BLASTP 2.0.10 [Aug-26-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PAB0121 (malG) DE:MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN
MALG
(412 letters)
Database: ./suso.pep; /banques/blast2/nr.pep
598,487 sequences; 189,106,746 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H75206 maltose transport system permease protein malg PAB01... 809 0.0
pir||T08161 MalG homolog - Pyrococcus furiosus (fragment) >gi|24... 439 e-122
pir||A75504 maltose ABC transporter, permease protein - Deinococ... 143 4e-33
dbj|BAB05740.1| (AP001514) maltose/maltodextrin transport system... 143 4e-33
pir||E70038 maltodextrin transport system permease homolog yvfM ... 138 2e-31
pir||S63616 malG protein homolog cymG - Klebsiella oxytoca >gi|8... 137 2e-31
emb|CAB65653.1| (AJ252161) putative maltose transport membrane p... 131 1e-29
gb|AAD51829.1|AF175299_4 (AF175299) ThuG [Sinorhizobium meliloti] 129 5e-29
pir||F82397 maltose ABC transporter, permease protein VCA0943 [i... 128 1e-28
emb|CAA08866.1| (AJ009832) putative transmembrane sugar transpor... 128 1e-28
pir||H72205 maltose ABC transporter, permease protein - Thermoto... 127 2e-28
dbj|BAB06643.1| (AP001517) maltose/maltodextrin transport system... 127 2e-28
pir||A70034 maltodextrin transport system permease homolog yvdI ... 127 2e-28
emb|CAB59590.1| (AL132662) putative sugar transporter inner memb... 127 2e-28
gb|AAF70305.1|AF259975_1 (AF259975) MalG [Vibrio cholerae] 127 2e-28
sp|P77716|YCJP_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 126 5e-28
pir||T35791 probable transmembrane sugar transport protein - Str... 126 5e-28
sp|Q04699|MALD_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROT... 125 7e-28
pir||T46752 inner membrane protein malG [validated] - Thermococc... 124 2e-27
sp|P18814|MALG_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 123 3e-27
sp|P07622|MALG_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 122 1e-26
sp|P26468|MALG_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN M... 121 1e-26
pir||F75395 ABC transporter, permease protein, MalFG family - De... 119 5e-26
sp|O32154|YURM_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 115 1e-24
pir||C71369 probable sugar ABC transporter, permease protein (y4... 114 2e-24
emb|CAB90877.1| (AL355752) putative maltose permease [Streptomyc... 114 2e-24
pir||H72282 maltose ABC transporter, permease protein - Thermoto... 114 2e-24
emb|CAB94619.1| (AL359214) putative sugar transporter integral m... 113 4e-24
dbj|BAB04965.1| (AP001511) unknown conserved protein [Bacillus h... 113 5e-24
emb|CAC11275.1| (AL445063) inner membrane protein of trehalose/m... 113 5e-24
emb|CAB95277.1| (AL359779) putative sugar transport integral mem... 112 7e-24
pir||E72395 sugar ABC transporter, permease protein - Thermotoga... 111 2e-23
gb|AAC44395.1| (U43526) ORF-4 [Streptococcus pneumoniae] 108 1e-22
sp|Q53683|YOE1_STRAT HYPOTHETICAL PROTEIN IN OLED 5'REGION (ORF1... 107 3e-22
pir||S75051 lactose transport system permease protein lacG - Syn... 107 3e-22
emb|CAB72404.1| (AL138978) putative integral membrane transport ... 106 4e-22
dbj|BAA02472.1| (D13178) TVG [Thermoactinomyces vulgaris] >gi|87... 106 5e-22
gb|AAG09708.1|AF218837_3 (AF218837) unknown [Pasteurella multocida] 106 5e-22
emb|CAA68974.1| (Y07706) putative maltose permease [Streptomyces... 106 7e-22
pir||T47063 hypothetical protein [imported] - Yersinia pestis >g... 106 7e-22
sp|P55603|Y4OR_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 104 1e-21
sp|O58760|YJ16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTE... 104 1e-21
pir||D70952 probable sugar - Mycobacterium tuberculosis (strain ... 104 2e-21
emb|CAB72190.1| (AL138851) putative sugar transporter inner memb... 103 3e-21
dbj|BAB03316.1| (AB011415) AlgM2 [Sphingomonas sp.] 103 3e-21
dbj|BAB07566.1| (AP001520) ABC transporter (permease) [Bacillus ... 103 4e-21
pir||B75208 transmembrane sugar transport protein PAB2231 - Pyro... 102 7e-21
pir||D72378 sugar ABC transporter, permease protein - Thermotoga... 102 1e-20
pir||E75187 sugar abc transporter, permease protein PAB2335 - Py... 101 1e-20
pir||T35672 probable transmembrane transport protein - Streptomy... 101 2e-20
pir||D71220 probable sugar transport membrane protein - Pyrococc... 101 2e-20
pir||T45203 probable transport protein malg [imported] - Mycobac... 100 3e-20
emb|CAB59597.1| (AL132662) probable sugar transport inner membra... 99 6e-20
pir||C82557 ABC transporter sugar permease XF2446 [imported] - X... 99 8e-20
sp|P40980|YOR2_CALSR HYPOTHETICAL 30.9 KD PROTEIN IN XYLR 5'REGI... 97 3e-19
pir||B71243 probable maltose transport system permease protein -... 97 4e-19
emb|CAB56685.1| (AL121596) putative binding-protein dependent tr... 97 4e-19
pir||S75972 hypothetical protein - Synechocystis sp. (strain PCC... 96 6e-19
emb|CAB42552.1| (Y16753) sugar permease [Thermus thermophilus] 96 6e-19
pir||T03551 transmembrane maltose transport protein - Rhodobacte... 96 1e-18
pir||F70703 probable uspE protein - Mycobacterium tuberculosis (... 95 1e-18
pir||F72379 sugar ABC transporter, permease protein - Thermotoga... 95 1e-18
pir||B83353 probable binding-protein-dependent maltose/mannitol ... 95 2e-18
gb|AAC45768.1| (AF018073) sorbitol/mannitol transport inner memb... 95 2e-18
pir||T30267 suger transport protein - Streptomyces lividans >gi|... 94 2e-18
emb|CAB07809.1| (Z93773) permease [Thermus sp. T2] 94 3e-18
pir||T36900 probable integral membrane transport protein - Strep... 94 3e-18
pir||T36914 probable integral membrane sugar transport protein -... 94 3e-18
emb|CAC16437.1| (AL450165) putative sugar transport integral mem... 94 3e-18
gb|AAK41272.1| Sugar ABC transporter [Sulfolobus solfataricus] 93 5e-18
emb|CAB71198.1| (AL138538) putative sugar transport inner membra... 93 6e-18
dbj|BAB07407.1| (AP001519) sugar transport system (permease) [Ba... 93 6e-18
gb|AAC04470.1| (AF007800) MtlG [Pseudomonas fluorescens] 92 8e-18
pir||C72756 probable multiple sugar-binding transport system per... 92 1e-17
emb|CAB61806.1| (AL133236) putative sugar-permease [Streptomyces... 92 1e-17
dbj|BAB04838.1| (AP001511) lactose transport system (permease) [... 92 1e-17
emb|CAB87330.1| (AL163672) putative integral membrane transport ... 91 2e-17
pir||E72331 hypothetical protein TM0812 - Thermotoga maritima (s... 90 6e-17
gb|AAK41417.1| Sugar ABC transporter [Sulfolobus solfataricus] 89 7e-17
pir||E70693 probable ugpE protein - Mycobacterium tuberculosis (... 89 9e-17
emb|CAC11827.1| (AL445065) probable sugar ABC transporter, perme... 89 9e-17
emb|CAB55716.1| (AL117387) putative binding-protein-dependent tr... 88 2e-16
dbj|BAB07401.1| (AP001519) sugar ABC transporter (permease) [Bac... 87 3e-16
pir||H72450 probable maltose transport system permease protein A... 87 5e-16
emb|CAC10106.1| (AL442165) putative cellobiose transport permeas... 86 8e-16
pir||D71123 probable sugar transport system permease protein - P... 85 1e-15
emb|CAB70939.1| (AL137778) putative transport system inner membr... 85 1e-15
pir||B72279 hypothetical protein TM1233 - Thermotoga maritima (s... 85 2e-15
emb|CAA91218.1| (Z56279) integral membrane protein [Thermoanaero... 84 2e-15
gb|AAF43782.1|AF135015_1 (AF135015) putative integral membrane p... 84 2e-15
dbj|BAB04622.1| (AP001510) L-arabinose transport system (permeas... 84 3e-15
emb|CAC11293.1| (AL445063) trehalose/maltose transporter, inner ... 83 4e-15
emb|CAB11327.1| (Z98604) possible transport protein [Mycobacteri... 83 7e-15
dbj|BAB04785.1| (AP001510) unknown conserved protein [Bacillus h... 82 9e-15
pir||T37227 probable sugar transport system permease protein - S... 82 1e-14
pir||F83248 probable permease of ABC sugar transporter PA3188 [i... 82 1e-14
sp|Q9Z3R7|AGLG_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE ... 82 2e-14
pir||G72357 sugar ABC transporter, permease protein - Thermotoga... 82 2e-14
pir||C69588 L-arabinose transport (integral membrane protein) ar... 81 2e-14
emb|CAA61936.1| (X89810) putative integral protein [Bacillus sub... 81 2e-14
dbj|BAB05585.1| (AP001513) sugar transport system (permease) (bi... 81 3e-14
dbj|BAB05645.1| (AP001513) sugar transport system (permease) [Ba... 81 3e-14
sp|Q00751|MSMG_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PER... 80 4e-14
sp|P37729|AMYC_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANS... 80 5e-14
sp|P53561|YTCP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN I... 80 5e-14
pir||T30595 sugar transport homolog - Amycolatopsis orientalis >... 80 5e-14
pir||F70943 hypothetical protein Rv2039c - Mycobacterium tubercu... 80 5e-14
dbj|BAA28361.1| (D85027) integral membrane protein [Thermus sp. A4] 80 5e-14
sp|O31520|YESQ_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y... 80 6e-14
pir||B27626 hypothetical protein 1 - Streptococcus mutans (fragm... 79 8e-14
emb|CAB76328.1| (AL158061) putative binding-protein dependent tr... 79 1e-13
dbj|BAB05943.1| (AP001514) maltose transport system (permease) [... 79 1e-13
emb|CAC01654.1| (AL391072) putative sugar-binding integral membr... 78 1e-13
emb|CAB88163.1| (AL352956) putative binding-protein-dependent tr... 78 2e-13
gb|AAC99627.1| (AF043654) BxlG [Streptomyces lividans] 78 2e-13
pir||F72203 sugar ABC transporter, permease protein - Thermotoga... 78 2e-13
pir||T46604 ABC-type transport system permease protein cebG [val... 78 2e-13
dbj|BAB04797.1| (AP001510) glycerol-3-phosphate ABC transporter ... 77 4e-13
dbj|BAB04200.1| (AP001508) ABC transporter (permiase) [Bacillus ... 76 5e-13
dbj|BAB04514.1| (AP001509) sugar transport system (permease) (bi... 76 5e-13
sp|P39129|LPLC_BACSU LPLC PROTEIN >gi|7442828|pir||B69653 transm... 72 1e-11
pir||T36086 probable binding protein dependent transport protein... 72 1e-11
pir||A56641 probable membrane transport protein - Clostridium pe... 72 1e-11
gb|AAB17464.1| (U51868) unknown [Bacillus subtilis] 72 1e-11
gb|AAC98127.1| (AF098273) integral membrane protein [Bacillus st... 70 5e-11
dbj|BAB05832.1| (AP001514) ABC transporter (permease) [Bacillus ... 69 7e-11
>pir||H75206 maltose transport system permease protein malg PAB0121 - Pyrococcus
abyssi (strain Orsay) >gi|5457612|emb|CAB49103.1|
(AJ248283) MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN
MALG [Pyrococcus abyssi]
Length = 412
Score = 809 bits (2066), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 1 MIKRRDFLRTILMTGLALFVMFIILFPVYYIFTVSIKPVSTLATTEIELIPKNVTLDAYK 60
MIKRRDFLRTILMTGLALFVMFIILFPVYYIFTVSIKPVSTLATTEIELIPKNVTLDAYK
Sbjct: 1 MIKRRDFLRTILMTGLALFVMFIILFPVYYIFTVSIKPVSTLATTEIELIPKNVTLDAYK 60
Query: 61 DVLFGFQGSKLVGNFSGTISGLGEVKNGRLIIRNAEIEGVIKKGPFTILKFRIPVPIVSG 120
DVLFGFQGSKLVGNFSGTISGLGEVKNGRLIIRNAEIEGVIKKGPFTILKFRIPVPIVSG
Sbjct: 61 DVLFGFQGSKLVGNFSGTISGLGEVKNGRLIIRNAEIEGVIKKGPFTILKFRIPVPIVSG 120
Query: 121 STQSNENLKGEFRGRIEGVLTITKINRDSSIGFGIIKDAKVSGSINGNEISGVLRPIIVR 180
STQSNENLKGEFRGRIEGVLTITKINRDSSIGFGIIKDAKVSGSINGNEISGVLRPIIVR
Sbjct: 121 STQSNENLKGEFRGRIEGVLTITKINRDSSIGFGIIKDAKVSGSINGNEISGVLRPIIVR 180
Query: 181 NKGEAKLTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLY 240
NKGEAKLTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLY
Sbjct: 181 NKGEAKLTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLY 240
Query: 241 FYLMFTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSIN 300
FYLMFTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSIN
Sbjct: 241 FYLMFTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSIN 300
Query: 301 PDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLS 360
PDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLS
Sbjct: 301 PDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLS 360
Query: 361 VWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
VWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLKE
Sbjct: 361 VWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
>pir||T08161 MalG homolog - Pyrococcus furiosus (fragment)
>gi|2435437|gb|AAB71228.1| (AF016588) putative integral
membrane component of starch degradation products
transport [Pyrococcus furiosus]
Length = 265
Score = 439 bits (1117), Expect = e-122
Identities = 221/265 (83%), Positives = 244/265 (91%), Gaps = 3/265 (1%)
Query: 151 IGFGIIKDAKV-SGSINGNEIS-GVLRPII-VRNKGEAKLTNLGKFVNSVFFHHLKNSLI 207
IG G+IK+ + SG +NG +IS G L I +R+ G+A+LT +GKFVNS FFHHL+NSLI
Sbjct: 1 IGLGVIKNVTLKSGEVNGLKISEGKLAGFIRIRDSGKAELTAIGKFVNSKFFHHLRNSLI 60
Query: 208 LALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGIMVKL 267
LA LTV LTLLFVVPAAYAFSRLKFFGREH+LYFYLMFTQVAGGLGIAGLIALYG++VKL
Sbjct: 61 LATLTVFLTLLFVVPAAYAFSRLKFFGREHILYFYLMFTQVAGGLGIAGLIALYGMLVKL 120
Query: 268 GLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLLPMAL 327
GL+NKLPALA++YAAGSVPFNTWLLKSYIDSI+PDFDEAAL+DGA+YLQIIRYVLLPMAL
Sbjct: 121 GLYNKLPALAIIYAAGSVPFNTWLLKSYIDSISPDFDEAALVDGASYLQIIRYVLLPMAL 180
Query: 328 PGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAATLLFA 387
PGIATVAVMSFIGGWTEFILASLLL + NQPLSVWIYTLMGGIGRGIDWNYFAAA LLFA
Sbjct: 181 PGIATVAVMSFIGGWTEFILASLLLTEENQPLSVWIYTLMGGIGRGIDWNYFAAAALLFA 240
Query: 388 LPVFVMFMLAQKYIRSGLTLGGLKE 412
LPVF+MFMLAQ YIRSGLT+GGLKE
Sbjct: 241 LPVFIMFMLAQNYIRSGLTVGGLKE 265
>pir||A75504 maltose ABC transporter, permease protein - Deinococcus radiodurans
(strain R1) >gi|6458258|gb|AAF10143.1|AE001914_5
(AE001914) maltose ABC transporter, permease protein
[Deinococcus radiodurans]
Length = 458
Score = 143 bits (357), Expect = 4e-33
Identities = 89/243 (36%), Positives = 131/243 (53%), Gaps = 10/243 (4%)
Query: 171 SGVLRPIIVRNKGEAKLTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRL 230
+GVL I+V TN KF+ SV +N+L ++ +T L +L A YA +RL
Sbjct: 225 AGVLLLILVTPAQFQGATNESKFLLSV-----RNTLFVSTVTGLLAILLSTTAGYAMARL 279
Query: 231 KFFGREHVLYFYLMFTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTW 290
+F GR +L F++ L L+A+Y ++ LGL N L L Y+ G++ FNTW
Sbjct: 280 RFPGRFQMLLFFIFIQMFPVFLA---LVAIYTLLSALGLVNTFTGLILAYSGGAIAFNTW 336
Query: 291 LLKSYIDSINPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASL 350
+ K Y++S+ +EAA++DGAT Q R V+LP++ + + + FIG + EFILAS+
Sbjct: 337 IYKGYVESLPESLEEAAMVDGATRWQTFRRVVLPLSGSMLVFIFLNQFIGTYAEFILASV 396
Query: 351 LLEQANQ-PLSVWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGG 409
LL Q + V + + G W FAAA L ALP+ +F Q Y G T GG
Sbjct: 397 LLTGVEQWTVGVMLRSFTSG-QFSTKWGVFAAAATLGALPIVALFYSFQNYFVGGATAGG 455
Query: 410 LKE 412
+KE
Sbjct: 456 VKE 458
>dbj|BAB05740.1| (AP001514) maltose/maltodextrin transport system (permease)
[Bacillus halodurans]
Length = 283
Score = 143 bits (357), Expect = 4e-33
Identities = 81/210 (38%), Positives = 127/210 (59%), Gaps = 5/210 (2%)
Query: 203 KNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYG 262
KNSL ++L T+ T++ V AYAFSR +F GR+H L +L+ + + LIAL+
Sbjct: 77 KNSLKISLFTMVGTMISVSFTAYAFSRFRFKGRKHGLTLFLLLQMIPQ---FSALIALFV 133
Query: 263 IMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVL 322
+ LGL N L ++Y G +P NT+L+K Y+DSI D DE+A IDGA++ +I ++
Sbjct: 134 LAQMLGLMNSHWLLIMLYIGGLIPMNTYLMKGYMDSIPIDLDESARIDGASHTRIFLQII 193
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDWNYFAA 381
+P++ P +A VA+ F G +FILAS +L + L + ++ L+ + G + FAA
Sbjct: 194 MPLSKPMLAVVAMNGFTGPLGDFILASTILRTPDAYTLPIGLFNLVNDV-MGASYTKFAA 252
Query: 382 ATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+L ++PV +F+L Q++ SGLT GG K
Sbjct: 253 GAILISIPVAFIFVLLQRHFVSGLTAGGTK 282
>pir||E70038 maltodextrin transport system permease homolog yvfM - Bacillus
subtilis >gi|1945713|emb|CAB08007.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635927|emb|CAB15419.1| (Z99121) similar to
maltodextrin transport system permease [Bacillus
subtilis]
Length = 283
Score = 138 bits (343), Expect = 2e-31
Identities = 81/209 (38%), Positives = 124/209 (58%), Gaps = 5/209 (2%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NS+ ++L T+ +LL V AYAFSR +F GR++ L +L+ + + LIAL+ +
Sbjct: 78 NSMKISLFTMAGSLLCVTFTAYAFSRFRFKGRKYALTLFLLLQMIPQ---FSALIALFVL 134
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
LG+ N L L+Y G +P NT+L+K Y+DSI D DE+A IDGA+ +I ++L
Sbjct: 135 AQILGMINSHWLLILLYIGGLIPMNTYLMKGYMDSIPMDLDESAKIDGASSTRIFFQIIL 194
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLLE-QANQPLSVWIYTLMGGIGRGIDWNYFAAA 382
P++ P A VA+ F G +F+L+S +L + L V ++ L+ + G + FAA
Sbjct: 195 PLSKPMAAVVAMNGFTGPLGDFVLSSTILRTPESYTLPVGLFNLVNDV-MGASYTTFAAG 253
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
LL ++PV V+F++ QK SGLT GG K
Sbjct: 254 ALLISIPVAVIFIMLQKNFVSGLTAGGTK 282
>pir||S63616 malG protein homolog cymG - Klebsiella oxytoca
>gi|854234|emb|CAA60006.1| (X86014) cymG [Klebsiella
oxytoca]
Length = 277
Score = 137 bits (342), Expect = 2e-31
Identities = 77/211 (36%), Positives = 125/211 (58%), Gaps = 5/211 (2%)
Query: 203 KNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYG 262
KN+ ILA + ++L+ V A+ FSR +F ++ +L L+ L + A+Y
Sbjct: 71 KNTFILATCNMLISLVVVTITAFIFSRYRFKAKKKILMSILVLQMFPAFLSMT---AIYI 127
Query: 263 IMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVL 322
++ K+ L + L LVY GS+PF TWL+K Y D+I DEAA IDGA +L I ++
Sbjct: 128 LLSKMNLIDTYIGLLLVYVTGSLPFMTWLVKGYFDAIPTSLDEAAKIDGAGHLTIFFEII 187
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGIDWNYFAA 381
LP+A P + VA++SF G W +FIL +L+L ++ L++ I++ + ++ FAA
Sbjct: 188 LPLAKPILVFVALVSFTGPWMDFILPTLILRSEDKMTLAIGIFSWISS-NSAENFTLFAA 246
Query: 382 ATLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
LL A+P+ ++F++ QK+I +GL G +KE
Sbjct: 247 GALLVAVPITLLFIVTQKHITTGLVSGAVKE 277
>emb|CAB65653.1| (AJ252161) putative maltose transport membrane protein
[Alicyclobacillus acidocaldarius]
Length = 301
Score = 131 bits (327), Expect = 1e-29
Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 6/220 (2%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F F+ ++NSL++ ++ +A+AFS+L+F+GR++ L L+ L
Sbjct: 86 FQGGQFWTWVRNSLVVGVVVAMAQSFITAMSAFAFSKLRFYGRKYGLMTLLLLQMFPNIL 145
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
IA A Y + KL + + L + LV G+ FN WLLK Y+DS+ + DEAA+IDGA
Sbjct: 146 AIA---AFYTALAKLNMIDMLGSYILVML-GTSAFNIWLLKGYMDSVPKELDEAAVIDGA 201
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQA-NQPLSVWIYTLMGGIG 371
T Q +V LP++ P + + ++ +G ++E++ A +L+ N L V +Y L+ G
Sbjct: 202 TTWQRFIHVTLPLSTPMMVVIFFLTLVGIFSEYMFAGTILQSPWNYTLGVGMYNLISG-Q 260
Query: 372 RGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+W FAAA LL A+P+ ++F +AQ+Y+ GL G +K
Sbjct: 261 FAKNWGEFAAAALLSAVPLAIVFAVAQRYLTKGLVAGSVK 300
>gb|AAD51829.1|AF175299_4 (AF175299) ThuG [Sinorhizobium meliloti]
Length = 276
Score = 129 bits (322), Expect = 5e-29
Identities = 78/225 (34%), Positives = 123/225 (54%), Gaps = 10/225 (4%)
Query: 191 GKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYL---MFTQ 247
G F + F +L NSL++A L V ++LL V AAYA +R++F GR +L L MF Q
Sbjct: 57 GIFSHGTFVRNLGNSLLVATLVVAISLLLAVTAAYALARVRFRGRGLLLLTILSVSMFPQ 116
Query: 248 VAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAA 307
