Expect = 7e-29
Identities = 69/241 (28%), Positives = 130/241 (53%), Gaps = 8/241 (3%)
Query: 7 KKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKW 66
+K +A + + P F F L+P+++++ L+FT+ + AG F+GLEN+ +
Sbjct: 27 RKPFLAPYLFVAPFYVVFAAFGLYPLVFALQLSFTDWK-------GAGEANFIGLENYTY 79
Query: 67 ILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLL 126
+L+ E+F S+ + + V L+++ G+ ++L + +R + ++R I P+ PL+
Sbjct: 80 LLTSEEFWSSLGNSAVMWLLIVPLQIVGGLAAAVLLANAKLRLRGMFRVAFIAPFVTPLV 139
Query: 127 FSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVIT 186
VW FD +G +N L +G+ + +W+ WA L ++ +W F + ++
Sbjct: 140 AMAQVWIVAFDTDYGLVNHLFNFVGLPDV-DWLQSTVWAKPTLALLFLWKTTGFAIIILL 198
Query: 187 AALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNA 246
A LQ+VP + EAA +DGA+ ++F + LP V + IAF ++ + A FQ F P++
Sbjct: 199 AGLQAVPGDVYEAAALDGASRKRQFWSLTLPLVRRSIAFLVVVQTLAVFQMFAEPFVVTQ 258
Query: 247 G 247
G
Sbjct: 259 G 259
>emb|CAB11326.1| (Z98604) possible sugar transport protein [Mycobacterium leprae]
Length = 319
Score = 127 bits (315), Expect = 2e-28
Identities = 87/289 (30%), Positives = 154/289 (53%), Gaps = 15/289 (5%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWIL-SD 70
A + I P + + F L+P+ +S+Y++F + PV FVGL NF+ + SD
Sbjct: 30 AGRMFIAPNLASVSVFMLFPLGFSLYMSFQKWDMFTPPV-------FVGLANFQNLFTSD 82
Query: 71 EKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT 130
F A + +F +V VL+ + ++ + N K V+G I+R ++ +P A+ +
Sbjct: 83 PLFLIALCNSVVFTVGTVIPTVLISLVVAGVLNQK-VKGIGIFRTIVFLPLAISSVVMAV 141
Query: 131 VWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
VW+F+F+ G +N +L IGI P W+ +P WA +L I+ VW + PF V+ AA+Q
Sbjct: 142 VWQFIFNTHNGLLNIMLGWIGIGPIP-WLVNPGWAMASLCIVSVWRSVPFATVVLLAAMQ 200
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY---NAG 247
VP T+ EAA IDGA ++F + +P + I+F +++ +FQ F + Y+ N G
Sbjct: 201 EVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVISFIHAFQTFDLVYVLNGPNGG 260
Query: 248 LFEDKFIL-LYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
++L + F+ AF +G A+A+ ++ +L + + + + + R
Sbjct: 261 PELATYVLGIMLFQHAFSFL-EFGYASALALVTFAILLVLIVLQLLLNR 308
>pir||F72292 glycerol-3-phosphate ABC transporter, permease protein - Thermotoga
maritima (strain MSB8)
>gi|4981667|gb|AAD36197.1|AE001770_9 (AE001770)
glycerol-3-phosphate ABC transporter, permease protein
[Thermotoga maritima]
Length = 302
Score = 126 bits (313), Expect = 4e-28
Identities = 84/291 (28%), Positives = 140/291 (47%), Gaps = 28/291 (9%)
Query: 6 MKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTN-AQLGNFPVEKAGTLKFVGLENF 64
+K + +L+LP F WP +YS+ L+F GN V FVGL NF
Sbjct: 13 IKLKRVLPYLLLLPTFVIITLFIYWPAVYSLRLSFYRITPFGNRMV-------FVGLRNF 65
Query: 65 KWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALP 124
+ + ++ +A K T ++V S+ L + + ++LL N + G I+RAL+ P+A+
Sbjct: 66 QRLFQSPEYLNAIKVTVVYVLASLFLTIFLAFFIALLLNMN-LPGNRIFRALIFTPYAIS 124
Query: 125 LLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTV 184
+ +W F+ +PV G +N +L + W+ +A +A+ I VW PF +
Sbjct: 125 PAIAGVLWSFLLNPVVGHVNYILSKL-FGLQVEWLTTKPYALIAVIIATVWKTLPFDIIF 183
Query: 185 ITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQY--FMV-- 240
A LQ +P LIEA++++GAN W R ++ P +S PI F ++ + SF + F +
Sbjct: 184 YLAGLQDIPQELIEASLVEGANSWARTWKIVFPLLS-PITFYLVIMNLVSFMFSSFAIID 242
Query: 241 ------PYLYNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAI 285
P Y L ++ + F+K G A A VI +++AI
Sbjct: 243 VTTKGGPGNYTTTLIYRLYLDAFAFQK-------IGPAAAQSVILFLIMAI 286
>dbj|BAA28360.1| (D85027) integral membrane protein [Thermus sp. A4]
Length = 282
Score = 125 bits (312), Expect = 5e-28
Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 20/292 (6%)
Query: 10 TIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILS 69
T A + + P + F F WPI+YS YL+F N ++ + +E A N+ +L
Sbjct: 3 TKAPYLFLAPYLVFFGLFWAWPIVYSFYLSFVNTRVYPWRLEPA--------LNWGRLLQ 54
Query: 70 DEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSI 129
D F A K T +A V L + + + L+L NS +R K YR P + +
Sbjct: 55 DPFFAVALKNTLFILAVQVPLMLALALLLALALNSALLRFKGFYRFAFFAPVVVGAVAYS 114
Query: 130 TVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAAL 189
V++ +F+ FG +N LL+++G +W+ P A + + W + ++ A L
Sbjct: 115 AVFRLLFNTEFGAVNALLRALGHPGY-DWLYAPGPAMAVIIVALTWRWTGYNAIILLAGL 173
Query: 190 QSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY----- 244
Q++P L EAA IDGA WQ+FRHV LP + + F +L+ + Q F P+L
Sbjct: 174 QNIPKELYEAAAIDGAGPWQQFRHVTLPGIRPVLLFCLVLSIIGTLQLFTEPFLITGGGP 233
Query: 245 -NAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
NA + ++ GFR ++G A+ + ++ A + ++ +++ R
Sbjct: 234 GNATMTLGLYLYQQGFRSF-----NFGYASTIAYTVALLAAAFSFVQLRLWR 280
>pir||G70943 hypothetical protein Rv2040c - Mycobacterium tuberculosis (strain
H37RV) >gi|2896777|emb|CAA17254.1| (AL021899)
hypothetical protein Rv2040c [Mycobacterium
tuberculosis]
Length = 300
Score = 125 bits (311), Expect = 6e-28
Identities = 81/288 (28%), Positives = 153/288 (53%), Gaps = 15/288 (5%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWIL-SD 70
A + + P + A + F L+P+ +S+Y++F L FV L+NF+ + SD
Sbjct: 11 AGRMFVAPNLAAVVVFMLFPLGFSLYMSFQKWDLFTHAT-------FVRLDNFRNLFTSD 63
Query: 71 EKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT 130
F A T ++ +V V+V + ++ N K ++G ++R ++ +P A+ +
Sbjct: 64 PLFLIAVVNTAVYTVGTVVPTVIVSLVVAAFLNRK-IKGISLFRTVVFLPLAISSVVMAV 122
Query: 131 VWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
VW+F+F+ G +N +L +GI P W+ +P WA ++L ++ VW + PF V+ AA+Q
Sbjct: 123 VWQFVFNTDNGLLNIMLGWLGIGPIP-WLIEPRWAMVSLCLVSVWRSVPFATVVLLAAMQ 181
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY---NAG 247
VP+T+ EAA IDGA ++F + +P + ++F +++ +FQ F + Y+ N G
Sbjct: 182 GVPETVYEAARIDGAGEIRQFVSITVPLIRGALSFVVVISIIHAFQAFDLVYVLTGANGG 241
Query: 248 LFEDKFIL-LYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
++L + F+ AF +G A+A+ + +L + + ++IT
Sbjct: 242 PETATYVLGIMLFQHAFSFL-EFGYASALAWVMFAILLVLTVLQLRIT 288
>gb|AAD33665.1|AF135398_2 (AF135398) putative integral membrane protein [Thermus brockianus]
Length = 280
Score = 123 bits (307), Expect = 2e-27
Identities = 85/291 (29%), Positives = 143/291 (48%), Gaps = 21/291 (7%)
Query: 11 IAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSD 70
IA + + P F F WPI YS+YL+F N ++ + +E VG+ N+ +L D
Sbjct: 3 IAPFLFLTPYALLFAVFWAWPIAYSLYLSFLNTRVYPWRLE-------VGV-NWGRLLQD 54
Query: 71 EKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT 130
F +A K T + V L + + + L+L NS +R K +R P + +
Sbjct: 55 PFFWTALKNTLFILLVQVPLMLALAL-LALALNSALLRAKGFFRFAFFAPVVVGAVAYSA 113
Query: 131 VWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
V++ +F+ FG +N LL+++G +W+ P A + I W + ++ A LQ
Sbjct: 114 VFRLLFNTEFGAVNALLRTLGHPGY-DWLYAPGPAMAVIIIALTWRWTGYNAIILLAGLQ 172
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY------ 244
S+P L EAA +DGA WQRF HV LP + + FA IL+ + Q F P+L
Sbjct: 173 SIPKELYEAAALDGAGPWQRFWHVTLPGIRPVLLFALILSIIGTLQLFTEPFLITGGGPG 232
Query: 245 NAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
NA + ++ GFR ++G A+A+ ++ A++ ++ +++ R
Sbjct: 233 NATMTLGVYLYQQGFRSF-----NFGYASAIAYTVALLAALFSFLQMRLWR 278
>gb|AAD51828.1|AF175299_3 (AF175299) ThuF [Sinorhizobium meliloti]
Length = 328
Score = 123 bits (307), Expect = 2e-27
Identities = 87/302 (28%), Positives = 151/302 (49%), Gaps = 15/302 (4%)
Query: 1 MGEDEMKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFP----VEKAGTL 56
+G D + +A + + P WP+I +IY +FTNA L N V A L
Sbjct: 19 IGSDLQAQRVRSAWLFLAPTFLVLALVAGWPLIRTIYFSFTNASLTNLSGAEFVGFANYL 78
Query: 57 KFVGLEN----FKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMI 112
++ L++ ++ +L+D + +A T F SV+++ +G+ ++L+ N+++ G+ +
Sbjct: 79 SWITLKSGRTIYRGLLADPAWWNAVWNTLKFTVLSVSIETALGLIVALVLNAQFP-GRGL 137
Query: 113 YRALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSIG-ISNPPNWINDPFWAFLALNI 171
RA ++IPWA+P + S +W +M + FG +N +L +G I W P A +A I
Sbjct: 138 VRAAILIPWAIPTIVSAKMWAWMLNDQFGILNDMLIGLGLIGEKIAWTASPDTAMIAELI 197
Query: 172 IEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTS 231
++VW PFM +I A LQ VP + EAA IDG + + F V LP + + A I
Sbjct: 198 VDVWKTTPFMALLILAGLQMVPGDIYEAAKIDGVHPVRVFWRVTLPLIRPALMVAVIFRM 257
Query: 232 AASFQYFMVPYLYNAGLFEDKFILLYGFRKAFGATPH-YGRATAVM---VIATMVLAIYM 287
+ + F + Y+ + K + + F YG A + M +IAT+ + +YM
Sbjct: 258 LDALRIFDLIYVLTPNNAQTKTMSVMARENLFDFDKFAYGAAASTMLFLIIATITI-LYM 316
Query: 288 YI 289
++
Sbjct: 317 WL 318
>emb|CAB94618.1| (AL359214) putative sugar transporter integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 328
Score = 123 bits (307), Expect = 2e-27
Identities = 82/292 (28%), Positives = 146/292 (49%), Gaps = 16/292 (5%)
Query: 11 IAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSD 70
+A +L+LP A + WP++ L+F N + ++ G +N+K +L+
Sbjct: 37 LAPYLLLLPAAAATVLLLGWPLVKDGLLSFQNLNMAQLIQH---VTEWTGFDNYKEVLTG 93
Query: 71 EKFRSAFKWTWIFVATSVTLKVLVG--IGLSLLYNSKYVRGKMIYRALLIIPWALPLLFS 128
E F + IF A +V L ++VG IGL L + +R + L++ WA+P++ +
Sbjct: 94 EDFWRVTVRSIIFTAVNVVLTMVVGGLIGLLLARLGRVMR--FVLMIGLVLAWAMPVVAA 151
Query: 129 ITVWKFMFDPVFGPINQLLKSIGISNPPN--WINDPFWAFLALNIIEVWLAYPFMMTVIT 186
TV++++F FG +N +L +G + + W F F + ++ VW++ PF+ +
Sbjct: 152 TTVYQWLFAQRFGVVNWVLDKLGWHSMADFSWTGSQFSTFFVVTVLIVWMSVPFVAINLY 211
Query: 187 AALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNA 246
AA ++PD L EAA +DGA W+ F V LP + + T L F+ F+ Y +N
Sbjct: 212 AATTTIPDELYEAAALDGAGMWRSFTSVTLPFLRPFLYATTFLEVIWIFKAFVQVYTFNG 271
Query: 247 GLFE--DKFILLYGFRKAFGATPHYGRATAVMVIATMVL----AIYMYINVK 292
G + + + +Y + + G HYG A+ V+ ++L A Y+ I +K
Sbjct: 272 GGPDRLTEILPVYAYIEGVG-NQHYGMGAAIAVLTILILLGLTAYYLRIVLK 322
>pir||B71369 probable sugar ABC transporter, permease protein (y4oQ) - syphilis
spirochete >gi|3322334|gb|AAC65070.1| (AE001192) sugar
ABC transporter, permease protein (y4oQ) [Treponema
pallidum]
Length = 296
Score = 123 bits (305), Expect = 3e-27
Identities = 80/296 (27%), Positives = 148/296 (49%), Gaps = 8/296 (2%)
Query: 1 MGEDEMK-KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFV 59
MG+ K + T++A P + +F + P + ++F QL + FV
Sbjct: 1 MGKSMSKPRDTVSAYCFSAPALVLLMFVLVLPAFLGLRMSFFQWQLSALRTQPV----FV 56
Query: 60 GLENFKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLII 119
G EN++ + S F ++ + T +F + V L+V++G+ L+L+ V G +R + ++
Sbjct: 57 GFENYRELFSSIHFWASVRTTLVFTLSVVVLEVVLGLALALVLEHG-VPGLRFFRTVFVL 115
Query: 120 PWALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYP 179
P + + +W F++ P FG IN L++ + P W+ +P A L++ + +VW P
Sbjct: 116 PMMIAPVVVGVLWGFLYHPQFGKINYALQAFELG-PVLWLANPRLALLSVILTDVWQWTP 174
Query: 180 FMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQ-YF 238
F+ V+ A LQ +P L+ AA +DGANY Q H+ +P ++ + AT+L SF+
Sbjct: 175 FVFLVLLAGLQGIPQHLLYAAKVDGANYMQTLLHIKIPHIAPVLGIATVLRLIDSFRGLV 234
Query: 239 MVPYLYNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
++ L N G IL ++ G+A+AV V+ ++ ++ I + +T
Sbjct: 235 VIMTLTNGGPGVATEILPLHLQRIAFEDHRLGKASAVAVLLFLLTSLLTCIFILLT 290
>sp|O58968|YC15_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1215
>gi|7442715|pir||A71065 probable sugar-binding transport
system permease protein - Pyrococcus horikoshii
>gi|3257632|dbj|BAA30315.1| (AP000005) 292aa long
hypothetical sugar-binding transport system permease
protein [Pyrococcus horikoshii]
Length = 292
Score = 122 bits (303), Expect = 6e-27
Identities = 78/285 (27%), Positives = 153/285 (53%), Gaps = 13/285 (4%)
Query: 14 LVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKF 73
++ ++P + F + ++++IY++FT+ + G P + FVGL +K ++ D F
Sbjct: 11 ILFLIPALILIGIFVYFAVVWNIYISFTDWR-GLIP-----SYHFVGLAQYKQLIHDPIF 64
Query: 74 RSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWK 133
++ + + + V +L+G+ L++L + K VR + +R + ++P+AL + + T+W
Sbjct: 65 WTSLRNNLLLILLFVPGSLLLGLFLAILLDMK-VRFESGFRTIYVLPFALSFVVTATLWA 123
Query: 134 FMFDPVFGPINQLLKSIGISN-PPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSV 192
+M+DP G +N L +G+ WI DP A + I +W + M + A ++S+
Sbjct: 124 WMYDPSSGVLNVLFDKLGLDFLKSGWITDPKIAMYCIIIALIWQFSGYTMIIYLAGIRSI 183
Query: 193 PDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYF-MVPYLYNAGLFED 251
P E A+IDGA+ WQ +R++++P ++KP A ++ S + F + L G
Sbjct: 184 PIEQYEGALIDGASTWQLYRYIVIPQLTKPTLSAFVVLMVFSLKAFDFIWVLTRGGPGTS 243
Query: 252 KFIL-LYGFRKAFGATPH-YGR--ATAVMVIATMVLAIYMYINVK 292
FIL + +++ F T YG AT ++++A +V+ Y+Y + K
Sbjct: 244 TFILAIEMYKETFAKTNFAYGAAIATILLLMALVVVLPYLYWSYK 288
>pir||T35790 probable transmembrane sugar transport protein - Streptomyces
coelicolor >gi|3288623|emb|CAA19795.1| (AL031013)
putative transmembrane sugar transport protein
[Streptomyces coelicolor A3(2)]
Length = 342
Score = 120 bits (298), Expect = 2e-26
Identities = 79/304 (25%), Positives = 149/304 (48%), Gaps = 24/304 (7%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILS----- 69
+L+LP + L +L P++ I ++F +L F + T + GL+NF +
Sbjct: 41 LLLLPALLLELLVHLVPMVIGIVMSFK--ELTQFYIRDWTTAPWAGLDNFTMSVDFDAPV 98
Query: 70 DEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSI 129
E +F T F SV L L+G ++ + RG+ + RA+ ++P+ALP+ ++
Sbjct: 99 GEALLHSFLVTCAFTILSVGLCWLIGTAAAICMQDAF-RGRGLLRAIFLVPYALPVYAAV 157
Query: 130 TVWKFMFDPVFGPINQLLKS-IGISNPPNWINDPFW-----AFLALNIIEVWLAYPFMMT 183
W FMF G +N +L +G+++ P+ FW +F+AL ++ VW +PF
Sbjct: 158 ITWAFMFQHDNGLVNHVLHDQLGLTDKPS-----FWLIGDNSFVALLVVSVWKGWPFAFL 212
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPY- 242
++ A LQ++P L EAA +DGA WQ+ R + LP++ ++ +F F P+
Sbjct: 213 IVMAGLQNIPKELYEAAALDGAGVWQQIRRITLPSLRPVNQVLVLVLFLWTFNDFNTPFV 272
Query: 243 LYNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVI----ATMVLAIYMYINVKITRLQE 298
L+ E ++ ++ T ++G +A+ V+ +V +Y+++ + R
Sbjct: 273 LFGKAAPEAADLISIHIYQSSFVTWNFGAGSAMSVLLLLFLLLVTGVYLFVTSRTARAPR 332
Query: 299 GAKE 302
++E
Sbjct: 333 NSRE 336
>pir||G72379 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4980937|gb|AAD35516.1|AE001721_15
(AE001721) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 286
Score = 120 bits (298), Expect = 2e-26
Identities = 84/288 (29%), Positives = 136/288 (47%), Gaps = 26/288 (9%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+ +LPG+ + F P+I + F L + P +FVGLENFK +L D
Sbjct: 11 IFVLPGLVFLVLFVAVPVISVFIMGFFKWNLLSPP-------RFVGLENFKMLLKD---- 59
Query: 75 SAFKWTWIFVATSVTLKVL-------VGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLF 127
KW W V S+ L +L V +GL+L + K++ RA P+ +P +
Sbjct: 60 ---KWFWNSVWVSIKLLLLAVPMQFFVSLGLALCLYEETTASKIL-RAFFYWPYMMPAVA 115
Query: 128 SITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITA 187
T+WK++ G +N +L+++G+ P W+ PF A ++ ++ W +M +
Sbjct: 116 GTTMWKWLLSYDIGLLNHILRTLGLPPVP-WLIKPFPALFSIALLRTWGMTGLLMVMFIT 174
Query: 188 ALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
LQ+VP IEAA+IDGAN WQRF +V+ P +S + A + + F Y+ G
Sbjct: 175 GLQNVPQDYIEAAMIDGANRWQRFWYVVFPAMSNTNLLVLMTAIAHTLRSFAGVYVLTTG 234
Query: 248 --LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKI 293
+ I LY ++ AF G + A VI ++ I +K+
Sbjct: 235 GPGYATTIIPLYIYQTAF-TQFRIGYSYAASVIYFLIAFAIAMITLKL 281
>sp|Q9Z3R6|AGLF_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE PROTEIN AGLF
>gi|4210906|gb|AAD12049.1| (AF045609) AglF
[Sinorhizobium meliloti]
Length = 290
Score = 119 bits (295), Expect = 5e-26
Identities = 71/296 (23%), Positives = 141/296 (46%), Gaps = 19/296 (6%)
Query: 10 TIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILS 69
+I + + P + A + ++P++ S++L+ + G FVGL N+ W+++
Sbjct: 6 SIRPWLFLAPALLALTLYLVYPVVQSVWLS----------LHGRGGQNFVGLSNYSWMIN 55
Query: 70 DEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSI 129
D +FR + ++++ L G+ ++ L + + I + L+ +P A+ + +
Sbjct: 56 DGEFRQSIFNNFLWLLVVPALSTFFGLIIAAL--TDRIWWGNIAKTLIFMPMAISFVGAA 113
Query: 130 TVWKFMFD------PVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMT 183
+WKF++D G +N ++ ++G P WI PFW L +I +W+ F M
Sbjct: 114 VIWKFIYDYRAAGSEQIGLLNAIVVALG-GEPQAWITLPFWNNFFLMVILIWIQTGFAMV 172
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
+++AAL+ +P+ IEAA+IDGAN WQ F +++P + IA + + F +
Sbjct: 173 ILSAALRGIPEETIEAAVIDGANGWQIFFKIMVPQIWGTIAVVWTTITILVLKVFDIVLA 232
Query: 244 YNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEG 299
G ++ + + F F +GR A+ V+ + M N++ + G
Sbjct: 233 MTNGQWQSQVLANLMFDWMFRGGGDFGRGAAIAVVIMNPVVPIMIWNIRNATRESG 288
>emb|CAB95276.1| (AL359779) putative sugar transport integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 321
Score = 119 bits (295), Expect = 5e-26
Identities = 58/213 (27%), Positives = 112/213 (52%), Gaps = 4/213 (1%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+ P + L F +P++ ++ ++F + F G F G +N+ + D F A
Sbjct: 42 VAPAVVFMLLFFGYPLVRNVVMSFQDYTPKTF---FTGEAPFNGADNWSNVFQDALFGKA 98
Query: 77 FKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMF 136
T +F A S+ + +G+ L++ ++ ++ ++ R+L+++PW +P++ S VW+ +
Sbjct: 99 LWHTLVFTAGSLLGQFCIGLALAVFFSRRFPLNGVL-RSLILLPWLVPMVVSGIVWRRIL 157
Query: 137 DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTL 196
D G +N L ++GI W+ P A L++ ++ +W+ PF M ++ LQ +P L
Sbjct: 158 DQDTGVLNSFLDTLGIGGHTPWLTSPEMALLSVILVNIWIGIPFNMVILYGGLQEIPKEL 217
Query: 197 IEAAIIDGANYWQRFRHVILPTVSKPIAFATIL 229
EAA +DGA+ W+ FR V LP + + +L
Sbjct: 218 HEAAALDGASAWRTFRSVTLPMLKPVVTVVLVL 250
>emb|CAC10105.1| (AL442165) putative cellobiose transport permease [Streptomyces
coelicolor]
Length = 337
Score = 119 bits (295), Expect = 5e-26