+A G+ LI GI FN AL Y ++PF W+L +++ + + +EAA
Sbjct: 117 IAVLAGLFELIRFVGI------FNTPLALIFSYMIFTLPFTVWVLTTFMRDLPIEIEEAA 170
Query: 308 LIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILA-SLLLEQANQPLSVWIYTL 366
++DGA+ +I V +P+ P + T +++FI W EF+ A + + + V I L
Sbjct: 171 IVDGASPWVVITRVFMPLMWPALVTTGLLAFIAAWNEFLFALTFTSSNTQRTVPVAIALL 230
Query: 367 MGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
GG I W AA+++ +P+ V+ ++ Q+ I SGLT GG+K
Sbjct: 231 SGGSQFEIPWGNIMAASVIVTVPLVVLVLIFQRRIISGLTAGGVK 275
>pir||F82397 maltose ABC transporter, permease protein VCA0943 [imported] -
Vibrio cholerae (group O1 strain N16961)
>gi|9658380|gb|AAF96839.1| (AE004421) maltose ABC
transporter, permease protein [Vibrio cholerae]
Length = 296
Score = 128 bits (318), Expect = 1e-28
Identities = 80/220 (36%), Positives = 126/220 (56%), Gaps = 19/220 (8%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
L NS+ +A +T L + +AYAF+R++F G+E +L ++F + L+ALY
Sbjct: 85 LWNSVKVAGITSVLIVALSTTSAYAFARMRFKGKETILKAMMIFQMFPA---VLALVALY 141
Query: 262 GIMVKLGLFNKLPAL----ALVYA-AGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
+ KLG + L L+++ G + + W +K Y ++I+ +EAA +DGAT Q
Sbjct: 142 ALFDKLGQYIPFLGLNTHGGLIFSYLGGIALHVWTIKGYFETIDRSLEEAAALDGATPWQ 201
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID- 375
R VLLP+++P +A V ++SFIG E +ASLLL N YTL G+ + +
Sbjct: 202 AFRLVLLPLSVPILAVVFILSFIGVVGEVPVASLLLSDVNS------YTLAVGMQQYLYP 255
Query: 376 ----WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W FAAA +L ALP+ ++F+LAQ+++ GLT GG+K
Sbjct: 256 QNYLWGDFAAAAVLSALPITIVFLLAQRWLVGGLTAGGVK 295
>emb|CAA08866.1| (AJ009832) putative transmembrane sugar transport protein
[Thermotoga neapolitana]
Length = 498
Score = 128 bits (318), Expect = 1e-28
Identities = 75/222 (33%), Positives = 128/222 (56%), Gaps = 14/222 (6%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F + NS+I+A L +T AAY FSR++F+GR++ + L+ I +
Sbjct: 282 FLRWVANSVIVAGLVSIITTAVCALAAYPFSRMRFWGRQYGIMALLLIQMFPA---IMYM 338
Query: 258 IALYGIMVKLGLFNKLPALAL------VYA-AGSVPFNTWLLKSYIDSINPDFDEAALID 310
+A+YG++ +G F LP L L ++A G++ +N +L+K + D+I +EAA+ID
Sbjct: 339 VAIYGLLKLIGQF--LPFLGLDSLGGLIFAYLGNIAYNMYLIKGFYDTIPSSLEEAAMID 396
Query: 311 GATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQA-NQPLSVWIYTLMGG 369
GAT Q +++P+ALP ++ + +++FIG + EF+LA ++L+ N ++ ++T G
Sbjct: 397 GATRFQTFYKIVVPLALPILSVIVILTFIGTFNEFVLARIILQDVKNYTYALGLWTFSTG 456
Query: 370 IGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+W F AA LL P+ ++F+ QKYI GLT G +K
Sbjct: 457 -AYETEWGLFTAAALLGMTPMVILFLSLQKYIVGGLTKGSVK 497
>pir||H72205 maltose ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4982419|gb|AAD36899.1|AE001820_8
(AE001820) maltose ABC transporter, permease protein
[Thermotoga maritima]
Length = 833
Score = 127 bits (317), Expect = 2e-28
Identities = 75/222 (33%), Positives = 127/222 (56%), Gaps = 14/222 (6%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F + NS+I+A L +T AAY FSR++F+GR++ + L+ I +
Sbjct: 617 FLRWVMNSVIVAGLVSLITTAVCALAAYPFSRMRFWGRQYGIMALLLIQMFPA---IMYM 673
Query: 258 IALYGIMVKLGLFNKLPALAL------VYA-AGSVPFNTWLLKSYIDSINPDFDEAALID 310
+A+YG++ +G F LP L L ++A G++ +N +L+K + D+I +EAA+ID
Sbjct: 674 VAIYGLLKLIGQF--LPFLGLDSLGGLIFAYLGNIAYNMYLIKGFYDTIPSSLEEAAMID 731
Query: 311 GATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQA-NQPLSVWIYTLMGG 369
GAT Q +++P+ALP + + +++FIG + EF+LA ++L+ N ++ ++T G
Sbjct: 732 GATRFQTFYKIVVPLALPILTVIVILTFIGTFNEFVLARIILQDVKNYTYALGLWTFSTG 791
Query: 370 IGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+W F AA LL P+ ++F+ QKYI GLT G +K
Sbjct: 792 -AYETEWGLFTAAALLGMTPMVILFLSLQKYIVGGLTKGSVK 832
>dbj|BAB06643.1| (AP001517) maltose/maltodextrin transport system (permease)
[Bacillus halodurans]
Length = 280
Score = 127 bits (317), Expect = 2e-28
Identities = 72/217 (33%), Positives = 123/217 (56%), Gaps = 5/217 (2%)
Query: 196 SVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIA 255
S + KN+LI+A +T + V AYAFSR +F GR + LY +L+ +
Sbjct: 67 SNYLQWYKNTLIVASVTSVCSTFLVALTAYAFSRYRFVGRTYGLYGFLLLQMFPV---LM 123
Query: 256 GLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
++ALY ++ + L + L L L+Y S+P N +L+K Y D+I + DE+A +DGA +
Sbjct: 124 AMVALYILLNTVNLLDTLLGLILIYVGTSIPMNAFLVKGYFDTIPRELDESAKLDGAGHF 183
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQ-ANQPLSVWIYTLMGGIGRGI 374
+I ++LP+A P +A VA+ +F+ + +FIL ++L N L++ ++ +
Sbjct: 184 RIFFTIMLPLAKPILAVVALFNFMSPFMDFILPRIILRSPENYTLALGLFNFVNDQFAN- 242
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
++ FAA +L A+P+ +F+ Q+Y+ SGLT G K
Sbjct: 243 NFTRFAAGAILIAIPIATVFLFLQRYLISGLTTGATK 279
>pir||A70034 maltodextrin transport system permease homolog yvdI - Bacillus
subtilis >gi|1945668|emb|CAB08038.1| (Z94043)
hypothetical protein [Bacillus subtilis]
>gi|2635972|emb|CAB15464.1| (Z99121) similar to
maltodextrin transport system permease [Bacillus
subtilis]
Length = 278
Score = 127 bits (316), Expect = 2e-28
Identities = 72/220 (32%), Positives = 122/220 (54%), Gaps = 5/220 (2%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F +++ + N+L++AL + L + V A Y++SR +F GR+ L F+L+ V
Sbjct: 62 FDETLYLNWYSNTLVIALSVMVLQVTIVTLAGYSYSRYRFAGRKKSLIFFLIIQMVPT-- 119
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
+A L A Y + + +G ++ L +Y G +P NTWL+K Y D++ + DEAA IDGA
Sbjct: 120 -MAALTAFYVLAMLIGALDQYWFLTAIYIGGGIPMNTWLMKGYFDTVPREIDEAARIDGA 178
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIG 371
+L+I ++LP+ P +A A+ +F+ + +++L LL + ++V + + +
Sbjct: 179 GHLRIFASIVLPLVKPMLAVQALWAFMAPFGDYLLTKFLLRSPERLTIAVGLQSFISN-P 237
Query: 372 RGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ FAA +L ALP+ V+F QK SGLT GG K
Sbjct: 238 QQQKVALFAAGAILAALPICVLFFFLQKNFVSGLTAGGTK 277
>emb|CAB59590.1| (AL132662) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 285
Score = 127 bits (316), Expect = 2e-28
Identities = 72/211 (34%), Positives = 116/211 (54%), Gaps = 7/211 (3%)
Query: 203 KNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYG 262
+NSL++ L V L LL + AAYA +R+++ GR + + Q+A + +I +Y
Sbjct: 79 RNSLLVTLSAVLLALLVALGAAYAVARMRWRGRRQFM-LAVFVAQMAPWESL--IIPIYI 135
Query: 263 IMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVL 322
I G+ ++LP L L+Y ++PF +L+ +I I P+ +EAA +DG T R V
Sbjct: 136 ISRDTGMLDRLPTLTLIYFMITLPFTVVVLRGFIAGIPPELEEAAQVDGCTRAGAFRRVA 195
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLL--EQANQPLSVWIYTLMGGIGRGIDWNYFA 380
P+ PG+ ++ FI W EF A+ L+ +Q ++ L VW+ + G DW
Sbjct: 196 FPLLAPGLMATSLFGFITAWNEFTYANFLIIKQQDSRTLPVWLSSFQSTF--GTDWGATM 253
Query: 381 AATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA LFALP V+F+ Q+++ +GL GG+K
Sbjct: 254 AAATLFALPALVIFLALQRHVTAGLASGGVK 284
>gb|AAF70305.1|AF259975_1 (AF259975) MalG [Vibrio cholerae]
Length = 296
Score = 127 bits (316), Expect = 2e-28
Identities = 80/220 (36%), Positives = 125/220 (56%), Gaps = 19/220 (8%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
L NS+ +A +T L + +AYAF+R++F G+E +L ++F + L+ALY
Sbjct: 85 LWNSVKVAGITSVLIVALSTTSAYAFARMRFKGKETILKAMMIFQMFPA---VLALVALY 141
Query: 262 GIMVKLGLFNKLPAL----ALVYA-AGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
+ KLG + L L++ G + + W +K Y ++I+ +EAA +DGAT Q
Sbjct: 142 ALFDKLGQYIPFLGLNTHGGLIFPYLGGIALHVWTIKGYFETIDRSLEEAAALDGATPWQ 201
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID- 375
R VLLP+++P +A V ++SFIG E +ASLLL N YTL G+ + +
Sbjct: 202 AFRLVLLPLSVPILAVVFILSFIGVVGEVPVASLLLSDVNS------YTLAVGMQQYLYP 255
Query: 376 ----WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W FAAA +L ALP+ ++F+LAQ+++ GLT GG+K
Sbjct: 256 QNYLWGDFAAAAVLSALPITIVFLLAQRWLVGGLTAGGVK 295
>sp|P77716|YCJP_ECOLI HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YCJP
>gi|7442792|pir||C64880 probable multiple sugar
transport protein b1312 precursor - Escherichia coli
>gi|1742150|dbj|BAA14888.1| (D90769) Maltose transport
system permease protein MalG. [Escherichia coli]
>gi|1742158|dbj|BAA14895.1| (D90770) Maltose transport
system permease protein MalG. [Escherichia coli]
>gi|1787571|gb|AAC74394.1| (AE000229) putative transport
system permease protein [Escherichia coli K12]
Length = 280
Score = 126 bits (313), Expect = 5e-28
Identities = 72/222 (32%), Positives = 127/222 (56%), Gaps = 20/222 (9%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHV---LYFYLMFTQVAGGLGI 254
F + +NSL++++++ + + + AYA SRL+F GR + Y MF+ GI
Sbjct: 70 FVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFS------GI 123
Query: 255 AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATY 314
++ L+ I+ LG+++ AL + ++P ++LKSY D+I + +EAA++DG
Sbjct: 124 LLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNR 183
Query: 315 LQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGI 374
LQII + +P+A+ G+ +V V F+ W +++ AS+ L A+ +TL G+
Sbjct: 184 LQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASN------FTLPVGLNALF 237
Query: 375 D-----WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W AA+L+ ALPV +M+ L++++I+SGLT GG+K
Sbjct: 238 STPDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVK 279
>pir||T35791 probable transmembrane sugar transport protein - Streptomyces
coelicolor >gi|3288624|emb|CAA19796.1| (AL031013)
putative transmembrane sugar transport protein
[Streptomyces coelicolor A3(2)]
Length = 279
Score = 126 bits (313), Expect = 5e-28
Identities = 79/214 (36%), Positives = 119/214 (54%), Gaps = 11/214 (5%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NSLI+A +++ V AAYA SR +F G+ V ++ TQ+ G I L+ L+ I
Sbjct: 71 NSLIVAGAATVCSVVIAVFAAYAVSRYEFRGKR-VFSVTVLSTQMFPG--ILFLLPLFLI 127
Query: 264 MVKLG------LFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
V +G LF L L Y S+PF+ W+L Y DS+ D DEAAL+DG L+
Sbjct: 128 YVNIGNATGIALFGSRGGLILTYLTFSLPFSIWMLIGYFDSVPRDLDEAALVDGCGPLRA 187
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWN 377
+ V++P A+PGI VAV +F+ W E + AS++ A + L+V + + WN
Sbjct: 188 LFKVVVPAAIPGIVAVAVYAFMTAWGEVLFASVMTNDATRTLAVGLQGY--STQNDVYWN 245
Query: 378 YFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA+L+ ++PV F+L Q+Y+ +GLT G +K
Sbjct: 246 QIMAASLVVSVPVVAGFLLLQRYLVAGLTAGAVK 279
>sp|Q04699|MALD_STRPN MALTODEXTRIN TRANSPORT SYSTEM PERMEASE PROTEIN MALD
>gi|479208|pir||S32571 malD protein - Streptococcus
pneumoniae >gi|153725|gb|AAA26927.1| (L08611) MalD
[Streptococcus pneumoniae]
Length = 277
Score = 125 bits (312), Expect = 7e-28
Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 5/209 (2%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
N+LI+AL+T+ + +V A YA+SR F R+ L F+L+ V +A L A + +
Sbjct: 72 NTLIIALITMAVQTSIIVLAGYAYSRYNFLARKQSLVFFLIIQMVPT---MAALTAFFVM 128
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
+ L N L +Y G +P N WL+K Y D++ DE+A +DGA + + ++L
Sbjct: 129 ALMLNALNHNWFLIFLYVGGGIPMNAWLMKGYFDTVPMSLDESAKLDGAGHFRRFWQIVL 188
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGIDWNYFAAA 382
P+ P +A A+ +F+G + ++IL+S LL E+ ++V + T + + + YF+A
Sbjct: 189 PLVRPMVAVQALWAFMGPFGDYILSSFLLREKEYFTVAVGLQTFVNN-AKNLKIAYFSAG 247
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+L ALP+ ++F QK SGLT GG K
Sbjct: 248 AILIALPICILFFFLQKNFVSGLTSGGDK 276
>pir||T46752 inner membrane protein malG [validated] - Thermococcus litoralis
>gi|2828822|gb|AAC38138.1| (AF012836) inner membrane
protein MalG [Thermococcus litoralis]
Length = 278
Score = 124 bits (308), Expect = 2e-27
Identities = 76/214 (35%), Positives = 116/214 (53%), Gaps = 9/214 (4%)
Query: 201 HLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYL---MFTQVAGGLGIAGL 257
+LKNS+I+A L T+ AAYA SR++F GR + F L MF Q++ + G
Sbjct: 69 YLKNSIIIASLVTLTTVSISSLAAYAVSRIEFKGRLLIPIFVLGLSMFPQIS----LVGY 124
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
L+ + KLG N AL Y A ++P + W+L SY + D DEAA+IDGA+ ++
Sbjct: 125 --LFKFIEKLGWVNTYQALYFPYVAWTLPLSLWILLSYFSQLPKDLDEAAMIDGASRIKT 182
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWN 377
+ ++LP++ P + + A++ FI + EF+ A L L G+ I W
Sbjct: 183 LTTIILPLSAPALFSTALLVFIAAFNEFMFALLFTTDHRARTVPVGIALFQGVHGEIPWG 242
Query: 378 YFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA+++ +P+ +M +L QKYI SGLT G LK
Sbjct: 243 SVMAASVISTIPLVIMALLFQKYIVSGLTAGALK 276
>sp|P18814|MALG_ENTAE MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
>gi|78247|pir||S05333 maltose transport inner membrane
protein malG - Enterobacter aerogenes
Length = 296
Score = 123 bits (306), Expect = 3e-27
Identities = 77/220 (35%), Positives = 125/220 (56%), Gaps = 19/220 (8%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
L NS+ +A +T + AYAF+R++F G+ +L L+F + L+ALY
Sbjct: 85 LWNSIKVAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPA---VLSLVALY 141
Query: 262 GIMVKLGLFNKLPAL----ALVYA-AGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
+ +LG + L +++A G + + W +K Y ++I+ +EAA +DGAT Q
Sbjct: 142 ALFDRLGQYLPFVGLNTHGGVIFAYMGGIALHVWTIKGYFETIDGSLEEAAALDGATPWQ 201
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID- 375
R VL+P+++P +A V ++SFI TE +ASLLL N YTL G+ + ++
Sbjct: 202 AFRLVLVPLSVPILAVVFILSFIAAITEVPVASLLLRDVNS------YTLAVGMQQYLNP 255
Query: 376 ----WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W FAAA +L A+P+ V+F+LAQ+++ +GLT GG+K
Sbjct: 256 QNYLWGDFAAAAVLSAIPITVVFLLAQRWLVNGLTAGGVK 295
>sp|P07622|MALG_ECOLI MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
>gi|72516|pir||MMECMG maltose transport inner membrane
protein malG - Escherichia coli
>gi|41951|emb|CAA26628.1| (X02871) put. mal G protein
(aa 1-296) [Escherichia coli] >gi|396367|gb|AAC43126.1|
(U00006) maltose transport inner membrane protein
[Escherichia coli] >gi|1790464|gb|AAC77002.1| (AE000476)
part of maltose permease, inner membrane [Escherichia
coli K12]
Length = 296
Score = 122 bits (302), Expect = 1e-26
Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 19/220 (8%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
L NS+ +A ++ + AYAF+R++F G+ +L L+F + L+ALY
Sbjct: 85 LWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPA---VLSLVALY 141
Query: 262 GIMVKLGLFNKLPAL----ALVYA-AGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
+ +LG + L +++A G + + W +K Y ++I+ +EAA +DGAT Q
Sbjct: 142 ALFDRLGEYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQ 201
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID- 375
R VLLP+++P +A V ++SFI TE +ASLLL N YTL G+ + ++
Sbjct: 202 AFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNS------YTLAVGMQQYLNP 255
Query: 376 ----WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W FAAA ++ ALP+ ++F+LAQ+++ +GLT GG+K
Sbjct: 256 QNYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVK 295
>sp|P26468|MALG_SALTY MALTOSE TRANSPORT SYSTEM PERMEASE PROTEIN MALG
>gi|280124|pir||A60175 maltose transport inner membrane
protein malG - Salmonella typhimurium
>gi|47775|emb|CAA38191.1| (X54292) malG [Salmonella
typhimurium] >gi|154172|gb|AAA27160.1| (M33921) inner
membrane protein (malG) [Salmonella typhimurium]
Length = 296
Score = 121 bits (301), Expect = 1e-26
Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 19/220 (8%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
L NS+ +A +T + AYAF+R++F G+ +L L+F + L+ALY
Sbjct: 85 LWNSVKIAGITAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPA---VLSLVALY 141
Query: 262 GIMVKLGLFNKLPAL----ALVYA-AGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
+ +LG + L +++A G + + W +K Y ++I+ +EAA +DGAT Q
Sbjct: 142 ALFDRLGQYIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQ 201
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID- 375
R VLLP+++P +A V ++SFI TE +ASLLL + YTL G+ + ++
Sbjct: 202 AFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVDS------YTLAVGMQQYLNP 255
Query: 376 ----WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W FAAA +L A+P+ ++F+LAQ+++ +GLT GG+K
Sbjct: 256 QNYLWGDFAAAAVLSAIPITLVFLLAQRWLVNGLTAGGVK 295
>pir||F75395 ABC transporter, permease protein, MalFG family - Deinococcus
radiodurans (strain R1)
>gi|6459197|gb|AAF11008.1|AE001988_4 (AE001988) ABC
transporter, permease protein, MalFG family [Deinococcus
radiodurans]
Length = 283
Score = 119 bits (296), Expect = 5e-26
Identities = 73/221 (33%), Positives = 118/221 (53%), Gaps = 10/221 (4%)
Query: 195 NSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYL---MFTQVAGG 251
N F +L NS+++A TV L+LL V AAYA + +F G+ ++Y L +F Q
Sbjct: 68 NGGFLRNLLNSVVVATGTVLLSLLLSVLAAYALGKFRFKGKSVLMYIILAVSVFPQ---- 123
Query: 252 LGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDG 311
IA L LY ++ GL+N L L Y ++PF W L S++ I + +EAA +DG
Sbjct: 124 --IAVLSGLYTMVKGFGLYNTWWGLILSYMIFTLPFTVWTLTSFVREIPTELEEAAYVDG 181
Query: 312 ATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILA-SLLLEQANQPLSVWIYTLMGGI 370
AT +Q + VLLP+ P + T +++FI W E++ A + + A + V I G
Sbjct: 182 ATPMQTLFQVLLPVMTPALVTTGLLAFINAWNEYLFALTFTSDNAASTVPVAIANFSGAT 241
Query: 371 GRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ AA+++ +P+ ++ ++ Q+ I SGLT G +K
Sbjct: 242 QYETPFGLTMAASVIVTVPLLLLVLVFQRNIVSGLTAGAVK 282
>sp|O32154|YURM_BACSU HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN YURM
>gi|7442794|pir||D70018 sugar permease homolog yurM -
Bacillus subtilis >gi|2635755|emb|CAB15248.1| (Z99120)
similar to sugar permease [Bacillus subtilis]
Length = 300
Score = 115 bits (284), Expect = 1e-24
Identities = 70/219 (31%), Positives = 110/219 (49%), Gaps = 20/219 (9%)
Query: 201 HLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIA---GL 257
+ NS+I+ LT +T+ AAY SR +F G+ L L GGL + L
Sbjct: 93 YFMNSVIVTALTCVITVFISAWAAYGLSRFEFKGKGFFLVLCL------GGLMLTPQVSL 146
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
+ LY I+ LGL+N AL L YAA +PF L++SY SI+ + +EAA +DG T +
Sbjct: 147 VPLYSIIQSLGLYNTYWALILPYAAYRIPFTIILIRSYFLSISKELEEAAYLDGCTSFGV 206
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGI-----GR 372
+ LPM++P + T +++ W EF+ A + ++ N + T+ G+
Sbjct: 207 FFRIFLPMSVPILVTSGILTAYHTWNEFMFAIIFIDDEN------LRTIPAGLMQFRDAL 260
Query: 373 GIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
DW A + A P+ ++F+L QKY G+ G +K
Sbjct: 261 QTDWGVLLAGLTISAAPIIILFLLMQKYFVRGIASGSVK 299
>pir||C71369 probable sugar ABC transporter, permease protein (y4oR) - syphilis
spirochete >gi|3322335|gb|AAC65071.1| (AE001192) sugar
ABC transporter, permease protein (y4oR) [Treponema
pallidum]
Length = 273
Score = 114 bits (282), Expect = 2e-24
Identities = 64/211 (30%), Positives = 109/211 (51%), Gaps = 9/211 (4%)
Query: 200 HH----LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIA 255
HH L NSL++ L + +++ AAYA R ++ G++ + L+ + +
Sbjct: 65 HHFGRALYNSLVVTLSSTVVSVSAGAAAAYAMQRFRYRGKKAITVALLLLRVIP---PVV 121
Query: 256 GLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
+I ++ LGL N L LALVY A +VPFN W++ +++ I P DE+A +DG ++
Sbjct: 122 LVIPIFVWWTALGLVNSLAGLALVYGALNVPFNVWVITTFVAEIPPSLDESAKLDGCSHW 181
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID 375
I +++P+ P +A V++ +F W E++L L + + L V + + G++
Sbjct: 182 MIFTRIVMPLITPALALVSIFTFRFAWNEYMLGFALTNRKTRTLPVALSLFL--TDSGVE 239
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLT 406