Identities = 82/287 (28%), Positives = 155/287 (53%), Gaps = 17/287 (5%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+ P FL F L+P+IY+ + + +L P + +++ GL+N+ I DE F +A
Sbjct: 54 VSPFFLLFLAFGLFPLIYTGWASLHTVEL-TAPTD----MQWTGLDNYTRIFDDEFFWNA 108
Query: 77 FKWT-WIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFM 135
K T WI V ++V ++L+ +GL+ + N K +R YR +++ P+A + + V+ +
Sbjct: 109 AKNTLWIGVISTVP-QLLMAMGLAHILNYK-LRASTFYRVVMLAPYATSIAAASLVFVLL 166
Query: 136 FDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDT 195
F +G IN +L +G+ +W N + + A++ I +W + + AA+Q++P
Sbjct: 167 FGRDYGMINWVLDLVGLDKI-DWQNGSWSSKFAVSTIVIWRWTGYNALIYLAAMQAIPQD 225
Query: 196 LIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNA-----GLFE 250
L E+A +DGA+ W++F HV LP++ I F ++++ + Q F P L++A G +
Sbjct: 226 LYESAALDGASRWRQFIHVTLPSLRPTILFTVVVSTIGASQVFGEPLLFDANKGASGGSQ 285
Query: 251 DKF--ILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+F + LY + + + H GRA+A+ ++L + +N I+R
Sbjct: 286 HQFQTLGLYLYEQGW-VNQHLGRASAIAWAMFLILIVIGVLNAVISR 331
>emb|CAB55533.1| (AL117322) putative binding-protein-dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 317
Score = 118 bits (294), Expect = 6e-26
Identities = 71/286 (24%), Positives = 139/286 (47%), Gaps = 13/286 (4%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
AA + + P + F F +P + IY + T+ L T FVG +N+ ++ DE
Sbjct: 36 AAWLFLAPALLGFALFYAYPTVRGIYYSLTDYSL-------IATPDFVGGDNYSRLIGDE 88
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
+F +A + T +V ++ + L+ + L+ L + + + RA+L++PW +P + +
Sbjct: 89 QFWNALQVTGYYVLVNIVSQTLLALVLATLMHR--LTRSVALRAMLLVPWLVPNVTVGLL 146
Query: 132 WKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191
W ++ D G +N +L S+G+ + P WA ++ + W + ++ A +
Sbjct: 147 WMWLLDTNLGLVNHVLNSMGMGTT-GFFTSPDWAMPSVAAVNTWAYTGYTALLLYAGMLQ 205
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--LF 249
VP L E+A +DGA W+ F + LP + ++ +++ SFQ F + G +
Sbjct: 206 VPQYLYESASLDGAGEWRMFTRITLPLLRPVLSLVLVVSLIGSFQIFDTIAVTTKGGPVS 265
Query: 250 EDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+ I Y + +AF H G A+AV V+ ++L + + +++ R
Sbjct: 266 ATRVIYYYIYEQAF-TNFHMGYASAVAVVLALILGVLTAVQMRLLR 310
>emb|CAB71197.1| (AL138538) putative sugar transport system permease protein
[Streptomyces coelicolor A3(2)]
Length = 314
Score = 118 bits (294), Expect = 6e-26
Identities = 70/236 (29%), Positives = 117/236 (48%), Gaps = 11/236 (4%)
Query: 7 KKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKW 66
+ + + + P + F F +P++ ++Y + + G +F GLEN+ +
Sbjct: 11 RSSALRTAAFMSPWLVGFAVFFAYPLVSTVYFSLMK-------YDGFGVPQFRGLENWAY 63
Query: 67 ILSDEK-FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPL 125
+ D F A + T V VT +V+ G+G+ LL +K G ++R L +P+ P
Sbjct: 64 VFQDYPLFWPALRNTLWLVLVMVTCRVVFGLGVGLLI-TKIRTGAGVFRTLFYLPYLAPP 122
Query: 126 LFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVI 185
+ + + F+ +P GP+N +L+ +G+ P W D W+ AL + VW +M +
Sbjct: 123 VAATLAFVFLLNPGTGPVNSVLEGLGVP-APGWFTDSAWSKPALTALAVW-GVGDLMVIF 180
Query: 186 TAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVP 241
AAL VP EAA +DGA+ WQRFR V LP +S + FA + + QY+ P
Sbjct: 181 MAALLDVPKEQYEAAELDGASAWQRFRFVTLPNISPIVLFAVVTGVIQTMQYYTQP 236
>dbj|BAB05644.1| (AP001513) sugar transport system (permease) [Bacillus halodurans]
Length = 305
Score = 118 bits (294), Expect = 6e-26
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 12/293 (4%)
Query: 5 EMKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENF 64
E ++T ++A I P F F L+P+I+S YL+F F + + +VGL NF
Sbjct: 12 EERRTALSAYAFISPFFILFAVFGLFPMIFSFYLSF-------FRWDGLNPMSYVGLANF 64
Query: 65 KWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALP 124
+ I +D F SA K T+I +++VGI L+ NS +R + +R L+ +P+
Sbjct: 65 QLIFNDPTFFSAIKNTFIIGILGTLPQIIVGILLAFALNSALIRFQHTFRTLVFLPYITS 124
Query: 125 LLFSITVWKFMF-DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMT 183
++ ++ +F + FG N +L I +P W + + +A+ + W +
Sbjct: 125 IVAVAIIFGLVFNNQPFGLANYVLSLFNI-DPVRWSQEYWPVKIAIATMVFWRWVGYNTI 183
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
+ A +QS+P L EAA IDGA Q+ R + +P + I F + S Q F P +
Sbjct: 184 IFLAGMQSIPKELYEAAKIDGATIGQQIRLITVPMLKPFILFVVFTATIGSLQLFTEPLI 243
Query: 244 Y-NAGLFEDKFILL-YGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
+ GL E+ ++ Y +R AF +G A+A ++ ++ IN+ IT
Sbjct: 244 FLGRGLREEGITMVAYLWRDAF-VLNAFGTASAAAIVLFFIIITLTAINLLIT 295
>emb|CAA91221.1| (Z56279) integral membrane protein [Thermoanaerobacter brockii]
Length = 303
Score = 117 bits (290), Expect = 2e-25
Identities = 79/298 (26%), Positives = 141/298 (46%), Gaps = 28/298 (9%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+ LP I FL FNL+P+IY+ YL+ T+ L N + FVGL NFK + SD F
Sbjct: 20 IFTLPFIVIFLVFNLYPLIYTFYLSLTDMTLMN------SSYHFVGLANFKQLFSDNYFL 73
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMI-------YRALLIIPWALPLLF 127
+ TW + ++ + + L++ + + ++ K I Y +++P A+ LF
Sbjct: 74 KSVINTWKIWLINFIPQLTIAMLLAIWFVNNRLKIKFIGLWRTIYYLPNILMPVAVAALF 133
Query: 128 SITVWKFMFDPVFGPINQLLKSIGISNPP-NWINDPFWAFLALNIIEVWLAYPFMMTVIT 186
+ F ++GP+NQ+ GI ++ W L + I+ W+ Y + ++
Sbjct: 134 ------YNFFSLYGPVNQIAVRTGILKEAFDFFRSTTWTQLIVAFIQWWMWYGVTIILLM 187
Query: 187 AALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYN- 245
A L S+ + E+A++DGAN WQ F + LP + + + + + + Q F +PYL
Sbjct: 188 AGLSSISPSYYESALVDGANSWQMFTKITLPLLKPVLIYVLVTSLSGGMQMFDIPYLLTD 247
Query: 246 -----AGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQE 298
G +L+Y K + G A +V V+ ++ AI +I + + + +E
Sbjct: 248 GTGSPDGAIRTMSVLMY--MKFSSGDGYIGAAASVGVMIFLITAIAAFIIINLLKERE 303
>emb|CAB72191.1| (AL138851) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 316
Score = 116 bits (289), Expect = 2e-25
Identities = 78/291 (26%), Positives = 144/291 (48%), Gaps = 18/291 (6%)
Query: 11 IAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQL-GNFPVEKAGTLKFVGLENFKWILS 69
+A +++L G+ + + L I + L +T AQ+ G P F G N+ +
Sbjct: 36 LAPALVVLGGLLVYPVYQLGLISF---LEYTQAQVSGGEPAT------FQGFGNYAELFG 86
Query: 70 DEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSI 129
D +F T +F A V + VG L++L ++ + WA P +
Sbjct: 87 DGEFWRVLLATVVFAAACVVSTLAVGCALAVLLTRVRAVPRLALMLAGLGAWATPAVTGS 146
Query: 130 TVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAAL 189
TVW +FDP FGP+N++L G+ + +W + AFL + + VW ++PF+M + A +
Sbjct: 147 TVWLLLFDPDFGPVNRML---GLGDH-SWTYGRYSAFLLVLLEVVWCSFPFVMVTVYAGI 202
Query: 190 QSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG-- 247
++VP ++EAA +DGA+ W+ +R V+ P + + TI + F+ F Y+ G
Sbjct: 203 RAVPSEVLEAAALDGASQWRIWRSVLAPMLRPILVVVTIQSVIWDFKVFTQIYVMTNGGG 262
Query: 248 -LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQ 297
++ + +Y ++KAF A+ Y +A+ V+ ++L + +++ R Q
Sbjct: 263 IAGQNMVLNVYAYQKAF-ASSQYSLGSAIGVVMLLILLAVTLVYLRLLRRQ 312
>dbj|BAB06444.1| (AP001516) lactose transport system (permease) [Bacillus
halodurans]
Length = 290
Score = 115 bits (286), Expect = 5e-25
Identities = 72/276 (26%), Positives = 140/276 (50%), Gaps = 12/276 (4%)
Query: 21 ITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFKWT 80
+ A F +P++ ++ L+F + N L++VGL N+ + +D F +A K T
Sbjct: 19 VAAITIFYFYPMLQALLLSFQSGMGAN--------LEYVGLANYIRLFNDPTFLTALKNT 70
Query: 81 WIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDPVF 140
+++ V L +++ + S+L N ++ + +R + +P L+ ++K++F +
Sbjct: 71 LLYLLIQVPLMIVLALIFSVLLNDATLKFRSFFRIAIFLPCVTSLVAYSVIFKYLFG-MD 129
Query: 141 GPINQLLKSIG-ISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIEA 199
G +NQ L ++ IS P W++DPFWA + + + W + M ++LQ+V ++ EA
Sbjct: 130 GLVNQFLLNVSLISAPIQWLSDPFWAKVTIIVAITWRWTGYNMIFYLSSLQNVDQSIYEA 189
Query: 200 AIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYF-MVPYLYNAGLFEDKF-ILLY 257
A IDGA +Q+F + +P + I F +I ++ + Q F V + N G I Y
Sbjct: 190 AKIDGATPFQQFTKITIPMLKPIILFTSITSTIGTLQIFDEVVNITNGGPGNATLSISQY 249
Query: 258 GFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKI 293
+ +F TP +G A+ V + M++ + + K+
Sbjct: 250 IYNLSFEYTPDFGYASTVSYVIVMLVIVLSIVQFKV 285
>sp|O31519|YESP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN YESP
>gi|7442702|pir||G69796 lactose permease homolog yesP -
Bacillus subtilis >gi|2633011|emb|CAB12517.1| (Z99107)
similar to lactose permease [Bacillus subtilis]
Length = 309
Score = 115 bits (285), Expect = 7e-25
Identities = 88/303 (29%), Positives = 152/303 (50%), Gaps = 23/303 (7%)
Query: 2 GEDEMKKT------TIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGT 55
G D MKK+ +A I P I FL F + P+ S++L+FT+ L P
Sbjct: 5 GADAMKKSRSIRKDNLAGYAFISPFIIGFLCFTVIPMGASLFLSFTSYDLFTAP------ 58
Query: 56 LKFVGLENFKWILS-DEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYR 114
K++GL+NFK + + DEK+ + K T+ +V V L++ + ++++ N+ +G IYR
Sbjct: 59 -KWIGLDNFKEMFTGDEKYWQSLKVTFTYVLAGVPLRLGFALFIAVILNNA-AKGTAIYR 116
Query: 115 ALLIIPWALPLLFSITV-WKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIE 173
L +P + ++ + W+ +F G IN LL +GI W +P A L ++
Sbjct: 117 TLFYLPSIIGGSVAVAIMWRNIFGND-GVINALLFFVGIDQKILWYQNPTSALWTLILLS 175
Query: 174 VWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAA 233
VW + M + A L+++P + +EAA +DGAN QRF + LP ++ I F ++ + +
Sbjct: 176 VW-QFGSSMLIFLAGLKNIPSSYLEAASVDGANRVQRFFKITLPILTPIIFFNLVMQTIS 234
Query: 234 SFQYFMVPYLYNAG----LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYI 289
+F F Y+ + G L LY F++AF G A+A+ + +++ + I
Sbjct: 235 AFMTFTPAYIISKGEGGPLDGTLLYSLYLFQRAFNYF-QMGYASAMAWVMLVIVGLITLI 293
Query: 290 NVK 292
K
Sbjct: 294 LFK 296
>emb|CAB86098.1| (AL163003) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 313
Score = 115 bits (284), Expect = 9e-25
Identities = 66/222 (29%), Positives = 109/222 (48%), Gaps = 12/222 (5%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+ P + F F +WP++ +YL+FT+A + + F+GL+N++ L D A
Sbjct: 37 VAPFLALFALFVVWPLLRGLYLSFTDANISG------DSANFIGLDNYREALKDPLMWDA 90
Query: 77 FKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMF 136
+ F V ++ + L++L + RGK ++R +P+ LP + +W+++F
Sbjct: 91 LGHSAYFTLLVVPCITVLALLLAMLAHH-IERGKWLWRLCFFLPFLLPSTVAANLWQWLF 149
Query: 137 DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTL 196
+P G +N + G+ P W+ D +A LA+ I +W F + AALQ +P L
Sbjct: 150 NPGTGMVNHVF---GLETP--WLTDKSYAMLAVVITTLWWTVGFSFLLYLAALQGIPAHL 204
Query: 197 IEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYF 238
EAA +DGAN W R H+ LP + L AS Q F
Sbjct: 205 YEAAKLDGANAWHRILHITLPMLRNITGLVVALQILASLQVF 246
>pir||S63615 malF protein homolog cymF - Klebsiella oxytoca
>gi|854233|emb|CAA60005.1| (X86014) cymF [Klebsiella
oxytoca]
Length = 427
Score = 114 bits (282), Expect = 2e-24
Identities = 69/241 (28%), Positives = 127/241 (52%), Gaps = 11/241 (4%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
A +++ P A + F + P+I ++ ++ TN + + + +VGL+NF +
Sbjct: 128 ATIMLAPAFIACIAFIIMPMIITVLVSLTNYSAPHH-IPPKNLVDWVGLKNFITLFELRI 186
Query: 73 FRSAFK----WT--WIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLL 126
+ F WT W F AT T G L+L +K + K +R + I+P+A+P
Sbjct: 187 WSKTFVGIGVWTVLWAFFATLCTCSF--GFLLALALENKKIIAKKAWRVVFILPYAIPAF 244
Query: 127 FSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVIT 186
++ +++ + + + GP+N L S GI + +++DP A + + + VW+ P+ M +IT
Sbjct: 245 VTLLIFRLLLNGI-GPVNSTLNSWGIDSI-GFLSDPLIAKMTVIAVSVWVGAPYFMLLIT 302
Query: 187 AALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNA 246
A+ ++P L EA+ +DGA+ +Q+FR + LP V +A + ++T A +F F YL
Sbjct: 303 GAMTNIPRDLYEASEVDGASKFQQFREITLPMVLHQVAPSLVMTFAHNFNNFGAIYLLTE 362
Query: 247 G 247
G
Sbjct: 363 G 363
>sp|P77653|YCJO_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YCJO
>gi|7442722|pir||B64880 probable multiple sugar
transport protein b1311 precursor - Escherichia coli
>gi|1742149|dbj|BAA14887.1| (D90769)
Sn-glycerol-3-phosphate transport system permease
protein UgpA. [Escherichia coli]
>gi|1787570|gb|AAC74393.1| (AE000229) putative
binding-protein dependent transport protein [Escherichia
coli K12]
Length = 293
Score = 113 bits (281), Expect = 2e-24
Identities = 81/285 (28%), Positives = 142/285 (49%), Gaps = 16/285 (5%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
AL+L+ P + WP++ +I ++F L N +E FVG+ N+ ILSD
Sbjct: 14 ALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPL-NPNIEST----FVGVSNYVRILSDPG 68
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
F + T + A V ++G+ +++ +N ++ R + R+L+I+ + P + + W
Sbjct: 69 FWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREF-RLRKTARSLVILSYVTPSISLVFAW 127
Query: 133 KFMFDPVFGPINQLLKSIG--ISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
K+MF+ +G +N L + P W ++P +F+ + + +W +P+ A LQ
Sbjct: 128 KYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQ 187
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFE 250
++ +L EAA +DGAN WQRFR V LP + +A L + F F YL +
Sbjct: 188 TIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTTKV-- 245
Query: 251 DKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+ +Y ++ AF A G+A A+ V VL I ++ + +TR
Sbjct: 246 -DILGVYLYKTAF-AFNDLGKAAAISV----VLFIIIFAVILLTR 284
>dbj|BAB04964.1| (AP001511) unknown conserved protein in others [Bacillus
halodurans]
Length = 445
Score = 113 bits (280), Expect = 3e-24
Identities = 63/238 (26%), Positives = 127/238 (52%), Gaps = 5/238 (2%)
Query: 58 FVGLENFKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALL 117
F+G ++ + D + +A T F SV ++++G+ ++LL N + +G+ + R +
Sbjct: 196 FIGFSHYVNYVQDSRMWAAMSNTLFFTVVSVAAELVLGLAIALLINRTF-KGRGLVRVAV 254
Query: 118 IIPWALPLLFSITVWKFMFDPVFGPINQLLKSIG-ISNPPNWINDPFWAFLALNIIEVWL 176
+IPWA+P + +W++++D FG I + +G IS+ ++ A ++ +VW
Sbjct: 255 LIPWAIPTAVAAMMWRYLYDGQFGVIAHYFEQLGLISDSSVLLSTGAGAMFSIIFADVWK 314
Query: 177 AYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQ 236
P+M ++ A LQ++P++L EAA +DGAN Q F + LP + I A + + +F+
Sbjct: 315 TTPYMALLLLAGLQTIPNSLYEAAKVDGANRIQTFFKITLPLLKSAILVALLFRTLDAFR 374
Query: 237 YFMVPYLYNAG--LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVK 292
F + ++ G + I +Y +R F + ++G +A+ VI + +A+ + +K
Sbjct: 375 VFDLIFVLTGGGPANSTESISIYAYRTLF-SQQNFGAGSALSVIVFLSVALISFAFIK 431
>pir||T46603 permease cebF [imported] - Streptomyces reticuli
>gi|5327252|emb|CAB46343.1| (AJ009797) CEBF protein
[Streptomyces reticuli]
Length = 306
Score = 112 bits (277), Expect = 6e-24
Identities = 76/286 (26%), Positives = 147/286 (50%), Gaps = 15/286 (5%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+ P F F+L P++Y+ + + N QL + + GL+N++ +LS + F +A
Sbjct: 23 VAPFFLLFGAFSLVPLLYTAWYSLHNVQLSALDHKT-----WAGLDNYENLLSSDFFWNA 77
Query: 77 FKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMF 136
K T S ++L + L+ L N K +RG +R +++ P+A + + V+ ++
Sbjct: 78 LKNTLTIGIISTVPQLLAALALAHLLNYK-LRGSTAWRVVMLTPYATSVAAATLVFTLLY 136
Query: 137 DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTL 196
G +N +L G+ +P NW + + A++ I +W + + AA+Q++P L
Sbjct: 137 SWDGGMVNWILDFFGV-DPVNWRESDWGSQFAVSSIVIWRWTGYNALIYLAAMQAIPADL 195
Query: 197 IEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY-----NAGLFED 251
E+A +DGAN WQ+FRHV +P + I F ++++ + Q F P L+ + G E
Sbjct: 196 YESAALDGANRWQQFRHVTVPQLRPTILFTVVVSTIGATQLFGEPLLFGGVSGSKGGSEH 255
Query: 252 KF--ILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
++ + LY + + + + G+A+A+ ++L I +N+ +TR
Sbjct: 256 QYQTLGLYMYDQGW-IIGNLGKASAIAWSMFLILLIVAAVNLLLTR 300
>emb|CAB88145.1| (AL352956) putative binding protein dependent transport protein
(fragment). [Streptomyces coelicolor A3(2)]
Length = 288
Score = 112 bits (277), Expect = 6e-24
Identities = 64/240 (26%), Positives = 120/240 (49%), Gaps = 10/240 (4%)
Query: 8 KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWI 67
K + A ++ + F FF+ +P++ +LAF G + +VGLEN + +
Sbjct: 36 KRNLTAHGFLIGAVLCFAFFSWYPMVREFFLAFQKTDQGE--------VSWVGLENLETV 87
Query: 68 LSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLF 127
+D F A++ T +F ++ L V ++++ N + GK R L+ +P LP +
Sbjct: 88 FNDPAFWQAWRNTALFTVLALVLGFAVPFVVAIVIN-ELRHGKGYLRLLVYLPVMLPPVA 146
Query: 128 SITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITA 187
S+ ++K+++DP +G +N++ G+ W+ DP + L++ I W+ + A
Sbjct: 147 SVLLFKYLYDPGYGMLNEVFGFFGLPEQ-QWLQDPDLSMLSVVIASTWMNMGGAALIYLA 205
Query: 188 ALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
ALQ +P L EAA +DGA ++ HV +P ++ ++ A+ Q F+ P+L G
Sbjct: 206 ALQGIPGELYEAAELDGAGLLRKIWHVTIPQTRLILSLMLLMQIIATMQVFVEPFLLTGG 265
>emb|CAC16436.1| (AL450165) putative sugar transport permease [Streptomyces
coelicolor]
Length = 331
Score = 111 bits (275), Expect = 1e-23
Identities = 62/236 (26%), Positives = 125/236 (52%), Gaps = 7/236 (2%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
A + P F F+ +P+IY+ +++ + +L V +++V +N+ + D
Sbjct: 42 APYAFVAPFFIVFAAFSFYPLIYTSWISLHDVELATLDV-----MEWVAFDNYVELWGDS 96
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
+F +A + T S ++++ +G++ L N + +R + +R ++P+A + + V
Sbjct: 97 RFWNAVQNTITIGVISTVPQLMMALGMAHLLNYR-MRASLFFRVASLVPYATSVAAAALV 155
Query: 132 WKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191
+ +F+ FG IN L S+GI +P +W D + A +A++ I +W + + AA+Q+
Sbjct: 156 FTMIFERDFGMINWALGSVGI-DPVDWEADKWPAQVAISTIVIWRWTGYNALLYLAAMQA 214
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
+P EAA +DGA+ W++F HV +P + I F +L++ + Q F P ++ G
Sbjct: 215 IPADRYEAASLDGASRWKQFIHVTIPGIRSTIVFTIVLSTIGATQLFGEPLIFGQG 270
>pir||S77536 lactose transport system permease protein lacF - Synechocystis sp.