W AA L A+P V A KY+ GLT
Sbjct: 240 WGRITAAATLIAIPACVFTFAAAKYLVVGLT 270
>emb|CAB90877.1| (AL355752) putative maltose permease [Streptomyces coelicolor
A3(2)]
Length = 303
Score = 114 bits (282), Expect = 2e-24
Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 8/216 (3%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
FF LK+SLI++L T + +L YA SR++F G +++ L+ TQ+ IA L
Sbjct: 93 FFDWLKSSLIVSLGTTVIGVLVAATTGYAVSRMRFPGYRKLMWV-LLVTQM---FPIAVL 148
Query: 258 IA-LYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
I +Y I+ KL L + L LVY + +VP+ WLLK Y D+I + DEA +DG T
Sbjct: 149 IVPMYQILSKLQLIDNYFGLILVYCSTAVPYCAWLLKGYFDTIPFEIDEAGRVDGLTPFG 208
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILAS-LLLEQANQPLSVWIYTLMGGIGRGID 375
++LP+A PG+A SFI + E AS +L +V + + +
Sbjct: 209 TFFRLILPLARPGLAVAGFYSFITAFGEVAFASTFMLSDTKYTFAVGLQSFVS--EHDAQ 266
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
N AA +L A+PV F L QK + +GLT GG K
Sbjct: 267 RNLMAATAVLVAIPVSAFFYLVQKNLVTGLTAGGTK 302
>pir||H72282 maltose ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981754|gb|AAD36277.1|AE001777_3
(AE001777) maltose ABC transporter, permease protein
[Thermotoga maritima]
Length = 823
Score = 114 bits (282), Expect = 2e-24
Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 18/225 (8%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F+ + NS+I++L+ +T AAY FSR++FFGR + + L+ G + +
Sbjct: 607 FWLWVLNSVIVSLIVAFITTTVCAIAAYPFSRMRFFGRRYGIMALLLIQMFPG---VIFM 663
Query: 258 IALYGIMVKLGLF------NKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDG 311
IA+Y ++ +G + + L L Y ++ +N +L+K + D+I +EAA++DG
Sbjct: 664 IAIYDLLNFMGKYIPFIGIDTLGGLIFAYLT-NIAYNMYLIKGFYDTIPTSLEEAAIVDG 722
Query: 312 ATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTL-MGGI 370
AT Q +++P+A P + V ++ FIG + E+++A ++L+ + Y L +
Sbjct: 723 ATRFQSFYKIIIPLARPILTVVFLLVFIGTFNEYVVARIILQNVRH----YTYALGLQAF 778
Query: 371 GRG---IDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
G +W F AA LL P+ ++F+ Q+Y+ SGLT G +KE
Sbjct: 779 ATGPYETEWGLFTAAALLGMTPMVILFLSLQRYLVSGLTRGAVKE 823
>emb|CAB94619.1| (AL359214) putative sugar transporter integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 276
Score = 113 bits (280), Expect = 4e-24
Identities = 61/215 (28%), Positives = 117/215 (54%), Gaps = 6/215 (2%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F+ ++ NSLI+ + V +L+ + ++A +R++F GR + +++ + +
Sbjct: 66 FWTYVSNSLIVTVCAVVFSLVIALAGSFALARMRFKGRRGFIVGFMLAQMAPWEVMV--- 122
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
IA+Y I+ + N L L L Y +PF L+ ++ ++ + +E+A++DG T Q
Sbjct: 123 IAIYMIVRDASMLNSLVPLTLFYMMMILPFTILTLRGFVAAVPKELEESAMVDGCTRAQA 182
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQA-NQPLSVWIYTLMGGIGRGIDW 376
R V+LP+ PG+ + ++ FI W E L ++ ++A +Q L +W+ + G +W
Sbjct: 183 FRRVILPLLAPGLMSTSMFGFITAWNELPLVLVVNKEAESQTLPLWLTSFQTVFGD--NW 240
Query: 377 NYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA+ LFA+P+ ++F+ Q+ SGLT G +K
Sbjct: 241 GATMAASSLFAIPILILFVYLQRKAVSGLTAGAVK 275
>dbj|BAB04965.1| (AP001511) unknown conserved protein [Bacillus halodurans]
Length = 273
Score = 113 bits (279), Expect = 5e-24
Identities = 69/221 (31%), Positives = 115/221 (51%), Gaps = 10/221 (4%)
Query: 195 NSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYL---MFTQVAGG 251
N F ++ NS +++ LT + + AAYA +RL G+ +L L MF Q
Sbjct: 60 NRPLFTYMMNSFVISSLTTLIAIACASLAAYALTRLPIKGKGLILGTVLAASMFPQ---- 115
Query: 252 LGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDG 311
IA + +Y + LGL N L + Y S+P W+L ++ I + +E+A +DG
Sbjct: 116 --IAIITPIYSFITDLGLRNSYFGLVIPYITISLPLAIWILATFFKKIPFELEESAKLDG 173
Query: 312 ATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIG 371
AT Q R ++ P+A PG+ T A++ FI W E++ A L + A++ +V + +
Sbjct: 174 ATPFQTFRKIIFPLAAPGVFTTAILVFIAAWNEYLFA-LTINTADRLRTVPVGLSLYESQ 232
Query: 372 RGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
I W AAT++ +P+ ++ +L Q+ I +GLT G +KE
Sbjct: 233 YTIPWGDITAATVIVTVPIVIIVLLFQRRIVAGLTSGSVKE 273
>emb|CAC11275.1| (AL445063) inner membrane protein of trehalose/maltose (MalG)
related protein [Thermoplasma acidophilum]
Length = 294
Score = 113 bits (279), Expect = 5e-24
Identities = 63/215 (29%), Positives = 118/215 (54%), Gaps = 5/215 (2%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
FF L N+LI + + + F + A +R G++ +LY L+ T + +
Sbjct: 84 FFTWLGNTLIFCTASTAIGIAFAIIAGIGMARFNIPGKKAILYMMLILTMFPF---VVMV 140
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
I LY + L L + L L Y G++ +++WL+ +Y++S+ D++EAA +DG T Q
Sbjct: 141 IPLYFMFATLHLIDTYQGLILAYTGGALIYSSWLIMNYVNSLPKDYEEAAQLDGLTQSQA 200
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGIDW 376
+ +L+PM+ P I +++F+G +T++ LA + + L++ +Y G +++
Sbjct: 201 LFRILVPMSRPVIIFAVLVAFMGPYTDYALAGQFITTPSMYTLAIGLYYTSTGT-VVMNY 259
Query: 377 NYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
N +AA ++L LP+F++F + QKY+ SG +L K
Sbjct: 260 NVYAAFSVLMGLPLFILFFVFQKYLVSGFSLATYK 294
>emb|CAB95277.1| (AL359779) putative sugar transport integral membrane protein
[Streptomyces coelicolor A3(2)]
Length = 275
Score = 112 bits (278), Expect = 7e-24
Identities = 75/213 (35%), Positives = 119/213 (55%), Gaps = 8/213 (3%)
Query: 201 HLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIAL 260
HL SL ++L V + L PAAY +R G ++ F + TQ+ G+ IA AL
Sbjct: 69 HLLTSLAVSLGAVAICLAISAPAAYGLARFGLRGSRTIV-FGTLITQMVPGIVIAN--AL 125
Query: 261 YGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRY 320
Y V LGL N L L A+ +PF+ L++S++ SI + EAA IDGA ++
Sbjct: 126 YNSYVDLGLVNSYFGLMLADASLGIPFSIVLMRSFMVSIPGEVIEAAQIDGAGPVRTFVR 185
Query: 321 VLLPMALPGIATVAVMSFIGGWTEFILA-SLLLEQANQPLSVWIYTLMGG-IGRGIDWNY 378
V+LPM+ + T + +F+ W++F+ A +L +P+++ IY +G +G DW
Sbjct: 186 VVLPMSRNSLITSGLFAFLFSWSDFMFALTLNTTDEVKPITLGIYQYIGAHVG---DWGS 242
Query: 379 FAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA++L A+P ++ +LAQKYI +G+T G +K
Sbjct: 243 VMAASVLSAVPAAILLVLAQKYIAAGITGGSVK 275
>pir||E72395 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4980777|gb|AAD35367.1|AE001710_2
(AE001710) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 281
Score = 111 bits (274), Expect = 2e-23
Identities = 73/212 (34%), Positives = 111/212 (51%), Gaps = 13/212 (6%)
Query: 199 FHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFG---REHVLYFYLMFTQVAGGLGIA 255
F +L+NS+++ + + + AAYA +R + G E ++ ++ I
Sbjct: 76 FPYLRNSIVVGVSVALIGTVISALAAYAIARYRVGGPFLAEWIISIRMLPP-------IV 128
Query: 256 GLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
+ LY I KL L N AL L + VP WLL S+ I + DEAA +DGAT
Sbjct: 129 SAVPLYVIFTKLRLINTWWALILSHLVIVVPLGVWLLISFFREIPREIDEAAYVDGATPF 188
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGI 374
Q YV+LP++ PG+A VAV+S I W EF+LA +L A Q L +++ + G +
Sbjct: 189 QAFFYVVLPLSAPGLAAVAVLSLIQSWGEFLLALVLTNDARAQTLPIFLGRYI--TGWRV 246
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLT 406
W +AA ++ LPV V ++AQ+Y+ GLT
Sbjct: 247 AWGPLSAAGIVTMLPVVVFALVAQRYLIRGLT 278
>gb|AAC44395.1| (U43526) ORF-4 [Streptococcus pneumoniae]
Length = 277
Score = 108 bits (268), Expect = 1e-22
Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 12/218 (5%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGR-EHVLYFYLMFTQVAGGLGIAG 256
F +++NSLI+AL T + ++ AAY R FF + ++ L+ T + +
Sbjct: 68 FIDNIRNSLIIALATTLIAIIISAMAAYGIVR--FFPKLGAIMSRLLVITYIFPPI---- 121
Query: 257 LIAL-YGIMV-KLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATY 314
L+A+ Y I + K+GL N L L +VY + SVP+ WLL + ++ +EAA IDGA
Sbjct: 122 LLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGANK 181
Query: 315 LQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRG 373
V+LP+ PGI A+ +FI W EF+ A +L+ + ++V + +L G
Sbjct: 182 FVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNG--SEI 239
Query: 374 IDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+DW AA+++ LP + F + Q I SGL+ G +K
Sbjct: 240 LDWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK 277
>sp|Q53683|YOE1_STRAT HYPOTHETICAL PROTEIN IN OLED 5'REGION (ORF1) >gi|421634|pir||S33182
probable transport protein - Streptomyces antibioticus
(fragment) >gi|296489|emb|CAA80299.1| (Z22577) membrane
protein [Streptomyces antibioticus]
Length = 229
Score = 107 bits (264), Expect = 3e-22
Identities = 69/220 (31%), Positives = 108/220 (48%), Gaps = 6/220 (2%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F H NSL++AL T +T+L P AY +R + + ++ L
Sbjct: 14 FAEQPLAHAALNSLLVALATAAVTVLIATPMAYVMARHRTKAARAATGWVVVSQAFPFVL 73
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
I I L+ ++ +L L + L L LVY S+PF W+L + ++ + +EAA +DGA
Sbjct: 74 LI---IPLFLVLKRLRLIDSLTGLVLVYVVWSLPFALWMLAGHARAVPAELEEAAAVDGA 130
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIG 371
++ + V +P+ PGIA A+ +F+ W EF A +LL+ + Q L V + +G
Sbjct: 131 GRVRTLTSVTVPLLAPGIAATALFAFVTAWNEFFFALVLLKSPHRQTLPVVLTHFIG--A 188
Query: 372 RGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
G+ + AA L LP F L Q+ I SGL G +K
Sbjct: 189 EGVPTSPAGAAAFLATLPSLAFFALVQRRITSGLLTGAVK 228
>pir||S75051 lactose transport system permease protein lacG - Synechocystis sp.
(strain PCC 6803) >gi|1652996|dbj|BAA17913.1| (D90910)
lactose transport system permease protein LacG
[Synechocystis sp.]
Length = 270
Score = 107 bits (264), Expect = 3e-22
Identities = 69/232 (29%), Positives = 117/232 (49%), Gaps = 20/232 (8%)
Query: 189 NLGKFV----NSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLM 244
NLG F+ + F +L NS++++ +TV L L F AAY +RL F GR+ L +
Sbjct: 49 NLGNFIKVWQDYPFGRYLFNSVVVSSITVALNLFFCALAAYPLARLNFVGRDMTLAAIVA 108
Query: 245 FTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFD 304
+ L +I LY + V LGL N + +++ + + F +LL+ + + +
Sbjct: 109 TLMIPFQLI---MIPLYILAVNLGLRNSY--VGIIFPSLASAFGIFLLRQAFQGVPKELE 163
Query: 305 EAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIY 364
EA IDG L I ++++P P + T+A+ FIG W++F+ ++L+Q Y
Sbjct: 164 EAGRIDGCRELGIWWHIMIPAIRPALVTLAIFVFIGAWSDFLWPLIVLDQPE------YY 217
Query: 365 TLMGGIGR-----GIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
TL G+ + DW AAA+++ P+ V+F+ Q+YI G+K
Sbjct: 218 TLPLGVAQLSSALDFDWRLIAAASVIAIAPIIVLFLFVQRYIIPSEASSGVK 269
>emb|CAB72404.1| (AL138978) putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 296
Score = 106 bits (263), Expect = 4e-22
Identities = 66/215 (30%), Positives = 113/215 (51%), Gaps = 7/215 (3%)
Query: 197 VFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAG 256
+ F L NSLIL LT++ V AAY SR R + +L+ A L I
Sbjct: 83 ITFTPLLNSLILCGGATLLTVVCAVLAAYPLSRF----RSRLNRPFLLTILFATSLPITA 138
Query: 257 L-IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
+ + +Y + V++ + + + +AA +PF WL+K+++D + + +EAA DGA+
Sbjct: 139 IMVPVYALFVRVNMIDTMQGTIFFFAASQLPFAIWLMKNFMDGVPKELEEAAWTDGASSF 198
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGI 374
Q + ++LP+ PG+A V V SF+ W F + +LL +Q P SV I G G +
Sbjct: 199 QSLLRIVLPLMGPGVAVVTVFSFVMMWGNFFVPFMLLLSPDQMPASVSINDFFGNRGM-V 257
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGG 409
+ AA +++++ PV ++++L + + G LGG
Sbjct: 258 AYGQLAAFSIVYSTPVVLLYVLISRRLGGGFALGG 292
>dbj|BAA02472.1| (D13178) TVG [Thermoactinomyces vulgaris]
>gi|8777460|dbj|BAA97039.1| (AB029554) E. coli
MalG-homolog protein~ORF -1 [Thermoactinomyces vulgaris]
Length = 162
Score = 106 bits (262), Expect = 5e-22
Identities = 60/156 (38%), Positives = 94/156 (59%), Gaps = 2/156 (1%)
Query: 257 LIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
++A+Y ++ L L + L L YA +PFNTWL+K Y D+I DEAA IDGA +L
Sbjct: 7 MVAIYLLLNMLHLLDTHLGLLLFYAGTQIPFNTWLVKGYFDTIPHSLDEAARIDGAGHLT 66
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGID 375
I V+LP+A P +A V + +F+G T+F+L ++L +Q L+V +++ + +
Sbjct: 67 IFWKVILPLAKPILAVVFLFNFMGPMTDFLLPQIILTSPEHQTLAVGLFSFINDDFKK-Q 125
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ FAA ++L ALP+ V+F+ Q+ SGLT G K
Sbjct: 126 YTLFAAGSVLIALPITVIFLSLQRCFISGLTAGASK 161
>gb|AAG09708.1|AF218837_3 (AF218837) unknown [Pasteurella multocida]
Length = 277
Score = 106 bits (262), Expect = 5e-22
Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 10/217 (4%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F ++KNSL ++L+T + + AAY R FF + + L+ T + L
Sbjct: 68 FIVNIKNSLFISLVTTVIAITISSMAAYGIVR--FFPKLGSIMSKLLVTTY---IFPPIL 122
Query: 258 IAL-YGI-MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
+A+ Y I M K+GL N L +VY + SVP+ WLL + ++ + +EAA IDGA
Sbjct: 123 LAIPYSIAMAKVGLTNTTTGLIVVYLSFSVPYAVWLLVGFFQTVPIEIEEAAKIDGANKF 182
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGI 374
+ ++LP+ PGI A+ +FI W EF+ A +L+ + + ++V + +L G +
Sbjct: 183 TVFFKIVLPLVAPGIVATAIYTFINAWNEFLYALILVNDTSKMTVAVALRSLNG--AEIL 240
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
DW AA++L +P + F Q I SGL+ G +K
Sbjct: 241 DWGDMMAASVLVVIPSVIFFCFIQNKIASGLSEGSVK 277
>emb|CAA68974.1| (Y07706) putative maltose permease [Streptomyces coelicolor]
Length = 302
Score = 106 bits (261), Expect = 7e-22
Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 9/216 (4%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
FF LK+SLI++L T + +L A SR++F G +++ L+ TQ+ IA L
Sbjct: 93 FFDWLKSSLIVSLGTTVIGVLVAATTATR-SRMRFPGYRKLMWV-LLVTQM---FPIAVL 147
Query: 258 IA-LYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
I +Y I+ KL L + L LVY + +VP+ WLLK Y D+I + DEA +DG T
Sbjct: 148 IVPMYQILSKLQLIDNYFGLILVYCSTAVPYCAWLLKGYFDTIPFEIDEAGRVDGLTPFG 207
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILAS-LLLEQANQPLSVWIYTLMGGIGRGID 375
++LP+A PG+A SFI + E AS +L +V + + +
Sbjct: 208 TFFRLILPLARPGLAVAGFYSFITAFGEVAFASTFMLSDTKYTFAVGLQSFVS--EHDAQ 265
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
N AA +L A+PV F L QK + +GLT GG K
Sbjct: 266 RNLMAATAVLVAIPVSAFFYLVQKNLVTGLTAGGTK 301
>pir||T47063 hypothetical protein [imported] - Yersinia pestis
>gi|4106651|emb|CAA21406.1| (AL031866) ORF81, len=275
aa, highly similar to Pseudomonas fluorescens MtlG
(mtlG), 39.5% identity in 258 aa overlap, Fasta scores:
opt: 689,E():0, also similar to E. coli MalG protein
35.3% identity in 266 aa overlap, Fasta scores: opt:
626, E(): 0. >
Length = 275
Score = 106 bits (261), Expect = 7e-22
Identities = 66/217 (30%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 195 NSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGI 254
N F NSL+++L++ L L ++ A +A+ + F R+ ++M + A + +
Sbjct: 65 NGDFIRAFGNSLLISLVSTFLCL--ILGALFAYGLVFFIERKGRAKQFIMSLRYAPVIML 122
Query: 255 AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATY 314
+I +Y ++ KLG+ + L LVY +VPF ++ ++ + I P+ EAA +DGA+
Sbjct: 123 --VIPVYYLITKLGMTDNYLVLILVYTVANVPFTILMVTTFFEDIPPEIREAARVDGASE 180
Query: 315 LQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGI 374
++ V+LP+A G+A V++ W EF + L + Q L V I + + +G
Sbjct: 181 WRVFLSVMLPLARTGLAASGVLTLFFIWNEFQIVLTLSGDSTQTLPVAITSFL--TFQGT 238
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+W AA L LP+ V+ +L QK++ GLT+GG+K
Sbjct: 239 EWGPLTAAGTLVMLPMLVLGLLVQKHLVRGLTMGGVK 275
>sp|P55603|Y4OR_RHISN PROBABLE ABC TRANSPORTER PERMEASE PROTEIN Y4OR
>gi|2182562|gb|AAB91804.1| (AE000089) Y4oR [Rhizobium
sp. NGR234]
Length = 277
Score = 104 bits (258), Expect = 1e-21
Identities = 59/216 (27%), Positives = 110/216 (50%), Gaps = 10/216 (4%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F ++ NS ++ +++V L + PAAYA + + R L ++ ++ G+ I
Sbjct: 70 FQKYIINSAVVTIVSVVLVIAVSAPAAYALAHVT--KRGGTLLVAILVARIIPGIAIG-- 125
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
+ +Y + +L + AL ++ A ++PF WL++S+ ++P EAA+ DG + Q+
Sbjct: 126 VPVYLLATRLHQLDTYQALIIINVAVNIPFAIWLMRSFFMEVHPTLREAAISDGCSEWQV 185
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN--QPLSVWIYTLMGGIGRGID 375
+++P+ L G+ AV FI W EF+ A +L + PL++ + G+
Sbjct: 186 FTKIMMPLVLGGMLATAVFVFIAVWNEFLFALILTTSVSPTAPLAMLGFRTQ----YGVQ 241
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W+ AA L + PV + Q+Y+ GLT+G +K
Sbjct: 242 WDAVGAAAFLVSTPVIAFAFIMQRYLVQGLTMGSVK 277
>sp|O58760|YJ16_PYRHO HYPOTHETICAL ABC TRANSPORTER PERMEASE PROTEIN PH1036
>gi|7442815|pir||H71096 probable maltose transport inner
membrane protein - Pyrococcus horikoshii
>gi|3257451|dbj|BAA30134.1| (AP000004) 276aa long
hypothetical maltose transport inner membrane protein
[Pyrococcus horikoshii]
Length = 276
Score = 104 bits (258), Expect = 1e-21
Identities = 60/204 (29%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
LKNSLI+A+ + + ++ AAYAF+R F + ++ F ++ + + + + LY
Sbjct: 70 LKNSLIVAIPSTIVPVIVASLAAYAFARYSFPIKHYLFAFIVLLMALPQQMTV---VPLY 126
Query: 262 GIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYV 321
++ L N L +V++A + + + +++Y + D +EAA IDGAT QI +
Sbjct: 127 FLLRNAHLLNTFRGLIIVHSAWGLAWIIFFMRNYFSMLPTDVEEAAKIDGATDFQIFYKI 186
Query: 322 LLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAA 381
+LPMALPG+ + +++ F W++F LA + L+ + ++ L+ G +DW A
Sbjct: 187 VLPMALPGLISASILQFTWVWSDFFLALVFLQNPEKYVATQRLPLLRG-QYFVDWGLLTA 245
Query: 382 ATLLFALPVFVMFMLAQKYIRSGL 405
A+++ L +++ L QKY SG+
Sbjct: 246 ASIMVMLVPLLVYALFQKYYISGM 269
>pir||D70952 probable sugar - Mycobacterium tuberculosis (strain H37RV)
>gi|2695823|emb|CAA15893.1| (AL021006) sugB
[Mycobacterium tuberculosis]
Length = 274
Score = 104 bits (257), Expect = 2e-21
Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 4/222 (1%)
Query: 191 GKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAG 250
G F +F L NS+ + L+T + ++ AAYA +RL+F G+ ++ L+ T
Sbjct: 55 GIFRGDLFSSALINSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPS 114
Query: 251 GLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALID 310
I+ + L+ I +GLF+ P L L Y ++P + L ++ I D ++AA +D
Sbjct: 115 ---ISLVTPLFNIERAIGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMD 171
Query: 311 GATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILA-SLLLEQANQPLSVWIYTLMGG 369
GAT Q R V++P+A PG+ T A++ FI W + +LA SL +A V I G
Sbjct: 172 GATPGQAFRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGS 231
Query: 370 IGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA ++ +P+ V ++ Q+ I +GLT G +K
Sbjct: 232 SQFEEPTGSIAAGAIVITIPIIVFVLIFQRRIVAGLTSGAVK 273
>emb|CAB72190.1| (AL138851) putative sugar transporter inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 281
Score = 103 bits (255), Expect = 3e-21
Identities = 67/217 (30%), Positives = 109/217 (49%), Gaps = 11/217 (5%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F F + NSLI+A V + L AA A +R +F R +L +L+ V
Sbjct: 66 FEQQEFGRYFLNSLIVAGSVVIASALIAFLAATAVTRFRFRFRTTLLIMFLVAQMVPVE- 124
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
A I L+ +M G N L +L L + A S+PF W+L+ ++ ++ +EAA IDGA
Sbjct: 125 --ALTIPLFFLMRDFGQLNTLGSLILPHIAFSLPFAIWMLRGFVKAVPEALEEAAYIDGA 182
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL----EQANQPLSVWIYTLMG 368
+ + + +L P+ LPG+ +V SFI W +F+ A + Q+ P+++ ++
Sbjct: 183 SRTRFLWQILFPLVLPGLVATSVFSFISTWNDFLFAKSFIISDTSQSTLPMALLVFYKPD 242
Query: 369 GIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGL 405
DW AA+ + +PV V F+L Q+ + SGL
Sbjct: 243 ----DPDWGGVMAASTVMTIPVLVFFVLVQRRLVSGL 275
>dbj|BAB03316.1| (AB011415) AlgM2 [Sphingomonas sp.]
Length = 293
Score = 103 bits (255), Expect = 3e-21
Identities = 69/231 (29%), Positives = 122/231 (51%), Gaps = 20/231 (8%)
Query: 195 NSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGI 254
+ +F+ N++ + V +L+F+VP AYA S+ + GR V F + FT
Sbjct: 70 DKLFWTSYANTIFYTVFGVVTSLIFIVPGAYALSKPRIRGRR-VFGFIIAFTMWFN---- 124
Query: 255 AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATY 314
AG+I + M LGL + + + +A + FN L+++Y +SI+ F+EAA +DGA
Sbjct: 125 AGMIPFFLNMRDLGLLDNRFGILIGFACNA--FNIILMRNYFESISASFEEAARMDGAND 182
Query: 315 LQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRG 373
LQI+ V +P+A P +AT+ ++ I W + A +LL + PL V++ + +
Sbjct: 183 LQILWKVYIPLAKPALATITLLCAISRWNGYFWAMVLLRAEEKIPLQVYLKKTIVDLNVN 242
Query: 374 IDW------NYFAAATLLFA------LPVFVMFMLAQKYIRSGLTLGGLKE 412
++ N ++ T++ A +PV +++ + QKY G+ LGG+KE
Sbjct: 243 EEFAGALLTNSYSMETVVGAIIVMSIIPVIIVYPVVQKYFTKGVMLGGVKE 293
>dbj|BAB07566.1| (AP001520) ABC transporter (permease) [Bacillus halodurans]
Length = 273
Score = 103 bits (254), Expect = 4e-21
Identities = 61/214 (28%), Positives = 108/214 (49%), Gaps = 11/214 (5%)
Query: 201 HLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGI---AGL 257
+L N+L L + L+ L Y S+ KF G + + FT + G+ I + L
Sbjct: 67 NLLNTLYLVIPATILSALLGSLNGYVLSKWKFKGADWI------FTAILFGMFIPYQSIL 120
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
I L + ++ L+N +P L LV+ +P T + +++ +I + E+A +DGA + +I
Sbjct: 121 IPLIQFLREVNLYNTIPGLILVHVVYGIPITTLMFRNFYANIPKEMLESAQVDGAGFFRI 180
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWN 377
R+++ P+++ G V + F W EF+ A + + QP+ V + L G + + WN
Sbjct: 181 YRHIMFPLSITGFVVVGIWQFTNIWNEFLFAVSITTTSQQPVMVALQNLSG--SQIVQWN 238
Query: 378 YFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A LL ALP +++++ KY GL G +K
Sbjct: 239 VQMAGALLAALPTLLVYIILGKYFVRGLLAGSVK 272
>pir||B75208 transmembrane sugar transport protein PAB2231 - Pyrococcus abyssi
(strain Orsay) >gi|5457622|emb|CAB49113.1| (AJ248283)
TRANSMEMBRANE SUGAR TRANSPORT PROTEIN [Pyrococcus
abyssi]
Length = 289
Score = 102 bits (252), Expect = 7e-21
Identities = 88/298 (29%), Positives = 144/298 (47%), Gaps = 38/298 (12%)
Query: 133 RGRIEGVLTITKINRDSSIGFGIIKDAKVSGSINGN----EISGVLRPIIVRNKGEAKLT 188
RG + +L I IGFG++ + S ++ N + L I +G+ +T
Sbjct: 10 RGELVLILAIFLATLPLIIGFGLLMLSSFSTNMITNFDFSQFHLTLENWINVFQGKLAIT 69
Query: 189 NLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQV 248
G VN + N+LI+AL L L V + YA SR+ F GR+ ++ ++
Sbjct: 70 G-GVRVNMARI--ILNTLIVALGVSGLVTLISVMSGYALSRMDFKGRKILIVSLMLLHAF 126
Query: 249 AGGLGIAGLIALYGIMVKLGLFNKLPALALVY---------AAGSVPFNTWLLKSYIDSI 299
G I G+ LY I F++ P+L +Y AA VP + WL+K + D++
Sbjct: 127 PGVALIVGVYLLYRIS-----FSQEPSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDTV 181
Query: 300 NPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFI-LASLLLEQANQP 358
+F+ + +IDGA+ + + R ++LP+ PGI VA+ SF+ GW + I + + L++Q
Sbjct: 182 PWEFEWSGIIDGASRITVWRKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ---- 237
Query: 359 LSVWIYTLMGGIGRGIDWNY-----FAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
TL I I+ Y AAA L+ LP + F+ AQ+ + G + GG+K
Sbjct: 238 ------TLATFIEANIEAEYTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIK 288
>pir||D72378 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4980926|gb|AAD35505.1|AE001721_4
(AE001721) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 283
Score = 102 bits (251), Expect = 1e-20
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
N+ +LAL + + + YA SR F GR ++ F L I+ + A++ +
Sbjct: 79 NTALLALGVMGVEVAITSLGGYALSRYDFPGRSSMMKFILALHAFPA---ISLMTAVFYL 135
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
+ L L + L + L+ A+ VP+ TW++K + D I + + A L+DG + Q+ R VLL
Sbjct: 136 LWTLKLLDTLWGVILLKASLEVPWGTWIMKGFYDGIPWELEWAGLVDGYSRFQVWRRVLL 195
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDWNYFAAA 382
P+ PGIA A+ +F+ GW+EF+ + + N LS ++ +G R D+ A
Sbjct: 196 PLVKPGIAVTAIFAFLSGWSEFVFVNTFIFSQNLWTLSKYVKGFIGDY-RFADYGLVTAV 254
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
L + +P + F K++ LT+GG+K
Sbjct: 255 GLFYMIPTIIFFFFVSKHMIK-LTIGGVK 282
>pir||E75187 sugar abc transporter, permease protein PAB2335 - Pyrococcus abyssi
(strain Orsay) >gi|5457457|emb|CAB48948.1| (AJ248283)
SUGAR ABC TRANSPORTER, PERMEASE PROTEIN [Pyrococcus
abyssi]
Length = 277
Score = 101 bits (250), Expect = 1e-20
Identities = 61/209 (29%), Positives = 111/209 (52%), Gaps = 7/209 (3%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
+KNS+I+A+LT+ ++ L +PA YA +R F G++ + + + L+ LY
Sbjct: 72 IKNSIIVAVLTIIISFLLGIPAGYAIARYVFKGKDTIKLSIVALRMFPIPVMAIPLVVLY 131
Query: 262 GIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYV 321
+KL L + L +AL + A ++PF + S ++ + +EA ++ G T + +
Sbjct: 132 ---IKLNLIDTLLGVALAHTAMALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGAFKSI 188
Query: 322 LLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFA- 380
LP+ALPG+A A+ +F+ W E +AS+L + N+ L I +++ G G Y+
Sbjct: 189 TLPLALPGLAAAAMFTFVMSWNEVFVASILTLK-NRTLPAQILSIVAGAAGGAAPAYYKF 247
Query: 381 AATLLFALPVFVMFMLAQKYIRS--GLTL 407
AA + LP + A++Y+ + G+TL
Sbjct: 248 AAAFIMILPAMLFIFFARRYLVTMWGITL 276
>pir||T35672 probable transmembrane transport protein - Streptomyces coelicolor
>gi|2661679|emb|CAA15784.1| (AL009199) probable
transmembrane transport protein [Streptomyces coelicolor
A3(2)]
Length = 302
Score = 101 bits (248), Expect = 2e-20
Identities = 68/221 (30%), Positives = 114/221 (50%), Gaps = 12/221 (5%)
Query: 189 NLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQV 248
N+GK+ NS+I+ + + L +L AY +R +F GR L +Y+M +
Sbjct: 90 NIGKY--------FLNSVIVVVSALILVMLLGAMCAYVLARFEFPGRR--LIYYVMLAGL 139
Query: 249 AGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAAL 308
+ +A ++ L+ + GL N P L L Y A ++PF + L S+ S+ D EAAL
Sbjct: 140 TFPVFLA-IVPLFFQLQNFGLLNTRPGLILTYVAFALPFTMFFLYSFFRSLPHDVYEAAL 198
Query: 309 IDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFIL-ASLLLEQANQPLSVWIYTLM 367
IDGA + V+LPMA PG+A VA+ +F+G W +F+L +L +Q L+ +
Sbjct: 199 IDGAGDWRAFFQVMLPMARPGMAAVAIFNFLGLWNQFLLPVALNTDQDKWVLTQGMAAYA 258
Query: 368 GGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLG 408
ID+ AA ++ +PV +++ + Q+ I ++ G
Sbjct: 259 SSQVYDIDYGALFAAIVVTVVPVLLVYCVFQRRIAGSVSQG 299
>pir||D71220 probable sugar transport membrane protein - Pyrococcus horikoshii
>gi|3256408|dbj|BAA29091.1| (AP000001) 277aa long
hypothetical sugar transport membrane protein
[Pyrococcus horikoshii]
Length = 277
Score = 101 bits (248), Expect = 2e-20
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 7/209 (3%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
+KNS+I+A LT+ ++ + +PA YA +R F G++ + + + L+ LY
Sbjct: 72 IKNSVIVATLTIIISFILGIPAGYAIARFAFKGKDTIKLSIVALRMFPIPVMAIPLVVLY 131
Query: 262 GIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYV 321
+KL L + L +AL + A ++PF + S ++ + +EA ++ G T R +
Sbjct: 132 ---IKLKLIDTLFGVALAHTAMALPFVVLITSSIFAGVDKELEEAGMVFGLTRWGAFRNI 188
Query: 322 LLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFA- 380
LP+ALPG+A A+ +F+ W E +AS+L + N+ L I +++ G G Y+
Sbjct: 189 TLPLALPGLAAAAMFTFVMSWNEVFVASILTLK-NRTLPAQILSIVAGAAGGAAPAYYKF 247
Query: 381 AATLLFALPVFVMFMLAQKYIRS--GLTL 407
AA + LP + A++Y+ + G+TL
Sbjct: 248 AAAFIMTLPAMLFIFFARRYLVTMWGITL 276
>pir||T45203 probable transport protein malg [imported] - Mycobacterium leprae
>gi|699148|gb|AAA62914.1| (U15180) maltose transport
inner membrane protein [Mycobacterium leprae]
Length = 296
Score = 100 bits (247), Expect = 3e-20
Identities = 69/222 (31%), Positives = 111/222 (49%), Gaps = 4/222 (1%)
Query: 191 GKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAG 250
G F + +F L NS+ + L T + ++F AAYA +RL F G+ ++ L+ T
Sbjct: 77 GIFRSDLFSSALINSIGIGLTTTVIAVMFGAMAAYAIARLAFPGKRLLVGTTLLVTMFPA 136
Query: 251 GLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALID 310
I+ + L+ I ++GLF+ L L Y ++P + L ++ I D ++AA +D
Sbjct: 137 ---ISLVTPLFNIERRVGLFDTWAGLILPYITFALPLAIYTLSAFFAEIPWDLEKAAKMD 193
Query: 311 GATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILA-SLLLEQANQPLSVWIYTLMGG 369
GAT Q R V++P+A PG+ T A++ FI W + +LA SL +A V I G
Sbjct: 194 GATSGQAFRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTSTKAAITAPVAITNFTGS 253
Query: 370 IGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA ++ P+ V + Q+ I +GLT G +K
Sbjct: 254 SQFEEPTGSIAAGAIVITAPIIVFVWIFQRRIVAGLTSGAVK 295
>emb|CAB59597.1| (AL132662) probable sugar transport inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 299
Score = 99.5 bits (244), Expect = 6e-20
Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 8/218 (3%)
Query: 195 NSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGI 254
N++F NSLI++ +TV L+F A YAF+R++F G ++ L V L
Sbjct: 88 NAMFPRWFVNSLIVSAVTVAANLVFGSLAGYAFARMRFAGSRVLMGLMLATMAVPFQLT- 146
Query: 255 AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATY 314
+I + +M KLGL + L AL + + PF +LL+ + S+ + +EAA IDG +
Sbjct: 147 --MIPTFLVMKKLGLIDTLGAL--IVPSLVTPFAVFLLRQFFLSLPRELEEAAWIDGCSR 202
Query: 315 LQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRG 373
L+++ ++LP++ P +ATVAV++F+ W + + + Q L + + T G
Sbjct: 203 LRVLWRIVLPLSRPALATVAVLTFLTTWNDLTWPLIAINHDTQYTLQLGLTTFQG--QHH 260
Query: 374 IDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W A ++ LPV + F+ AQK +T GLK
Sbjct: 261 TQWAAVMAGNVITVLPVLLAFLGAQKTFIQSITSSGLK 298
>pir||C82557 ABC transporter sugar permease XF2446 [imported] - Xylella
fastidiosa (strain 9a5c)
>gi|9107639|gb|AAF85245.1|AE004053_8 (AE004053) ABC
transporter sugar permease [Xylella fastidiosa]
Length = 278
Score = 99.1 bits (243), Expect = 8e-20
Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 18/214 (8%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NSL+++L ++LF A YAF++L+F GRE V F L+ T + +A ++ L+ +
Sbjct: 76 NSLLVSLSITFGSVLFNTMAGYAFAKLRFAGRERV--FQLLLTALVIPAQVA-MLPLFLL 132
Query: 264 MVKLGLFNK-----LPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQII 318
M L L + +PALA V F +L++ Y+ I D EAA IDGA+ ++I
Sbjct: 133 MKHLHLVDSFAGVIMPALATV-------FGIFLVRQYVRGIPNDLIEAARIDGASEMRIF 185
Query: 319 RYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGIDWN 377
++LPM P + T+ +F+ W +F+ ++L +QA+ L V + L +D
Sbjct: 186 FQIVLPMLKPVLVTLITFTFMASWNDFMWPLIVLTDQAHYTLPVTLAAL--AREHVMDIE 243
Query: 378 YFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A ++ LPV ++FML Q+Y GL LG +K
Sbjct: 244 MMMAGAVVTVLPVLLLFMLLQRYYIQGLLLGSVK 277
>sp|P40980|YOR2_CALSR HYPOTHETICAL 30.9 KD PROTEIN IN XYLR 5'REGION (ORF2)
>gi|632073|pir||S41786 probable sugar transport protein
2 - thermophilic bacterium RT8.B4
>gi|311187|gb|AAB42042.1| (L18965) putative membrane
bound sugar transport protein; ORF2
[Caldicellulosiruptor sp. Rt8B.4]
Length = 275
Score = 97.1 bits (238), Expect = 3e-19
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 16/229 (6%)
Query: 189 NLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQV 248
N + FF +LKNS+I ++V L L+ AA+AFSR KF L+++ +
Sbjct: 56 NFSTVLEGNFFTYLKNSVIAVSISVVLILIISSMAAFAFSRFKFALNN------LLYSLI 109
Query: 249 AGGLGI---AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDE 305
G+ I LI +Y + K+ L++ + AL Y A S+P + ++L ++ I + +E
Sbjct: 110 IAGMAIPIHVTLIPIYVLTNKIKLYDTVFALIGPYVALSLPMSIFILTEFMREIPLELEE 169
Query: 306 AALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ---PLSVW 362
AA IDG + ++ +LLP++ P + TV + + W EF+ A +L + PL +W
Sbjct: 170 AAKIDGCSMFRLYSDILLPLSAPALITVGIYNGTYLWNEFVFALVLTSSPTRRTLPLGIW 229
Query: 363 IYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ G D A L LP+ + ++ Q I G+ G +K
Sbjct: 230 DFQAR----YGSDIPAIMAFLTLSLLPMLIAYIFGQDKIIKGMMAGAVK 274
>pir||B71243 probable maltose transport system permease protein - Pyrococcus
horikoshii >gi|3256590|dbj|BAA29273.1| (AP000001) 289aa
long hypothetical maltose transport system permease
protein [Pyrococcus horikoshii]
Length = 289
Score = 96.7 bits (237), Expect = 4e-19
Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 23/219 (10%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
N+LI+AL L + V + YA SR+ F GR+ ++ ++ G I G+ LY I
Sbjct: 82 NTLIVALGVSGLVTIISVMSGYALSRMDFKGRKLMITSLMLLHAFPGVALIVGVYLLYRI 141
Query: 264 MVKLGLFNKLPALALVY-----AAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQII 318
G + + + +Y AA VP + WL+K + D+I +F+ + +IDGA+ + +
Sbjct: 142 SFP-GEQSLVRLYSFIYVIFARAALEVPMSVWLMKGFFDNIPWEFEWSGIIDGASRITVW 200
Query: 319 RYVLLPMALPGIATVAVMSFIGGWTEFI-LASLLLEQANQPLSVWIYTLMGGIGRGIDWN 377
R ++LP+ PGI VA+ SF+ GW + I + + L++Q TL I I+
Sbjct: 201 RKIMLPLIKPGILAVALFSFLAGWQDIIYVRTFLIDQ----------TLATFIEANIEAE 250
Query: 378 Y-----FAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
Y AAA L+ LP + F+ AQ+ + G + GG+K
Sbjct: 251 YTHMPMIAAAGTLYLLPTIIFFLTAQQLLLRGYS-GGIK 288
>emb|CAB56685.1| (AL121596) putative binding-protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 275
Score = 96.7 bits (237), Expect = 4e-19
Identities = 62/215 (28%), Positives = 114/215 (52%), Gaps = 17/215 (7%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGR-----EHVLYFYLMFTQVAGGLGIAGLI 258
NS ++ + ++ LTLL +PA++A +R GR E V + A L
Sbjct: 70 NSALVTVFSLALTLLLAIPASFALARST--GRLAGVVEKVFSLGFLIPT------FAALF 121
Query: 259 ALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQII 318
+ + GLF+ + L A ++P + +L ++ +I P+ +EAA +DGA+ ++
Sbjct: 122 PTFLLAAATGLFHTRIFMVLFLPATALPLSVVILVQFMRTIPPEMEEAARLDGASTFAVL 181
Query: 319 RYVLLPMALPGIATVAVMSFIGGWTEFILASLLL--EQANQPLSVWIYTLMGGIGRGIDW 376
R+V PM LPGIATV +++F+ W E++ + +++ + A + + V + TL G D+
Sbjct: 182 RHVYTPMCLPGIATVLLLNFLTFWNEYLYSLVIIGPDPAQRTVQVALPTLKS--ITGTDY 239
Query: 377 NYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A T+L +PV++++ L QK ++ L G +K
Sbjct: 240 GVLTAGTVLTLVPVWLVYTLLQKRMQQALVSGAVK 274
>pir||S75972 hypothetical protein - Synechocystis sp. (strain PCC 6803)
>gi|1001332|dbj|BAA10819.1| (D64006) membrane bound
sugar transport protein [Synechocystis sp.]