(strain PCC 6803) >gi|1652461|dbj|BAA17383.1| (D90905)
lactose transport system permease protein LacF
[Synechocystis sp.]
Length = 298
Score = 109 bits (270), Expect = 4e-23
Identities = 75/281 (26%), Positives = 142/281 (49%), Gaps = 15/281 (5%)
Query: 16 LILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRS 75
L++ G T F +P + + L+FT +L + KA +VGL NF+ + D F
Sbjct: 24 LVMLGATVF-----YPALQAFSLSFTQYELD---LTKAPA--WVGLANFERLWRDRVFWL 73
Query: 76 AFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFM 135
F+ T +++ V L +++ +GL++L N K +RG +R P ++ + WK +
Sbjct: 74 TFRHTLLYLVGVVPLLIMLPLGLAILVNQK-LRGITWFRMAYYTPVITSIVVAGIAWKAL 132
Query: 136 FDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDT 195
+ G +NQ+L +G S+ W+ P A ++ ++ VW + M + A LQ++P
Sbjct: 133 YASN-GILNQILALLGFSDGIPWLTSPNLALWSVMVVTVWKGLGYYMVIYLAGLQAIPQE 191
Query: 196 LIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--LFEDKF 253
L EA IDGA+ W++ + +P + +L+S ++ + F Y+ G L K
Sbjct: 192 LYEAGAIDGADGWRQHWDITIPLMRPYCFLVGVLSSISALKVFEEVYIMTQGGPLNASKT 251
Query: 254 ILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
++ Y + +AF A+A+ ++ +V+ I+ IN+K++
Sbjct: 252 VVYYVYERAF-QDLEMNYASAIGLVLFLVIFIFSVINLKLS 291
>pir||D72331 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981341|gb|AAD35893.1|AE001748_9
(AE001748) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 300
Score = 109 bits (269), Expect = 5e-23
Identities = 77/292 (26%), Positives = 152/292 (51%), Gaps = 15/292 (5%)
Query: 7 KKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKW 66
K+ +A + +P + LF +P+++ I ++F + + G ++GL+N+
Sbjct: 12 KQLLLAFFFITIPTLLMVLFI-YYPLVFGIKISF-------YQYDIVGESLYIGLKNYVD 63
Query: 67 ILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLL 126
+L D F +AFK + +++ L+ L+ I L++L + + +RG+ ++R L+ +P P+
Sbjct: 64 LLRDPLFWNAFKNSLLYLLVVPPLQ-LISILLAVLLD-RAIRGRNLFRTLIFLPVVTPIT 121
Query: 127 FSITVWKFMFDPVFGPINQLLKSIGISNPP-NWINDPFWAFLALNIIEVWLAYPFMMTVI 185
+ W++M+ G IN LL+S+ I + P +++DP A A+ + +W + + M +
Sbjct: 122 IAAITWQWMYREK-GFINFLLQSLHIIDEPIAFLSDPKIALFAIMFVTMWKGFGYYMVIY 180
Query: 186 TAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYN 245
A LQS+P LIEAA +DGA Q F V +P + I F + ++S A+ F Y
Sbjct: 181 LAGLQSIPRELIEAARVDGAKPSQVFFKVTIPLLKPYILFCSTMSSIAALNVFGEIYAMT 240
Query: 246 AG--LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
G + + + ++ + +AF +G + A V+ + V+ + +N + R
Sbjct: 241 KGGPVHATETMGIFIYNRAFEYL-QFGYSNAAAVLFSFVVIAFSLLNFYLFR 291
>sp|P29823|LACF_AGRRD LACTOSE TRANSPORT SYSTEM PERMEASE PROTEIN LACF
>gi|72502|pir||MMAGCF membrane protein lacF -
Agrobacterium radiobacter >gi|38969|emb|CAA47162.1|
(X66596) lacF [Agrobacterium radiobacter]
Length = 298
Score = 109 bits (269), Expect = 5e-23
Identities = 75/286 (26%), Positives = 129/286 (44%), Gaps = 14/286 (4%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+ + P I F L+PI+ S+ L+ + LKF G N + +D F
Sbjct: 19 LFVAPAIALISVFMLYPILRSLVLSLYTG--------RGMMLKFSGTGNLVRLWNDPVFW 70
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
A + T IF V + + + + L+ + N+ +R ++R ++ +P L+ ++K
Sbjct: 71 QALQNTVIFFVVQVPIMITMALILAAMLNNPKLRYSGLFRTMIFLPCVSSLVAYSILFKS 130
Query: 135 MFDPVFGPINQLLKSIGISNPP-NWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVP 193
MF + G +N L +IGI P W+ DPFWA + + I W + M AALQ++
Sbjct: 131 MFS-LDGVVNNTLLAIGIIGEPIGWLTDPFWAKVLIIIAITWRWTGYNMIFYLAALQNID 189
Query: 194 DTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG----LF 249
++ EAA IDG W RF + +P + I F TI ++ + Q F Y + G
Sbjct: 190 RSIYEAAKIDGVPSWGRFAFLTIPMLKPVILFTTITSTIGTLQLFDEVYNFTEGTGGPAN 249
Query: 250 EDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+ LY + F P + A V + +++A+ ++ R
Sbjct: 250 STLTLSLYIYNLTFRFMPSFSYAATVSYVIVLMVAVLSFLQFYAAR 295
>pir||T47064 hypothetical protein [imported] - Yersinia pestis
>gi|4106652|emb|CAA21407.1| (AL031866) ORF82, len=286
aa, probable ABC transporter protein, similar to many,
eg: AE000089_2 Rhizobium sp., (309aa), 37.6% identity in
266 aa overlap, Fasta scores: opt:674, E(): 0, or
Thermococcus litoralis, O51924 inner membrane protein
MalF, 36.8>
Length = 286
Score = 108 bits (267), Expect = 9e-23
Identities = 68/280 (24%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 18 LPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAF 77
LP + L + + + Y+IYL+ + L + P F+G+ NF +L + + S+
Sbjct: 12 LPLLVVLLLVSFYTLGYAIYLSVHDIDLMSPP-----PFDFIGMANFIEVLQEPRMWSSL 66
Query: 78 KWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFD 137
T ++VA S ++++G ++L + + G+ + RALL++P + + + +W+ +D
Sbjct: 67 WNTLVYVAGSTVAELVLGSAIALFISRDFF-GRKLVRALLLLPMIVTPIVAGLIWRIFYD 125
Query: 138 PVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLI 197
P G N L IGI P +W+ +P A +L + ++W PF++ +++A L ++P +
Sbjct: 126 PNAGLFNWLAGLIGIP-PIDWLGNPSTAMASLILADIWQWTPFIILLVSAGLDALPSEPL 184
Query: 198 EAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--LFEDKFIL 255
EAA +DGA W+ + LP + I A L +F+ F + Y+ G +
Sbjct: 185 EAAELDGARGWRLLAFIKLPMMKPIILMALFLRMIDAFKSFDLIYVMTRGGPALATETTN 244
Query: 256 LYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+Y + F ++ +V+A+ + + K+ +
Sbjct: 245 MYAYLTGFQDFRISAAVVIAIINTLLVIAVLSFASKKVMK 284
>dbj|BAB07400.1| (AP001519) sugar ABC transporter (permease) [Bacillus halodurans]
Length = 293
Score = 108 bits (267), Expect = 9e-23
Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 13/288 (4%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+LP + L PI+ + Y G + G + F+GLEN+ +L D+ F S+
Sbjct: 15 VLPALLLILVLIYIPIVLTGYY-------GLMDWDGIGPMTFIGLENYANLLVDKMFWSS 67
Query: 77 FKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMF 136
+ + SV L +++ + +SL+ ++G ++R + +IP L + +W ++
Sbjct: 68 AYHSLLLAIFSV-LSLVIYLAISLVLTGN-IKGADLFRKIFLIPMLLSSVAIAQLWMRIY 125
Query: 137 DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTL 196
P G N+ L S+GI NPP W++D A+ I +W F + + AAL++VP+ L
Sbjct: 126 HPTNGVFNRFLTSLGIENPPLWLSDTNIVLFAIFIPILWQYAGFYILIYYAALRNVPNEL 185
Query: 197 IEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--LFEDKFI 254
+EAA IDGA Q V LP ++ I +L S +YF + Y+ G + +
Sbjct: 186 VEAAQIDGATPLQIAYKVKLPLIAGVIKVTVVLAVIGSLKYFDLIYVMTDGGPNGASEVM 245
Query: 255 LLYGFRKAFGATPHYGRATAV-MVIATMVLAIYMYINVKITRLQEGAK 301
Y ++ AF T +G +A+ + ++L I +I T ++G +
Sbjct: 246 ASYMYKLAF-RTNDFGYGSAIGFFLLILILIITYFIRKGTTSKEDGVQ 292
>sp|P37730|AMYD_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANSPORT SYSTEM PERMEASE
PROTEIN AMYD >gi|481065|pir||S37704 amyD protein -
Thermoanaerobacterium thermosulfurigenes
>gi|565383|gb|AAB00843.1| (M57692) membrane protein for
maltose transport [Thermoanaerobacterium
thermosulfurigenes] >gi|228282|prf||1802282A sugar
transport protein [Thermoanaerobacterium
thermosulfurigenes]
Length = 292
Score = 107 bits (265), Expect = 2e-22
Identities = 80/287 (27%), Positives = 139/287 (47%), Gaps = 16/287 (5%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+ I P + + + L P I IY +FT+ N PV F+GL+NF + D +F
Sbjct: 16 LFIAPTLLSLIIVVLIPFIIGIYYSFTDWNGINQPV-------FIGLKNFMTLRDDAEFW 68
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
++ +T F + + +VG+ L++L K + + R +P + L +W F
Sbjct: 69 NSIIFTAKFAVACIVIINVVGLSLAMLVTRK-IFARNFMRTAFYLPNLIGGLILGFIWNF 127
Query: 135 MFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPD 194
+F VF I+ + I W++ F L I+ W ++M + A ++S+P
Sbjct: 128 IFVDVFQTISD---ATHIGWLGGWLSTTNTGFWGLVIVTSWQMIGYVMVIYIAYIESIPT 184
Query: 195 TLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGL--FEDK 252
LIEA+ IDGAN WQ+FR+V+ P ++ + +T + SF+ F AG +
Sbjct: 185 DLIEASKIDGANSWQQFRNVVFPLIAPAFTVSLFITLSNSFKLFDQNLSLTAGAPGNTTQ 244
Query: 253 FILLYGFRKAFGATP-HYGRATAVMVIATMVLAIYMYINVKITRLQE 298
I L ++ AF A G+A AV++ +++A+ I V +T+ +E
Sbjct: 245 MITLNIYQTAFSAQEMAVGQAKAVIMF--LIIAVISVIQVYLTQKRE 289
>pir||E70703 probable uspA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1524284|emb|CAB02051.1| (Z79702) uspA [Mycobacterium
tuberculosis]
Length = 290
Score = 107 bits (265), Expect = 2e-22
Identities = 73/282 (25%), Positives = 134/282 (46%), Gaps = 16/282 (5%)
Query: 4 DEMKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLEN 63
D ++ T A L+ P + + F L PI+ ++L+ L G L++VGL N
Sbjct: 3 DAPRRRTALAYALLAPSLVGVVAFLLLPILVVVWLSLHRWDL-------LGPLRYVGLTN 55
Query: 64 FKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWAL 123
++ +L+D F + T +FVA V + ++G+ L+ ++ + G ++R L ++PW
Sbjct: 56 WRSVLTDSGFADSLVVTAVFVAIVVPAQTVLGL-LAASLLARRLPGTGLFRTLYVLPWIC 114
Query: 124 PLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMT 183
L +W+++ P G I+ +L + W+ DP A ++ + VW ++
Sbjct: 115 APLAIAVMWRWIVAPTDGAISTVL-----GHRIEWLTDPGLALPVVSAVVVWTNVGYVSL 169
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
A L ++P + AA DGA+ WQRF + LP + + F + ++ Q F Y
Sbjct: 170 FFLAGLMAIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYA 229
Query: 244 YNAGLFEDKFILLYG--FRKAFGATPHYGRATAVMVIATMVL 283
G + L+ + +AFGA GRA+ + V+ ++L
Sbjct: 230 LTGGGPQGSTDLVAHRIYAEAFGAAA-IGRASVMAVVLFVIL 270
>emb|CAB76329.1| (AL158061) putative binding-protein dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 308
Score = 107 bits (264), Expect = 2e-22
Identities = 77/272 (28%), Positives = 128/272 (46%), Gaps = 15/272 (5%)
Query: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFK 78
P + F L PI YS+YL+ QL G FVGL+N+ L D++F ++
Sbjct: 34 PFVAVFALVFLAPIAYSVYLSLFRDQL-------IGGTTFVGLDNYAEALKDDRFWASLG 86
Query: 79 WTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDP 138
+F+A V + + + + ++L +S + G+ +R + +P+A+P + + +W FM+
Sbjct: 87 RVSLFLAVQVPIMLGIALLVALALDSGRLYGRDFFRISIFLPYAVPAVVATLMWGFMYGT 146
Query: 139 VFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIE 198
FG + + ++G+S P P ++ I W + M + +AL+ VP +L E
Sbjct: 147 RFGLVGDINGALGVSLPDPL--SPDLVLASIGNIVTWEFVGYNMLIFYSALRVVPHSLYE 204
Query: 199 AAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPY----LYNAGLFEDKFI 254
AA IDGA + + LP + + ATI + SFQ F P L + D
Sbjct: 205 AAQIDGAGQIRVITAIKLPAIRGALVIATIFSIIGSFQLFNEPSILQPLARNAITTDYTP 264
Query: 255 LLYGFRKAFGATPHYGRATA--VMVIATMVLA 284
Y + +F H AT VM + TMV+A
Sbjct: 265 NYYTYALSFNGQQHNYSATVAIVMGLITMVVA 296
>pir||T45202 probable transport protein malf [imported] - Mycobacterium leprae
>gi|699149|gb|AAA62915.1| (U15180) maltose transport
inner membrane protein [Mycobacterium leprae]
Length = 310
Score = 106 bits (263), Expect = 3e-22
Identities = 70/280 (25%), Positives = 136/280 (48%), Gaps = 12/280 (4%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
A +L+ P L +PI Y+++L+ L P E F+GL N++ IL+D
Sbjct: 29 AFLLVTPAAMLMLVVTAYPIGYAVWLSLQRYSLAT-PNETV----FIGLGNYQTILTDPY 83
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
+ +A T SV+++ ++G+ L+L+ + + + GK + R ++IP+++ + + W
Sbjct: 84 WWTALAVTLAITVVSVSIEFILGLMLALVMH-RTLLGKSLVRIAVLIPYSIVTVVASYSW 142
Query: 133 KFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSV 192
+ + P G + LL + + + + + I+EVW PFM ++ L V
Sbjct: 143 YYAWTPGTGYLASLLPQGSVP-----LTEQIPSLSIVIIVEVWKTTPFMSLLLLVGLALV 197
Query: 193 PDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFEDK 252
P+ L++AA +DGA W+R +ILP + + A + + +F+ F Y+ G+
Sbjct: 198 PEDLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNIYVLTRGVNNTD 257
Query: 253 FILLYGFRKAF-GATPHYGRATAVMVIATMVLAIYMYINV 291
+ + G+ F G G A +V++ + L ++I V
Sbjct: 258 SVSILGYDNLFKGFNVGLGSAISVLIFGCVALIAVIFIKV 297
>pir||C70952 probable sugA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|2695822|emb|CAA15892.1| (AL021006) sugA
[Mycobacterium tuberculosis]
Length = 307
Score = 106 bits (261), Expect = 5e-22
Identities = 75/291 (25%), Positives = 135/291 (45%), Gaps = 34/291 (11%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
A +L+ P + +PI Y+++L+ L P + A F+GL N+ IL D
Sbjct: 26 AFMLVAPAAMLMVAVTAYPIGYALWLSLQRNNLAT-PNDTA----FIGLGNYHTILIDRY 80
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
+ +A T A SVT++ ++G+ L+L+ + + GK + R ++IP+ + + + W
Sbjct: 81 WWTALAVTLAITAVSVTIEFVLGLALALVMHRTLI-GKGLVRTAVLIPYGIVTVVASYSW 139
Query: 133 KFMFDPVFG-----------PINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFM 181
+ + P G P+ Q + S+GI + I EVW PFM
Sbjct: 140 YYAWTPGTGYLANLLPYDSAPLTQQIPSLGI----------------VVIAEVWKTTPFM 183
Query: 182 MTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVP 241
++ A L VP+ L+ AA +DGA+ W+R VILP + I A + + +F+ F
Sbjct: 184 SLLLLAGLALVPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIFDNI 243
Query: 242 YLYNAGLFEDKFILLYGFRKAF-GATPHYGRATAVMVIATMVLAIYMYINV 291
Y+ G + + G+ F G G A +V++ + + +++I +
Sbjct: 244 YVLTGGSNNTGSVSILGYDNLFKGFNVGLGSAISVLIFGCVAVIAFIFIKL 294
>emb|CAB70940.1| (AL137778) putative transport system inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 328
Score = 106 bits (261), Expect = 5e-22
Identities = 73/244 (29%), Positives = 118/244 (47%), Gaps = 16/244 (6%)
Query: 7 KKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKW 66
++ +A + + P I FL P++ S+Y AFT+ L + P ++GL+NF
Sbjct: 33 RRENLAGYLFMSPWIAGFLLLTAGPMVASLYFAFTDYNLFDAPT-------WIGLDNFSE 85
Query: 67 ILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLL 126
+ D ++R + + T +V +K++ +G++LL K RG+ YRA P +
Sbjct: 86 MFGDPRWRQSVRITLWYVVVGTPVKLIAALGVALLLAQKR-RGQAFYRAAFYAPSLIGAS 144
Query: 127 FSIT-VWKFMF--DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMT 183
S+ VWK +F D V QL GI + W DP +L + VW + M
Sbjct: 145 VSVAIVWKAIFSDDAVVDRTQQLF---GI-DAGGWTGDPELIIYSLVALTVW-QFGAPMV 199
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
+ A L+ VP L EAA +DGA ++F ++ LP +S + F +L + SFQ F Y+
Sbjct: 200 IFLAGLKQVPRELYEAADVDGAGKLRQFWNITLPMISPVLFFNVLLETIHSFQIFSSAYI 259
Query: 244 YNAG 247
G
Sbjct: 260 VGGG 263
>pir||F70693 probable ugpA protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1648885|emb|CAB03651.1| (Z81331) ugpA [Mycobacterium
tuberculosis]
Length = 303
Score = 104 bits (257), Expect = 1e-21
Identities = 81/291 (27%), Positives = 135/291 (45%), Gaps = 28/291 (9%)
Query: 14 LVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENF-KWILSDEK 72
+VL+ P + L F P+ +I L+F + + + + +FVGL N+ +W +
Sbjct: 23 VVLVGPNVALLLLFVYRPLADNIRLSFFDWNVSD------PSARFVGLSNYTEWFTRSDT 76
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
+ F T +F +V +++G+ L++L + + +RG+ + R+ + P+ +
Sbjct: 77 RQIVFN-TAVFTGAAVVGSMVLGLALAMLLD-RPLRGRNLVRSTVFAPFVISGAAVGLAA 134
Query: 133 KFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSV 192
+F+FDP FG I LL+ IG+ P++ D WA + I VW + + AALQ V