Length = 298
Score = 96.3 bits (236), Expect = 6e-19
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NSL +A+ + + AAYAF+ + F GR+ L F L+ + L LI + +
Sbjct: 93 NSLTIAVPATVIPIAIATFAAYAFAWMTFPGRQ--LLFILVVCLLVVPLQTT-LIPVLRV 149
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
+LGL + L + A +P +LL++YI ++ D EAA +DGA++L+I +++
Sbjct: 150 YAQLGLAGTFLGVWLAHTAYGLPLGIYLLRNYIGALPKDLIEAAAVDGASHLKIFTKLIV 209
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLLEQANQ--PLSVWIYTLMGGIGRGIDWNYFAA 381
P+++P IA+ AV F+ W + ++A + L P+++ + L+G RG DW A
Sbjct: 210 PLSMPAIASFAVFQFLWVWNDLLVALVYLGGTADVAPVTIQLSNLVG--SRGQDWYLLTA 267
Query: 382 ATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ + ++F Q+Y G+ G +K
Sbjct: 268 GAFISMIVPLMVFFGLQRYFVRGILAGSVK 297
>emb|CAB42552.1| (Y16753) sugar permease [Thermus thermophilus]
Length = 169
Score = 96.3 bits (236), Expect = 6e-19
Identities = 58/176 (32%), Positives = 86/176 (47%), Gaps = 16/176 (9%)
Query: 237 HVLYFYLMFTQVAGGLGI-AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSY 295
+++Y Y+ V LG+ L+ YG L Y A VP + W+L+ +
Sbjct: 8 YIMYIYVQ-NWVRSALGLEVRLVGSYG------------GLVFTYTAFFVPLSIWILRGF 54
Query: 296 IDSINPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQA 355
SI + +EAA++DGAT Q V+LP+ALPG+A AV F+ W E + A +L +A
Sbjct: 55 FASIPKELEEAAMVDGATPFQAFHRVILPLALPGLAATAVYIFLTAWDELLFAQVLTTEA 114
Query: 356 NQPLSVWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ V I +G D AA + LPV V+F Q+ + GLT G +K
Sbjct: 115 TATVPVGIRNFVGNYQNRYD--LVMAAATVATLPVLVLFFFVQRQLIQGLTAGAVK 168
>pir||T03551 transmembrane maltose transport protein - Rhodobacter capsulatus
>gi|3128352|gb|AAC16204.1| (AF010496) transmembrane
maltose transport protein [Rhodobacter capsulatus]
Length = 276
Score = 95.6 bits (234), Expect = 1e-18
Identities = 64/216 (29%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 196 SVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIA 255
S +F H NS++++L + L LL +PAA+A + + + +L +++ T++ +G+
Sbjct: 66 SNYFLHFWNSVVISLGSTLLALLVAIPAAWAMAFVPGPKTKDLL-MWMLSTKMMPAVGV- 123
Query: 256 GLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
L+ +Y I LGL + L +V ++P W+L +Y I + EAA +DGAT
Sbjct: 124 -LVPIYLIFRDLGLLDSRIGLVVVLMLMNLPIVIWMLYTYFREIPGEILEAARMDGATLK 182
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID 375
+ +VL PMA+PGIA+ +++ I W E L PL+ +I G+
Sbjct: 183 DELIHVLTPMAVPGIASTLLLNVILAWNEAFWTLQLTTSKAAPLTTFIAGYSS--PEGLF 240
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ +AA+ L P+ ++ +QK + GLT G +K
Sbjct: 241 YAKLSAASTLAIAPILILGWFSQKQLVRGLTFGAVK 276
>pir||F70703 probable uspE protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1524283|emb|CAB02073.1| (Z79702) uspE [Mycobacterium
tuberculosis]
Length = 274
Score = 95.2 bits (233), Expect = 1e-18
Identities = 63/210 (30%), Positives = 113/210 (53%), Gaps = 8/210 (3%)
Query: 205 SLILALLTVTLTL---LFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
+++ AL+T + L F V AAYAF+RL+F GR+ + + Y+ V G + + + LY
Sbjct: 70 AVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTV---VPLY 126
Query: 262 GIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYV 321
+M +LGL N AL L + GS P+ +LL+ + I D AA +DGA L +I +V
Sbjct: 127 LMMAQLGLRNTFWALVLPFMFGS-PYAIFLLREHFRLIPDDLINAARLDGANTLDVIVHV 185
Query: 322 LLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAA 381
++P + P +A +A+++ + W F + L++ ++ + + T W A
Sbjct: 186 VIPSSRPVLAALAMITVVSQWNNF-MWPLVITSGHKWRVLTVATADLQSRFNDQWTLVMA 244
Query: 382 ATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AT + +P+ +F+ Q++I + + + GLK
Sbjct: 245 ATTVAIVPLIALFVTFQRHIVASIVVSGLK 274
>pir||F72379 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4980936|gb|AAD35515.1|AE001721_14
(AE001721) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 271
Score = 95.2 bits (233), Expect = 1e-18
Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 201 HLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIAL 260
+L+N+L +A + +T+L V Y ++ KF+G V + M V+ + ++ L
Sbjct: 65 YLRNTLFVATVATVITVLVSVMTGYGLAKGKFWGIRPVNSMFTMTMFVSAQVI---MVPL 121
Query: 261 YGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRY 320
+ ++ LGL N L L+ A P ++ Y+ I + E+A IDGA QI
Sbjct: 122 FVVIRSLGLINSL--WGLIIPAVYTPTGMFMAVQYMKDIPDELLESAKIDGANEWQIFWR 179
Query: 321 VLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDWNYF 379
++ P++ P +A +A+ SF W +F+L L++ + N L + + T+ G G +WN
Sbjct: 180 IVFPLSKPLVAALAIFSFTWRWNDFVLPLLVVNRRNLYTLQLALATIQEEYG-GAEWNTI 238
Query: 380 AAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A + L +P ++F+L Q+ G+ GGLK
Sbjct: 239 LAFSTLTIIPTLIIFLLFQRLFMKGIMAGGLK 270
>pir||B83353 probable binding-protein-dependent maltose/mannitol transport
protein PA2340 [imported] - Pseudomonas aeruginosa
(strain PAO1) >gi|9948376|gb|AAG05728.1|AE004660_4
(AE004660) probable binding-protein-dependent
maltose/mannitol transport protein [Pseudomonas
aeruginosa]
Length = 277
Score = 94.8 bits (232), Expect = 2e-18
Identities = 65/218 (29%), Positives = 110/218 (49%), Gaps = 9/218 (4%)
Query: 196 SVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHV--LYFYLMFTQVAGGLG 253
S +F + NSL+++ L +L VPAAY+ + FF H +++ T++ +G
Sbjct: 67 SDYFAYAWNSLLISSSATLLCMLVAVPAAYSMA---FFETRHTKRTLLWMLSTKMLPPVG 123
Query: 254 IAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGAT 313
+ L+ +Y + + GL + AL +VY ++P W++ +Y I D EAA +DGA
Sbjct: 124 V--LMPIYLLAKQFGLLDSRLALIIVYTLINLPIVVWMVYTYFKDIPVDILEAARLDGAG 181
Query: 314 YLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRG 373
Q I VLLP+A G+A+ ++S I W E + L A PL+ + + G
Sbjct: 182 TWQEIVRVLLPIARGGLASTLLLSLILCWNEAFWSLNLTSSAAAPLTALVASYSS--PEG 239
Query: 374 IDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ W +A + L P+ V ++QK + GL+ G +K
Sbjct: 240 LFWAKLSAVSTLACAPILVFGWISQKQLVRGLSFGAVK 277
>gb|AAC45768.1| (AF018073) sorbitol/mannitol transport inner membrane protein; SmoG
[Rhodobacter sphaeroides]
Length = 276
Score = 94.8 bits (232), Expect = 2e-18
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 5/216 (2%)
Query: 196 SVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIA 255
S + H NS++++L + + L +PAA+A + + + VL +++ T++ +G+
Sbjct: 66 SNYARHFMNSVVISLGSTLVALAIAIPAAWAMAFVPGRRTKDVL-MWMLSTKMMPAVGV- 123
Query: 256 GLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
LI LY I GL + L +V ++P W+L +Y I + EAA +DGAT
Sbjct: 124 -LIPLYLIFRDTGLLDTRIGLVIVLTLINLPIVVWMLYTYFKEIPGEILEAARMDGATLG 182
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID 375
I Y+L PMA+PGIA+ +++ I W E L PL+ +I + G+
Sbjct: 183 SEILYILTPMAVPGIASTLLLNVILAWNEAFWTLQLTTSRAAPLTQFIASYSS--PEGLF 240
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ +AA+ + P+ ++ +QK + GLT G +K
Sbjct: 241 YAKLSAASTMAIAPILILGWFSQKQLVRGLTFGAVK 276
>pir||T30267 suger transport protein - Streptomyces lividans
>gi|3342712|gb|AAC46449.1| (U22894) integral membrane
protein [Streptomyces lividans]
>gi|7649656|emb|CAB88988.1| (AL353864) putative membrane
transport protein. [Streptomyces coelicolor A3(2)]
Length = 291
Score = 94.4 bits (231), Expect = 2e-18
Identities = 67/213 (31%), Positives = 114/213 (53%), Gaps = 9/213 (4%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLK-FFGREHVLYFYLMFTQVAGGLGIAGLIAL 260
L N+L A + L+F V AAY+ S+L+ FG+ + A L + + +
Sbjct: 84 LGNTLFYAFGALAFQLVFDVAAAYSLSKLRPVFGKAILGLMLATLMIPATVLVVPQYLTV 143
Query: 261 YGIMV-KLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIR 319
+ + + L N A+ L + FN +LLK + DSI + +AA +DGA+ ++ +R
Sbjct: 144 LDVPIFERNLLNTPWAIWLPSVTNA--FNIFLLKRFFDSIPRELLDAASMDGASPMRTLR 201
Query: 320 YVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGIDWNY 378
++LP++ P + V++ + +G W +F+ L L + + Q L+V IY+L G+ N
Sbjct: 202 SIVLPISRPILGVVSIFAIVGVWKDFLWPMLTLPDPSKQTLNVGIYSL----SNGVPVNV 257
Query: 379 FAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA + +LP V+F++ Q+ I SGLT GGLK
Sbjct: 258 LIAALTMASLPTLVIFLIFQRNIMSGLTAGGLK 290
>emb|CAB07809.1| (Z93773) permease [Thermus sp. T2]
Length = 274
Score = 94.0 bits (230), Expect = 3e-18
Identities = 64/212 (30%), Positives = 111/212 (52%), Gaps = 6/212 (2%)
Query: 201 HLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIAL 260
+L NS I+ L ++ LL + AAYA R +F + +L F V + ++ +
Sbjct: 67 YLLNSFIITLPSLVGVLLLLSMAAYALVRFRFRWAFPLYLLFLAFNMVPFQML---MLPV 123
Query: 261 YGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRY 320
+ + +LG+++ A L + A + F T++L+++ +I P E+A+IDGA + R
Sbjct: 124 FRLSNQLGVYDTYWAPILFHTAFQLGFATFVLRNFARTIPPSLFESAVIDGAGEWTLFRR 183
Query: 321 VLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDWNYF 379
+ P+ LPGIA VA + F + +F+ A +LL + +P++ + L G DW
Sbjct: 184 IAWPLMLPGIAAVATLEFTWIFNDFLWALVLLGRDELKPITTGLANLRGQY--ITDWPLI 241
Query: 380 AAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA+L+ +P ++F Q+Y GLTLG K
Sbjct: 242 VAASLMATVPTLLVFFGLQRYFIQGLTLGATK 273
>pir||T36900 probable integral membrane transport protein - Streptomyces
coelicolor >gi|5419995|emb|CAB46387.1| (AL096743)
putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 298
Score = 94.0 bits (230), Expect = 3e-18
Identities = 58/215 (26%), Positives = 105/215 (47%), Gaps = 6/215 (2%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F + NS+ + L T+ +T L + YA +R F + + L V G L L
Sbjct: 88 FGTYFTNSVYVGLATLVMTTLVALAGGYALARFDFRIKRGFMLALLCSQFVPGALL---L 144
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
+ L+ I L + N L ++ + +P + L+ ++I ++ +EAA +DG +
Sbjct: 145 VPLFEIFAGLQMINSLGSVIIAETVFQLPLSIILISNFIKNVPYSLEEAAWVDGCGRFRA 204
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGIDW 376
R V+LP+ PG+ V +F+ W F+ A + L Q+ Q + V + +LM +D
Sbjct: 205 FRIVVLPLLRPGLIAVGSFAFVHSWNHFLFALMFLNNQSKQTIPVGLNSLMS--ADSVDL 262
Query: 377 NYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA ++ A+PV ++F QK++ +G + G +K
Sbjct: 263 GALAAGGIVAAVPVVIVFAFIQKWLITGFSAGAVK 297
>pir||T36914 probable integral membrane sugar transport protein - Streptomyces
coelicolor >gi|5420009|emb|CAB46401.1| (AL096743)
putative integral membrane sugar transport protein
[Streptomyces coelicolor A3(2)]
Length = 292
Score = 94.0 bits (230), Expect = 3e-18
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 5/210 (2%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
L NS + ++ + L+ +PAAYA S VL+F+L + +AGL+ +Y
Sbjct: 88 LVNSAVASIASTLFVLVLALPAAYALSIRPVKKWTDVLFFFLSTKMLPV---VAGLLPIY 144
Query: 262 GIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYV 321
+ + + L ++Y + ++P W+++S++ + EAA +DGA I+ V
Sbjct: 145 LFAKNTDMLDNIWLLVILYTSMNLPIAVWMMQSFLAEVPVAIIEAARVDGAKLPTILVRV 204
Query: 322 LLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAA 381
+ P+ALPGIA +++ FI W E + A +L + V++ + +G+ A
Sbjct: 205 VAPIALPGIAATSLICFIFSWNELLFARVLTGVVAETAPVFLTGFI--TSQGLFLAKVCA 262
Query: 382 ATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A+L+ +LPV AQ + GL+LG +K
Sbjct: 263 ASLVISLPVLAAGFAAQDKLVQGLSLGAVK 292
>emb|CAC16437.1| (AL450165) putative sugar transport integral membrane protein
[Streptomyces coelicolor]
Length = 307
Score = 94.0 bits (230), Expect = 3e-18
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 8/209 (3%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NSLI+A + T+LF A +AF++L+F GR +L + V L + + L+ +
Sbjct: 105 NSLIVAGVIALSTVLFATLAGFAFAKLRFKGRNALLMLVIGTMMVPPQLAV---VPLFMM 161
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPD-FDEAALIDGATYLQIIRYVL 322
M LG +LPA+ +V + ++ Y+ PD EA +DGA L+I ++
Sbjct: 162 MADLGWSQQLPAVIFPTLVSAV--GVFFMRQYLTEALPDELVEAGRVDGAHSLRIFFSIV 219
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAA 382
LP+A P +A + +++F+ W +F ++L+ N + V + L G R D + A
Sbjct: 220 LPIARPAMAVLFMITFVHAWNDFFWPFVVLDMTNPTVPVALTQLSAGYVR--DQSLIMAG 277
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
LL LP+ MF++ + I SG+ G +K
Sbjct: 278 ALLGTLPLLAMFVVFGRQIVSGIMAGAVK 306
>gb|AAK41272.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 267
Score = 93.2 bits (228), Expect = 5e-18
Identities = 67/217 (30%), Positives = 105/217 (47%), Gaps = 10/217 (4%)
Query: 196 SVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIA 255
+ F SL A L +T+ +PA Y SRL + + L+ T + + I
Sbjct: 59 TAFIDPFIKSLETATLVGIITIALAIPAGYGLSRLPR-AIAYSIIILLLVTNMMPAIVIG 117
Query: 256 GLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
IA+ +KL LF + LAL ++P T++L+ SI D + A +DGA
Sbjct: 118 IPIAVD--FLKLHLFESVVGLALAQTLITLPLATFILQGTFSSIPIDLEHQARVDGANLF 175
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLE-QANQPLSVWIYTLMGGIGRGI 374
+ VLLP+A PGIA ++S++ W EF A LL+ + P++++ G + GI
Sbjct: 176 NRLFSVLLPLAAPGIAAAFLISWMFSWDEFTYAILLIPYHSTLPVTIYQDVTRGNLLAGI 235
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A +L+F LPV ++ QKY+R GG+K
Sbjct: 236 ------AFSLIFTLPVIILTFALQKYLRGEYLAGGIK 266
>emb|CAB71198.1| (AL138538) putative sugar transport inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 303
Score = 92.8 bits (227), Expect = 6e-18
Identities = 71/215 (33%), Positives = 107/215 (49%), Gaps = 15/215 (6%)
Query: 203 KNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYG 262
KN+L+ A L LT+ VP AYA ++ +F GR L + + + I I +Y
Sbjct: 97 KNTLLYAGLGTVLTVASSVPVAYALAKFRFRGRHLSLMLVISMMMLPPQVII---IPMYL 153
Query: 263 IMVK-LGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYV 321
K L L L L + A G F+ +LL+ ++ +I ++ +AA +DG L+ + V
Sbjct: 154 FWAKQLDLSGTLWPLIVPMAFGDA-FSIFLLRQFLLTIPDEYLDAAKVDGCGELRTLLRV 212
Query: 322 LLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGI-----GRGIDW 376
+LPMA PGIA VA+ F W ++ + A++ W TL G+ DW
Sbjct: 213 VLPMAKPGIAAVALFQFFYAWNDYFGPQI---YASENPGAW--TLSYGLESFKGAHHTDW 267
Query: 377 NYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
N AAT+L PV ++F AQK G+TL G+K
Sbjct: 268 NLTMAATVLVMAPVILVFFFAQKAFVEGVTLTGVK 302
>dbj|BAB07407.1| (AP001519) sugar transport system (permease) [Bacillus halodurans]
Length = 273
Score = 92.8 bits (227), Expect = 6e-18
Identities = 63/220 (28%), Positives = 111/220 (49%), Gaps = 16/220 (7%)
Query: 197 VFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAG 256
+F L NS+I+A++ L LLF A YA +RL F GR+ + L + G +
Sbjct: 65 LFVRWLMNSVIIAVVGTALNLLFNSMAGYALARLSFRGRKSMFILVLAVLMIPGQVT--- 121
Query: 257 LIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
+I Y I+ +LG N + +V A + F ++++ + + + +EAA +DG + +
Sbjct: 122 MIPNYLILRELGWLNSYEGM-IVPAMVNATF-IFMMRQFFVNFPKEVEEAAAMDGLSQMG 179
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIG----- 371
++LPMA P +A A+ F+ W +F+ +++ A+ +YTL G+
Sbjct: 180 TFFRIVLPMAKPALAAQAIFVFMALWNDFMRPLIVMSDAS------MYTLPVGLNSFQSD 233
Query: 372 RGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
WNY AA+++F LPV V++ ++ GL+ G K
Sbjct: 234 NVTFWNYVMAASMIFTLPVLVIYAFFSRFFIDGLSFRGDK 273
>gb|AAC04470.1| (AF007800) MtlG [Pseudomonas fluorescens]
Length = 276
Score = 92.4 bits (226), Expect = 8e-18
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 9/218 (4%)
Query: 196 SVFFHHLKNSLILALLTVTLTLLFVVPAAY--AFSRLKFFGREHVLYFYLMFTQVAGGLG 253
S +F + NS++++ L LL VPAAY AF K R +++ T++ +G
Sbjct: 66 SNYFSYAWNSVLISFSATALCLLISVPAAYSMAFYETK---RTKSTLLWMLSTKMLPPVG 122
Query: 254 IAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGAT 313
+ L+ +Y + GL + AL ++Y ++P W++ +Y I D EAA +DGAT
Sbjct: 123 V--LMPIYLLAKSFGLLDTRIALIIIYTLINLPIVVWMVYTYFKDIPKDILEAARLDGAT 180
Query: 314 YLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRG 373
Q + VLLP+A G+A+ ++S I W E + L PL+ I + G
Sbjct: 181 LWQEMVRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSNAAPLTALIASYSS--PEG 238
Query: 374 IDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ W +A + L P+ + ++QK + GL+ G +K
Sbjct: 239 LFWAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK 276
>pir||C72756 probable multiple sugar-binding transport system permease protein
APE0040 - Aeropyrum pernix (strain K1)
>gi|5103428|dbj|BAA78949.1| (AP000058) 302aa long
hypothetical multiple sugar-binding transport system
permease protein [Aeropyrum pernix]
Length = 302
Score = 92.1 bits (225), Expect = 1e-17
Identities = 57/203 (28%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NSLI+AL + + AAY FSR F + ++ ++ + + + + L+ +
Sbjct: 98 NSLIVALPATVIPVAAASFAAYGFSRFSFPLKSYLFLVTILLMALPQQIVV---VPLFLL 154
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
+ LGL N P + LV++A + + + +K++ D + + +EAA +DGA+ +I ++L
Sbjct: 155 LKNLGLINTFPGIILVHSAWGMAWIIFFMKNFFDILPREVEEAARVDGASDFRIFYKIVL 214
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRG---IDWNYFA 380
PM+LPGI + +V+ F W+ F + L ++ W+ T +G +DW A
Sbjct: 215 PMSLPGILSASVLQFTWVWSSFFFELIFLIDPSK----WVITQRIANMKGTYLVDWGLIA 270
Query: 381 AATLL-FALPVFVMFMLAQKYIR 402
A ++ A+P+ V +L + YIR
Sbjct: 271 AGSVFAMAVPLAVYMLLQRYYIR 293
>emb|CAB61806.1| (AL133236) putative sugar-permease [Streptomyces coelicolor A3(2)]
Length = 293
Score = 92.1 bits (225), Expect = 1e-17
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 10/222 (4%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLK--FFGREHVLYFYLMFTQVAG 250
F + +L NSL + L T ++ A Y SRL+ F G + F + V
Sbjct: 79 FSKTPVLDYLYNSLAVTLGTTVFAVVIGALAGYPMSRLRNRFIGGYTLSLFVVQSLPV-- 136
Query: 251 GLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALID 310
I +I L+ + K+G+ + L +A+++ AG + W++ +Y DSI + +EAA +D
Sbjct: 137 ---IVFVIPLFVVFAKIGMADTLSGVAVIFIAGGMAVTCWMMAAYYDSIPVELEEAAWVD 193
Query: 311 GATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGG 369
GA+ V+L + PGI + A+ SF+ W ++++A++ L Q+N L + + T
Sbjct: 194 GASLWGGFVRVVLRNSYPGILSAAIFSFLVAWNDYLVATVFLRSQSNFTLPIGLQTYFQ- 252
Query: 370 IGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
DW A +++ LP ++F + ++ G G +K
Sbjct: 253 -QNATDWGPVMAMSVVMLLPPVIVFAVLNRFFSIGGIGGAIK 293
>dbj|BAB04838.1| (AP001511) lactose transport system (permease) [Bacillus
halodurans]
Length = 281
Score = 92.1 bits (225), Expect = 1e-17
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F + F + KNS I+ V +L AY F+RL+F ++ + F + V +
Sbjct: 66 FGRTGFDIYFKNSFIITTSVVIGAILSSSIVAYGFARLQFKFKK--VLFACLIATVMLPV 123
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
I LI Y + LG N L + G PF +LL +I I + DEAA+IDG
Sbjct: 124 QIT-LIPQYILFHNLGWVNTFYPLIVPAFLGGTPFFIFLLIQFIRGIPRELDEAAIIDGC 182
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIG 371
+ + V+LP+ P + TVA+ +F+ W +F+ + L + + Q +++ + M
Sbjct: 183 STFGVFWRVILPLLKPALVTVAIFAFMWTWDDFLAPLIYLNKTDIQTVALGLRNFMDA-E 241
Query: 372 RGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
G W A + L LP F++F+ Q+Y+ G++ GLK
Sbjct: 242 SGTSWGALLAMSTLSLLPQFIIFLFFQRYLVEGISTTGLK 281
>emb|CAB87330.1| (AL163672) putative integral membrane transport protein
[Streptomyces coelicolor A3(2)]
Length = 305
Score = 90.9 bits (222), Expect = 2e-17
Identities = 62/209 (29%), Positives = 109/209 (51%), Gaps = 14/209 (6%)
Query: 209 ALLTVTLTLLFVVPAA---YAFSRLKFFGREHVLYFYLMFTQVAGGLGI---AGLIALYG 262
AL+TV T+L VV A YAF+ ++F GR+ F V G L + LI +
Sbjct: 105 ALITVPATVLVVVIGALAGYAFAWMEFPGRD------WWFLAVVGLLVVPVQVALIPIAE 158
Query: 263 IMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVL 322
+ K+GLF + + L + +PF +LL+++ I + EAA +DGA L++ V+
Sbjct: 159 LFGKIGLFGSMLGVILFHVGFGLPFAVFLLRNFFAEIPRELLEAARLDGAGELRLFVRVV 218
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAA 382
+P+ P IA++ + F+ W + ++A + + NQP++V + T + G ID A
Sbjct: 219 MPLGGPAIASLGIFQFLWVWNDMLVALIFSDSGNQPITVALQTQVRQFGNNID-VLAPGA 277
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ +P+ V F ++++ SG+ G +K
Sbjct: 278 FISMVIPLAVFFAFQRQFV-SGVMAGAVK 305
>pir||E72331 hypothetical protein TM0812 - Thermotoga maritima (strain MSB8)
>gi|4981342|gb|AAD35894.1|AE001748_10 (AE001748) sugar
ABC transporter, permease protein, putative [Thermotoga
maritima]
Length = 271
Score = 89.7 bits (219), Expect = 6e-17
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 9/209 (4%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
N++I+A L +LF + AY +R+ F G++ VL+ L+ + LI Y
Sbjct: 70 NTIIIAGFGTLLNVLFSLMVAYPLARIDFKGKQLVLFLILLPMMIPVQ---NTLIVNYLT 126
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
+ KLGL N + L A F ++++ SI F++AA IDGA L I ++
Sbjct: 127 LRKLGLLNTYTGVILPQAV--TIFGIFMMRQAYLSIPKSFEDAARIDGAGELYIWWKIIT 184
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGIDWNYFAAA 382
P+ P IAT+ V I W F+ ++L +N+ PLSV + L +++ Y AA
Sbjct: 185 PLIKPDIATLVVFQVITWWDNFLWPLIVLSDSNKYPLSVALVYLNSTF--QVNFRYTAAG 242
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+L LPV ++F+ AQ+YI + + GG+K
Sbjct: 243 IVLAILPVVLLFIFAQRYIINAIA-GGVK 270
>gb|AAK41417.1| Sugar ABC transporter [Sulfolobus solfataricus]
Length = 296
Score = 89.3 bits (218), Expect = 7e-17
Identities = 63/216 (29%), Positives = 113/216 (52%), Gaps = 9/216 (4%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
++NSLILA T +++L + YA SRL ++ + F + T A + LY
Sbjct: 85 IRNSLILAGSTAIISVLLALITGYALSRLNVPAKKILATFIYIVTFFPY---TASAVPLY 141
Query: 262 GIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYV 321
+ K L N + L L Y G+ F ++ K IDSI P ++E A+IDG + +
Sbjct: 142 LLFAKFHLLNYI-GLILAYTPGTSIFAAFIAKLSIDSIPPSYEEIAMIDGLSRFGAFLRI 200
Query: 322 LLPMALPGIATVAVMSFIGGWTEFILA-SLLLEQANQ-PLSVWIYTLMGGIGRGI--DWN 377
++ +ALP +A A++ F G + +F LA S LL + ++ +Y + G + + +N
Sbjct: 201 VMRLALPVVALTALLGFSGTYLDFALAYSFLLPNVKEWTATIGLYYMAGLLNQASAPAYN 260
Query: 378 YFAAATLLFALPVFVMFMLAQKYI-RSGLTLGGLKE 412
FAA ++ +P+ +F+++Q+ + R+ L G+K+
Sbjct: 261 IFAAGAVIMGIPLMALFIVSQRMMTRAYSNLAGVKQ 296
>pir||E70693 probable ugpE protein - Mycobacterium tuberculosis (strain H37RV)
>gi|1648886|emb|CAB03652.1| (Z81331) ugpE [Mycobacterium
tuberculosis]
Length = 275
Score = 88.9 bits (217), Expect = 9e-17
Identities = 61/215 (28%), Positives = 110/215 (50%), Gaps = 7/215 (3%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F+ L+NSLI+ + + V +A+ ++F GR V + V + +
Sbjct: 66 FWTFLRNSLIITSVLAVVKFTLGVLSAFGLVFVRFPGRTAVFLVIIAALMVPNQITV--- 122
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
I+ Y ++ LGL N + L A V F T+L++++ S+ + EAA +DGA + Q+
Sbjct: 123 ISNYALISHLGLRNTFAGIILPLAG--VAFGTFLMRNHFLSLPAEIIEAARMDGARWWQL 180
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGIDW 376
+ V+LPM+ P + V V++ + W E++ L+ +++ PL + + L G +W
Sbjct: 181 LLRVVLPMSRPTMVAVGVITVVNEWNEYLWPFLMSDDESVAPLPIGLTFLQQAEG-VTNW 239
Query: 377 NYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A TLL LP+ ++F+ Q+ + GLT G +K
Sbjct: 240 GPVMAVTLLAMLPILLVFIALQRQMIKGLTSGAVK 274
>emb|CAC11827.1| (AL445065) probable sugar ABC transporter, permease protein
[Thermoplasma acidophilum]
Length = 291
Score = 88.9 bits (217), Expect = 9e-17
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NS+ +++ V ++ + A YAF+RLKF GR+++ Y L + + IA Y
Sbjct: 88 NSVFVSICVVAGSVFVGMLAGYAFARLKFPGRDYMFYAVLATLMIPFPVIS---IASYVF 144
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
M+ L + L L A ++ + ++++ Y +I + + AA IDG QI V
Sbjct: 145 MLDLNWLSTYQGLILPQIASAL--DVFIMRQYFLTIPEEVELAAKIDGMKPWQIFFRVSA 202
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGIDWNYFAAA 382
PMA P IA + SFIG W F+ + + N L + + G G I WN
Sbjct: 203 PMAKPAIAAATIFSFIGSWNNFLWPLMEVHSLNMFTLPLVLNFFKGANGTQIYWNQMMTV 262
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTL 407
+L +P V+F++ +KY SG+++
Sbjct: 263 NILTMIPTIVIFVVFEKYFISGISM 287
>emb|CAB55716.1| (AL117387) putative binding-protein-dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 280
Score = 87.8 bits (214), Expect = 2e-16
Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 24/241 (9%)
Query: 183 GEAKLTNLGKFVNSVFFHHLKN---SLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVL 239
G A L N+ F LK ++ L L L + PAAY +R +L
Sbjct: 51 GTATFQYLADAWNNPDFSILKGYGVTIALVLCVNALAMAVCAPAAYVLARTPKPISRLLL 110
Query: 240 YFYL--MF--TQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSY 295
+F++ MF TQV L+ + ++ +GL LP L L A ++PF ++ Y
Sbjct: 111 FFFIAGMFIPTQVI-------LVPVIFVLRGIGLMGTLPGLILFMTATTIPFTLFVFFGY 163
Query: 296 IDSINPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQA 355
I + DEAA IDGA + + ++LP+ P +ATV +++ + W +F ++L
Sbjct: 164 IRVLPRSLDEAAAIDGAGRYRTLWRIILPLMRPIVATVFILNSLSVWNDFASPQMILGPG 223
Query: 356 NQPLSVWIYTLMGGIGRGI-----DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGL 410
+ +YT+ G+ + D+ LL +P+ V+F++ Q++I SGL G +
Sbjct: 224 S-----GVYTVTTGVYAAVGQYSTDYTKVFPTLLLAVIPILVIFVVMQRHIMSGLAAGAV 278
Query: 411 K 411
K
Sbjct: 279 K 279
>dbj|BAB07401.1| (AP001519) sugar ABC transporter (permease) [Bacillus halodurans]
Length = 293
Score = 87.4 bits (213), Expect = 3e-16
Identities = 56/212 (26%), Positives = 106/212 (49%), Gaps = 12/212 (5%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGI---AGLIAL 260
NS+I+ V LT+L +A +R+++ + VL +++ GL I + LI L
Sbjct: 89 NSVIVTGSAVILTVLLASFVTFALTRMRWKLSKLVLGLFMV------GLMIPVHSTLIPL 142
Query: 261 YGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRY 320
+ + +GL + A+ L Y A ++P +L + ++ + +EAA++DG + ++
Sbjct: 143 FNFFLNVGLMDHPLAIILTYTAFNLPLTIMILLGFYYTLPRELEEAAIMDGCSIHRLFFQ 202
Query: 321 VLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDWNYF 379
++LPM P +AT A+++ I W EF+ + + + L+V I +G DW
Sbjct: 203 IILPMTAPVVATTAIINMIYNWNEFVFVNTFISSDKYKTLTVGIQNFIGQY--STDWGAI 260
Query: 380 AAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A ++ LP+ + F+ I G+T G +K
Sbjct: 261 GATLVISILPILLAFIFLSNRIVEGITAGSVK 292
>pir||H72450 probable maltose transport system permease protein APE2252 -
Aeropyrum pernix (strain K1) >gi|5105953|dbj|BAA81264.1|
(AP000064) 303aa long hypothetical maltose transport
system permease protein [Aeropyrum pernix]
Length = 303
Score = 86.6 bits (211), Expect = 5e-16
Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 211 LTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGIMVK-LGL 269
LT TL L AAY+ SR++F GR +M G I G+ ++ I+ LG+
Sbjct: 101 LTATLVSLL---AAYSISRMEFKGRGVFTAGLIMLHAFPGVALIIGVYMIFRIIGDVLGV 157
Query: 270 ----FNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLLPM 325
F + + L AA VP WL K + D I + + +AL+DGA+ +++ +L+P+
Sbjct: 158 LGEEFYAIAYIILARAALEVPMAIWLFKGFFDKIPWELEWSALVDGASRVRVWWSILVPL 217
Query: 326 ALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDWNYFAAATL 384
PGIA V + +F+ GW EFI + L+ L +I ++ AAA
Sbjct: 218 VKPGIAAVLIFTFLAGWEEFIYFYVFLKPFGIDSLPTFIEEIVAA-AENYQLTIIAAAGT 276
Query: 385 LFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ LP V F+L Q+ + + GGLK
Sbjct: 277 FYLLPTIVFFVLTQRLLLEAYS-GGLK 302
>emb|CAC10106.1| (AL442165) putative cellobiose transport permease [Streptomyces
coelicolor]
Length = 303
Score = 85.8 bits (209), Expect = 8e-16
Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 12/213 (5%)
Query: 202 LKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY 261
L +++ + T+ L V A +AF++L+F GR ++ + V L I I LY
Sbjct: 99 LNTTIVAGISACTIVFLSTV-AGFAFAKLRFRGRNALMLIVVGTMMVPPQLSI---IPLY 154
Query: 262 GIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPD-FDEAALIDGATYLQIIRY 320
++ KL ++L A+ L + F + ++ Y+ PD EAA +DGA+ +++ +
Sbjct: 155 MMVAKLDWSDQLQAVILPSLVNA--FGVFFMRQYLLQALPDEIIEAARVDGASSWRVMWH 212
Query: 321 VLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGI--DWNY 378
V+ P A P +A + ++ F+ W +F+ L+L Q P + + G+GRG D +
Sbjct: 213 VVFPAARPAMAVLGMLMFVQSWNDFLWPFLVLTQNGSPT---VQVALAGLGRGYTPDQSL 269
Query: 379 FAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A LL LP+ ++F + K I G+ G +K
Sbjct: 270 IMAGALLGTLPLLLVFAIFGKQIVGGIMQGAVK 302
>pir||D71123 probable sugar transport system permease protein - Pyrococcus
horikoshii >gi|3257163|dbj|BAA29846.1| (AP000003) 279aa
long hypothetical sugar transport system permease
protein [Pyrococcus horikoshii]
Length = 279
Score = 85.4 bits (208), Expect = 1e-15
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 17/221 (7%)
Query: 197 VFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAG 256
+F + N+ + A +TVT ++F A YAF+RLKF GR+ + L +
Sbjct: 69 LFPRWILNTSLYAGITVTGNIIFSSMAGYAFARLKFPGRDVIFSSLLSLLMIPM---FVT 125
Query: 257 LIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
L+ Y I+ KLGL + + L+L+ + +L++ Y S+ + EAA +DG ++
Sbjct: 126 LVPNYIIIYKLGLVDNIFGLSLLSLVSVS--SIFLMRQYFTSLPNEIFEAARLDGCGPIK 183
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID- 375
Y+ LP+A P + VAV F+G W FI + L +TL G+
Sbjct: 184 SFFYIALPLAKPALGAVAVYQFLGAWNAFIGPLIFLRSPEN------FTLPVGLSFAFQR 237
Query: 376 --WNYFA---AATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W + A +++ A P ++F+ KY+ G+ + G K
Sbjct: 238 SMWTEYTPIIAGSIVAAAPTILLFVALNKYLIRGIVVTGGK 278
>emb|CAB70939.1| (AL137778) putative transport system inner membrane protein
[Streptomyces coelicolor A3(2)]
Length = 303
Score = 85.4 bits (208), Expect = 1e-15
Identities = 63/217 (29%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAG---LIAL 260
NSL LA+ +V ++ AYAF++++F GR L+FT + G L + LI
Sbjct: 98 NSLFLAVGSVIGIVVSCSLTAYAFAKIRFAGRN------LLFTLMIGTLLLPYHVLLIPQ 151
Query: 261 YGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRY 320
Y + L + N L L + F +L+ ++ ++ + DEAA +DG +L+I
Sbjct: 152 YVLFRNLDMINTYTPLLLGKYLATEAFFVFLMVQFMRNLPRELDEAARLDGCGHLRIYWS 211
Query: 321 VLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDW---- 376
++LP+ P + T A+ +FI W +F+ + L + + YT+ G+ +D
Sbjct: 212 IVLPLCRPALITSAIFTFINSWNDFMGPLIYLNEPGK------YTISLGLKMFVDQEGLA 265
Query: 377 NY--FAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
NY A +L+ LPV F+ Q+Y+ G+ GLK
Sbjct: 266 NYGGMIAMSLVALLPVLAFFLAFQRYLIDGMATSGLK 302
>pir||B72279 hypothetical protein TM1233 - Thermotoga maritima (strain MSB8)
>gi|4981787|gb|AAD36308.1|AE001779_10 (AE001779) sugar
ABC transporter, permease protein, putative [Thermotoga
maritima]
Length = 265
Score = 84.7 bits (206), Expect = 2e-15
Identities = 60/205 (29%), Positives = 105/205 (50%), Gaps = 10/205 (4%)
Query: 205 SLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGIM 264
S+ +AL+++ ++ L +PA YA +R F G+ + LM + + L+ LY
Sbjct: 68 SVQVALISIGISFLLGLPAGYALTRYVFPGKNIIRLSMLMTRSIPLIVVAVPLVVLY--- 124
Query: 265 VKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLLP 324
++ L + +AL +A+ +PF + S I+ +++EA ++ G + Q + LP
Sbjct: 125 MRFNLADTTLGVALAHASMILPFVVLITSSVFSGISVEYEEAGMVFGLSRFQAFIRITLP 184
Query: 325 MALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAATL 384
+ALPG+A A+ +FI W E + AS +L N+ L I + D+ FAA T+
Sbjct: 185 LALPGLAASAIFAFIMSWNE-VFASSILTLTNRTLPAHI---LNTAMASPDYFKFAAGTI 240
Query: 385 LFALPVFVMFMLAQKYIRS--GLTL 407
+ A+P V +KY+ S G+TL
Sbjct: 241 M-AVPAMVFIFFIRKYLVSMWGITL 264
>emb|CAA91218.1| (Z56279) integral membrane protein [Thermoanaerobacter brockii]
Length = 280
Score = 84.3 bits (205), Expect = 2e-15
Identities = 58/209 (27%), Positives = 99/209 (46%), Gaps = 3/209 (1%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NSLI+++ LT+ F + AYA F ++ + ++ T V L +I Y
Sbjct: 75 NSLIISVPVTFLTVYFSMMTAYAIHVYDFKWKKMLYNTVVLLTIVPTQL--VPIIGFYKY 132
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
M L L N L +V A S P + L+ +I D EAA I+G+ L I ++L
Sbjct: 133 MASLKLLNSYIPL-IVPAIASPPMVFFALQYLESTIVKDLIEAARIEGSGELGIFHKIIL 191
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAAT 383
P+A PG T+ ++SF+ W F +L+ + + I L+ G ++
Sbjct: 192 PIAKPGAFTMGILSFVASWNNFFTPFMLISKIEKYTLPMIVKLLRGDMYRTEYGAIYLGL 251
Query: 384 LLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
+ +P+ +++ + KYI SG+ +G +KE
Sbjct: 252 AITMIPIIIVYAIFSKYIVSGIAMGAIKE 280
>gb|AAF43782.1|AF135015_1 (AF135015) putative integral membrane protein [Thermoanaerobacter
ethanolicus]
Length = 280
Score = 84.3 bits (205), Expect = 2e-15
Identities = 58/210 (27%), Positives = 101/210 (47%), Gaps = 5/210 (2%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NSLI+++ LT+ F + AYA F ++ + ++ T V L +I Y
Sbjct: 75 NSLIISVPVTFLTVYFSMMTAYAIHVYDFKWKKMLYNTVVLLTIVPTQL--VPIIGFYKY 132
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDS-INPDFDEAALIDGATYLQIIRYVL 322
M L L N + L+ A + P +L Y++S I D EAA I+G+ L I ++
Sbjct: 133 MASLKLLNSY--IPLIVPAIASPPMVFLALQYLESTIVKDLIEAARIEGSGELGIFHKII 190
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAA 382
LP+A PG T+ ++SF+ W F +L+ + + I L+ G ++
Sbjct: 191 LPIAKPGAFTMGILSFVASWNNFFTPFMLISKIEKYTLPMIVKLLRGDMYRTEYGAIYLG 250
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
+ +P+ +++ + KYI SG+ +G +KE
Sbjct: 251 LAITMIPIIIVYAIFSKYIVSGIAMGAIKE 280
>dbj|BAB04622.1| (AP001510) L-arabinose transport system (permease) [Bacillus
halodurans]
Length = 279
Score = 83.9 bits (204), Expect = 3e-15
Identities = 55/209 (26%), Positives = 103/209 (48%), Gaps = 8/209 (3%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NS+ ++++ V L+LLF YA + F GR L+ + + ++ L+ +
Sbjct: 77 NSVWISIVIVVLSLLFSSMVGYALAVYDFKGRNFFFLLVLIILMIPFEIL---MLPLFQL 133
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
M+KL L N A+ L A P + + Y + + +AA IDG T I ++L
Sbjct: 134 MIKLQLVNTYTAVIL--PAIVAPIAVFFFRQYALGLPKELMDAARIDGCTEYGIFFKIML 191
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGIDWNYFAAA 382
P+ P +A +A++ + W F+ ++L + L + + TL+ G D A
Sbjct: 192 PLMGPSLAAMAILQGLNSWNNFLWPLVVLRSNDMFTLPIGLATLLTPYGNNYD--ILLAG 249
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+++ +P+ ++F+ Q+Y +GLT+GG+K
Sbjct: 250 SVMTIVPIVILFIFFQRYFIAGLTVGGVK 278
>emb|CAC11293.1| (AL445063) trehalose/maltose transporter, inner membrane protein
(MalG) related protein [Thermoplasma acidophilum]
Length = 247
Score = 83.5 bits (203), Expect = 4e-15
Identities = 53/216 (24%), Positives = 104/216 (47%), Gaps = 7/216 (3%)
Query: 195 NSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGI 254
+S+ SL A + ++ +L AAY SR+ + +++ L F+ + L I
Sbjct: 37 SSILIAAFYKSLETAFIVASIAILLGFHAAYGLSRIPY-KLSNLILGLLFFSTMIPSLTI 95
Query: 255 AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATY 314
A I + +K+GL++ LAL +P +L+ ++S+ + A +DGAT+
Sbjct: 96 A--IPISATFIKIGLYDSALGLALAQELVVLPLTVFLITGSLESVPRTLEYQARVDGATF 153
Query: 315 LQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGI 374
+Q + ++ P+A+PG+ ++S++ W EF A +++ + L + IY G
Sbjct: 154 IQALYRIIFPLAVPGVVAAFLLSWLMSWDEFTFA-VIISPVHPTLPILIYLESTARGDIF 212
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGL 410
FA LL +PV ++ ++ K++R G+
Sbjct: 213 TGTVFA---LLVTIPVIILTIILSKFLRGSYMSAGI 245
>emb|CAB11327.1| (Z98604) possible transport protein [Mycobacterium leprae]
Length = 283
Score = 82.7 bits (201), Expect = 7e-15
Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 7/211 (3%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F+ N+++ A + F A YAF+RL+F GR+ + YL + + I
Sbjct: 74 FWRMFFNTVLYAGYVTVGQVFFCSLAGYAFARLQFRGRDALFVLYLGTLMMPLTVTI--- 130
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
I + +M LG + A+ + GS F T+L++ + ++ D +EAA++DG + QI
Sbjct: 131 IPQFILMRVLGWTDTPWAMIVPGLFGSA-FGTYLMRQFFRTLPSDLEEAAILDGCSPWQI 189
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDW 376
VLLP A P + +AV++++ W +F+ L++++ + L++ + + G G W
Sbjct: 190 YWRVLLPHAKPAVGVLAVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRMRGEY--GTCW 247
Query: 377 NYFAAATLLFALPVFVMFMLAQKYIRSGLTL 407
A ++L LP+ +++ +AQ+ G+T+
Sbjct: 248 PVIMATSMLIILPLVIIYTIAQRAFVRGITV 278
>dbj|BAB04785.1| (AP001510) unknown conserved protein [Bacillus halodurans]
Length = 293
Score = 82.3 bits (200), Expect = 9e-15
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 22/233 (9%)
Query: 195 NSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSR--LKFFGREHVLYFYLMFTQVAGGL 252
N F S++ +L +++ ++ AAYA S+ F GR+ ++F+++ T + G
Sbjct: 68 NDNFIRSFLISVVRVVLGTVISMGAMLCAAYALSKEDRDFKGRKFYIWFFVI-TMLFNG- 125
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINP-DFDEAALIDG 311
GL+ Y ++ LGL N + AL L A + FN LL ++ + P +E+A IDG
Sbjct: 126 ---GLVPTYMVVTGLGLTNTIWALVLPPAINA--FNLILLLNFFRTAVPKSLEESAFIDG 180
Query: 312 ATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQA-NQPLSVWIYTLM--- 367
A + QI + LP+++P IATV++ + + W + + A N PL ++ T++
Sbjct: 181 ANHFQIFLKIYLPISVPAIATVSLFTMVFHWNSWFDGMIYNNDARNYPLQTFLQTIVVQQ 240
Query: 368 -------GGIGRGIDWNYFAAATL-LFALPVFVMFMLAQKYIRSGLTLGGLKE 412
R + AA + + ALP+ +++ QKY G+ LG KE
Sbjct: 241 DFSQITDAETLRNLSQRTVQAAQIFIAALPMLIVYPFIQKYFVKGIVLGAEKE 293
>pir||T37227 probable sugar transport system permease protein - Streptomyces
coelicolor >gi|3559967|emb|CAA20605.1| (AL031514)
putative sugar transport system permease protein
[Streptomyces coelicolor A3(2)]
Length = 293
Score = 81.9 bits (199), Expect = 1e-14
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 7/209 (3%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
N+ + L ++T T++ AYA R F ++ V+ +L+ T V + +A + +
Sbjct: 91 NTAFILLFSITGTVIIGSMTAYAIDRFDFRLKKLVMALFLIATLVPA---VTTQVATFQV 147
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
+ GLFN A L+Y + ++ +I I DEAA +DGA I R ++
Sbjct: 148 VNGFGLFNTRWAPILLYMGTDI-VAIYIFLQFIRGIPRSLDEAARLDGANSFTIYRKIIF 206
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGIDWNYFAAA 382
P+ P +ATV ++ I + +F + L + ++ +S ++ G G W +A
Sbjct: 207 PLLKPAVATVVIIKGITTYNDFYIPFLYMPDEDLGTMSTALFRFKGPF--GAHWENISAG 264
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+L +P V+F+ Q+YI +G G K
Sbjct: 265 AVLVIVPTLVIFLFLQRYIYNGFAQGATK 293
>pir||F83248 probable permease of ABC sugar transporter PA3188 [imported] -
Pseudomonas aeruginosa (strain PAO1)
>gi|9949306|gb|AAG06576.1|AE004742_12 (AE004742)