Sbjct: 135 QFVFDPHFGLIQDLLRRIGVG-VPDFYQDARWALFMVTITYVWKNLGYTFVIYLAALQGV 193
Query: 193 PDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG----- 247
L+EAA IDGA+ W FR V+LP + F +I S Q F V + G
Sbjct: 194 RRDLLEAAEIDGASRWAVFRRVLLPQLRPTTFFLSITVLINSLQVFDVINVMTRGGPEGT 253
Query: 248 -----LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKI 293
+++ FR +GAT V I +VL Y V++
Sbjct: 254 GTTTMVYQVYVETFRNFRAGYGAT--------VATIMFLVLLAVTYYQVRV 296
>sp|O32155|YURN_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YURN
>gi|7442704|pir||E70018 sugar permease homolog yurN -
Bacillus subtilis >gi|2635756|emb|CAB15249.1| (Z99120)
similar to sugar permease [Bacillus subtilis]
Length = 292
Score = 104 bits (257), Expect = 1e-21
Identities = 76/301 (25%), Positives = 145/301 (47%), Gaps = 15/301 (4%)
Query: 6 MKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFK 65
+ + I + ++P + FL F PI +++L+ Q +F EK F+GL+N+
Sbjct: 2 VNQNKIIPYLFLVPALV-FLLFVYIPIFENVFLSLF--QWSSFSPEKT----FIGLKNYV 54
Query: 66 WILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRG-KMIYRALLIIPWALP 124
+ D F A ++ S+ +V G+ L+ + K VR +R + +P +
Sbjct: 55 ELFHDPVFYQALTNNVLYAVISIVCQVFGGLILAAVLEDKLVRKWSPFFRTVFFLPVVIS 114
Query: 125 LLFSITVWKFMFDPVFGPINQLLKSIGISNPPN-WINDPFWAFLALNIIEVWLAYPFMMT 183
+ ++ F+++P G +NQLL++IG+ W+ D A L++ + W + ++
Sbjct: 115 MTVIALLFDFIYNPETGLLNQLLQAIGLDQLTRAWLGDDSTAMLSVIFVSQWQSVGYIAM 174
Query: 184 VITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
+ ++Q +PD L EAA +DGA Q+F H+ +P + A ++T +F F PY+
Sbjct: 175 LYIVSIQKIPDELYEAARLDGAGKIQQFFHITVPQTKEMSFVAVVMTLTGAFTVFNEPYI 234
Query: 244 YNAG--LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGAK 301
G + + + ++ AF G A+A IAT+VL I + +++ + + K
Sbjct: 235 LTGGGPGKASEVLSTFLYKSAF-TKDMMGYASA---IATVVLIITLALSLMQMKFFKTGK 290
Query: 302 E 302
E
Sbjct: 291 E 291
>pir||T36901 probable integral membrane transport protein - Streptomyces
coelicolor >gi|5419996|emb|CAB46388.1| (AL096743)
putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 311
Score = 102 bits (253), Expect = 4e-21
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 16/287 (5%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKF- 73
+LI P L F +P+I Y + L + K F G +NF I +++
Sbjct: 29 LLIGPAALLMLGFIAYPVISVFYYS-----LQEYNPTKPWRNGFAGFDNFVKIFTEDPVF 83
Query: 74 --RSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
F W+FV V L++L G+ L+L+ N +V G+ + RA++ PWA+ + + +
Sbjct: 84 WDTLVFSAKWVFV--EVGLQLLFGLALALIVNQTFV-GRGVGRAMVFSPWAVSGVLTSAI 140
Query: 132 WKFMFDPVFGPINQLLKSIGI-SNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
W +++ G + + L +GI S +W++D F A + ++W PF +I A LQ
Sbjct: 141 WVLLYNSQTG-VTRYLADMGIGSYGTSWLSDTSTVFSAAVVADLWRGVPFFAILILADLQ 199
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--L 248
SV L EAA +DGA+ ++F H+ LP + I +T+L + F + Y G
Sbjct: 200 SVSKDLYEAAEVDGASRLKQFWHITLPHLKDAIILSTLLRAVWEFNNVDLLYTLTGGGPA 259
Query: 249 FEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
E + LY + A +G A+A+ +A ++L + +++++
Sbjct: 260 GETTTLPLYIANTSVDA-HDFGYASALTTVAFVILLFCSIVYLRLSK 305
>emb|CAB55715.1| (AL117387) putative binding protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 303
Score = 102 bits (253), Expect = 4e-21
Identities = 76/283 (26%), Positives = 135/283 (46%), Gaps = 14/283 (4%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
A + +++P + ++ + P+IY+IY +FT + FP +F+GL+N++ + +
Sbjct: 17 ARVSMVVPAVLVYVALLVVPVIYAIYYSFT--EYNGFPHRVP---EFIGLDNYRTMFGSD 71
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
T + L +GL+LL + R R ++ P L L +
Sbjct: 72 DITGTMVVTAVVAVVGAVAVNLAALGLALLLQ-RTNRFNTFGRVVMFYPHVLSALVVGFL 130
Query: 132 WKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191
W+ + P G +N +L+ G + P +++DP WA ++ ++ VW + + + A LQ+
Sbjct: 131 WQAILGPQ-GVVNTMLEKAGTDSLP-FLSDPDWALWSMILVIVWSLFGVQLILYLAGLQA 188
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASF--QYFMVPYLYNAGLF 249
VP L+EAA IDGA+ WQ FR V P+++ + A ++TS S Y +V L G
Sbjct: 189 VPADLLEAARIDGASRWQTFRAVTWPSLASTVTVA-VITSGISLLKTYDVVVSLTGGGPA 247
Query: 250 EDKFILLYGFRKAFGATPHYGRATA---VMVIATMVLAIYMYI 289
L Y G A+A ++++A VLAI + +
Sbjct: 248 GSTKTLAYSILAVSFPQRDIGVASAQAVLLIVAAAVLAITVLV 290
>pir||S75971 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001331|dbj|BAA10818.1| (D64006) membrane bound
sugar transport protein [Synechocystis sp.]
Length = 279
Score = 101 bits (250), Expect = 9e-21
Identities = 66/288 (22%), Positives = 140/288 (47%), Gaps = 20/288 (6%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+ P + + + P + ++YL+F + + NF VGL+N+ + +D A
Sbjct: 3 VTPALLFLSAYLILPTLETVYLSFFDGRSRNF----------VGLKNYVFAFTDHTMLVA 52
Query: 77 FKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMF 136
F+ +++ + V +G+ +++L + VR + I ++++ +P A+ + + +WKF++
Sbjct: 53 FRNNLLWLVLVTGISVSLGLIIAVLVDK--VRYEAIAKSIIFLPMAISFVGASVIWKFVY 110
Query: 137 D------PVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
G +N ++ S+G + P W+ + AL I +WL F M +++AA++
Sbjct: 111 AYRPAGAEQIGLLNAIVTSLGFA-PVGWLVERSVNNFALIAIMIWLYTGFCMVILSAAVK 169
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFE 250
+P +IEAA IDGAN WQ F + +P + + + + F + ++ G
Sbjct: 170 GIPADVIEAARIDGANSWQIFWRITIPMIRSTLLVVSTTMVILVLKVFDIVFVMTGGNQG 229
Query: 251 DKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQE 298
+ I ++ F ++GR + + VI +++ M N++ + QE
Sbjct: 230 TEVIASLMIKEMFNYR-NFGRGSTIAVILLLLIVPVMITNIRRFKAQE 276
>pir||F75187 probable sugar abc transporter, permease protein PAB2334 -
Pyrococcus abyssi (strain Orsay)
>gi|5457458|emb|CAB48949.1| (AJ248283) probable SUGAR
ABC TRANSPORTER, PERMEASE PROTEIN [Pyrococcus abyssi]
Length = 284
Score = 101 bits (249), Expect = 1e-20
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 27/271 (9%)
Query: 8 KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWI 67
K+ +L+ P + LFF +P+I ++YLAFT K G L+ +
Sbjct: 4 KSKYIPYLLLTPAVVYLLFFIGYPLIQALYLAFT----------KNGAFS---LDTVRRA 50
Query: 68 LSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLF 127
+SD F A K+T + V +++++ + L+L N + +GK + L+IP + +
Sbjct: 51 ISDPTFWEALKYTILLALVIVPVQLILALVLALAVNRAF-KGKDLTIYALVIPLTISDVA 109
Query: 128 SITVWKFMFDPVFGPINQLLKSIGI-SNPPNWINDPF--WAFLALNIIEVWLAYPFMMTV 184
+ +W M +G IN+LL ++GI S+P ++ + FLA+ I EVW A + +
Sbjct: 110 AGLIWYTMLSD-YGFINKLLLNLGIISSPIHFFGYEYRMMEFLAIVIAEVWRATAIVFVI 168
Query: 185 ITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMV---- 240
I A LQ + +EAA + GA YW R R +++P + I A I+ + + Q F V
Sbjct: 169 ILAGLQMISREYLEAAEVFGAGYWTRLRRIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
Query: 241 -----PYLYNAGLFEDKFILLYGFRKAFGAT 266
P L G ++ I YG + T
Sbjct: 229 AGRDIPVLAGEGFYQLTEIKDYGVASIYALT 259
>sp|O58759|YA38_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1038
>gi|7442711|pir||B71097 hypothetical protein PH1038 -
Pyrococcus horikoshii >gi|3257453|dbj|BAA30136.1|
(AP000004) 291aa long hypothetical protein [Pyrococcus
horikoshii]
Length = 291
Score = 101 bits (248), Expect = 2e-20
Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 26/292 (8%)
Query: 8 KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWI 67
+ + +LP +T + F ++P+ +IYL+F LG+ KFVGLEN+K +
Sbjct: 2 RRNLTPFFFLLPALTLMVPFVIYPVFKTIYLSFF---LGD---------KFVGLENYKNV 49
Query: 68 LSD------EKFRS------AFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRA 115
L E+F + A +++A + + +G+G +LL K V+G I ++
Sbjct: 50 LLSPDIVNLERFPTKSPPWGALIHNIVWIAIHLPTTIFLGLGFALLLRKKEVKGSSIIKS 109
Query: 116 LLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPP-NWINDPFWAFLALNIIEV 174
++ + +P++ + +F+F+ G I K IGI W P A ++ + +
Sbjct: 110 IIFLGMVIPMVVGGLIIRFLFEEGAGVIPAFFKLIGIEKLAITWTAYPQTALFSVILGSI 169
Query: 175 WLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAAS 234
W+ F M + +A L S+P EAA+IDGAN +Q FR VI P + +T
Sbjct: 170 WIWTGFSMLMYSAGLASIPKDYYEAALIDGANKFQIFRFVIWPLLRPITVVIVAMTLLWD 229
Query: 235 FQYFMVPYL-YNAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAI 285
+ F + Y+ G +L F + +Y A V V+ T + I
Sbjct: 230 LKIFDIVYVATGGGPGGASMVLALQMWDYFARSLNYNYAAVVAVLLTALTFI 281
>emb|CAB61917.1| (AL133278) putative transport system permease protein [Streptomyces
coelicolor A3(2)]
Length = 310
Score = 100 bits (247), Expect = 2e-20
Identities = 78/284 (27%), Positives = 137/284 (47%), Gaps = 14/284 (4%)
Query: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFK 78
PG+ F L+P + ++ +FT+ + P E FVGL NF+ +L D+ F +
Sbjct: 36 PGLLITGAFILYPFVSTLVNSFTDRRT-LVPGE------FVGLANFRELLHDDMFWIGLR 88
Query: 79 WTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDP 138
+ ++V V VL+ + L+LL K + G +R+ P ++ +W ++ D
Sbjct: 89 NSSLYVLGVVPALVLLPLLLALLVQ-KNIPGITFFRSAFYTPVVASIVVVGLIWVWLLDE 147
Query: 139 VFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIE 198
G +N LL+++G +P +++D + L+ + VW + M + AAL +VP L E
Sbjct: 148 R-GLVNSLLETLG-GSPVGFLSDQWLILLSAMGVTVWKGLGYYMIIYLAALANVPRELHE 205
Query: 199 AAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY----NAGLFEDKFI 254
AA +DGA +RF V +P V + L+S A+F+ F YL ED +
Sbjct: 206 AAAVDGAGAVRRFLTVTVPAVRSTMVLVAALSSVAAFKVFSEVYLMAGPSGGPAGEDTTL 265
Query: 255 LLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQE 298
++ R G T G A+A+ V+ V + M + ++ R ++
Sbjct: 266 VMLVQRTGTGLTGRVGYASAISVVVFAVTVVLMLLVLRADRKED 309
>pir||T36913 probable integral membrane sugar transport protein - Streptomyces
coelicolor >gi|5420008|emb|CAB46400.1| (AL096743)
putative integral membrane sugar transport protein
[Streptomyces coelicolor A3(2)]
Length = 314
Score = 99.8 bits (245), Expect = 4e-20
Identities = 79/275 (28%), Positives = 139/275 (49%), Gaps = 16/275 (5%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+LP + + P + ++ ++F + +P ++ F G N+ +LSD R +
Sbjct: 35 LLPALIFMIVVTQLPFVATLVISFFDWN-ALYPDARS----FTGFANYGDVLSDPALRKS 89
Query: 77 FKWTWIFVATSVTLKVLV-GIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF- 134
WT I + +V L LV G+ L+LL + ++ +G+ + R LLI P+ + + + +WK
Sbjct: 90 V-WTTILLTVAVVLVSLVLGLALALLLDRRF-KGRGVVRTLLIAPFLVVPVAAALLWKHV 147
Query: 135 MFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPD 194
+++P +G +N LL +G P+WI++ LA+ VW PFMM ++ A LQS
Sbjct: 148 LYNPEYGLLNGLLHYVG-GPQPDWISNT--PLLAVEASLVWQWTPFMMLILLAGLQSRDQ 204
Query: 195 TLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFEDKFI 254
IEAA +DGA WQ F H+ LP + + + +L S Q F + +G
Sbjct: 205 QQIEAARVDGAGDWQIFVHLTLPHLRRYLELGALLGSIYIVQNFDAVFTITSGGL-GTAN 263
Query: 255 LLYGFRKAFGATPHYGRATA---VMVIATMVLAIY 286
L Y ++F G A+A ++VI ++++A +
Sbjct: 264 LPYTVYQSFYQAHENGLASAAGVLVVIGSIIIATF 298
>dbj|BAB04837.1| (AP001511) lactose transport system (permease) [Bacillus
halodurans]
Length = 318
Score = 99.8 bits (245), Expect = 4e-20
Identities = 80/289 (27%), Positives = 136/289 (46%), Gaps = 16/289 (5%)
Query: 8 KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWI 67
K + +I P + F + P+I S+Y +FT+ + + +VGL+N+ I
Sbjct: 27 KESFVGYAMISPWLLGFFGLVIGPMIASLYFSFTDYDM-------LSSANWVGLQNYIHI 79
Query: 68 L-SDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLL 126
SD +F + K T IFV LK+ + L++L+N+ +G ++ + IP +
Sbjct: 80 FTSDPRFVQSLKVTLIFVFVPTPLKLAFALFLAMLFNTGR-KGSGLFSTIYYIPSIIGGS 138
Query: 127 FSITV-WKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVI 185
++ V WK +F G +N L+ G S NWI +A L ++ VW + M +
Sbjct: 139 VAVAVVWKQLFGSR-GAVNSFLELFGFSGV-NWIGSTDYALSILILLVVW-QFGSPMIIF 195
Query: 186 TAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYN 245
A L+ +P L EAA +DGAN +++F + LP ++ I F I+ + F F YL
Sbjct: 196 LAGLRQIPQELYEAASVDGANSFRKFFSITLPMLTPVIFFNLIMQTIGGFMTFTQAYLIT 255
Query: 246 AG--LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVK 292
G L F +Y + AF G A+A+ I +++ ++ K
Sbjct: 256 GGGPLDSTLFYAVYLYEVAFEYL-RMGYASAMAWILLVIIGGITFVFFK 303
>emb|CAB59589.1| (AL132662) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 302
Score = 98.3 bits (241), Expect = 1e-19
Identities = 72/284 (25%), Positives = 139/284 (48%), Gaps = 10/284 (3%)
Query: 10 TIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILS 69
T+ +LI P + L+ L+P+ ++ ++F + +L + G FVGL N++ +L
Sbjct: 10 TLWPYLLIAPAVLGMLYLLLYPLARAVLISFQDFRLRQLIL---GDADFVGLRNYRTLLG 66
Query: 70 DEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSI 129
D +F + T++F+A V +++ ++L+ + + + L++ WA+P++ +
Sbjct: 67 DPEFWEVVRRTFVFMAVGVVAIMVLSTLVALMTERLGRAARTVVLSSLVLVWAVPVVAAT 126
Query: 130 TVWKFMFDPVFGPINQLLKSIGISNPPN--WINDPFWAFLALNIIEVWLAYPFMMTVITA 187
TV++++F FG +N+ L +G + W AF + ++ VW + PF + +
Sbjct: 127 TVFQWLFHSEFGIVNETLTGLGFESYEGYPWFAHGGAAFGIVVVLIVWQSVPFAAITLYS 186
Query: 188 ALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFM-VPYLYNA 246
AL +VP L E+A +DGA + FR V P + L +F+ F+ + +
Sbjct: 187 ALVTVPAELYESARMDGAGAARVFRSVTFPLIRPIFMLVLSLEVIWTFKAFVQIWVMTRG 246
Query: 247 GLFEDKFIL-LYGFRKAF-GATPHYGRATAVMVIATM--VLAIY 286
G E IL +Y + A G G A +++ + M VL +Y
Sbjct: 247 GPGEATTILPVYAVQTALAGQRYDLGSAASMLTVLLMSGVLVLY 290
>sp|P55602|Y4OQ_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y4OQ
>gi|2182561|gb|AAB91803.1| (AE000089) Y4oQ [Rhizobium
sp. NGR234]
Length = 309
Score = 97.9 bits (240), Expect = 1e-19
Identities = 79/278 (28%), Positives = 134/278 (47%), Gaps = 22/278 (7%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
AA++L++ G+ P++YS Y + T L V F+GL N+ +L
Sbjct: 33 AAIMLLVLGV---------PLVYSFYYSLTGWSL----VVPGSDQDFIGLLNYTDVLRSS 79
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
+F +A + T I+ +V+L+ +GI ++L N ++ G+ ++R+L++IP +
Sbjct: 80 EFWAAIRVTLIYAVVAVSLECALGILFAVLLNLEFF-GRGLFRSLMLIPMVITPAVVGIF 138
Query: 132 WKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191
WK +++ G N LL ++G P W++ A ++ I++VW + PF +I A LQS
Sbjct: 139 WKLLYEQDSGVFNYLLGTLGFEPVP-WLSLTV-ALASVIIVDVWQSTPFFTLIILAGLQS 196
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFAT---ILTSAASFQYFMVPYLYNAGL 248
+ + AA DGAN Q FR++ LP + I A I+ A F + L G
Sbjct: 197 LDRDTVSAAQADGANALQVFRYLTLPHLVPYIMIAAAFRIIGVMADFDKIFLLTLGGPGN 256
Query: 249 FEDKFILLYGFRKAFGATPHYGRATAV-MVIATMVLAI 285
+ +Y + F GR TA+ + VLAI
Sbjct: 257 VTTT-LSVYAYNTGFKVF-DIGRTTAISWIYVVFVLAI 292
>pir||E71220 probable sugar transport membrane protein - Pyrococcus horikoshii
>gi|3256409|dbj|BAA29092.1| (AP000001) 284aa long
hypothetical sugar transport membrane protein
[Pyrococcus horikoshii]
Length = 284
Score = 97.9 bits (240), Expect = 1e-19
Identities = 74/271 (27%), Positives = 128/271 (46%), Gaps = 27/271 (9%)
Query: 8 KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWI 67