probable permease of ABC sugar transporter [Pseudomonas
aeruginosa]
Length = 281
Score = 81.9 bits (199), Expect = 1e-14
Identities = 59/212 (27%), Positives = 101/212 (46%), Gaps = 11/212 (5%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NS+++ + V ++ Y S +F G + L F + G + + L +
Sbjct: 76 NSVLITVPGVLISTFIGALNGYVLSMWRFRGSQ------LFFGALLFGCFLPFQVILLPM 129
Query: 264 ---MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRY 320
+ KLGL N L LV+ + F T ++Y +I +AA +DGA + I
Sbjct: 130 SFTLGKLGLANTTSGLVLVHVIYGLAFTTLFFRNYFVAIPDALVKAARLDGAGFFTIFLR 189
Query: 321 VLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGI-DWNYF 379
+LLPM+ P + + F W +F+ + +QP++V + L+ I G+ ++N
Sbjct: 190 ILLPMSTPIVMVCLIWQFTQIWNDFLFGVVFASGDSQPITVALNNLV-NITTGVKEYNVD 248
Query: 380 AAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
AA ++ ALP V+++LA KY GLT G +K
Sbjct: 249 MAAAMIAALPTLVVYVLAGKYFVRGLTAGAVK 280
>sp|Q9Z3R7|AGLG_RHIME ALPHA-GLUCOSIDES TRANSPORT SYSTEM PERMEASE PROTEIN AGLG
>gi|4210905|gb|AAD12048.1| (AF045609) AglG
[Sinorhizobium meliloti]
Length = 305
Score = 81.5 bits (198), Expect = 2e-14
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 6/212 (2%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALY-G 262
NSL +A+ + + +L AAYA + + F GR +L + V + + L+ LY G
Sbjct: 94 NSLTVAVPSTVIPILIAAFAAYALAWMPFPGRAVLLAVVVGLLVVPLQMSLIPLLQLYNG 153
Query: 263 IMVKLGLFNKL-PALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYV 321
+ G+ K + L + +P +LL++Y+ + + E+A +DGA+ I +
Sbjct: 154 VGAFFGVSAKTYMGIWLAHTGFGLPLAIYLLRNYMAGLPREIMESARVDGASDFDIFVKI 213
Query: 322 LLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVW--IYTLMGGIGRGIDWNYF 379
+LP++ P +A+ A+ F+ W + ++A + L + L + + L+G RG +W
Sbjct: 214 ILPLSFPALASFAIFQFLWTWNDLLVAIVFLGAGDDKLVLTGRLVNLLG--SRGGNWEIL 271
Query: 380 AAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A+ + + ++F Q+Y+ GL G +K
Sbjct: 272 TASAFITIVVPLIVFFALQRYLVRGLLAGSVK 303
>pir||G72357 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4981117|gb|AAD35683.1|AE001734_10
(AE001734) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 277
Score = 81.5 bits (198), Expect = 2e-14
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
N+ +A T L ++ AAYAFS + F GR+ + +L + G + L+ +
Sbjct: 76 NTFFVATTTTLLEVVTASLAAYAFSWMVFPGRDFIFGLFLATMMIPGEVL---LVPNFIT 132
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLL 323
+ KLG + AL + + F +LL+ + +I + +AA IDG ++ + + +++
Sbjct: 133 ISKLGWIDTYYALIIPWIVSV--FAIFLLRQHFLTIPRELFDAAKIDGCSHWRFLWQMVV 190
Query: 324 PMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTLMGGIGRGIDWNYFAAA 382
P++ P + T A++ F+G W F+ ++ + + L V + + G +N AA
Sbjct: 191 PLSKPAVITSALLKFVGSWNAFLWVLIVTNSEKYRTLPVGLQAFSSDV--GTQYNLLMAA 248
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
LPV ++F+ QKY G+ GLK
Sbjct: 249 ATFSILPVVILFIFTQKYFIQGIARTGLK 277
>pir||C69588 L-arabinose transport (integral membrane protein) araQ - Bacillus
subtilis >gi|1770021|emb|CAA99594.1| (Z75208)
hypothetical protein [Bacillus subtilis]
>gi|2635338|emb|CAB14833.1| (Z99118) integral membrane
protein [Bacillus subtilis]
Length = 281
Score = 81.1 bits (197), Expect = 2e-14
Identities = 56/217 (25%), Positives = 97/217 (43%), Gaps = 8/217 (3%)
Query: 196 SVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIA 255
S++F NSL+L L T LTL F Y + F GR + L+ V L +
Sbjct: 71 SIYFKWFFNSLVLGLFTTVLTLFFSSMIGYGLAVYDFKGRNIIFVLVLIIMMVP--LEVM 128
Query: 256 GLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
++ L+ + V L L + + L A P + + Y + D ++A +DG T
Sbjct: 129 -MLPLFKLTVGLHLIDSYTGVILPLIAS--PVAVFFFRQYALGLPRDLLDSARMDGCTEF 185
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGI 374
I ++ P+ P + ++ + W F+ ++L L + + +L+ G
Sbjct: 186 GIFFRIMAPLMKPAFGAMIILQSLNSWNNFLWPLIVLRSKEMFTLPIGLSSLLSPYGNNY 245
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
D + ++ LPV ++F+ QKY SGLT+GG+K
Sbjct: 246 DM--LISGSVFAILPVIIIFLFFQKYFISGLTVGGVK 280
>emb|CAA61936.1| (X89810) putative integral protein [Bacillus subtilis]
Length = 281
Score = 81.1 bits (197), Expect = 2e-14
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 8/217 (3%)
Query: 196 SVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIA 255
S++F NSL+L L T LTL F Y + F GR + L+ V L +
Sbjct: 71 SIYFKWFFNSLVLGLFTTVLTLFFSSMIGYGLAVYDFKGRNIIFVLVLIIMMVP--LEVM 128
Query: 256 GLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYL 315
++ L+ + V L L + + L + P + + Y + D ++A +DG T
Sbjct: 129 -MLPLFKLTVGLHLIDSYTGVILPFIVS--PVAVFFFRQYALGLPRDLLDSARMDGCTEF 185
Query: 316 QIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGI 374
I ++ P+ P + ++ + W F+ ++L L + + +L+ G
Sbjct: 186 GIFFRIMAPLMKPAFGAMIILQSLNSWNNFLWPLIVLRSKEMFTLPIGLSSLLSPYGNNY 245
Query: 375 DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
D + ++ LPV ++F+ QKY SGLT+GG+K
Sbjct: 246 DM--LISGSVFAILPVIIIFLFFQKYFISGLTVGGVK 280
>dbj|BAB05585.1| (AP001513) sugar transport system (permease) (binding protein
dependent transporter) [Bacillus halodurans]
Length = 285
Score = 80.8 bits (196), Expect = 3e-14
Identities = 55/212 (25%), Positives = 106/212 (49%), Gaps = 11/212 (5%)
Query: 203 KNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYG 262
+N++I+ + T + + AA+AF++L F GR+ L+F L+ T + G I L+ +
Sbjct: 81 RNTMIIIIPTTAIGIFTSSLAAFAFAKLNFPGRDK-LFFALIATMMLPG--IVTLVPQFI 137
Query: 263 IMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVL 322
+ +LG + L + G+ + L+ + +I D +AA IDG ++ I R ++
Sbjct: 138 LFRELGWLDTFKPLMIPGFFGAA-MTVFFLRQFFMTIPNDLIDAAKIDGLSFFGIFRKIM 196
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGI---DWNYF 379
+P+A P I T ++ + G+ +F+ + L N P + + ++ RG +W
Sbjct: 197 VPLAKPAIVTQVILGLLAGYNDFMGPLIYL---NSPENFTLQLVLASF-RGYYTSEWGLI 252
Query: 380 AAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A +++ +P V F AQK G+ + G+K
Sbjct: 253 MAGSVIALIPTLVAFFFAQKQFIEGIVMTGVK 284
>dbj|BAB05645.1| (AP001513) sugar transport system (permease) [Bacillus halodurans]
Length = 285
Score = 80.8 bits (196), Expect = 3e-14
Identities = 61/232 (26%), Positives = 115/232 (49%), Gaps = 10/232 (4%)
Query: 183 GEAKLTNLGKFVNSV-FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYF 241
G + N K ++++ FF + NSL+++ TL A YAF++L F G+ + F
Sbjct: 60 GRDLVNNFQKVLDNIDFFGAMWNSLVVSTSVTIGTLFLCSLAGYAFAKLAFKGKNVLFVF 119
Query: 242 YLMFTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYI-DSIN 300
L+ V LG LI Y I+ +LG N A+ + + F + ++ YI + +
Sbjct: 120 ILITMMVPPQLG---LIPQYYIITELGWLNDYRAIIVPGLINA--FGIFWMRQYIKEGVP 174
Query: 301 PDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPL 359
+ EAA +DG + +I +++PM LP AT+ ++ F+ W +F+ ++L + + L
Sbjct: 175 TELIEAARMDGCSTFRIYWNIVVPMILPAFATLGIIVFMQVWNDFLWPLVVLRDPSMHTL 234
Query: 360 SVWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
V + +L R +D+ + T +P+ ++F+L + L+ G +K
Sbjct: 235 QVALRSL--NDARQMDYGMIMSGTFWATVPLIIVFLLFNRLFIDSLSEGAVK 284
>sp|Q00751|MSMG_STRMU MULTIPLE SUGAR-BINDING TRANSPORT SYSTEM PERMEASE PROTEIN MSMG
>gi|282319|pir||D42400 membrane protein MsmG -
Streptococcus mutans >gi|153739|gb|AAA26936.1| (M77351)
membrane protein [Streptococcus mutans]
Length = 277
Score = 80.4 bits (195), Expect = 4e-14
Identities = 61/215 (28%), Positives = 112/215 (51%), Gaps = 15/215 (6%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NS ++ +L+V + +LF+ AAY+ +R F +M++ + G+ + + + I
Sbjct: 71 NSTVITVLSVLVVMLFIPAAAYSIAR----NMSRRKAFNIMYSLLILGIFVPFQVIMIPI 126
Query: 264 MV---KLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPD-FDEAALIDGATYLQIIR 319
V KLGL N + L ++Y ++P +L YI PD DEAA IDGA L R
Sbjct: 127 TVMMSKLGLAN-MWGLIILYLTYAIPQTLFLYVGYIKLSVPDSLDEAAEIDGADKLTTYR 185
Query: 320 YVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYF 379
++ PM P AT +++ + W +F+L L+L N+ S+W L G +N +
Sbjct: 186 KIIFPMLKPMHATTLIINALWFWNDFMLPLLIL---NKDSSMWTLPLFQYNYSGQYFNDY 242
Query: 380 A---AATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A+ ++ + + +++++ QK+I +G++ G +K
Sbjct: 243 GPSFASYIVGIITITIVYLIFQKHIIAGMSNGAVK 277
>sp|P37729|AMYC_THETU POTENTIAL STARCH DEGRADATION PRODUCTS TRANSPORT SYSTEM PERMEASE
PROTEIN AMYC >gi|481066|pir||S37705 amyC protein -
Thermoanaerobacterium thermosulfurigenes
>gi|565384|gb|AAB00844.1| (M57692) membrane protein for
maltose transport [Thermoanaerobacterium
thermosulfurigenes] >gi|228283|prf||1802282B sugar
transport protein [Thermoanaerobacterium
thermosulfurigenes]
Length = 274
Score = 80.0 bits (194), Expect = 5e-14
Identities = 58/216 (26%), Positives = 104/216 (47%), Gaps = 19/216 (8%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
N+LI+ + ++ + +F AYA R+K R+ + Y++FT +A LI +
Sbjct: 71 NTLIITVFSILIIAIFSSMTAYALQRVK---RKSSVIIYMIFT-------VAMLIPFQSV 120
Query: 264 MVKL----GLFNKLPALALV--YAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
M+ L G F+ L LV Y +L + I DEAALIDG + +I
Sbjct: 121 MIPLVAEFGKFHFLTRSGLVFMYLGFGSSLGVFLYYGALKGIPTSLDEAALIDGCSRFRI 180
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQ-ANQPLSVWIYTLMGGIGRGIDW 376
++LP+ P T+AV+ + W +++L SL++ + ++ L + I+ + W
Sbjct: 181 YWNIILPLLNPTTITLAVLDIMWIWNDYLLPSLVINKVGSRTLPLMIFYFFSQYTK--QW 238
Query: 377 NYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
N A + LPV + + LAQ+ + + + G +K+
Sbjct: 239 NLGMAGLTIAILPVVIFYFLAQRKLVTAIIAGAVKQ 274
>sp|P53561|YTCP_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN IN OPUD-BIOI INTERGENIC
REGION (ORF3) >gi|7442802|pir||G69989 ABC transporter
(permease) homolog ytcP - Bacillus subtilis
>gi|2293190|gb|AAC00268.1| (AF008220) transporter
[Bacillus subtilis] >gi|2635501|emb|CAB14995.1| (Z99119)
similar to ABC transporter (permease) [Bacillus
subtilis]
Length = 286
Score = 80.0 bits (194), Expect = 5e-14
Identities = 60/233 (25%), Positives = 111/233 (46%), Gaps = 21/233 (9%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F + + L S+ + ++ +++ AY SR GR+ ++ F ++FT + G
Sbjct: 60 FSTDIIYKSLLVSVFVTVIGTAVSMFLSSLMAYGLSRRDLIGRQPLM-FLVVFTMLFSG- 117
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
G+I + ++ LGL + AL L A + FN +LK++ +I +E+A IDG
Sbjct: 118 ---GMIPTFLVVKSLGLLDSYWALILPTAINA--FNLIILKNFFQNIPSSLEESAKIDGC 172
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWIYTL----- 366
L I ++LP++LP IAT+++ + W ++ A L L + A P+ V + +
Sbjct: 173 NDLGIFFKIVLPLSLPAIATISLFYAVTYWNTYMTAILYLNDSAKWPIQVLLRQIVIVSS 232
Query: 367 -----MGGIGRGI---DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
M +G G + A ++ +PV +++ QK+ G LG +K
Sbjct: 233 GMQGDMSEMGSGSPPPEQTIKMAVIVVATIPVLLVYPFIQKHFAKGALLGSVK 285
>pir||T30595 sugar transport homolog - Amycolatopsis orientalis
>gi|2894178|emb|CAA11785.1| (AJ223998) PCZA361.28
[Amycolatopsis orientalis]
Length = 132
Score = 80.0 bits (194), Expect = 5e-14
Identities = 39/128 (30%), Positives = 72/128 (55%), Gaps = 1/128 (0%)
Query: 285 VPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTE 344
+PF +++++ +++ + DEAAL+DG L+++ VLLP +PG+ TV + +F+ W E
Sbjct: 4 LPFALFMMRNSFEAVPRELDEAALVDGCGPLRVLWSVLLPAVVPGMVTVGLFAFLASWNE 63
Query: 345 FILASLLLEQANQ-PLSVWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRS 403
FI + L ++ L + + G ID+ A ++ A+P ++FML Q++
Sbjct: 64 FIAPLIFLSDGDKFTLPTALAAMRSGNFGAIDYGALQAGIVVSAIPCMILFMLLQRHYVR 123
Query: 404 GLTLGGLK 411
G + G LK
Sbjct: 124 GFSSGALK 131
>pir||F70943 hypothetical protein Rv2039c - Mycobacterium tuberculosis (strain
H37RV) >gi|2896776|emb|CAA17253.1| (AL021899)
hypothetical protein Rv2039c [Mycobacterium
tuberculosis]
Length = 280
Score = 80.0 bits (194), Expect = 5e-14
Identities = 55/215 (25%), Positives = 111/215 (51%), Gaps = 9/215 (4%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGL 257
F+ N+++ A + F A YAF+RL+F GR+ + YL V + +
Sbjct: 71 FWRMFFNTVLYAGCVTAGQVFFCSLAGYAFARLQFRGRDTLFVLYLSTLMVPLTVTVIPQ 130
Query: 258 IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQI 317
+ L I+ G + A+ + GS F T+L++ + ++ D +EAA++DG + QI
Sbjct: 131 VILMRIV---GWVDTPWAMIVPGLFGSA-FGTYLMRQFFRTLPTDLEEAAILDGCSPWQI 186
Query: 318 IRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGG-IGRGID 375
+LLP + P + + V++++ W +F+ L++++ + L++ + L G + R
Sbjct: 187 YWRILLPHSRPAVLVLGVLTWVNVWNDFLWPLLMIQRNSLATLTLGLVRLRGEYVAR--- 243
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGL 410
W AA++L +P+ +++ +AQ+ G+ + GL
Sbjct: 244 WPVLMAASMLMLVPLVILYAVAQRSFVRGIAVTGL 278
>dbj|BAA28361.1| (D85027) integral membrane protein [Thermus sp. A4]
Length = 247
Score = 80.0 bits (194), Expect = 5e-14
Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 7/244 (2%)
Query: 169 EISGVLRPIIVRNKGEAKLTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFS 228
EI V P++ N L NL ++ FF L NSL+++ L LL A YA +
Sbjct: 11 EIFRVPTPLLPGNAFWENLRNLQ--ADTDFFRALWNSLVVSGLYTVGGLLLSALAGYALA 68
Query: 229 RLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFN 288
+F G+ L+F L+ + + + + +L L N + L + A ++
Sbjct: 69 VYRFRGQ--ALFFSLIVATLTIPYFVVVIPQYILVARELKLTNTYWGVVLPFLANAL--G 124
Query: 289 TWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILA 348
+ ++ S+ P +AA +DGA+ +I + LP+ P +A +A++ F+ W +++
Sbjct: 125 VFYMRQVFLSLPPSLLDAARVDGASEARIFFRIALPVVTPSLAALALILFLTAWNDYLWP 184
Query: 349 SLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLG 408
L+L Q + + G+ R + W ++L P V+F+ Q+Y +G+T G
Sbjct: 185 LLVLSQKEMYTAPVALGTLIGLTR-VSWGGIMVGSVLMTAPFVVLFLFLQRYFVAGITAG 243
Query: 409 GLKE 412
+KE
Sbjct: 244 AVKE 247
>sp|O31520|YESQ_BACSU PROBABLE ABC TRANSPORTER PERMEASE PROTEIN YESQ
>gi|7442793|pir||H69796 lactose permease homolog yesQ -
Bacillus subtilis >gi|2633012|emb|CAB12518.1| (Z99107)
similar to lactose permease [Bacillus subtilis]
Length = 296
Score = 79.6 bits (193), Expect = 6e-14
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 16/260 (6%)
Query: 156 IKDAKVSGSINGNEISGVLRPIIVRNKGEAKLTNLGKFVNSVFFHHLKNSLILALLTVTL 215
+ K S SI S + P I+ N E G+ F +KNS I+ L+
Sbjct: 49 VSSFKESASIFTTSHSLIPDPFILSNYAEGWKGIAGQ----PFLTFIKNSAIIVGLSTIG 104
Query: 216 TLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAG---LIALYGIMVKLGLFNK 272
++ AY F+R+ F G++ F + G L + +I Y + KL N
Sbjct: 105 AVMSSAVIAYGFARIPFKGKK------FWFACMMGTLMLPHEVLMIPQYIMFAKLDWLNS 158
Query: 273 LPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLLPMALPGIAT 332
+ + G F +L+ +I +I + DEAA IDG ++LP+ P +AT
Sbjct: 159 FKPIVVPQFFGHA-FFIFLMIQFIRTIPEELDEAARIDGCGRFACFWRIILPLIAPALAT 217
Query: 333 VAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDWNYFAAATLLFALPVF 391
A+ SF W E I L L + P+S+ + L +W A + + LPV
Sbjct: 218 SAIFSFYWKWEELIQPLLYLNKPELYPVSLAL-KLFLDTESASNWGAMFAMSAVSLLPVI 276
Query: 392 VMFMLAQKYIRSGLTLGGLK 411
++F L QKYI G++ GLK
Sbjct: 277 LVFFLFQKYIVQGISTTGLK 296
>pir||B27626 hypothetical protein 1 - Streptococcus mutans (fragment)
Length = 207
Score = 79.2 bits (192), Expect = 8e-14
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 15/215 (6%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NS ++ +L+V + +LF+ AAY+ +R F +M++ + G+ + + + I
Sbjct: 1 NSTVITVLSVLVVMLFIPAAAYSIAR----NMSRRKAFNIMYSLLILGIFVPFQVIMIPI 56
Query: 264 MV---KLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPD-FDEAALIDGATYLQIIR 319
V KLGL N + L ++Y ++P +L YI PD DEAA IDGA L R
Sbjct: 57 TVMMSKLGLAN-MWGLIILYLTYAIPQTLFLYVGYIKLSVPDSLDEAAEIDGADKLTTYR 115
Query: 320 YVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYF 379
+ PM P AT +++ + W +F+L L+L N+ S+W L G +N +
Sbjct: 116 KITFPMLKPMHATTLIINALWFWNDFMLPLLIL---NKDSSMWTLPLFQYNYSGQYFNDY 172
Query: 380 A---AATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A+ ++ + + +++++ QK+I +G++ G +K
Sbjct: 173 GPSFASYIVGIITITIVYLIFQKHIIAGMSNGAVK 207
>emb|CAB76328.1| (AL158061) putative binding-protein dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 316
Score = 78.8 bits (191), Expect = 1e-13
Identities = 65/235 (27%), Positives = 107/235 (44%), Gaps = 18/235 (7%)
Query: 187 LTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFT 246
+T + + VF L N+L+ L V YA ++ F GR V F
Sbjct: 91 ITETFTYDDGVFTRWLLNTLLYVGLGAGGATFLAVLGGYALAKFDFPGRRSV------FA 144
Query: 247 QVAGGLGIAGL---IALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYI-DSINPD 302
V G + + G + + + K+GL N A++ + PF +L+ + ++I +
Sbjct: 145 VVIGAVAVPGTALAVPTFLMFSKMGLTNT--PWAVIIPSLISPFGLYLMWVFATEAIPTE 202
Query: 303 FDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSV 361
EAA IDGA L+ V LP+ PGI TV + + + W + L ++L+ + PL++
Sbjct: 203 LMEAARIDGAGELRTFFRVALPLLAPGIVTVLLFTMVATWNNYFLPLVMLKDPDWYPLTL 262
Query: 362 ----WIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
W G + +N +L+ LP+ F+L QKY +SGL G +KE
Sbjct: 263 GLNSWNQQAATAGGEAV-FNLVVTGSLITILPLIAAFLLLQKYWQSGLAAGSVKE 316
>dbj|BAB05943.1| (AP001514) maltose transport system (permease) [Bacillus
halodurans]
Length = 276
Score = 78.8 bits (191), Expect = 1e-13
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
N+ ++ L +LF AAY +R + VL F++ V + L+ LY +
Sbjct: 71 NTGLITAGAAVLLILFGSMAAYPLARRETKLNRFVLLFFVAIMVVPP---LTALVPLYQM 127
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINP-DFDEAALIDGATYLQIIRYVL 322
+V LG+ N L A +P +L +I S P + +EAA IDG + I ++
Sbjct: 128 VVNLGMLNTRTIAILNNLAAFLPLTIFLYAGFIRSTIPKELEEAAKIDGCNTISIFFRIV 187
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLMGGIGRGIDWNYFAA 381
P+ P A+V ++S + W ++ A L+ + L+V + + G + N AA
Sbjct: 188 FPLLKPVTASVLIISCVFIWNDYQFAIFFLQSKDVHTLTVALASFFGENQSNL--NLVAA 245
Query: 382 ATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A + LP+ ++F+ QKY +GL+ G +K
Sbjct: 246 AAFMAMLPMTILFLFLQKYFIAGLSSGSVK 275
>emb|CAC01654.1| (AL391072) putative sugar-binding integral membrane transport
protein [Streptomyces coelicolor A3(2)]
Length = 303
Score = 78.4 bits (190), Expect = 1e-13
Identities = 57/212 (26%), Positives = 100/212 (46%), Gaps = 13/212 (6%)
Query: 205 SLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGIM 264
+L+ LL L+LL P +Y +R +L ++ T V + LI + ++
Sbjct: 99 TLLFVLLVNVLSLLVSAPVSYVIARGTTRWHTALLLLFVAGTFVPSQVL---LIPVVYVL 155
Query: 265 VKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIRYVLLP 324
LGL +P L A ++P + +L +YI +I + D+AA +DG L+ + V+LP
Sbjct: 156 KYLGLMGTVPGFVLFETALTLPVSVFLYSAYIRTIPRELDQAASVDGLGRLRTFQLVVLP 215
Query: 325 MALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGID--WNYFAAA 382
+ P +AT ++ + W +F ++L + +YT+ G+ + ++A
Sbjct: 216 LMRPMVATAVILHSLSVWNDFANPQIILGPGS-----GLYTVTTGVYAAVGKYSTHYAVV 270
Query: 383 ---TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
LL P F + Q++I SGLT G LK
Sbjct: 271 FPNLLLAVAPALAFFAIMQRHIISGLTSGALK 302
>emb|CAB88163.1| (AL352956) putative binding-protein-dependent transport protein.