K+ +L++P + LFF +P++ ++YLAFT K G L+ +
Sbjct: 4 KSKYIPYLLLIPAVAYLLFFIGYPLVQALYLAFT----------KNGAFS---LDTVRRA 50
Query: 68 LSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLF 127
SD F A K+T + V +++++ + L+L N + +G+ + L+IP + +
Sbjct: 51 TSDPTFWEALKYTILLAIVIVPIQLVLALILALAVNRTF-KGRDLAIYALVIPLTISDVA 109
Query: 128 SITVWKFMFDPVFGPINQLLKSIGI-SNPPNWINDPF--WAFLALNIIEVWLAYPFMMTV 184
+ +W M +G IN+L ++G+ SNP ++ + FLA+ I EVW A + +
Sbjct: 110 AGLIWYTMLAD-YGFINKLFLNLGLLSNPIHFFGYEYRTMEFLAIVIAEVWRATAIVFVI 168
Query: 185 ITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMV---- 240
I A LQ + +EAA + GA YW R R +++P + I A I+ + + Q F V
Sbjct: 169 ILAGLQMISREYLEAAEVFGAGYWTRLRKIVIPMLKPSIQSALIIRTLFAMQVFGVVWIL 228
Query: 241 -----PYLYNAGLFEDKFILLYGFRKAFGAT 266
P L G ++ I YG + T
Sbjct: 229 AGRDIPVLAGEGFYQLTEIKDYGVASIYALT 259
>pir||G72203 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4982438|gb|AAD36916.1|AE001822_9
(AE001822) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 290
Score = 97.5 bits (239), Expect = 2e-19
Identities = 75/274 (27%), Positives = 128/274 (46%), Gaps = 24/274 (8%)
Query: 30 WPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFKWTWIFVATSVT 89
+P ++ + LAF+ + G+ KFVGL+NF I D+ F F T F++ +
Sbjct: 28 YPFVWMLILAFSRWKF-------VGSPKFVGLQNFFRIFEDKIFWRVFLNTMNFLSYFIP 80
Query: 90 LKVLVGIGLSLLYNS-KYVRGKMIYRALLIIPWALPLLFSITVWKFMFDPVF---GPINQ 145
+ + I ++ N KY ++ + + + + + S + MF +F GPIN+
Sbjct: 81 MVFIASILFAIALNRMKY------FKTFVTLSFLVAYVSSGVAYSIMFQRIFSETGPINR 134
Query: 146 LL-KSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDG 204
L + GI+ P W DP A L + I+ W + ++ + LQ++P ++ EAA +DG
Sbjct: 135 FLYNAFGITIP--WFTDPQLAMLTIAIMVTWKFVGYYGLILYSGLQAIPKSIFEAAELDG 192
Query: 205 ANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--LFEDKFILLYGFRKA 262
A W +F + LP ++ I IL SF F PY+ G + +LY + A
Sbjct: 193 ATSWVKFWKITLPLLNPAIVTVLILAVNLSFGIFTEPYMITGGGPMNRTLTFMLYMYNTA 252
Query: 263 F-GATPHYGRATAVMVIATMVLAIYMYINVKITR 295
F P Y A+M A + +I ++I I +
Sbjct: 253 FQRINPSYATTIAIMT-ALINFSIVIFIRKVIEK 285
>pir||E72357 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981115|gb|AAD35681.1|AE001734_8
(AE001734) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 420
Score = 96.7 bits (237), Expect = 3e-19
Identities = 65/241 (26%), Positives = 113/241 (45%), Gaps = 7/241 (2%)
Query: 60 GLENFKWILSDEK-FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLI 118
GL NF D+ F A T +V SV ++ + + ++LL NS V+ ++ +R
Sbjct: 175 GLVNFLLDAKDKNLFLKALTNTLYYVILSVPSQIFISLMIALLLNSN-VKFRVFFRTAYF 233
Query: 119 IPWALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAY 178
IP+ ++ VWK++F+ FG +N +L I P +W+ D W + I+ VW
Sbjct: 234 IPFVTSVVAISLVWKWIFNDEFGLLNYILSLFNIE-PISWLKDERWTIPTIAIVSVWKTV 292
Query: 179 PFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYF 238
+ + A LQ++ + EAA +DGA+ Q+F ++ P +S F I++ +F+ F
Sbjct: 293 GYDAVIFLAGLQNIDRSYYEAAEVDGASSLQKFFYITWPLLSPTTFFLLIVSLIGAFKVF 352
Query: 239 MVPYLYNAGL----FEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
Y+ GL L+Y F G A+A I ++ I+ +I ++
Sbjct: 353 AEVYVLYDGLPGPYNNSGMTLVYYVFDLFYRQQRMGIASAAAYILFAIILIFTFIQYRVG 412
Query: 295 R 295
R
Sbjct: 413 R 413
>gb|AAG20919.1| (AE005158) sn-glycerol-3-phosphate transport system permease; UgpA
[Halobacterium sp. NRC-1]
Length = 297
Score = 96.0 bits (235), Expect = 5e-19
Identities = 74/290 (25%), Positives = 138/290 (47%), Gaps = 14/290 (4%)
Query: 9 TTIAALVLILPGITAFLFFNLWPIIYSIYLA-FTNAQLGNFPVEKAGTLKFVGLENFKWI 67
+T+ AL L+LP + F +P + + L+ + LG +VG ENF +
Sbjct: 10 STLQALGLLLPSVVVLGAFLYYPGLETFRLSLYRTLFLGQ-------QTAWVGAENFVQL 62
Query: 68 LSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLF 127
L+ + +F + +F A VT +L+ I + L + V G Y I P+ALP
Sbjct: 63 LTSTAYHHSFAISVLFAAIVVTGTLLLSIAVGYLLFTVSV-GSSAYLIAAIWPYALPPAV 121
Query: 128 SITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITA 187
+ + F+ P G L+++ +W N AF + ++ +W + + + A
Sbjct: 122 AAILLNFILHPNLGVFTHYLEAV-TPFTLDWFNSGPQAFTVVAVVAIWKQLGYNIIFVVA 180
Query: 188 ALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASF--QYFMVPYLYN 245
A ++P TL E A +DG + +R R V LP ++ + F T++ + +F + +V L +
Sbjct: 181 AFNTIPKTLTERATLDGVGHLRRLRSVYLPLMAPTLVFLTVMNTIYAFFSTFPIVDLLTS 240
Query: 246 AGLFEDKFILLYG-FRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
G + +L++ +R AF G A+A VI ++A+ MY+ ++++
Sbjct: 241 GGPGDATNLLIFKLYRDAFEFN-SLGLASAESVILFALVAVLMYVQIRVS 289
>emb|CAB51940.1| (AJ132472) Putative ABC-type Sugar Transporter [Ruminococcus
flavefaciens]
Length = 330
Score = 95.6 bits (234), Expect = 7e-19
Identities = 71/275 (25%), Positives = 131/275 (46%), Gaps = 11/275 (4%)
Query: 18 LPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAF 77
+P I AFL F L+P IY+ L FT+ + N P K ENFK IL ++ FR +
Sbjct: 19 IPFIVAFLIFTLYPTIYTATLGFTDCKGVNGPENYHFLDK--PFENFKSILENDTFRISL 76
Query: 78 KWTWIFVATSVTLKVLVGIGLSLLY--NSKYVRGKMIYRALLIIPWALPLLFSITVWKFM 135
K T + + ++ + + L+ + +S +RGK ++ + +P + ++ +
Sbjct: 77 KNTILIWIMNFIPQISIALLLTAWFTSHSNEIRGKGFFKVVFYMPNIITAATVAILFHTL 136
Query: 136 FDPVFGPINQLLKSIGISNPPNWINDPFWAF-LALNIIEVWLAYPFMMTVITAALQSVPD 194
F+ GP+N L+S G+ P + A + + I+ W Y M V+ + + +
Sbjct: 137 FNYPIGPVNDFLESTGLRESPYYFFTSKTACRIIVAFIQFWTWYGNTMIVLISGVLGISP 196
Query: 195 TLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY-NAGLFEDKF 253
+ EAA IDGAN Q F + +P + + + I + F +P+L+ N G D+
Sbjct: 197 DIYEAAEIDGANGVQTFFRITIPNLKTVLLYTLITSLVGGLNMFDIPFLFLNGG--PDRA 254
Query: 254 IL---LYGFRKAFGATPHYGRATAVMVIATMVLAI 285
++ + +AF + Y +A A +I +++A+
Sbjct: 255 TTTTSVFIYNQAFAGSYLYNKAAAASMIMWVIIAL 289
>pir||C72378 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4980925|gb|AAD35504.1|AE001721_3
(AE001721) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 294
Score = 95.2 bits (233), Expect = 9e-19
Identities = 77/283 (27%), Positives = 143/283 (50%), Gaps = 21/283 (7%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+L+ P + + F + P+I ++ +AFT+ ++ + T FVG +NFK I +D
Sbjct: 8 LLLSPLLIFVIIFFVIPVILTVVIAFTD-------MDYSFTWNFVGFQNFKDISTDFIIP 60
Query: 75 SAFKWTWIFVATSVTLKVL-VGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWK 133
T+I+ ++ L L + LSLL S R +R L ++P P + +W
Sbjct: 61 RVIANTFIYTFGTLGLFNLGTALLLSLLTTSISDRWGNFFRTLWMLPRLTPSVVYGLLWL 120
Query: 134 FMFDPV-FGPINQLLKSIGISNPPNWIND-PFWAFLALNIIEVWLAYPFMMTVITAALQS 191
+MFDP +G +N + G+ P +W++ P W + N ++ M V TAA++S
Sbjct: 121 WMFDPTEYGLVNFIRGLFGLP-PQDWLHSAPMWMIIFAN---GFIGASMGMLVFTAAIKS 176
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFAT---ILTSAASFQYFMVPYLYNAG- 247
+P+ AA IDGA+++ R + LP + + F T L+ ASF+Y ++ + + G
Sbjct: 177 IPEDYYRAARIDGASWFMIVRKITLPLIKWHLLFVTAYQTLSLLASFEYILI--ITDGGP 234
Query: 248 LFEDKFILLYGFRKAFGATPH-YGRATAVMVIATMVLAIYMYI 289
++ + LY + AF YG A +++++ V++ ++Y+
Sbjct: 235 VYRTEVWALYTYHNAFSHFRFGYGAALSIILVIIGVISAFVYM 277
>pir||C75208 sugar transport system permease protein PAB2230 - Pyrococcus abyssi
(strain Orsay) >gi|5457623|emb|CAB49114.1| (AJ248283)
sugar TRANSPORT SYSTEM PERMEASE PROTEIN [Pyrococcus
abyssi]
Length = 313
Score = 92.4 bits (226), Expect = 6e-18
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 19/298 (6%)
Query: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILS----DEKFR 74
P I F L P+I +IY++FT + N+ VE+ FVG N+ ++ D F+
Sbjct: 16 PMIIMVALFYLIPLILTIYISFTGMR--NWNVERY-LHDFVGTYNYYRLVHMFKYDPTFK 72
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
+ T +FV ++ + VL G+GL+L + +R L ++P P+ VW +
Sbjct: 73 AVILTTIVFVGITLIINVLGGLGLALATFFMSEKPGSAFRLLWLLPRMSPIAVYSLVWYY 132
Query: 135 MFD-PVFGPINQLLKSIGISNPP-NW-INDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191
F G +N +L +G+ N P W N P+ A+ + + + F M V T+AL
Sbjct: 133 FFHGSSIGTLNAILMRLGLINQPIPWGQNVPWGAWSIIIFVNGLVGVSFGMIVFTSALNQ 192
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY---NAGL 248
+P L+ AA +DGA+ WQ R ++ P + F +LT P+L+ L
Sbjct: 193 IPKELVIAARVDGASAWQISRRILFPLMK--WHFLYVLTWQFLSLLTTYPHLFLLVEWDL 250
Query: 249 FEDKF---ILLYGFRKAFG-ATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGAKE 302
+ + + LY F AFG G A A VI +++ I I +K+ + +E K+
Sbjct: 251 VDRDYGTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIIGGVITLKVLKFEEMIKK 308
>emb|CAB72405.1| (AL138978) putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 313
Score = 92.4 bits (226), Expect = 6e-18
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 19/287 (6%)
Query: 17 ILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSA 76
+ P + L F PI+Y + +AFT+ QL E FVG +NF DE F +A
Sbjct: 39 VSPAVVLLLLFLAGPIVYCVVIAFTDLQLTGQAQES-----FVGFDNFTRAFKDEAFLNA 93
Query: 77 FKWTWIF-VATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFM 135
T +F V +S+ + +G+ L+ L + + +++ W LP + V F+
Sbjct: 94 VWLTLVFTVLSSLIGQNTLGLALASLMQRASKPVRTLTGGIVVTAWVLPEV----VAGFL 149
Query: 136 FDPVF---GPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSV 192
F G +N +L + + + NW+ LA++ VW F M V +AAL +
Sbjct: 150 LYAFFRREGTLNAILDWLHLPSQ-NWLFT--LPILAVSFANVWRGTAFSMLVYSAALNEI 206
Query: 193 PDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG--LFE 250
P + EAA DGA+ W+R H+ LP + + I +L + + F + ++ G
Sbjct: 207 PKEVTEAAEADGASGWRRMWHITLPMIRRSIGTNLMLNTLQTLSVFGLIWVMTRGGPSGN 266
Query: 251 DKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQ 297
+ + L+ + +AF G TAV ++ ++ +++ + +++ R +
Sbjct: 267 SQTLPLFMYEQAF-QNSLIGYGTAVALLLLLIGSLFSVVYLRLLRTE 312
>gb|AAF37728.1| (AF086819) cellobiose transport permease BglA [Thermobifida fusca]
Length = 302
Score = 92.4 bits (226), Expect = 6e-18
Identities = 69/296 (23%), Positives = 140/296 (46%), Gaps = 17/296 (5%)
Query: 11 IAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSD 70
+ + I P F F L+P++Y+++++ + L G F ++ ++ D
Sbjct: 18 VTPYLFIAPFFILFAIFGLFPLLYTVWVSLHDWTL------LGGNQGFNWFAHYTRLVQD 71
Query: 71 EKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT 130
KF ++ T+ +V ++L+ + L+ S+ +R +R L++P+ +
Sbjct: 72 AKFWNSLYNTFGIFVVAVVPQLLLAMYLADTL-SRRIRAVNFFRMGLLLPYLTSIAAVAI 130
Query: 131 VWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
V+ +F FG IN +L GI +P NW F +++A+ ++ W + + AA+
Sbjct: 131 VFSQLFGTQFGLINYVLGFFGI-DPINWQAGRFSSWVAIAVMIDWRWTGYNALIYLAAMS 189
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY------ 244
++P + EAA IDGA+ ++F + +P + I F I+++ Q F P ++
Sbjct: 190 AIPREIYEAAAIDGASRMRQFWQITIPMLRPTIIFTVIVSTIGQMQLFTEPVIFGDVAGG 249
Query: 245 NAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGA 300
G F+ +L+ F +AF +YG +A+ M++ + +N +T +GA
Sbjct: 250 TQGQFQTTMMLI--FEEAFRFN-NYGYGSAIAWTLFMIIVVLSALNALLTSKIKGA 302
>emb|CAC01655.1| (AL391072) putative sugar-transporter integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 310
Score = 92.4 bits (226), Expect = 6e-18
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 11/221 (4%)
Query: 11 IAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSD 70
+ L++ P + FL + P++ S YL+ T+ + A VGL++++ +L D
Sbjct: 26 LTGLLMTAPAVALFLVMMVVPLVLSGYLSLTDWD--GYTAHPA----MVGLDHYRALLDD 79
Query: 71 EKFRSAFKWTWIFVATSVTLKV-LVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSI 129
+ R A W + +A TL V VG+ L+L ++ R + R + P+ + L
Sbjct: 80 PEVRQA-AWITVLLAVIGTLAVNAVGLALALAISTPG-RTNTVLRTVFFYPYVISALIIG 137
Query: 130 TVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAAL 189
+W + G +N +L++ G + P +++ P WA +L + VW + F + + A L
Sbjct: 138 FLWSALLS-TNGAVNSVLRAAGHAGLP-FLSQPGWALASLIGVVVWSGFGFTLVLYIAGL 195
Query: 190 QSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILT 230
+VP +L+EAA IDGA W+ R V LP ++ + +LT
Sbjct: 196 HTVPASLLEAARIDGAGRWRILRSVTLPMIAPVVTVNVVLT 236
>sp|P10905|UGPA_ECOLI SN-GLYCEROL-3-PHOSPHATE TRANSPORT SYSTEM PERMEASE PROTEIN UGPA
>gi|72501|pir||MMECUA sn-Glycerol-3-phosphate transport
system permease protein - Escherichia coli
>gi|43247|emb|CAA31532.1| (X13141) ugpA protein (AA
1-295) [Escherichia coli] >gi|466588|gb|AAB18427.1|
(U00039) CG Site No. 40 [Escherichia coli]
>gi|1789861|gb|AAC76477.1| (AE000421) sn-glycerol
3-phosphate transport system, integral membrane protein
[Escherichia coli K12]
Length = 295
Score = 92.1 bits (225), Expect = 8e-18
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 24/290 (8%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+L+ P + + F +WP +++ + + F + +FVGL+NF + D +
Sbjct: 16 LLVAPQLIITVIFFIWPAGEALWYSLQSVDPFGF------SSQFVGLDNFVTLFHDSYYL 69
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKY---VRGKMIYRALLIIPWALPLLFSITV 131
+F WT I +T VT+ G+ +SL + + VRG Y+ L+++P+A+ + +
Sbjct: 70 DSF-WTTIKFSTFVTVS---GLLVSLFFAALVEYIVRGSRFYQTLMLLPYAVAPAVAAVL 125
Query: 132 WKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191
W F+F+P G I L G N + A + VW + AALQS
Sbjct: 126 WIFLFNPGRGLITHFLAEFGYDW--NHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQS 183
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSA--ASFQYF-MVPYLYNAGL 248
+P +LIEAA IDGA +RF + LP ++ P++F ++ + A F F ++ + G
Sbjct: 184 IPRSLIEAAAIDGAGPIRRFFKIALPLIA-PVSFFLLVVNLVYAFFDTFPVIDAATSGGP 242
Query: 249 FEDKFILLYG-FRKAFGATPHYGRATAVMVIATMVLAI----YMYINVKI 293
+ L+Y +R+ F A +V+ +V+ + + Y+ K+
Sbjct: 243 VQATTTLIYKIYREGFTGLDLASSAAQSVVLMFLVIVLTVVQFRYVESKV 292
>dbj|BAA14894.1| (D90770) Sn-glycerol-3-phosphate transport system permease protein
UgpA. [Escherichia coli]
Length = 228
Score = 91.7 bits (224), Expect = 1e-17
Identities = 62/225 (27%), Positives = 113/225 (49%), Gaps = 12/225 (5%)
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
+ S + W + A V ++G+ +++ +N ++ R + R+L+I+ + P + + W
Sbjct: 5 WHSLWMTVW-YTALVVAGSTVLGLAVAMFFNREF-RLRKTARSLVILSYVTPSISLVFAW 62
Query: 133 KFMFDPVFGPINQLLKSIG--ISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
K+MF+ +G +N L + P W ++P +F+ + + +W +P+ A LQ
Sbjct: 63 KYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQ 122
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFE 250
++ +L EAA +DGAN WQRFR V LP + +A L + F F YL +
Sbjct: 123 TIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTTKV-- 180
Query: 251 DKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+ +Y ++ AF A G+A A+ V VL I ++ + +TR
Sbjct: 181 -DILGVYLYKTAF-AFNDLGKAAAISV----VLFIIIFAVILLTR 219
>gb|AAC04469.1| (AF007800) MtlF [Pseudomonas fluorescens]
Length = 296
Score = 91.7 bits (224), Expect = 1e-17
Identities = 62/215 (28%), Positives = 108/215 (49%), Gaps = 9/215 (4%)
Query: 16 LILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRS 75
L+ P + L + + P+ ++Y + L +P E +FVGLENF + ++D F
Sbjct: 16 LVTPSVALLLLWMIVPLGMTLYFSLIRYNL-LYPGEN----QFVGLENFTYFITDSGFLP 70
Query: 76 AFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWK-F 134
T + V + + + V+ G+ +S L + G+ I R LLI P+ + +WK
Sbjct: 71 GATNTLLLVGSVLLISVVFGVLISALLEASEFLGRGIVRVLLISPFFIMPTVGALIWKNL 130
Query: 135 MFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPD 194
+F PV G + + K G + P +W+ + L++ II W PF + ++ A+QS+
Sbjct: 131 IFHPVSGILAAVWKFFG-AEPVDWL--AHYPLLSIIIIVSWQWLPFAILLLMTAMQSLDQ 187
Query: 195 TLIEAAIIDGANYWQRFRHVILPTVSKPIAFATIL 229
EAA +DGA F H+ LP +++PIA ++
Sbjct: 188 EQKEAARLDGAGAIAIFWHLTLPHLARPIAVVVMI 222
>pir||B69588 L-arabinose transport (integral membrane protein) araP - Bacillus
subtilis >gi|1770020|emb|CAA99593.1| (Z75208)
hypothetical protein [Bacillus subtilis]
>gi|2635339|emb|CAB14834.1| (Z99118) integral membrane
protein [Bacillus subtilis]
Length = 313
Score = 91.3 bits (223), Expect = 1e-17
Identities = 76/295 (25%), Positives = 133/295 (44%), Gaps = 31/295 (10%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
A + P + +FL F L+PII ++F G + FVGL N+ L++
Sbjct: 31 APYLFTAPFVLSFLVFFLYPIISVFIMSFQRIL--------PGEVSFVGLSNYT-ALNNP 81
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
F +A T + ++ + + V + L++ NSK V+ + I+++ L IP L S V
Sbjct: 82 TFYTALWNTLEYTFWTLIVLIPVPLLLAIFLNSKLVKFRNIFKSALFIP----ALTSTIV 137
Query: 132 WKFMFDPVFGPI-----NQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVIT 186
+F +FG + N +L +G S P NW+N+ + ++ W +
Sbjct: 138 AGIIFRLIFGEMETSLANSILLKLGFS-PQNWMNNEHTGMFLMVLLASWRWMGINILYFL 196
Query: 187 AALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY-- 244
A LQ+VP L EAA IDGAN ++F H+ LP + + ++ F+ F Y+
Sbjct: 197 AGLQNVPKELYEAADIDGANTMKKFLHITLPFLKPVTVYVLTISIIGGFRMFEESYVLWQ 256
Query: 245 -----NAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
N GL ++ G A G A+ ++ +V+ + I++K++
Sbjct: 257 NNSPGNIGLTLVGYLYQQGL-----AYNEMGYGAAIGIVLLIVILVVSLISLKLS 306
>emb|CAA61935.1| (X89810) putative integral membrane protein [Bacillus subtilis]
Length = 313
Score = 91.3 bits (223), Expect = 1e-17
Identities = 76/295 (25%), Positives = 133/295 (44%), Gaps = 31/295 (10%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
A + P + +FL F L+PII ++F G + FVGL N+ L++
Sbjct: 31 APYLFTAPFVLSFLVFFLYPIISVFIMSFQRIL--------PGEVSFVGLSNYT-ALNNP 81
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
F +A T + ++ + + V + L++ NSK V+ + I+++ L IP L S V
Sbjct: 82 TFYTALWNTLEYTFWTLIVLIPVPLLLAIFLNSKLVKFRNIFKSALFIP----ALTSTIV 137
Query: 132 WKFMFDPVFGPI-----NQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVIT 186
+F +FG + N +L +G S P NW+N+ + ++ W +
Sbjct: 138 AGIIFRLIFGEMETSLANSILLKLGFS-PQNWMNNEHTGMFLMVLLASWKWMGINILYFL 196
Query: 187 AALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY-- 244
A LQ+VP L EAA IDGAN ++F H+ LP + + ++ F+ F Y+
Sbjct: 197 AGLQNVPKELYEAADIDGANTMKKFLHITLPFLKPVTVYVLTISIIGGFRMFEESYVLWQ 256
Query: 245 -----NAGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
N GL ++ G A G A+ ++ +V+ + I++K++
Sbjct: 257 NNSPGNIGLTLVGYLYQQGL-----AYNEMGYGAAIGIVLLIVILVVSLISLKLS 306
>pir||A72756 probable multiple sugar-binding transport system permease protein
APE0038 - Aeropyrum pernix (strain K1)
>gi|5103426|dbj|BAA78947.1| (AP000058) 265aa long
hypothetical multiple sugar-binding transport system
permease protein [Aeropyrum pernix]
Length = 265
Score = 91.3 bits (223), Expect = 1e-17
Identities = 57/189 (30%), Positives = 91/189 (47%), Gaps = 2/189 (1%)
Query: 96 IGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSIGISN- 154
+GL L Y KY G I + ++ I +P++ + +FMFD G + + K++G+
Sbjct: 61 LGLFLAYLLKYTFGSSIVKTIVFIGMVIPMVVGGLIVRFMFDEYVGVVPLVFKALGVDFL 120
Query: 155 PPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHV 214
W N P + L+L + VWL F +TV +AAL S+P + IEAA IDGA +W F +
Sbjct: 121 AKTWTNYPQLSLLSLILGSVWLWTGFSLTVYSAALGSIPSSFIEAARIDGAGHWHIFWKI 180
Query: 215 ILPTVSKPIAFATILTSAASFQYFMVPYLYN-AGLFEDKFILLYGFRKAFGATPHYGRAT 273
+ P V ++T + F + Y+ G +L + Y A+
Sbjct: 181 VFPLVRPATIIVVVMTMLWDLKIFDIVYVATLGGPGGSSNVLALVMYQYMARALDYQAAS 240
Query: 274 AVMVIATMV 282
AV VI T++
Sbjct: 241 AVAVILTLL 249
>dbj|BAB04621.1| (AP001510) L-arabinose transport system (permease) [Bacillus
halodurans]
Length = 316
Score = 91.3 bits (223), Expect = 1e-17
Identities = 73/287 (25%), Positives = 139/287 (47%), Gaps = 13/287 (4%)
Query: 11 IAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSD 70
+ VLI P I +F+ + +P + +I ++F P E + FVGL N+ IL+
Sbjct: 32 VVPYVLISPFILSFIVLSFYPTVQAIVMSFQRV----LPSE----VTFVGLWNYSRILNP 83
Query: 71 EKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT 130
F +A + T ++ +V + V + + ++L NSK V+ ++++R L +P ++ +
Sbjct: 84 TFF-TALQNTTTYMILTVVILVSIPMLFAVLLNSKVVKFRILFRTALFLPALTSVIVAGM 142
Query: 131 VWKFMFDPVFGPI-NQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAAL 189
V++ MF + NQ+L IG+ + W + + + ++ W + AAL
Sbjct: 143 VFRLMFSESDTAVANQILNWIGLESV-EWRYNAWSGMFLMVVLASWRWMGINILYFLAAL 201
Query: 190 QSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY-NAGL 248
Q+VP L EAA IDGAN Q+F +V LP + F T ++ F+ F +++ AG
Sbjct: 202 QNVPKELYEAADIDGANVVQKFFYVTLPFLKPVTIFVTTISVIGGFRMFEESFVFWEAGS 261
Query: 249 FEDKFILLYGFRKAFGATPH-YGRATAVMVIATMVLAIYMYINVKIT 294
+ + + G+ G + G A+ V+ +++ + + +T
Sbjct: 262 PGNIGLTIVGYLYQEGIQQNDMGFGAAIGVVLMLIIFVISITQLYLT 308
>pir||C71243 hypothetical protein PH0205 - Pyrococcus horikoshii
>gi|3256591|dbj|BAA29274.1| (AP000001) 312aa long
hypothetical protein [Pyrococcus horikoshii]
Length = 312
Score = 90.1 bits (220), Expect = 3e-17
Identities = 84/312 (26%), Positives = 143/312 (44%), Gaps = 20/312 (6%)
Query: 6 MKKTTIAALVLIL-PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENF 64
M + AL L P + F L P++ ++Y++FT + N+ VE+ FVG N+
Sbjct: 1 MSNDKVRALSFFLSPMLLMVALFYLIPLVLTVYISFTGMR--NWNVERY-LGDFVGAYNY 57
Query: 65 KWILSDEKFRSAFK----WTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIP 120
+ + K+ +FK T +FV ++ + VL G+GL+L + I+R L ++P
Sbjct: 58 ERLFHMFKYDPSFKAVVLTTIVFVMITLIINVLGGLGLALGSFFMSEKPSTIFRLLWLLP 117
Query: 121 WALPLLFSITVWKFMFD-PVFGPINQLLKSIGISNPP-NWIND-PFWAFLALNIIEVWLA 177
P+ VW + F G +N +L +G N P W P+ A+ + + +
Sbjct: 118 RMSPIAVYSLVWYYFFHGSEIGTLNAILMKLGFINEPIPWGQIVPWGAWSIIIFVNGLVG 177
Query: 178 YPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPI------AFATILTS 231
F M V T+AL +P L+ AA +DGA+ WQ + ++LP + F ++LT+
Sbjct: 178 VSFGMIVFTSALNQIPKELVIAARVDGASAWQISKRILLPLMKWHFLYVLTWQFLSLLTT 237
Query: 232 AASFQYFMVPYLYNAGLFEDKFILLYGFRKAFG-ATPHYGRATAVMVIATMVLAIYMYIN 290
+ L N + LY F AFG G A A VI +++ + I
Sbjct: 238 YPHLFLLVEWDLVNRDY--GTTLALYVFNTAFGRGEQDQGLAAAAAVILSILGIVGGMIT 295
Query: 291 VKITRLQEGAKE 302
+K+ + +E K+
Sbjct: 296 LKVLKFEEMIKK 307
>pir||T37228 probable sugar transport system permease protein - Streptomyces
coelicolor >gi|3559968|emb|CAA20606.1| (AL031514)
putative sugar transport system permease protein
[Streptomyces coelicolor A3(2)]
Length = 324
Score = 90.1 bits (220), Expect = 3e-17
Identities = 66/275 (24%), Positives = 125/275 (45%), Gaps = 13/275 (4%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+ +L + + F P+ IY +FT+ G P +VG EN+ I + +
Sbjct: 47 LFLLAPLALLITFTYVPVGNMIYYSFTDWD-GVSPDRD-----YVGAENYTEIFTRPELL 100
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
F ++ ++A SV V+ ++L S +R + +++ +L P+ + + V+ +
Sbjct: 101 RVFAVSFYYLAASVVQIVIALYFAAVL--SFDLRFRNLFKGILFFPYLINGVAIGFVFLY 158
Query: 135 MFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPD 194
F G ++ +L G W+ P A ++ + VW + A+QS+P
Sbjct: 159 FFQDG-GTLDSVLSWFGAGTDHAWLGSPESANTSMAGVSVWRFTGLNFVLFLGAIQSIPG 217
Query: 195 TLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFEDKFI 254
L EAA +DGA W++FRH+I P++ ++ + IL + S F +PY+ G E
Sbjct: 218 ELYEAAQLDGAGRWKQFRHIIAPSIRPVLSLSVILAISGSLSVFEIPYIMTGGATETSTF 277
Query: 255 LLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYI 289
++ + AF + + A ++LAI + I
Sbjct: 278 VIQTVKYAF----QFNKTGLASACAVVLLAIILLI 308
>pir||T03552 maltose transport inner membrane protein - Rhodobacter capsulatus
>gi|3128353|gb|AAC16205.1| (AF010496) maltose transport
inner membrane protein [Rhodobacter capsulatus]
Length = 290
Score = 89.7 bits (219), Expect = 4e-17
Identities = 65/219 (29%), Positives = 114/219 (51%), Gaps = 10/219 (4%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
AA ++I P + L + + P+ +++ + + + + G F GL+N+++ L+D
Sbjct: 9 AARLMISPAVLLLLGWMIIPLAMTLWFS-----MQRYNLLMPGMGGFTGLDNYRYFLTDP 63
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
F A + T + V + + L G+ L+LL + + G+ I R L+I P+ + S V
Sbjct: 64 AFFDAIRNTLVLVLGVLAITTLGGLLLALLLDQPFW-GQGILRVLVIAPFFVMPTVSALV 122
Query: 132 WKFMF-DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
WK MF +PV G L KS G+ P +++ A + L + WL PF ++ ALQ
Sbjct: 123 WKNMFLNPVNGLFAHLAKSFGLQ-PYDFLAQSPLASVVLIVAWQWL--PFATLILLTALQ 179
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATIL 229
S+ +EAA +DGA + RF HV+LP +++ I ++
Sbjct: 180 SLDSEQLEAAEMDGAGPFARFFHVMLPHLARAITVVILI 218
>pir||T30266 suger transport protein protein - Streptomyces lividans
>gi|3342711|gb|AAC46448.1| (U22894) integral membrane
protein [Streptomyces lividans]
Length = 231
Score = 89.3 bits (218), Expect = 5e-17
Identities = 52/193 (26%), Positives = 97/193 (49%), Gaps = 10/193 (5%)
Query: 8 KTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWI 67
K + A ++ + F FF+ +P++ +LAF G + +VGLEN + +
Sbjct: 36 KRNLTAHGFLIGAVLCFAFFSWYPMVREFFLAFQKTDQGE--------VSWVGLENLETV 87
Query: 68 LSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLF 127
+D F A++ T +F ++ L V ++++ N + GK R L+ +P LP +
Sbjct: 88 FNDPAFWQAWRNTALFTVLALVLGFAVPFVVAIVIN-ELRHGKGYLRLLVYLPVMLPPVA 146
Query: 128 SITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITA 187
S+ ++K+++DP +G +N++ G+ W+ DP + L++ I W+ + A
Sbjct: 147 SVLLFKYLYDPGYGMLNEVFGFFGLPE-QQWLQDPDLSMLSVVIASTWMNMGGAALIYLA 205
Query: 188 ALQSVPDTLIEAA 200
ALQ +P L EAA
Sbjct: 206 ALQGIPGELYEAA 218
>gb|AAK43167.1| Arabinose ABC transporter, permease [Sulfolobus solfataricus]
Length = 285
Score = 88.5 bits (216), Expect = 9e-17
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 19/287 (6%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
A+++ +PG F F ++ + ++Y + N L N F GL ++ + S+
Sbjct: 5 AILMSIPGFI-FAAFLIYLLALNVYFSLLNWSLFNLQPS------FAGLGTYQTLFSEYF 57
Query: 73 FRSAFKWTWIFVATSVTLKVLVGI-GLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
F A T ++ +V + ++GI G +LY K + IY ++ + P A+P
Sbjct: 58 FSLAVTHTIVYTIAAVAIGNILGILGAGILYFLKSNTRRAIYLSVFLYPLAVPSSTYAIT 117
Query: 132 WKFMFDPVFGPINQLLKSIGISNPPN--WINDPFWAFLALNIIEVWLAYPFMMTVITAAL 189
W+++F+P G IN +L+ I + PN W+ + + IIE W + A+
Sbjct: 118 WQWLFNPQTG-INLVLR---IFHFPNIIWLTTQPTIYAGMIIIETWAYTGLAVLFFLASF 173
Query: 190 QSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLF 249
SV ++IEAA IDGAN + +ILP + +T L SF+ F VP+ G
Sbjct: 174 MSVDKSIIEAAKIDGANNFYLLFRIILPNSMNGLIVSTALLFLFSFRIFTVPFTI-GGPT 232
Query: 250 EDKFILLYGFRKAFGATPHYGRATA----VMVIATMVLAIYMYINVK 292
+ L + +T ++ ++A V +IA +V+ Y + +K
Sbjct: 233 NPNMMSLVEYIYILFSTEYFSLSSALSSLVALIAAVVIIPYAILGLK 279
>emb|CAC11828.1| (AL445065) probable sugar ABC transporter, permease protein
[Thermoplasma acidophilum]
Length = 311
Score = 88.5 bits (216), Expect = 9e-17
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 20/279 (7%)
Query: 14 LVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKF 73
++ ++P + + F +P IYS ++ + + FVG N+ +++ D F
Sbjct: 32 IIFVIPLMIFVIVFTFFPAIYSFAISLFHYDPFFHDIH------FVGFSNYLYVIRDPAF 85
Query: 74 RSAFKWTWIFVATSVTLKVLVGIGLSLLYN--SKYVRGKMIYRALLIIPWAL-PLLFSIT 130
+ I+ A VT++ + G +LL+N SK R + RA++ IP + P+ SI
Sbjct: 86 IKSLINVLIYTAVVVTVQTFLAFGYALLFNTASKISR---VARAIVFIPAVVSPVSMSII 142
Query: 131 -VWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAAL 189
+W F G +N L GI P NW+ +AF A+ + ++ P+ M V +A L
Sbjct: 143 FIWVFSNT---GLVNYFLSFFGIP-PHNWLFSTVYAFPAIMAMNIFTTAPYFMIVYSAGL 198
Query: 190 QSVPDTLIEAAIIDG-ANYWQRFRHVILPTVSKPIAFATILTSAASFQYF-MVPYLYNAG 247
Q++P +++AA IDG + +RFR+V P + IL + Q F + + + G
Sbjct: 199 QAIPQEVMDAAKIDGLKSGLRRFRYVYFPLMRFSTILVVILGLTGAMQLFDQIYVITDGG 258
Query: 248 LFEDKFI-LLYGFRKAFGATPHYGRATAVMVIATMVLAI 285
++ L+Y + + F G A A + +++ +
Sbjct: 259 PARATYVPLMYIYNRTFVYVGDIGLAAAASFVLFVIILV 297
>pir||C72279 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981788|gb|AAD36309.1|AE001779_11
(AE001779) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 281
Score = 88.2 bits (215), Expect = 1e-16
Identities = 79/295 (26%), Positives = 138/295 (46%), Gaps = 26/295 (8%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
+ +LILP + + +P+ + LAFT+ + F+G NFK ++ +
Sbjct: 7 SFLLILPAVLYLVLLMGYPLFETFRLAFTSDE------------GFLG--NFKRLVENGG 52
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
F A K T + A V L+++ +GL+L N K+ +G + IP AL + + +
Sbjct: 53 FWGAMKNTILLTAVIVPLQLIFALGLALFVNQKF-KGYTTVLYFIAIPLALSDVTAALMS 111
Query: 133 KFMFDPVFGPINQLLKSIG-ISNPPNWINDPFWA--FLALNIIEVWLAYPFMMTVITAAL 189
+F P G +N++L ++ I P + F A F + + EVW A P + ++ A L
Sbjct: 112 YTIFSPN-GYLNKILMNLHLIERPIYFFGYMFKAREFWVIVLTEVWRATPLVFIILLAGL 170
Query: 190 QSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLF 249
QS+ +EAA + G + W++F +ILP + I A +L + +FQ F V +L L
Sbjct: 171 QSINKEYLEAADLFGFSRWKKFTKIILPLLKPSIMSALLLRTLFAFQIFGVVWL----LA 226
Query: 250 EDKFILLYG---FRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGAK 301
+L G + F P A A+++ ++ + YI + EGA+
Sbjct: 227 GRDIPVLAGETYYWYTFMNDPKMASAYALVIALVTIVVSWFYITFLSAKHLEGAR 281
>pir||T35671 probable transmembrane transport protein - Streptomyces coelicolor
>gi|2661678|emb|CAA15783.1| (AL009199) probable
transmembrane transport protein [Streptomyces coelicolor
A3(2)]
Length = 353
Score = 87.8 bits (214), Expect = 2e-16
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 24/296 (8%)
Query: 21 ITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFKWT 80
+ F+ F L P +I+ T+ + G P FVG +NF + D+ F A +
Sbjct: 45 LAIFVIFVLIPFGQAIFWGMTDWR-GFSP-----DYNFVGFDNFTKMFQDDIFLKALRNV 98
Query: 81 WIFVA--TSVTLKVLVGIGLSLLYNS------KYVRGKMIYRALLIIPWALPLLFSITVW 132
+ A VTL + +G+ +++ + +RG YR + P+ +P + +W
Sbjct: 99 ALLAAFVPLVTLTLALGVAVAITLGGPSKGPVRGIRGASFYRIISFFPYVVPAIIVGLIW 158
Query: 133 KFMFDPVFGPINQLLKSIGISNPPN--WINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
M+DP G +N +L +G+ W+ + A A+ + VW F + AA++
Sbjct: 159 AQMYDPNAGLLNGVLTGLGLDQFDTFAWLGEKAAAMPAVMFVIVWGLVGFYAVLFIAAIK 218