[Streptomyces coelicolor A3(2)]
Length = 272
Score = 78.0 bits (189), Expect = 2e-13
Identities = 55/222 (24%), Positives = 109/222 (48%), Gaps = 10/222 (4%)
Query: 187 LTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFT 246
L N +S F + N+L++ + + LL V P AYA R + + +L+
Sbjct: 52 LDNFTGAFDSGFGQYFFNTLVVTACVIGIVLLLVPPLAYAIVRSRGRATSAIFRLFLL-- 109
Query: 247 QVAGGLGI---AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDF 303
GL I A ++ ++ ++ + GL++ L + L AA +P + +L + I+P+
Sbjct: 110 ----GLAIPAQAVIVPMFYLISEAGLYDNLLGVILPTAAFCLPMSALILSGSMRDISPEL 165
Query: 304 DEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWI 363
EA +DGA+ ++ +++P++ G++T+ V S + W F L L+L Q++ V +
Sbjct: 166 YEAMAMDGASPRRMFFQLVMPLSRGGLSTIVVFSALQAWNGF-LFPLVLTQSDSTKVVTL 224
Query: 364 YTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGL 405
GID A +L +P+ ++++ A++ + GL
Sbjct: 225 GLYNFQTAHGIDIPGLLGAVVLSMVPILLVYLFARRALVQGL 266
>gb|AAC99627.1| (AF043654) BxlG [Streptomyces lividans]
Length = 272
Score = 77.6 bits (188), Expect = 2e-13
Identities = 55/222 (24%), Positives = 109/222 (48%), Gaps = 10/222 (4%)
Query: 187 LTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFT 246
L N +S F + N+L++ + + LL V P AYA R + + +L+
Sbjct: 52 LDNFTGAFDSGFGQYFFNTLVVTACVIGIVLLLVPPLAYAIVRSRGRATSAIFRLFLL-- 109
Query: 247 QVAGGLGI---AGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDF 303
GL I A ++ ++ ++ + GL++ L + L AA +P + +L + I+P+
Sbjct: 110 ----GLAIPAQAVIVPMFYLISEAGLYDNLLGVILPRAAFCLPMSALILSGSMRDISPEL 165
Query: 304 DEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWI 363
EA +DGA+ ++ +++P++ G++T+ V S + W F L L+L Q++ V +
Sbjct: 166 YEAMAMDGASLRRMFFQLVMPLSRGGLSTIVVFSALQAWNGF-LFPLVLTQSDFTKVVTL 224
Query: 364 YTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGL 405
GID A +L +P+ ++++ A++ + GL
Sbjct: 225 GLYNFQTAHGIDIPGLLGAVVLSMVPILLVYLFARRALVQGL 266
>pir||F72203 sugar ABC transporter, permease protein - Thermotoga maritima
(strain MSB8) >gi|4982437|gb|AAD36915.1|AE001822_8
(AE001822) sugar ABC transporter, permease protein
[Thermotoga maritima]
Length = 273
Score = 77.6 bits (188), Expect = 2e-13
Identities = 60/212 (28%), Positives = 111/212 (52%), Gaps = 10/212 (4%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPA-AYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAG 256
F NSL + L TVT +++F AY S+L+F G V F + G + I
Sbjct: 67 FLRAFFNSLFVTL-TVTFSVVFTSSIIAYGLSKLRFKGSNAVFNFIIFQMLFPGFMFI-- 123
Query: 257 LIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQ 316
I L+ ++ KLGL+N A+ + + + ++ ++L +I D+ EAA IDGA+ L
Sbjct: 124 -IPLFVLIRKLGLYNTYSAMIVPFLMSA--WSLFMLTQSYKTIPQDYIEAAKIDGASTLW 180
Query: 317 IIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTLMGGIGRGID 375
II V++P++ ++ V + +FIG W F+ ++++ N+ PLSV + T +
Sbjct: 181 IIFRVMVPLSRSTLSIVGLFTFIGIWDNFLWPLMVVKDYNKMPLSVLLATFNHEYAAYV- 239
Query: 376 WNYFAAATLLFALPVFVMFMLAQKYIRSGLTL 407
A +++ LP+ ++F++ +K G+++
Sbjct: 240 -GPLMAGSVIQTLPMVLIFLIFRKQFLQGISM 270
>pir||T46604 ABC-type transport system permease protein cebG [validated] -
Streptomyces reticuli >gi|5327253|emb|CAB46344.1|
(AJ009797) CEBG protein [Streptomyces reticuli]
Length = 276
Score = 77.6 bits (188), Expect = 2e-13
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 204 NSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGI 263
NS+I+A T+LF A +AF++L+F +L + + L + + LY
Sbjct: 74 NSVIVAGTITVSTVLFSTLAGFAFAKLRFRFSGLLLLLTIGTMMIPPQLAV---VPLYLW 130
Query: 264 MVKLGLFNKLPALALVYAAGSVPFNTWLLKSY-IDSINPDFDEAALIDGATYLQIIRYVL 322
M LG N+L + L + F T+ ++ Y + ++ + EAA +DGA+ L+I+ +V+
Sbjct: 131 MSDLGWSNQLHTVILPSLVTA--FGTFFMRQYLVQALPTELIEAARVDGASSLRIVWHVV 188
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAA 382
P A P +A + +++F+ W +F+ + L Q N + V + D A
Sbjct: 189 FPAARPAMAVLGLLTFVFAWNDFLWPIIALNQQNPTVQVGPELARHRVLP--DQAVIMAG 246
Query: 383 TLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
LL LP+ V F+L K I G+ G +K
Sbjct: 247 ALLGTLPLLVAFLLFGKQIVGGIMQGAIK 275
>dbj|BAB04797.1| (AP001510) glycerol-3-phosphate ABC transporter (permease)
[Bacillus halodurans]
Length = 270
Score = 76.9 bits (186), Expect = 4e-13
Identities = 53/213 (24%), Positives = 101/213 (46%), Gaps = 7/213 (3%)
Query: 200 HHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIA 259
H+L+NS I+++ + L+ +AY F+ + F GR V ++ + A +I
Sbjct: 64 HYLQNSFIVSITVMIGQLIVCSLSAYVFAFIPFKGRTFVFLLFISTLMIPWE---AAMIP 120
Query: 260 LYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGATYLQIIR 319
+ + KLG N + + + A + F T+LL+ + +I + EAA ++G + Q
Sbjct: 121 NFLTIQKLGWLNSYLGMTVPFFA--LAFGTFLLRQHFKTIPKELHEAAQVEGLSPFQFFY 178
Query: 320 YVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWI-YTLMGGIGRGIDWNY 378
V LP A + T+ + F+ W + L LL+ ++ +V I + + +W
Sbjct: 179 KVCLPYAKTSLVTLGIYGFLTTWNMY-LWPLLVTTNDRKRTVQIGLKQLQTVEVATEWGV 237
Query: 379 FAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
A ++ +P ++ L QK ++ GLT G +K
Sbjct: 238 VMAGVVVVIIPTLLLLFLGQKQLQKGLTQGAIK 270
>dbj|BAB04200.1| (AP001508) ABC transporter (permiase) [Bacillus halodurans]
Length = 293
Score = 76.5 bits (185), Expect = 5e-13
Identities = 58/234 (24%), Positives = 109/234 (45%), Gaps = 22/234 (9%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F + F L S+++ ++ ++ AY SR GR VL F ++FT + G
Sbjct: 66 FSTDIIFRSLIISILVTVVGTGFSMFLTSLMAYGLSRKDLDGRR-VLMFLVVFTMLFSG- 123
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
G+I + ++ LGL + AL + A + FN +LK++ +I +E+A IDG
Sbjct: 124 ---GMIPTFLVVRSLGLLDTYWALIIPTAINA--FNLIILKNFFQNIPESLEESAKIDGC 178
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQ-PLSVWIYTL----- 366
+ I ++ P+++P IAT+++ + W F+ A L L ++ P+ V + +
Sbjct: 179 NDVGIFFRIVFPLSMPAIATISLFYAVTYWNTFMQAILYLNDSSMWPIQVLLRQIVIMSS 238
Query: 367 -----MGGIGRGI----DWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ +G G + A ++ +PV +++ QK+ G LG +K
Sbjct: 239 GMQGDLTELGAGFVMPPEQTIKMAVIVVATIPVLIVYPFIQKHFAKGALLGSVK 292
>dbj|BAB04514.1| (AP001509) sugar transport system (permease) (binding protein
dependent transporter) [Bacillus halodurans]
Length = 322
Score = 76.5 bits (185), Expect = 5e-13
Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 37/231 (16%)
Query: 205 SLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGLGIAGLIALYGIM 264
+++ L++V++ L+ AYA SR +F R+ + F FT + G G++ Y +M
Sbjct: 106 TVVGTLMSVSIIALY----AYAISRKQFLYRK-LFTFIAFFTMLFSG----GMVPFYIVM 156
Query: 265 VK-LGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPD-FDEAALIDGATYLQIIRYVL 322
+ LGL N + AL L A + F +++++ P+ E+A IDGA +I ++
Sbjct: 157 TQFLGLKNSVWALILPMAVNA--FYIIIMRTFFQRSVPEAILESARIDGAGEFRIFFKIV 214
Query: 323 LPMALPGIATVAVMSFIGGWTEFILASLLLEQANQPLSVWIYTLMGGIGRGIDW------ 376
LP+++PGIAT+A+ S + W ++ A L ++ P V + +L+ I +D+
Sbjct: 215 LPLSIPGIATIALFSTLAYWNDWFNALLFID---DPKLVPLQSLLMRIENNLDFIRQNAM 271
Query: 377 ---------------NYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLKE 412
+ A ++ LP+ + + QKY GLT+GG+KE
Sbjct: 272 LSSQNSALLDSIPQDSARMAMVVIATLPIALSYPFFQKYFVKGLTIGGVKE 322
>sp|P39129|LPLC_BACSU LPLC PROTEIN >gi|7442828|pir||B69653 transmembrane lipoprotein lplC
- Bacillus subtilis >gi|450566|gb|AAA22576.1| (L19164)
transmembrane protein [Bacillus subtilis]
>gi|2633025|emb|CAB12531.1| (Z99107) transmembrane
lipoprotein [Bacillus subtilis]
Length = 295
Score = 72.2 bits (174), Expect = 1e-11
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F F + S+ + ++ + L F AY ++ GR ++L ++F+ + G
Sbjct: 70 FSTPTFLRSMGVSIFITVVGTAVQLFFTFTMAYPLAKRHVKGR-NLLLNLVIFSMLFSG- 127
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
G+I Y ++ LGL + AL L A PFN ++K++ + + +E+A IDG
Sbjct: 128 ---GMIPTYLVVKSLGLLDTYWALILPMAIN--PFNLIIIKNFFQQLPRELEESAKIDGC 182
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSVWI--YTLMGG 369
+ + + + LP++ P IAT A+ +G W +F A L + + A PL + + T++
Sbjct: 183 SEIGVFWRIALPLSKPVIATFALFYAVGIWNDFFHALLYINDSAKWPLQMVLRQVTILSD 242
Query: 370 I--------------GRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
+ +GI A ++ LP+ ++ QK+ G+ +G +K
Sbjct: 243 LTATNGDTMQNAVPPEQGIK----LAVIVIATLPILAVYPFLQKHFAKGMLIGSVK 294
>pir||T36086 probable binding protein dependent transport protein - Streptomyces
coelicolor >gi|4678629|emb|CAB41202.1| (AL049661)
putative binding protein dependent transport protein
[Streptomyces coelicolor A3(2)]
Length = 279
Score = 72.2 bits (174), Expect = 1e-11
Identities = 59/224 (26%), Positives = 96/224 (42%), Gaps = 12/224 (5%)
Query: 198 FFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLM------FTQVAGG 251
F + +NSL ++L L L A YA +R+ F G + L +T++
Sbjct: 58 FGTYFRNSLFISLGHTALNLALASMAGYALARIPFRGSTVIFMGVLATMMIPTYTKIVPQ 117
Query: 252 LGIAGLIALYGIMVKLGLFNK--LPAL-ALVYAAGSVPFNTWLLKSYIDSINPDFDEAAL 308
IA I +G LG L + L+ PF +L + + S+ + +EAA
Sbjct: 118 YLIAKGIPFFGGNDYLGRGGHGWLDSWWGLIIPGALTPFAIFLFRQFYLSLPRELEEAAR 177
Query: 309 IDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQAN-QPLSVWIYTLM 367
IDG I V+ P+ P IATV +++F W F+ ++ + + + V +
Sbjct: 178 IDGMGEFGIYARVMTPLVKPAIATVGLLTFESSWNNFLWPLIITTDTDLRVIQVGLSAFQ 237
Query: 368 GGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
W Y A T L +P+ +F+LAQ+Y G G+K
Sbjct: 238 QADQNA--WAYMMAGTTLATIPMVALFLLAQRYFVQGFANSGIK 279
>pir||A56641 probable membrane transport protein - Clostridium perfringens
>gi|296356|emb|CAA46887.1| (X66092) putative membrane
transport protein [Clostridium perfringens]
Length = 275
Score = 71.8 bits (173), Expect = 1e-11
Identities = 56/238 (23%), Positives = 114/238 (47%), Gaps = 16/238 (6%)
Query: 175 RPIIVRNKGEAKLTNLGKFVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFG 234
+P+ ++L GKF N++I+ + V ++ F AAYAF+RL F G
Sbjct: 52 KPMYENYSEVSRLLPFGKFY--------MNTIIMLIFRVVGSVFFSAMAAYAFARLNFPG 103
Query: 235 REHVLYFYLMFTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKS 294
++ ++F L+ Q+ I ++ + ++ KLGL N + AL + + F T+LL+
Sbjct: 104 KK--IFFALVLFQMMIPAQIF-IVPQFLLVQKLGLLNTISALVIPGIVSA--FGTFLLRQ 158
Query: 295 YIDSINPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLL-LE 353
+ + + +EAA +DG Q V+LP+A G+ + + + + + + + ++ +
Sbjct: 159 FFMGLPKELEEAAKLDGCNTWQTFYKVMLPLARSGLVALGIFTALFAFKDLMWPLVVNMS 218
Query: 354 QANQPLSVWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTLGGLK 411
LS + +L G ++ A ++L P+ ++F++ Q+ G+ G K
Sbjct: 219 VDKMTLSAGLASLQGQF--STNYPQLMAGSVLAIWPMLIIFVIFQRKFIEGIATSGSK 274
>gb|AAB17464.1| (U51868) unknown [Bacillus subtilis]
Length = 260
Score = 71.8 bits (173), Expect = 1e-11
Identities = 48/170 (28%), Positives = 87/170 (50%), Gaps = 8/170 (4%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F + + L S+ + ++ +++ AY SR GR+ ++ F ++FT + G
Sbjct: 67 FSTDIIYKSLLVSVFVTVIGTAVSMFLSSLMAYGLSRRDLIGRQPLM-FLVVFTMLFSG- 124
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
G+I + ++ LGL + AL L A + FN +LK++ +I +E+A IDG
Sbjct: 125 ---GMIPTFLVVKSLGLLDSYWALILPTAINA--FNLIILKNFFQNIPSSLEESAKIDGC 179
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLL-EQANQPLSV 361
L I ++LP++LP IAT+++ + W ++ A L L + A P+ V
Sbjct: 180 NDLGIFFKIVLPLSLPAIATISLFYAVTYWNTYMTAILYLNDSAKWPIQV 229
>gb|AAC98127.1| (AF098273) integral membrane protein [Bacillus stearothermophilus]
Length = 296
Score = 69.9 bits (168), Expect = 5e-11
Identities = 55/193 (28%), Positives = 95/193 (48%), Gaps = 29/193 (15%)
Query: 239 LYFYL-MFTQVAGGLGIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYI- 296
LY ++ +FT + G GL+ Y ++ KLGL + + AL L A + FN LL ++
Sbjct: 114 LYMWIFVFTMLFHG----GLVPTYMVVTKLGLTDTIWALILPPAVSA--FNLILLVNFFR 167
Query: 297 DSINPDFDEAALIDGATYLQIIRYVLLPMALPGIATVAVMSFIGGWTEF----------- 345
S+ +EAAL+DGA + I + LP+++P IAT+++ + + W +
Sbjct: 168 TSVPKSLEEAALMDGANHFTIFWKIYLPISVPAIATISLFTMVFHWNSWFDGLIYMSDVK 227
Query: 346 ------ILASLLLEQANQPLSVWIYTLMGGIGRGIDWNYFAAATLLFALPVFVMFMLAQK 399
L +++++Q +SV TL R + AA + ALP+ +++ QK
Sbjct: 228 HYPLSSFLQTIIVQQDFTKMSVDAETLKNLSERTVK----AAQIFIAALPMLIVYPFVQK 283
Query: 400 YIRSGLTLGGLKE 412
+ G+ LG KE
Sbjct: 284 FFVKGIVLGAEKE 296
>dbj|BAB05832.1| (AP001514) ABC transporter (permease) [Bacillus halodurans]
Length = 308
Score = 69.5 bits (167), Expect = 7e-11
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 34/244 (13%)
Query: 193 FVNSVFFHHLKNSLILALLTVTLTLLFVVPAAYAFSRLKFFGREHVLYFYLMFTQVAGGL 252
F S H S++ ++ +++ AY SR +F ++ V +++ + GGL
Sbjct: 73 FSQSQLLHAGMISVLRTVIGTAISVFCTAMVAYTISRKQFVLKKFVTIAFVLTMYLNGGL 132
Query: 253 GIAGLIALYGIMVKLGLFNKLPALALVYAAGSVPFNTWLLKSYIDSINPDFDEAALIDGA 312
I Y +M +L L + G FN +++S+I+ + E+A IDGA
Sbjct: 133 -----IPTYLLMRELSLIGTFWIYIIPGLIGV--FNLIVIRSFIEGLPETIFESAKIDGA 185
Query: 313 TYLQIIRYVLLPMALPGIATVAVMSFIGGWTEFILASLLLEQANQP-LSVWIYTLM---- 367
+ LP+ LP IATV++ +G W + + + +N+P LS Y LM
Sbjct: 186 GEFTQFFKIALPLCLPVIATVSLFVAVGQWNSWF--DVFIYNSNKPELSTLQYELMKILQ 243
Query: 368 --------------------GGIGRGIDWNYFAAATLLFALPVFVMFMLAQKYIRSGLTL 407
G + + AA T++ ++P+ ++ QKY GLTL
Sbjct: 244 NSNASMSSGSAASAFASSQSGVVETVTPQSVRAAMTIIVSVPIICVYPFLQKYFVKGLTL 303
Query: 408 GGLK 411
GG+K
Sbjct: 304 GGVK 307
Database: ./suso.pep
Posted date: Jul 6, 2001 5:57 PM
Number of letters in database: 840,471
Number of sequences in database: 2977
Database: /banques/blast2/nr.pep
Posted date: Dec 14, 2000 12:46 PM
Number of letters in database: 188,266,275
Number of sequences in database: 595,510
Lambda K H
0.327 0.145 0.420
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142442971
Number of Sequences: 2977
Number of extensions: 6066101
Number of successful extensions: 22988
Number of sequences better than 1.0e-10: 135
Number of HSP's better than 0.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 22653
Number of HSP's gapped (non-prelim): 200
length of query: 412
length of database: 189,106,746
effective HSP length: 54
effective length of query: 358
effective length of database: 156,788,448
effective search space: 56130264384
effective search space used: 56130264384
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 166 (69.1 bits)