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYF-----MVPYLYN 245
VP L EAA IDGA ++ + LP + + A I A+ F MVP N
Sbjct: 219 GVPGELYEAAKIDGAGRFRTTISITLPAIRDSVQTAYIYLGIAALDAFVYVQAMVP---N 275
Query: 246 AGLFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGAK 301
G + A +G ATA+ V+ V ++ + + RL G +
Sbjct: 276 GGPDNSTLTISQRLFNVAFAKQQFGYATAMGVVLAAVTLVFAALVFLVNRLTGGGE 331
>pir||A83353 probable binding-protein-dependent maltose/mannitol transport
protein PA2339 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9948375|gb|AAG05727.1|AE004660_3
(AE004660) probable binding-protein-dependent
maltose/mannitol transport protein [Pseudomonas
aeruginosa]
Length = 310
Score = 86.2 bits (210), Expect = 4e-16
Identities = 62/234 (26%), Positives = 113/234 (47%), Gaps = 9/234 (3%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+L+ P + L + + P+ ++Y + L +P E A FVGLENF + ++D F
Sbjct: 29 LLVSPSVALLLLWMIVPLGMTLYFSLIRYNL-LYPGENA----FVGLENFTFFVTDAGFL 83
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWK- 133
T + V + + + V G+ ++ L + G+ R LLI P+ + S +WK
Sbjct: 84 PGALNTLLLVGSVLAISVAFGVLIAALLEAGEFFGRGAVRVLLISPFFIMPTVSALLWKN 143
Query: 134 FMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVP 193
+F PV G + + + G + P +W+ + L++ +I W PF + ++ A+QS+
Sbjct: 144 LIFHPVSGILAAVWRLFG-AEPVDWL--AHYPLLSIILIVSWQWLPFAILILMTAMQSLD 200
Query: 194 DTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
EAA +DGA F H+ LP +++PIA ++ + F + +G
Sbjct: 201 QEQKEAARLDGAGPLAIFWHLTLPHLARPIAVVLMIETIFLLSVFAEIFTTTSG 254
>dbj|BAB04513.1| (AP001509) sugar transport system (permease) (binding protein
dependent transporter) [Bacillus halodurans]
Length = 312
Score = 86.2 bits (210), Expect = 4e-16
Identities = 73/242 (30%), Positives = 122/242 (50%), Gaps = 23/242 (9%)
Query: 14 LVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTL---KFVGLENFKWILS- 69
L+++LPG+ L P+ I +AF + + P +L ++VGLENF+++ S
Sbjct: 18 LLMVLPGLIWLLVLKYIPMFGQI-IAFKDFRF--HPDGFFASLYHSEWVGLENFQFLFST 74
Query: 70 DEKF---RSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLL 126
++ F R+ + +F+ + L V V I +S L N K + IY+ ++ P L +
Sbjct: 75 NDAFIITRNTVLYNVVFIVLGLVLAVAVAIIISELTNQKLAK---IYQTGMLFPHFLSWV 131
Query: 127 FSITVWKFMFDPVF-GPINQLLKSIGISNPPNWINDP-FWAFLALNIIEVWLAYPFMMTV 184
++ + F F + G N +L +I I +P W N+P +W + + I + W F V
Sbjct: 132 V-VSYFVFTFLSIDRGLFNTILSAINI-DPVAWYNEPGYWPYFIITISQ-WKGVGFSSIV 188
Query: 185 ITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQ-----YFM 239
AA+ ++ T EAAIIDGA+ WQ+ RHV +P + I TIL + F ++
Sbjct: 189 YLAAIVAIDRTYYEAAIIDGASKWQQIRHVTIPMIMPLIIILTILNIGSIFSADFGLFYQ 248
Query: 240 VP 241
VP
Sbjct: 249 VP 250
>pir||T37130 probable transport system integral membrane protein - Streptomyces
coelicolor >gi|5738807|emb|CAB52981.1| (AL109950)
putative integral membrane permease [Streptomyces
coelicolor A3(2)]
Length = 319
Score = 85.0 bits (207), Expect = 1e-15
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 18/276 (6%)
Query: 19 PGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFK 78
P + F L P +++IY +F + T F +N+ SD + +
Sbjct: 48 PAVLLVALFLLAPFVWTIYRSFFS---------DTRTSPFSWFDNYSLFASDPALSRSIQ 98
Query: 79 WTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDP 138
T ++V +V L ++G+ ++ + N+ R + R +++P+AL VW FM
Sbjct: 99 NTLMWVVGTVALPFVLGLAIACMTNAG--RFSRLARLCVVLPYALSGSAVAVVWNFMLT- 155
Query: 139 VFGPINQLLKSIGISN-PPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLI 197
G +NQ+L ++G+ + W+ + + + W A + + LQS+P +
Sbjct: 156 TDGAVNQVLTALGLDSLAQGWLLTWPGNTVVMILANAWQATGVAVILFLVGLQSIPPETL 215
Query: 198 EAAIIDGANYWQRFRHVILPTVSKPIAFATI----LTSAASFQYFMVPYLYNAGLFEDKF 253
EA +DGA+ WQ+FRH++LP + +P++ I + SF V G +
Sbjct: 216 EAGALDGASGWQQFRHIVLPQL-RPVSIIVIGMSLVNGLKSFDLIWVLTQGGPGRATETL 274
Query: 254 ILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYI 289
+ P G A AV++ ++ A ++Y+
Sbjct: 275 AVSMYNETFLELRPGAGAAIAVVLTVIVLAASWLYL 310
>dbj|BAB07565.1| (AP001520) ABC transporter (permease) [Bacillus halodurans]
Length = 328
Score = 84.7 bits (206), Expect = 1e-15
Identities = 64/248 (25%), Positives = 121/248 (47%), Gaps = 24/248 (9%)
Query: 58 FVGLENFKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALL 117
F GL+N+ ++ D +F++ + T F + +++G G+++L + K +R + ++R +
Sbjct: 74 FAGLKNYLFLFQDFRFQADLRNTLFFTILFIGAVIVLGQGIAILLDQK-IRQESLFRNIF 132
Query: 118 IIPWALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFW------------- 164
P AL + + VW+++ +P G +N L+ G+ + W D
Sbjct: 133 FFPMALSFVVTGVVWQWLLNPSTG-VNLFLERFGLDS--RWYTDTTIVPAISLGKIEFGL 189
Query: 165 --AFLALNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKP 222
A +A+ I VW F + + A L+ +PD + EAA +DGAN +Q + VILP + +P
Sbjct: 190 PVAMIAVVIAAVWQMTGFAVAMYLAGLRGIPDDVREAARMDGANEFQVYWKVILPLL-RP 248
Query: 223 IAFATILTSA-ASFQYFMVPYLYN--AGLFEDKFILLYGFRKAFGATPHYGRATAVMVIA 279
I + I+ A S + F + + F +Y F F YG+ +A+ +I
Sbjct: 249 ITMSVIIIMAHISLKIFDLIFAMTGPGANFVTDVPGVYMFETTFRGN-FYGQGSAIAIIM 307
Query: 280 TMVLAIYM 287
+ +AI++
Sbjct: 308 LVSVAIFI 315
>emb|CAB61178.1| (AL132973) putative binding protein dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 328
Score = 83.5 bits (203), Expect = 3e-15
Identities = 74/293 (25%), Positives = 132/293 (44%), Gaps = 29/293 (9%)
Query: 7 KKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQ---LGNFPVEKAGTLKFVGLEN 63
++ AA VL+ P + L P+ ++YL+F + LG P + FVGL +
Sbjct: 34 RRQLTAAGVLMTPFFALLVTVFLIPVGTAVYLSFFSDDQPGLGFGPERQV----FVGLRS 89
Query: 64 FKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWAL 123
+ +L+D F ++ + L V+ + L+LL +S VR + + + L +P A+
Sbjct: 90 YAAVLTDPTFLGGLGTVALYCLIYIPLMVVGALALALLLDSGVVRLRGLAQLGLFLPHAV 149
Query: 124 PLLFSITVWKFMFDPVFGPINQL-------LKSIGISNP-PNWINDPFWAFLALNIIEVW 175
P + + +W +++ P P+ +L + +G+ P+ +N W+ L N
Sbjct: 150 PGIIAALIWLYLYTPGISPVIELFAKGDITIDFLGVHTVIPSIVNIALWSNLGYN----- 204
Query: 176 LAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASF 235
M V AALQ+VP +IEA+++DGA + V P V I I T +
Sbjct: 205 ------MVVFYAALQAVPREVIEASVVDGAGPVRTALQVKTPLVRASIVMVAIFTLIWAL 258
Query: 236 QYFMVPYL--YNAGLFEDKFI-LLYGFRKAFGATPHYGRATAVMVIATMVLAI 285
Q F P L ++ + +F +Y + AF + A A +V+ +A+
Sbjct: 259 QLFTEPMLLSQSSPMINSRFSPSMYIYDAAFTRNNYSLAAAASVVLLVCTIAL 311
>pir||C71123 probable sugar transport system permease protein - Pyrococcus
horikoshii >gi|3257162|dbj|BAA29845.1| (AP000003) 313aa
long hypothetical sugar transport system permease
protein [Pyrococcus horikoshii]
Length = 313
Score = 83.1 bits (202), Expect = 4e-15
Identities = 60/251 (23%), Positives = 115/251 (44%), Gaps = 26/251 (10%)
Query: 3 EDEMKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLE 62
E K +A LI + + F + +I++ YL+F F + G + FVGL
Sbjct: 10 EKAKNKEIVAGYTLISMAVFLNILFGYFAMIFAFYLSF-------FEWDYIGKMHFVGLR 62
Query: 63 NFKWILSD------------EKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGK 110
NF+ + D F + K T ++ V + ++ I L+ N K ++G+
Sbjct: 63 NFEIMFRDLIRGMKGAPYLLSPFYTGLKNTLLYTLIVVPTQTILAIILAAFANQK-IKGQ 121
Query: 111 MIYRALLIIPWALP--LLFSITVWKFMFDPVFGPINQLLKSIGIS-NPPNWINDPFWAFL 167
++ +P ++ I +W FM + G IN +L + +P +WI+D +
Sbjct: 122 QFFKVSYFLPATTSSVIISLIFIWLFMRN---GFINYVLVHVIPGFHPIDWIHDRRYLLY 178
Query: 168 ALNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFAT 227
A++++ +W M AA+Q++P + EAA++DGA +RF ++ +P + I +
Sbjct: 179 AISLVAIWGTSGHFMVSFLAAMQAIPREIYEAAMLDGAGPIRRFIYITIPMLRPMIVYVV 238
Query: 228 ILTSAASFQYF 238
++ + Q F
Sbjct: 239 VMGLIGALQMF 249
>pir||G83248 probable permease of ABC sugar transporter PA3189 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9949307|gb|AAG06577.1|AE004742_13 (AE004742)
probable permease of ABC sugar transporter [Pseudomonas
aeruginosa]
Length = 310
Score = 83.1 bits (202), Expect = 4e-15
Identities = 54/219 (24%), Positives = 117/219 (52%), Gaps = 11/219 (5%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+++ P + LF I +++ L+FTN++ + K+ GL ++ + ++++
Sbjct: 31 LVLAPSVVVVLFCMYGYIGWTLLLSFTNSRF-------MPSYKWAGLSQYQRLWDNDRWW 83
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
A K +F + + + +++G+ L++L + + +R + R L + P AL ++ + T WK+
Sbjct: 84 VASKNLLLFGGSFIAICLVLGVFLAVLLDQR-IRREGFIRTLYLYPMALSMIVTGTAWKW 142
Query: 135 MFDPVFGPINQLLKSIGISNPP-NWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVP 193
+ +P G +++LL+ G +W+ DP L I VW A F+M + A L+ V
Sbjct: 143 LLNPGLG-LDKLLRDWGWEGFRFDWLVDPERVVYCLVIAAVWQASGFVMALFLAGLRGVD 201
Query: 194 DTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSA 232
++ AA +DGA+ + ++LP++ +P+ F+ ++ A
Sbjct: 202 PAIVRAAQVDGASLPTIYLRIVLPSL-RPVFFSALMILA 239
>gb|AAC45767.1| (AF018073) sorbitol/mannitol transport inner membrane protein; SmoF
[Rhodobacter sphaeroides]
Length = 290
Score = 81.9 bits (199), Expect = 9e-15
Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 10/219 (4%)
Query: 12 AALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
AA ++I P + + + P+ ++Y +F L G F G +N+ + L+D
Sbjct: 9 AARLMISPAVILLFLWMIVPLSMTLYFSFLRYNL-----LMPGMESFTGWDNYYYFLTDP 63
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV 131
F +A T + V + + V+ G+ L+LL + + G+ I R L+I P+ + S V
Sbjct: 64 AFSAALTNTILLVVGVLLITVVGGVLLALLLDQPFW-GQGIVRVLVIAPFFVMPTVSALV 122
Query: 132 WKFMF-DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
WK MF +PV G + + +G+ P + + I W PF ++ ALQ
Sbjct: 123 WKNMFMNPVNGMFAHIARGLGLPPFDFLSQAPLASIIG---IVAWQWLPFATLILLTALQ 179
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATIL 229
S+ +EAA +DGA+ RF H+ +P +++ I ++
Sbjct: 180 SLDREQMEAAEMDGASALDRFIHITVPHLTRAITVVVLI 218
>gi|10954681 probable mikimopine transporter gene~similar to motC gene
[Agrobacterium rhizogenes] >gi|8918681|dbj|BAA97746.1|
(AB039932) hypothetical ABC-transporter gene~similar to
motC gene [Agrobacterium rhizogenes]
>gi|10567345|dbj|BAB16154.1| (AP002086) probable
mikimopine transporter gene~similar to motC gene
[Agrobacterium rhizogenes]
Length = 283
Score = 81.9 bits (199), Expect = 9e-15
Identities = 79/280 (28%), Positives = 124/280 (44%), Gaps = 20/280 (7%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
+L LP IT F + P+I+ L+F +G+ P + L L N+ L D +
Sbjct: 6 ILFLPAITILAAFFILPLIWVFVLSF----MGSGPTGEV--LNAFTLSNYARFLGDSYYL 59
Query: 75 SAFKWTWIFVATSVT-LKVLVG-IGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
+ W I +A T V++G +G L+ VR + + LI+ LPL ++ V
Sbjct: 60 NDLLWRTIRMAAIATAFSVVIGYLGAFLI-----VRAEPRIQTWLILLVMLPLWVNLVVR 114
Query: 133 KFMFDPVFG---PINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAAL 189
V G P+NQ L +IGI++ P + + ++ I + +A PF++ I L
Sbjct: 115 TLSLMVVLGRTGPVNQFLVAIGITDRPLAL---LYTETSVIIGMIQVAVPFVVMSIYGVL 171
Query: 190 QSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLF 249
QS+P L AA+ GA Q FR V LP I ++L + + F+VP L G
Sbjct: 172 QSIPRQLEHAAMTVGAPPVQAFRRVTLPLSMPGILAGSVLAFGINVESFVVPILLGGGRV 231
Query: 250 EDKFILLYGFRKAFGATPHYGRATAVMVIATMV-LAIYMY 288
+ Y P +++I TMV LA Y +
Sbjct: 232 RFMSVAAYETATVSNNLPFAATIGVILLIVTMVMLAAYQW 271
>gb|AAK41271.1| Maltose transport inner membrane protein [Sulfolobus solfataricus]
Length = 275
Score = 79.6 bits (193), Expect = 4e-14
Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 15/238 (6%)
Query: 6 MKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFK 65
M K + +L+LP + + F +P I ++YL+F + G L N+K
Sbjct: 1 MNKVKLTFFLLVLPALAYVISFAFFPTIEAVYLSFQDPHGG------------FSLYNYK 48
Query: 66 WILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPL 125
LS SA T + ++ +++ +G ++ + + ++ GK + IIP +
Sbjct: 49 E-LSYFNLSSAIINTIVVTIGALAIQLALGFLVASVLSREFF-GKRALSTITIIPMGIAT 106
Query: 126 LFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVI 185
+ + + F+F G N +L S+ N NW + L + I + W P + ++
Sbjct: 107 VVAAVTFSFVFQTSGGYANTILHSLFGLNV-NWYQSSISSLLVVMIADSWKNTPIVALIL 165
Query: 186 TAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYL 243
A + S+P L A+ IDGA +RF ++ LP + I + IL F F +P +
Sbjct: 166 LAGMSSIPKELYYASAIDGAGPIRRFFYITLPNLRSFIGISLILRGVQEFNIFALPLI 223
>sp|Q00750|MSMF_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PERMEASE PROTEIN MSMF
>gi|282318|pir||C42400 membrane protein MsmF -
Streptococcus mutans >gi|153738|gb|AAA26935.1| (M77351)
membrane protein [Streptococcus mutans]
Length = 290
Score = 79.6 bits (193), Expect = 4e-14
Identities = 71/288 (24%), Positives = 134/288 (45%), Gaps = 25/288 (8%)
Query: 16 LILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRS 75
LI+P I +FF +P+ + +F N + + FVG+ N+K +++D KF
Sbjct: 16 LIVPLILQVVFF-YFPMFQGAFYSFINWTGLTYNFD------FVGINNYKILMTDGKFMK 68
Query: 76 AFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFM 135
A +T + + ++++GI ++ N+K ++GK +RA P L L ++K +
Sbjct: 69 AIGFTLVSTLALIVGEIVLGIIIARALNAK-IKGKTFFRAWFFFPAVLSGLTVSLIFKQV 127
Query: 136 FD---PVFGPINQLLKSIGISN-PPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191
F+ P G ++GI + + A +A + +W + + + LQS
Sbjct: 128 FNYGLPAVG------SALGIKFLETSMLGTANGAVIASIFVLLWQGVAMPIILFLSGLQS 181
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFED 251
+P ++EAA IDGA+ Q F V LP + I+ I+ A F + G +
Sbjct: 182 IPSEIVEAAAIDGADSKQTFWSVELPYLLPSISMVFIMALKAGLTAFDQIFALTGGGPNN 241
Query: 252 KF----ILLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITR 295
+L+Y + AF + YG A A+ +I +++ I + +K+++
Sbjct: 242 STTSLGLLVYNY--AFKSN-QYGYANAIALILFIIIGIVSVLQIKLSK 286
>emb|CAB91123.1| (AL355913) putative transport system integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 346
Score = 79.2 bits (192), Expect = 6e-14
Identities = 67/219 (30%), Positives = 106/219 (47%), Gaps = 6/219 (2%)
Query: 14 LVLILPGITAFLFFNLWPIIYSIYLAFT--NAQLGNFPVEKAGTLKFVGLENFKWILSDE 71
L++ LP + L FN PI+ ++ +AF + L + + +VGLENF+ I D
Sbjct: 53 LLMTLPAVLLVLLFNYVPILGNV-VAFQEYDPYLSDNGIVSILHSPWVGLENFQRIFEDS 111
Query: 72 KFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKY-VRGKMIYRALLIIPWALPLLFSIT 130
F ++ + T + + L + I L+LL NS R + I +A+L +P + I
Sbjct: 112 AFWNSVRNTLVLFLLQLVLYFPIPIALALLINSVVRPRVRAISQAILYLPHFFSWVLVIA 171
Query: 131 VWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQ 190
V++ + G ++QLL+ G + + FL + VW + + V AAL
Sbjct: 172 VFQQLLGGA-GLLSQLLRDHGYDGLGVMTDPDTFKFL-VTAQSVWKDAGWGIIVFLAALA 229
Query: 191 SVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATIL 229
SV L EAA +DGAN W+R HV LP + IA +L
Sbjct: 230 SVSPDLYEAAAMDGANRWRRMWHVTLPALRPVIALLLVL 268
>pir||D72543 probable sugar transport system permease protein APE1632 -
Aeropyrum pernix (strain K1) >gi|5105320|dbj|BAA80633.1|
(AP000062) 288aa long hypothetical sugar transport
system permease protein [Aeropyrum pernix]
Length = 288
Score = 78.4 bits (190), Expect = 1e-13
Identities = 58/241 (24%), Positives = 118/241 (48%), Gaps = 16/241 (6%)
Query: 6 MKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFK 65
++ + A +L+ P I F +PII S +AF K G++ F ++
Sbjct: 7 LQDNRVKAWLLLSPTILYLAVFIAYPIIDSFRIAFV----------KNGSISFEAVDFLL 56
Query: 66 WILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPL 125
+ E F SA K+T++ + + L+ + +L ++ RG+ +L++P AL
Sbjct: 57 YSPLSE-FWSALKYTFLLAILVIPTETLLALTAVILLFKRF-RGRDAVIYVLVMPLALSD 114
Query: 126 LFSITVWKFMFDPVFGPINQLLKSIGISNPPNWI---NDPFWAFLALNIIEVWLAYPFMM 182
L + +W M G +N+LL ++G+ + P + + FLA+ + EVW + +
Sbjct: 115 LAAGLIWYSMLTGK-GFLNKLLLNMGLISDPIIFFGYENRWLTFLAVYLAEVWRSTAIVF 173
Query: 183 TVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPY 242
++ A Q + + EAA + GA+++ + RH+++P + + A ++ + +FQ F V +
Sbjct: 174 VILFAGAQLINKEVFEAAEVFGASFYVKLRHILIPMIKPSLQAALLIRTLFAFQVFAVVW 233
Query: 243 L 243
+
Sbjct: 234 I 234
>gb|AAK42958.1| ABC transporter, permease (glucose) [Sulfolobus solfataricus]
Length = 286
Score = 78.0 bits (189), Expect = 1e-13
Identities = 67/286 (23%), Positives = 132/286 (45%), Gaps = 23/286 (8%)
Query: 6 MKKTTIAALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFK 65
MKK TI +L+ P F L+ +I++ ++F N L N FVGLE +
Sbjct: 2 MKKGTI---ILVAP-TAIFSAILLYLVIWNAVMSFMNWSLLN------SKPTFVGLETYS 51
Query: 66 WILSDEKFRSAFKWTWIFVATSVTLKVLVGIGLS-LLYNSKYVRGKMIYRALLIIPWALP 124
++ +F ++ + V + ++GI ++ LLY + + + +++I P ++
Sbjct: 52 IVIRTFQFTNSLLHSIELSVILVVIGNILGIFIAALLYFLNSNKARSTFLSIVIYPLSIS 111
Query: 125 LLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTV 184
+ + +W ++F+ G ++ LL IG+ P W++ F +L ++ VW
Sbjct: 112 MAVNGLIWLWLFNIHIG-VDWLLVRIGLPQFP-WLSSTSTMFPSLVLVSVWAYTGIAALF 169
Query: 185 ITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY 244
A ++ T++EAA +DG + ++ +++P AT L SF+ F +PY+
Sbjct: 170 YLAGFMNIDKTIVEAARLDGTSAFKILYKILIPNSLNSFIIATALLFLFSFRIFDLPYVL 229
Query: 245 NAG-----LFEDKFILLYGFRKAFGATPHYGRATAVMVIATMVLAI 285
+ G L + + Y F ++ +ATAV + T++ I
Sbjct: 230 SGGTTNIFLQTSELYMYYLF-----TVEYFSQATAVATMITLIATI 270
>dbj|BAB05944.1| (AP001514) sugar transport system (permease) [Bacillus halodurans]
Length = 304
Score = 77.6 bits (188), Expect = 2e-13
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 15/280 (5%)
Query: 16 LILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRS 75
+ LP + A + F ++P + I ++FTN F + + +VG ++ + +D
Sbjct: 26 MYLPAVLAVVTFIVYPFLNGIRISFTN--WNGF----SQSFDWVGFAQYERMFTDPTTWL 79
Query: 76 AFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFM 135
K T ++ S L+ L+G+G +LL N +R + I R ++ +P + L +W F
Sbjct: 80 VVKNTLLYGIGSTLLQNLIGLGYALLLNQS-IRMRTITRTIIYLPVIISPLVMGYIWYFF 138
Query: 136 FDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDT 195
F G +N L G P N + +P + + + M + A LQS+
Sbjct: 139 FAYQGGAMNDALTFFGFQ-PLNILGNPAVNPWLIVFVNTYQFVGIAMIIYLAGLQSISKD 197
Query: 196 LIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLY------NAGLF 249
EAA +DGA+ +Q+F+++ LP + I +L + F V NA
Sbjct: 198 YYEAAQLDGASSFQQFKNITLPLLMPSITINVVLNIIGGLKLFDVIIALTGGGPGNASQS 257
Query: 250 EDKFIL-LYGFRKAFGATPHYGRATAVMVIATMVLAIYMY 288
F+ LY R+ G G A +++ +LA+ +
Sbjct: 258 MSTFMYHLYFSRQDAGYAATQGVFMAFIILVLSILALVYF 297
>gb|AAC98811.1| (U75905) putative ABC-type sugar transporter [Pseudomonas putida]
Length = 302
Score = 77.3 bits (187), Expect = 2e-13
Identities = 64/272 (23%), Positives = 133/272 (48%), Gaps = 19/272 (6%)
Query: 32 IIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFKWTWIFVATSVTLK 91
I+++ L+FT + + + GL ++ + ++++ A K +F + +
Sbjct: 40 ILWTFVLSFTTSTF-------LPSYNWAGLAQYQRLFDNDRWWVASKNLAVFGGMFIGIS 92
Query: 92 VLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFMFDPVFGPINQLLKSIG 151
++VG+ L++ + + +R + R + + P AL ++ + T WK++ +P G +++LL+ G
Sbjct: 93 LVVGVILAVFLDQR-IRREGFIRTIYLYPMALSMIVTGTAWKWLLNPGMG-LDKLLRDWG 150
Query: 152 ISN-PPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQR 210
+W+ DP L I VW A F+M + A L+ V ++I AA IDGA+
Sbjct: 151 WEGFRLDWLIDPDRVVYCLVIAAVWQASGFIMAMFLAGLRGVDQSIIRAAQIDGASLPTI 210
Query: 211 FRHVILPTVSKPIAFATILTSA----ASFQYFMVPYLYNAGLFED-KFILLYGFRKAFGA 265
+ V+LP++ +P+ F+ ++ A SF G D + +Y F + G
Sbjct: 211 YLKVVLPSL-RPVFFSAVMILAHIAIKSFDLVAAMTAGGPGYSSDLPAMFMYSFTFSRGQ 269
Query: 266 TPHYGRATAVMVIATM--VLAIYMYINVKITR 295
G A+A++++ + ++ Y+Y ++ R
Sbjct: 270 M-GMGSASAILMLGAIRAIVVPYLYSELRNKR 300
>pir||T36479 probable binding protein dependent transport protein - Streptomyces
coelicolor >gi|5824100|emb|CAB54176.1| (AL110470)
putative binding protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 300
Score = 76.1 bits (184), Expect = 5e-13
Identities = 68/273 (24%), Positives = 128/273 (45%), Gaps = 22/273 (8%)
Query: 16 LILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRS 75
L P + F+ F + P+I L+FT + G + GL +++ +L+D +
Sbjct: 20 LATPALVLFVGFAVIPLIGVFALSFTTW-------DGIGAIHPSGLASWRAVLTDPRLPH 72
Query: 76 AFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITV---- 131
A T++ +A S ++ + I L ++ G+ YRA+L + + +PL+ S
Sbjct: 73 ALWVTFMVMAVSWAVQTPLSILLGT-----FLAGRQRYRAVLGVVYFVPLMLSSAAIAIA 127
Query: 132 WKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQS 191
+K + DP FG + LK +S +W+ P AF + + W PF + +Q
Sbjct: 128 YKALLDPNFG-LGAGLKLPLLSQ--DWLGRPGLAFGVVVFVVSWQFVPFHSLIYQGGVQQ 184
Query: 192 VPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFED 251
+P +L EAA +DGA ++F + LP + + ++ L S +F + ++ G D
Sbjct: 185 IPKSLYEAAQVDGAGRIRQFFSITLPQLKYTVITSSTLMVVGSLTFFDLIFVLTEGGPGD 244
Query: 252 --KFILLYGFRKAFGATPHYGRATAVMVIATMV 282
+ + L +++ F A+ G A+ + VI +V
Sbjct: 245 ATRVLALDMYKRGFQAS-LMGPASVIAVILVLV 276
>emb|CAB56684.1| (AL121596) binding-protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 313
Score = 76.1 bits (184), Expect = 5e-13
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 9/216 (4%)
Query: 15 VLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFR 74
VL +P + +L F + P++ +A + PV F GL+N + +L D F
Sbjct: 35 VLAVPALVWYLVFMVGPLLAIFVIAALHWPGMLQPVS------FAGLDNARVVLDDPVFW 88
Query: 75 SAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKF 134
A + T + +A +V + ++ L Y ++ G + R LL IP + V+
Sbjct: 89 DAVRNTAVQLAVAVPVMIVCAFMLGY-YVAQRPPGHRVIRYLLFIPGLISTPAKAMVFYA 147
Query: 135 MFDPVFGPINQLLKSIGISNPPN-WINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVP 193
P G +N L+S+G+ + + W+ P A L +++W F + A L SVP
Sbjct: 148 ALSPD-GLLNGGLESVGLGSLADAWLASPSTALACLIALDIWAGIGFTAVLFAARLGSVP 206
Query: 194 DTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATIL 229
D L EAA +DGA +W+ V P + + T+L
Sbjct: 207 DELGEAAQLDGAGHWRTMWSVHFPVIRDYVGVVTML 242
>emb|CAC11292.1| (AL445063) trehalose/maltose transporter, inner membrane protein
MalF related protein [Thermoplasma acidophilum]
Length = 280
Score = 75.7 bits (183), Expect = 7e-13
Identities = 65/291 (22%), Positives = 126/291 (42%), Gaps = 21/291 (7%)
Query: 13 ALVLILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEK 72
A +L+LP I L+ P I ++Y G+F T L N+ ++ S
Sbjct: 9 AYILMLPAIIYVLYLAFIPAIEAVY--------GSFHTATGKT----SLYNYNFVFSTFG 56
Query: 73 FRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVW 132
T+I A+++ L+ V ++ L SK RG+ ++ A+ +IP+ + + + ++
Sbjct: 57 TSPIIN-TFIVTASALLLQFTVAFLVASLL-SKPFRGRGVFSAIFLIPFGVATIVTGVIF 114
Query: 133 KFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSV 192
+F G N +L + + P +W + L L + + W P + V+ + + ++
Sbjct: 115 HDIFSTFGGYANTVLLDLHLK-PIDWTGSYGTSLLVLILADSWKNTPIVTLVLLSGMVTI 173
Query: 193 PDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAGLFEDK 252
P L A++DGA RF H+ +P + IA A ++ + F F + L LF
Sbjct: 174 PSDLYAQAMVDGAGPISRFFHITIPNMIGFIAIALMIRGISEFNIFAMALL----LFPHA 229
Query: 253 FI--LLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKITRLQEGAK 301
+ + Y A P AT ++ + A+ M++ + ++ K
Sbjct: 230 LLTTMTYALFDTVNAYPADAGATILLAFVLVFAALVMFMRSRQGKVSSNGK 280
>pir||E69585 sugar transport amyD - Bacillus subtilis >gi|2293307|gb|AAC00385.1|
(AF008220) sugar transporter [Bacillus subtilis]
>gi|2635512|emb|CAB15006.1| (Z99119) amyD [Bacillus
subtilis]
Length = 303
Score = 73.4 bits (177), Expect = 3e-12
Identities = 60/232 (25%), Positives = 100/232 (42%), Gaps = 8/232 (3%)
Query: 16 LILPGITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRS 75
+ +P + + L F ++P + + FTN F + ++VG ++ + SD
Sbjct: 24 MYIPALLSVLVFMIYPFVKGTLITFTN--WNGF----SQVYQWVGFAQYERLFSDPDTWH 77
Query: 76 AFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSITVWKFM 135
K T + S + +VG+ +LL N ++ K + R ++ +P + L +W F
Sbjct: 78 ILKNTLHYGLGSTFFQNVVGLLYALLLNQS-IKTKAVTRTIVYLPVMISPLIMGYIWYFF 136
Query: 136 FDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDT 195
F G +N LL GIS P N + P + +I + M V A LQS+P
Sbjct: 137 FSYDGGALNDLLGVFGIS-PINALASPSLNPWIIVMINTYQYVGIAMVVYLAGLQSIPKD 195
Query: 196 LIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYFMVPYLYNAG 247
EAA +DGA Q+F + LP + I ++ + F V AG
Sbjct: 196 YYEAAQMDGAKQGQQFFTITLPLLMPSITINIVINIIGGLKLFDVIIALTAG 247
>emb|CAB88162.1| (AL352956) possible binding-protein-dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 318
Score = 72.2 bits (174), Expect = 7e-12
Identities = 72/280 (25%), Positives = 118/280 (41%), Gaps = 19/280 (6%)
Query: 21 ITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFKWT 80
+ A LFF L+ I+ I +A L + + +FVG +N+ + D + T
Sbjct: 39 VPAALFFALFAIVPLIMVAV----LSFMSWDGISSPEFVGTDNWSRLADDPVMLKSIWLT 94
Query: 81 WIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT----VWKFMF 136
+ V L+ + I L + + G RA+L + + +PLL S T +W+ +
Sbjct: 95 LLLTVLGVVLQTPLSILLGV-----WAAGHQRNRAVLSVIYFIPLLLSATAVSVLWRALL 149
Query: 137 DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTL 196
DP FG + G N + A L + W PF + A ++VP L
Sbjct: 150 DPNFGIPAEATWLFGDGN---LFGEQTTAIGVLAFVSTWQFTPFHTLIYQGAARAVPQVL 206
Query: 197 IEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYF-MVPYLYNAGLFEDKFI- 254
+AA IDGA +++F H+ LP + + + IL F V L G D I
Sbjct: 207 YQAAEIDGAGRYRQFFHITLPQLRTSMITSMILMIVGGLTTFETVLILTQGGPGTDTTIS 266
Query: 255 LLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT 294
Y + KAF + YG +A+ + + I I V+++
Sbjct: 267 AYYMYDKAFKSF-DYGIGSAIALALVVAATIISLIVVRVS 305
>pir||A72451 probable lactose transport system permease protein APE2253 -
Aeropyrum pernix (strain K1) >gi|5105954|dbj|BAA81265.1|
(AP000064) 276aa long hypothetical lactose transport
system permease protein [Aeropyrum pernix]
Length = 276
Score = 71.8 bits (173), Expect = 1e-11
Identities = 65/253 (25%), Positives = 114/253 (44%), Gaps = 14/253 (5%)
Query: 59 VGLENFKWILS----DEKFRSAFKWTWIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYR 114
VGL N+K ++ D FR+A T +FVA ++ + VL G+ L++L R + YR
Sbjct: 14 VGLYNYKVLVHFAKYDPMFRNALITTVVFVAVTLVVNVLGGLTLAILTFFLEERISIHYR 73
Query: 115 ALLIIPWALPLLFSITVWKFMF-DPVFGPINQLLKSIG-ISNPPNWIND--PFWAFLALN 170
L ++P P+ +W + F G +N++L G I P NW + P + L
Sbjct: 74 LLWLLPRMTPVAVYSLLWYYFFHSDAIGTLNRILLLAGVIDKPINWGSYMLPLGTWWILI 133
Query: 171 IIEVWLAYPFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILT 230
+ + F M V +A++S+P I AA +DGA+ R +I+P + + F T+
Sbjct: 134 FVNGLVGVSFGMIVFYSAIRSIPWEYIAAARVDGASNLVIIRRIIVPMIRWHLLFVTVWQ 193
Query: 231 SAASF-QYFMVPYLYNAGLFEDKF-----ILLYGFRKAFGATPHYGRATAVMVIATMVLA 284
+ Y + LY G+ + + +L++ G A A + ++ A
Sbjct: 194 MLSLLTTYTHIFLLYEWGVVDRTWGQTWSLLVFNLAFLPVGELRQGLAAAAATVLVVIGA 253
Query: 285 IYMYINVKITRLQ 297
I + ++I Q
Sbjct: 254 ILGLVTLRILGFQ 266
>gb|AAC99626.1| (AF043654) BxlF [Streptomyces lividans]
Length = 317
Score = 69.5 bits (167), Expect = 5e-11
Identities = 74/290 (25%), Positives = 119/290 (40%), Gaps = 24/290 (8%)
Query: 21 ITAFLFFNLWPIIYSIYLAFTNAQLGNFPVEKAGTLKFVGLENFKWILSDEKFRSAFKWT 80
+ A LFF L+ I+ I +A L + + +FVG +N+ + D + T
Sbjct: 39 VPAALFFALFAIVPLIMVAV----LSFMSWDGISSPEFVGTDNWSRLADDPVMLKSIWLT 94
Query: 81 WIFVATSVTLKVLVGIGLSLLYNSKYVRGKMIYRALLIIPWALPLLFSIT----VWKFMF 136
+ V L+ + I L + + G R +L + + +PLL S T +W+ +
Sbjct: 95 LLLTVLGVVLQTPLSILLGV-----WAAGHQRTRPVLSVIYFIPLLLSATAVSVLWRALL 149
Query: 137 DPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAYPFMMTVITAALQSVPDTL 196
DP FG + G N + A L + W PF + A VP L
Sbjct: 150 DPNFGIPAEATWLFGDGN---LFGEQTTAIGVLAFVSTWQFTPFHTLIYQGAAAPVPQVL 206
Query: 197 IEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSAASFQYF-MVPYLYNAGLFEDKFI- 254
+AA IDGA +++F H+ LP + + + IL F V L G D I
Sbjct: 207 YQAAEIDGAGRYRQFFHITLPQLRTSMITSMILMIVGGLTTFETVLILTQGGPGTDTTIS 266
Query: 255 LLYGFRKAFGATPHYGRATAVMVIATMVLAIYMYINVKIT-----RLQEG 299
Y + KAF + YG +A+ + + I I V+++ R+ EG
Sbjct: 267 AYYMYDKAFKSF-DYGIGSAIALALVVAATIISLIVVRVSGYDKMRIMEG 315
>gb|AAC98126.1| (AF098273) integral membrane protein [Bacillus stearothermophilus]
Length = 360
Score = 68.7 bits (165), Expect = 8e-11
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 21/246 (8%)
Query: 64 FKWILSDEKFRSAFKWTWIFVATSVTLKVLVGIGL----SLLYNSKYV-RGKMIYRALLI 118
FK + E R W + ++T LK++ +G+ +LL N YV + K + ++
Sbjct: 119 FKTMFEYEDARQVI-WNTLVIST---LKIIFNLGVPLAFALLLNEVYVMKFKRTVQTIVY 174
Query: 119 IPWALPLLFSITVWKFMFDPVFGPINQLLKSIGISNPPNWINDPFWAFLALNIIEVWLAY 178
+P L + + M P G +N+ L G+ P ++ D W + + +VW
Sbjct: 175 LPHFLSWVILGGILIDMLSPEGGIVNRFLSIFGVK-PIFFLGDNDWFRTVVVVTDVWKEC 233
Query: 179 PFMMTVITAALQSVPDTLIEAAIIDGANYWQRFRHVILPTVSKPIAFATILTSA----AS 234
F V AAL S+ +L EAAI+DGAN WQ+ ++ LP++ I L+ A
Sbjct: 234 GFNTIVFLAALTSIKGSLYEAAIVDGANRWQQTIYISLPSMLPIIIVVGTLSLGNILNAG 293
Query: 235 FQYFM---VPYLYNAGLFEDKFI----LLYGFRKAFGATPHYGRATAVMVIATMVLAIYM 287
F + P +Y G D ++ LL G A + + +++ T Y
Sbjct: 294 FDQILNLYNPLVYKTGDIIDTYVYRVGLLNGDFSYATAVGLFKSVISFILVVTGYRLAYK 353
Query: 288 YINVKI 293
Y N KI
Sbjct: 354 YANYKI 359
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.329 0.142 0.447
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108764041
Number of Sequences: 2977
Number of extensions: 4403382
Number of successful extensions: 12623
Number of sequences better than 1.0e-10: 133
Number of HSP's better than 0.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 12322
Number of HSP's gapped (non-prelim): 146
length of query: 302
length of database: 189,106,746
effective HSP length: 50
effective length of query: 252
effective length of database: 159,182,396
effective search space: 40113963792
effective search space used: 40113963792
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.8 bits)
S2: 165 (68.7 bits)